View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11453A_low_560 (Length: 230)

Name: NF11453A_low_560
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11453A_low_560
NF11453A_low_560
[»] chr8 (3 HSPs)
chr8 (15-199)||(1735317-1735501)
chr8 (15-202)||(17422845-17423032)
chr8 (24-205)||(22348764-22348945)
[»] chr7 (3 HSPs)
chr7 (15-202)||(14342647-14342834)
chr7 (67-209)||(18133578-18133720)
chr7 (36-208)||(18171646-18171818)
[»] chr3 (5 HSPs)
chr3 (15-210)||(14693217-14693412)
chr3 (15-209)||(10782166-10782360)
chr3 (15-199)||(7401977-7402161)
chr3 (18-202)||(13306870-13307054)
chr3 (21-208)||(10150798-10150985)
[»] scaffold0022 (1 HSPs)
scaffold0022 (21-208)||(11371-11558)
[»] scaffold0319 (1 HSPs)
scaffold0319 (24-208)||(9650-9834)
[»] chr2 (4 HSPs)
chr2 (24-208)||(22638328-22638512)
chr2 (24-208)||(23200629-23200813)
chr2 (24-208)||(23626258-23626442)
chr2 (24-202)||(24911914-24912091)
[»] scaffold0016 (1 HSPs)
scaffold0016 (24-208)||(126559-126743)
[»] chr4 (2 HSPs)
chr4 (21-208)||(13289364-13289551)
chr4 (24-199)||(14772567-14772742)
[»] scaffold0241 (1 HSPs)
scaffold0241 (24-199)||(11493-11668)
[»] scaffold0130 (1 HSPs)
scaffold0130 (36-208)||(43155-43327)
[»] scaffold0108 (1 HSPs)
scaffold0108 (21-199)||(26227-26405)
[»] chr1 (2 HSPs)
chr1 (24-202)||(22805838-22806016)
chr1 (115-209)||(41380414-41380508)
[»] chr6 (2 HSPs)
chr6 (24-208)||(19035178-19035362)
chr6 (42-208)||(23435115-23435281)
[»] scaffold0001 (1 HSPs)
scaffold0001 (24-207)||(126760-126943)
[»] scaffold0005 (1 HSPs)
scaffold0005 (24-184)||(67003-67163)
[»] scaffold0040 (1 HSPs)
scaffold0040 (24-207)||(29633-29816)
[»] scaffold0282 (1 HSPs)
scaffold0282 (24-202)||(5538-5716)
[»] chr5 (1 HSPs)
chr5 (24-202)||(21511006-21511184)
[»] scaffold0064 (1 HSPs)
scaffold0064 (21-199)||(37590-37768)
[»] scaffold0023 (2 HSPs)
scaffold0023 (94-202)||(65268-65376)
scaffold0023 (94-202)||(74446-74554)
[»] scaffold0026 (1 HSPs)
scaffold0026 (24-202)||(138973-139151)
[»] scaffold0656 (1 HSPs)
scaffold0656 (24-194)||(5065-5235)
[»] scaffold0019 (1 HSPs)
scaffold0019 (45-202)||(159086-159243)
[»] scaffold0053 (1 HSPs)
scaffold0053 (45-139)||(42285-42379)
[»] scaffold0107 (1 HSPs)
scaffold0107 (135-202)||(1874-1941)
[»] scaffold0013 (4 HSPs)
scaffold0013 (45-100)||(83915-83970)
scaffold0013 (45-100)||(121587-121642)
scaffold0013 (45-115)||(75471-75541)
scaffold0013 (18-100)||(148842-148924)
[»] scaffold0046 (1 HSPs)
scaffold0046 (18-117)||(33649-33748)


Alignment Details
Target: chr8 (Bit Score: 117; Significance: 9e-60; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 1735501 - 1735317
Alignment:
Q  15 tggacatcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctt 114  Q
    |||||||| ||||||||||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||    
T  1735501 tggacatcgtattccacaggcaagatggaaaccacattacagactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcgtcttctt 1735402  T
Q  115 tggagtgatttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctg 199  Q
    | || |||| ||||||||||||||||||||||| | |||||   ||||||||||| ||||||||||| |||||||||||||||||    
T  1735401 ttgaatgatctttcttcagaattgacaatgggggtgaaattcgttctgttgctggcttcttaaccatctcgaacacagctttctg 1735317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 17422845 - 17423032
Alignment:
Q  15 tggacatcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctt 114  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||||||| || || || |||||| | |||||||| ||||||||||||||||| ||||    
T  17422845 tggacatcgtattccacaggtaggatagaaaccacattgcaaactatgtcgaggctcgggtcagatcccgtgaaattcgaagtcatctcctcatcctctt 17422944  T
Q  115 tggagtgatttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgctt 202  Q
    |||  |||| ||||||||  ||||||||||||| | | ||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  17422945 tgggatgatctttcttcaagattgacaatgggggtgagattctctctgttgctggtttcttaaccatttcgaacacctctttctgctt 17423032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 205
Target Start/End: Original strand, 22348764 - 22348945
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    |||| |||||| ||||| |||||||||||||| || || |||||||| || |||||| |  |||||||||||||||| || ||||| |||||||  ||||    
T  22348764 tatttcacaggtaggatcgaaaccacattgcatacgatatcaagactggggtcagatccaatgaaatttgaagtcatttcttcatcctctttgggatgat 22348863  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgcc 205  Q
     |||||| | |||||||||||||| | | ||| ||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  22348864 ctttctttaaaattgacaatgggggtgagattctctctattgctggttttttaaccatttcgaacacaactttctgcttgcc 22348945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 14342647 - 14342834
Alignment:
Q  15 tggacatcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctt 114  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||| || || || |||||||| |||||||||||||||||||||||||| ||||    
T  14342647 tggacatcgtattccacaggcaggattgaaaccacattgcaaactatgtcgaggctcgggtcagattccgtgaaatttgaagtcatctcctcatcctctt 14342746  T
Q  115 tggagtgatttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgctt 202  Q
    ||||   || |||||||| |||||||||||||| | ||||| | | ||||||||||||||||||||||||||||||||||||||||||    
T  14342747 tggaacaatctttcttcaaaattgacaatgggggtgaaattctttttgttgctggtttcttaaccatttcgaacacagctttctgctt 14342834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 18133578 - 18133720
Alignment:
Q  67 gacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgatttttcttcagaattgacaatggggataaaattttctctgttgc 166  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||| | |||||  |||||||||    
T  18133578 gacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaacgatctttcttcagaattgacaatgggggtgaaattcgctctgttgc 18133677  T
Q  167 tggtttcttaaccatttcgaacacagctttctgcttgccctcc 209  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||    
T  18133678 tggtttcttaaccatctcgaacacaactttttgcttgccctcc 18133720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 208
Target Start/End: Original strand, 18171646 - 18171818
Alignment:
Q  36 aggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgatttttcttcagaa 135  Q
    ||||| |||||||||||| | |||||||| ||||| || |||||| | |||||||| |||||||| || ||||| || ||||  |||| ||||||||  |    
T  18171646 aggatagaaaccacattgtacactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaaga 18171745  T
Q  136 ttgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc 208  Q
    ||||||||||||   ||||| | |||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  18171746 ttgacaatgggggcgaaattctttctgttgctggttttttaaccatttcgaacacagctttctgcttaccctc 18171818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 9e-57; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 15 - 210
Target Start/End: Original strand, 14693217 - 14693412
Alignment:
Q  15 tggacatcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctt 114  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||||||||| ||  |||| |||||||| |||||||||||||||||||||| ||| ||||    
T  14693217 tggacatcgtattccacaggcaagatagaaaccacattgcaaactatgtcgaggtttgggtcagattccgtgaaatttgaagtcatctccttatcctctt 14693316  T
Q  115 tggagtgatttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctccg 210  Q
    |||| || | ||||||||  ||||||||||||| | ||||| |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||    
T  14693317 tggaatggtctttcttcaagattgacaatgggggtgaaattctctctgttgctggttttttaaccatttcgaacacggctttctgcttgtcctccg 14693412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 15 - 209
Target Start/End: Complemental strand, 10782360 - 10782166
Alignment:
Q  15 tggacatcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctt 114  Q
    ||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  10782360 tggacatcatattccacaggcaaaatggaaaccacattacaaactatgtcaagacttgggtcagattctgtgaaattcgaagtcatttcctcatcttctt 10782261  T
Q  115 tggagtgatttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctcc 209  Q
    | |  |||| |||| ||||||| ||||||||||   |||||  |||||||||||| ||||||||||| || |||||||||||||||||| |||||    
T  10782260 ttggatgatctttcatcagaatcgacaatgggggcgaaattcgctctgttgctggcttcttaaccatctcaaacacagctttctgcttgtcctcc 10782166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 7401977 - 7402161
Alignment:
Q  15 tggacatcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctt 114  Q
    |||||||| |||||| |||||||||| ||||||||||||||||||||||| ||||| || ||| |||| |||||||||||||||||||||||||| ||||    
T  7401977 tggacatcgtattcctcaggcaggattgaaaccacattgcaaactatgtcgagactcgggtcacattccgtgaaatttgaagtcatctcctcatcctctt 7402076  T
Q  115 tggagtgatttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctg 199  Q
    ||||   ||  ||||||| |||||||||||||| | ||||| | ||||||||||  |||||||||||||||||||||||||||||    
T  7402077 tggaacaatacttcttcaaaattgacaatgggggtgaaattctttctgttgctgccttcttaaccatttcgaacacagctttctg 7402161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 13306870 - 13307054
Alignment:
Q  18 acatcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttgg 117  Q
    ||||| |||||||| || ||||| |||||||||||||||||||| || ||||| || |||||| | |||||||| |||||||| || ||||| |||||||    
T  13306870 acatcgtattccaccggtaggatagaaaccacattgcaaactatatcgagactagggtcagatcccgtgaaattcgaagtcatatcttcatcctctttgg 13306969  T
Q  118 agtgatttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgctt 202  Q
      |||| |||||||| |||||||||||||| | | ||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  13306970 gatgatctttcttcaaaattgacaatgggggtgagattctctctgttgctggtttcttaaccatttcgaacacagttttctgctt 13307054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 10150985 - 10150798
Alignment:
Q  21 tcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagt 120  Q
    |||||||||||||| || || |||||||||||||| |||||||||||||| || |||||| | ||||||||||||||||| || ||||| |||||||  |    
T  10150985 tcatattccacaggtagtatagaaaccacattgcatactatgtcaagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggat 10150886  T
Q  121 gatttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc 208  Q
    ||| |||||||| |||||||||||||| | | ||| |||||||  ||||||| |||||||||||||||||| ||||  ||||||||||    
T  10150885 gatctttcttcaaaattgacaatgggggtgagattctctctgtgactggttttttaaccatttcgaacacatcttttcgcttgccctc 10150798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 11558 - 11371
Alignment:
Q  21 tcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagt 120  Q
    |||||||||| ||| ||||| |||||||||||||| |||||||  ||||| || |||||||| ||||||||||||||||| || ||||| |||||||  |    
T  11558 tcatattccataggtaggatagaaaccacattgcatactatgttgagactagggtcagattcagtgaaatttgaagtcatttcttcatcctctttgggat 11459  T
Q  121 gatttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc 208  Q
    ||| |||||| | ||||||||||||||   | ||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  11458 gatctttctttaaaattgacaatgggggcgagattctctctgttgctggttttttaaccatttcgaacacagctttctgcttaccctc 11371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 24 - 208
Target Start/End: Complemental strand, 9834 - 9650
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    ||||||||||| ||||| |||||||||||||| |||||||| ||||| || |||||| | ||||||||||||||||| || ||||| |||||||  || |    
T  9834 tattccacaggtaggatagaaaccacattgcatactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgtt 9735  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc 208  Q
     |||||| | |||||||||||||| | | ||| ||||||||||||| || ||||||||||||||||||||||||||||| |||||    
T  9734 ctttctttaaaattgacaatgggggtgagattctctctgttgctggctttttaaccatttcgaacacagctttctgcttaccctc 9650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 5e-43; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 24 - 208
Target Start/End: Complemental strand, 22638512 - 22638328
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    |||||||| || ||||| |||||||||||||| |||||||| ||||| || |||||| | |||||||| |||||||| || ||||| |||||||  ||||    
T  22638512 tattccaccggtaggatagaaaccacattgcacactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctctttgggatgat 22638413  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc 208  Q
     |||||||| ||||||||||||||   | ||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  22638412 ctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccatttcgaacacagccttctgcttaccctc 22638328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 23200629 - 23200813
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    |||||||| || ||||| |||||||||||||| ||||| || ||||| || |||||| | |||||||| |||||||| || ||||| |||||||  ||||    
T  23200629 tattccaccggtaggatagaaaccacattgcacactatatcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatcctctttgggatgat 23200728  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc 208  Q
     |||||||| ||||||||||||||   | ||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  23200729 ctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccatttcgaacacagccttctgcttaccctc 23200813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 23626258 - 23626442
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    |||||||| || ||||| |||||||||||||| |||||||| ||||| || |||||| | |||||||| |||||||| ||  |||| || ||||  ||||    
T  23626258 tattccaccggtaggatagaaaccacattgcacactatgtcgagactagggtcagatccagtgaaattcgaagtcatttctacatcctccttgggatgat 23626357  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc 208  Q
     ||| ||||  |||||||||||||   | ||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  23626358 cttttttcaatattgacaatgggggcgagattctctctgttgctggtttcttaaccattttgaacacagctttctgcttaccctc 23626442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 202
Target Start/End: Complemental strand, 24912091 - 24911914
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    ||||||||||  || || || ||||||||||| |||||||| ||||| || |||||| | ||||||||||||||||| || ||||| |||||||  || |    
T  24912091 tattccacagatagaattgataccacattgcatactatgtcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatggt 24911992  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgctt 202  Q
      ||||| |  |||||||| |||| | ||||| ||| |||||||||||| |||||||||||||| |||||| |||||||    
T  24911991 ccttctttaagattgacaa-gggggtgaaattctctttgttgctggttttttaaccatttcgaaaacagctctctgctt 24911914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 126559 - 126743
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    |||||||| || ||||| |||||||||||||| ||||| || ||||| || |||||| | |||||||| |||||||| || ||||| |||||||  ||||    
T  126559 tattccaccggtaggatagaaaccacattgcacactatatcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctctttgggatgat 126658  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc 208  Q
     |||||||| ||||||||||||||   | ||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  126659 ctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccatttcgaacacagccttctgcttaccctc 126743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 13289364 - 13289551
Alignment:
Q  21 tcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagt 120  Q
    |||||||||| ||| ||||| |||||||||||||| |||||||| ||||| || |||||| | |||||||| |||||||| || ||||| |||||||  |    
T  13289364 tcatattccaaaggtaggatagaaaccacattgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctctttgggat 13289463  T
Q  121 gatttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc 208  Q
    ||| |||||| | ||||||||||||||   | ||| ||||||||||||| || ||||||||||||||||||||||||||||| |||||    
T  13289464 gatctttctttaaaattgacaatgggggcgagattctctctgttgctggctttttaaccatttcgaacacagctttctgcttaccctc 13289551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 199
Target Start/End: Original strand, 14772567 - 14772742
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    ||||||||||| ||||| || ||||||||||| ||||| || ||||| || |||||| | ||||||||||||||||| || ||||| |||||||  ||||    
T  14772567 tattccacaggtaggatcgagaccacattgcatactatatcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat 14772666  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctg 199  Q
     |||||| |||||||||||||||| | | ||| |||||||||||||||| |||||||||||||| |||||| ||||    
T  14772667 ctttctttagaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaatacagctctctg 14772742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 199
Target Start/End: Complemental strand, 11668 - 11493
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    ||||||||||| ||||| || ||||||||||| || || |||||||| || |||||| | ||||||||||||||||| || ||||| |||||||  ||||    
T  11668 tattccacaggtaggattgagaccacattgcatacgatatcaagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat 11569  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctg 199  Q
     |||||| | |||||||||||||| | | ||| |||||||||||||||| |||||||||||||| |||||||||||    
T  11568 ctttctttataattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaatacagctttctg 11493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 36 - 208
Target Start/End: Complemental strand, 43327 - 43155
Alignment:
Q  36 aggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgatttttcttcagaa 135  Q
    ||||| |||||||||||||| |||||||| ||||| || |||||| | |||||||| |||||||  || ||||| || ||||  |||| |||||||| ||    
T  43327 aggatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcagttcttcatcctccttgggatgatctttcttcaaaa 43228  T
Q  136 ttgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc 208  Q
    ||||||||||||   | ||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  43227 ttgacaatgggggcgagattctctctgttgctggtttcttaaccattttgaacacagctttctgcttaccctc 43155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 26405 - 26227
Alignment:
Q  21 tcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagt 120  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||| ||||| || |||||| | |||||||| ||||||||||| ||||| || ||| ||     
T  26405 tcatattccacaggtaggatggacaccacgttgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatctcttcatcctccttg-aga 26307  T
Q  121 gatt-tttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctg 199  Q
    || | |||||||| |||||||||||||| | | ||| ||||||||||||| || ||||||||||||||||||||||||||    
T  26306 gagtctttcttcaaaattgacaatgggggtgagattctctctgttgctggctttttaaccatttcgaacacagctttctg 26227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 22805838 - 22806016
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    ||||||||||| ||||| || ||||||||||| ||||| || ||| | || |||||| | ||||||||||||||||| || ||||| |||||||  ||||    
T  22805838 tattccacaggtaggattgagaccacattgcatactatatcgagattggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat 22805937  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgctt 202  Q
     |||||| |||||||||||||||| | | ||| |||||||||||||||| ||||||||||| || |||||| |||||||    
T  22805938 ctttctttagaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcaaatacagctctctgctt 22806016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 209
Target Start/End: Original strand, 41380414 - 41380508
Alignment:
Q  115 tggagtgatttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctcc 209  Q
    |||| |||| |||||||| |||||||||||||| | |||||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  41380414 tggaatgatctttcttcaaaattgacaatgggggtgaaattcgctctgttgctggcttcttaaccatctcgaacacagctttctgcttgccctcc 41380508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 19035178 - 19035362
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    ||||||||||| ||||| || ||||||||||| |  || |||||||| || |||||| | |||||||| |||||||| || ||||| | |||||  | ||    
T  19035178 tattccacaggtaggatcgagaccacattgcatataatatcaagactggggtcagatccagtgaaattcgaagtcatttcttcatcctttttgggattat 19035277  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc 208  Q
    ||||||||| |||||||||||| ||| | ||| |||||||||||||||| ||||| |||||||||| |||||| |||||||||||    
T  19035278 ttttcttcaaaattgacaatggagatgagattctctctgttgctggttttttaactatttcgaacatagctttttgcttgccctc 19035362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 42 - 208
Target Start/End: Complemental strand, 23435281 - 23435115
Alignment:
Q  42 gaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgatttttcttcagaattgaca 141  Q
    |||||||||||||| |||||||| ||||| || |||||| | |||||||| |||||||| || ||||| || ||||  |||| |||||||| ||||||||    
T  23435281 gaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgaca 23435182  T
Q  142 atggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc 208  Q
    ||||||   | ||| ||||| ||||||||||||||||||||||||||||| | |||||||| |||||    
T  23435181 atgggggcgagattctctctattgctggtttcttaaccatttcgaacacaaccttctgcttaccctc 23435115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 207
Target Start/End: Original strand, 126760 - 126943
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    ||||||||||| ||||| || ||||||||||| || || |||||||| || |||||| | ||||||||||||||||| || ||||| || ||||  ||||    
T  126760 tattccacaggtaggatcgagaccacattgcatacgatatcaagactggggtcagatcccgtgaaatttgaagtcatttcttcatcctcattgggatgat 126859  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccct 207  Q
     |||||| | |||| ||||||||| | | ||| ||||||||| |||||| ||||||||||||||||| ||||||||||| ||||    
T  126860 ctttctttaaaattcacaatgggggtgagattctctctgttgttggttttttaaccatttcgaacaccgctttctgctttccct 126943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 184
Target Start/End: Complemental strand, 67163 - 67003
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    ||||||||||| ||||| || ||||||||||| ||||| || ||||| || |||||| | ||||||||||||||||| || ||||| |||||||  ||||    
T  67163 tattccacaggtaggattgagaccacattgcatactatatcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat 67064  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttc 184  Q
     |||||| |||||||||||||||| | | ||| |||||||||||||||| | |||||||||    
T  67063 ctttctttagaattgacaatgggggtgagattctctctgttgctggtttttaaaccatttc 67003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 207
Target Start/End: Complemental strand, 29816 - 29633
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    |||||||| || ||||| |||||||||||||| |||||||| || || || |||||| | ||||||| ||| ||||| || ||||| |||||||  ||||    
T  29816 tattccactggtaggatagaaaccacattgcatactatgtctaggctggggtcagatccggtgaaatctgaggtcatttcttcatcctctttgggatgat 29717  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccct 207  Q
     |||||||| ||||||||| |||| | | ||| ||||| | |||||||| |||||||||||||||||| |||| ||||||||||    
T  29716 ctttcttcaaaattgacaacgggggtgagattctctctatggctggttttttaaccatttcgaacacatctttttgcttgccct 29633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 5538 - 5716
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    ||||||||||| || || || ||||||||||| ||||| || ||||| || |||||| | ||||||||||||||||| || ||||| |||||||  ||||    
T  5538 tattccacaggtagaattgagaccacattgcatactatatcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat 5637  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgctt 202  Q
     |||||| |||||||||||||||| | | ||| |||||||||||||||| | ||||||||| || ||| || |||||||    
T  5638 ctttctttagaattgacaatgggggtgagattctctctgttgctggtttttaaaccatttcaaatacaactctctgctt 5716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 202
Target Start/End: Complemental strand, 21511184 - 21511006
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    ||||||||| | | ||| || ||||||||||| |  || |||||||| || |||||| | ||||||||||||||||| || ||||| || ||||  ||||    
T  21511184 tattccacaagtaagatcgagaccacattgcatatgatatcaagactggggtcagatccagtgaaatttgaagtcatttcttcatcctccttgggatgat 21511085  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgctt 202  Q
     |||||| | |||||||||||||| | | ||| |||||||||||||||| ||||||||||||||||| |||||||||||    
T  21511084 ctttctttaaaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaacaccgctttctgctt 21511006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 199
Target Start/End: Original strand, 37590 - 37768
Alignment:
Q  21 tcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagt 120  Q
    |||||||||||||| ||||| || ||||| || || |||||||| ||||| || |||||| | |||||||| |||||||| || ||||| || ||||       
T  37590 tcatattccacaggtaggatagacaccacgttacatactatgtcgagactagggtcagatccagtgaaattcgaagtcatatcttcatcctccttgggaa 37689  T
Q  121 gatttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctg 199  Q
      | |||||||| |||||||||||||| | ||||| ||| ||||||||| || ||||||||||||||||||||||||||    
T  37690 agtctttcttcaaaattgacaatgggggtgaaattctctatgttgctggctttttaaccatttcgaacacagctttctg 37768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 65376 - 65268
Alignment:
Q  94 aagtcatctcctcatcttctttggagtgatttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagc 193  Q
    ||||||| || ||||| |||||||  |||| |||||| | |||||||||||||| | | ||| |||||||||||||||| |||||||||||||||||| |    
T  65376 aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacacaac 65277  T
Q  194 tttctgctt 202  Q
    |||||||||    
T  65276 tttctgctt 65268  T

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Target: scaffold0023; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 74554 - 74446
Alignment:
Q  94 aagtcatctcctcatcttctttggagtgatttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagc 193  Q
    ||||||| || ||||| |||||||  |||| |||||| | |||||||||||||| | | ||| |||||||||||||||| |||||||||||||||||| |    
T  74554 aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacacaac 74455  T
Q  194 tttctgctt 202  Q
    |||||||||    
T  74454 tttctgctt 74446  T

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Target: scaffold0026 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 138973 - 139151
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    ||||| ||||| ||||| |||||||||||||| |||||||| ||||| || |||||  | |||||||| |||||||| || ||||| |||||||  || |    
T  138973 tattctacaggtaggattgaaaccacattgcatactatgtcgagactagggtcagacccagtgaaattcgaagtcatttcttcatcctctttgggatggt 139072  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgctt 202  Q
     |||||| |  |||||||| || | | | ||  ||| |||||||||||| |||||||||||||| |||||| |||||||    
T  139073 ctttctttaagattgacaagggaggtgagatcctctttgttgctggttttttaaccatttcgaatacagctctctgctt 139151  T

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Target: scaffold0656 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 5235 - 5065
Alignment:
Q  24 tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgat 123  Q
    ||||||||||| || || || ||||||||||| |||||||| |||||  | |||||| | |||||||| |||||||| || ||||| || ||||  || |    
T  5235 tattccacaggtagaattgataccacattgcatactatgtcgagactgaggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatggt 5136  T
Q  124 ttttcttcagaattgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagct 194  Q
     |||||| |  |||||||| |||| | | ||| ||||||||||||| || |||||||||||||| ||||||    
T  5135 ctttctttaagattgacaaggggggtgagattctctctgttgctggctttttaaccatttcgaaaacagct 5065  T

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Target: scaffold0019 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 45 - 202
Target Start/End: Original strand, 159086 - 159243
Alignment:
Q  45 accacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgatttttcttcagaattgacaatg 144  Q
    ||||||||||| |||||||| ||||| || |||||| | |||||||| |||||||| || ||||| || ||||  || ||||||||||  ||||| || |    
T  159086 accacattgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatggtttttcttcaagattgataagg 159185  T
Q  145 gggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgctt 202  Q
    | | | | ||| | ||||||||||| || ||||||||||| || || |||||||||||    
T  159186 gcggtgagattctttctgttgctggctttttaaccatttcaaaaacggctttctgctt 159243  T

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Target: scaffold0053 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 42285 - 42379
Alignment:
Q  45 accacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggagtgatttttcttcagaattga 139  Q
    ||||||||||| ||||| || ||||||||||||||||| |||||||| || ||||| || ||||| || || |  ||||||||||||| ||||||    
T  42285 accacattgcacactatatcgagacttggatcagattcagtgaaattcgacgtcatttcttcatcctccttaggatgatttttcttcaaaattga 42379  T

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Target: scaffold0107 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 1941 - 1874
Alignment:
Q  135 attgacaatggggataaaattttctctgttgctggtttcttaaccatttcgaacacagctttctgctt 202  Q
    |||||||| |||| | | ||| |||||||||||||||| |||||||||||||| |||||| |||||||    
T  1941 attgacaaggggggtgagattctctctgttgctggttttttaaccatttcgaaaacagctctctgctt 1874  T

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Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 83970 - 83915
Alignment:
Q  45 accacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcat 100  Q
    ||||||||||| ||||| || |||||||| |||||||||||||||||||| |||||    
T  83970 accacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcat 83915  T

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Target: scaffold0013; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 121642 - 121587
Alignment:
Q  45 accacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcat 100  Q
    ||||||||||| ||||| || |||||||| |||||||||||||||||||| |||||    
T  121642 accacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcat 121587  T

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Target: scaffold0013; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 75541 - 75471
Alignment:
Q  45 accacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttcttt 115  Q
    ||||||||||| ||||| || |||||||  |||||||||||||||||||| ||||| || ||||| |||||    
T  75541 accacattgcatactatatcgagacttgagtcagattctgtgaaatttgacgtcatttcttcatcctcttt 75471  T

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Target: scaffold0013; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 148924 - 148842
Alignment:
Q  18 acatcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcat 100  Q
    ||||||||||| ||| |||  || || ||||||||||| ||||| || |||||||| ||||||| |||||||||||| |||||    
T  148924 acatcatattcaacatgcaatattgataccacattgcatactatatcgagacttgggtcagattttgtgaaatttgacgtcat 148842  T

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Target: scaffold0046 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 33748 - 33649
Alignment:
Q  18 acatcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttgg 117  Q
    ||||| |||||||||||||  |  || ||||||||||| |||||||| ||||| || |||||| |  ||||||| |||||||| || ||||| |||||||    
T  33748 acatcgtattccacaggcaaaactgacaccacattgcacactatgtcgagactggggtcagatccaatgaaattcgaagtcatttcttcatcctctttgg 33649  T

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