View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453A_low_539 (Length: 230)
Name: NF11453A_low_539
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453A_low_539 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 41906530 - 41906744
Alignment:
| Q |
1 |
acatggttattgaaaagagacatcaaaatagaagccaaacctgactgaaagatagtttgtgtcctttatcttggctgatggaatatgaacaaaagatatg |
100 |
Q |
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| T |
41906530 |
acatggttattgaaaagagacatcaaaatagaagccaaacctgactgaaagatagtttgtgtcctttatcttggctgatggaatatgaacaaaagatatg |
41906629 |
T |
|
| Q |
101 |
accttgtggtaagtgtatgaacgaaaatatttcagatttataagctcttggagacgtgaaaatcgttattatattgcaagcttatatgagatgatgcaaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
41906630 |
accttgtggtaagtgtatgaacgaaaatatttcagatttataagctcttggagacgtgaaaatcgttattatattgcaagcttatatgagatggtgcaaa |
41906729 |
T |
|
| Q |
201 |
aagttgaatttactt |
215 |
Q |
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||||||||||||||| |
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| T |
41906730 |
aagttgaatttactt |
41906744 |
T |
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