View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11453A_low_605 (Length: 225)

Name: NF11453A_low_605
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11453A_low_605
NF11453A_low_605
[»] chr7 (40 HSPs)
chr7 (1-219)||(22136686-22136904)
chr7 (1-219)||(40551713-40551931)
chr7 (1-219)||(1047477-1047694)
chr7 (28-219)||(7349867-7350058)
chr7 (6-215)||(44127-44335)
chr7 (28-219)||(31156500-31156690)
chr7 (28-219)||(7092768-7092960)
chr7 (30-219)||(21679566-21679755)
chr7 (89-219)||(28487053-28487184)
chr7 (135-219)||(9680255-9680339)
chr7 (30-219)||(9680351-9680540)
chr7 (89-212)||(38395796-38395920)
chr7 (96-212)||(7470692-7470809)
chr7 (5-62)||(7074405-7074462)
chr7 (5-62)||(25405011-25405068)
chr7 (5-57)||(30246612-30246664)
chr7 (28-219)||(20298961-20299155)
chr7 (116-212)||(43938-44033)
chr7 (116-212)||(1047783-1047878)
chr7 (135-219)||(20298865-20298949)
chr7 (111-219)||(24815803-24815909)
chr7 (89-211)||(24815688-24815806)
chr7 (5-62)||(3320557-3320615)
chr7 (116-212)||(22136502-22136597)
chr7 (5-57)||(25409773-25409825)
chr7 (116-212)||(40551529-40551624)
chr7 (135-219)||(44726330-44726414)
chr7 (30-165)||(44726480-44726614)
chr7 (135-212)||(20298678-20298756)
chr7 (135-212)||(20298775-20298853)
chr7 (111-175)||(6067801-6067863)
chr7 (135-219)||(21679469-21679554)
chr7 (116-212)||(31156779-31156875)
chr7 (116-212)||(7350147-7350242)
chr7 (135-212)||(7092972-7093050)
chr7 (135-212)||(7470828-7470906)
chr7 (92-193)||(26214491-26214590)
chr7 (116-219)||(9680066-9680168)
chr7 (135-212)||(38395699-38395777)
chr7 (5-33)||(7465007-7465035)
[»] chr6 (18 HSPs)
chr6 (1-219)||(33310762-33310980)
chr6 (1-219)||(26066585-26066803)
chr6 (89-219)||(3395904-3396033)
chr6 (4-213)||(30729323-30729536)
chr6 (4-214)||(15533197-15533411)
chr6 (96-219)||(3630490-3630612)
chr6 (5-62)||(13883093-13883150)
chr6 (5-62)||(31249221-31249278)
chr6 (5-62)||(35201833-35201890)
chr6 (5-57)||(35209068-35209120)
chr6 (89-219)||(26944733-26944862)
chr6 (135-219)||(3630718-3630802)
chr6 (116-212)||(26066892-26066987)
chr6 (116-219)||(3395713-3395815)
chr6 (116-212)||(33310578-33310673)
chr6 (135-219)||(15533428-15533513)
chr6 (18-62)||(22344783-22344827)
chr6 (1-30)||(33308682-33308711)
[»] chr5 (31 HSPs)
chr5 (1-219)||(10756768-10756986)
chr5 (1-219)||(15355039-15355257)
chr5 (1-219)||(23666917-23667135)
chr5 (1-219)||(34477606-34477824)
chr5 (1-219)||(31544607-31544824)
chr5 (5-219)||(6746851-6747066)
chr5 (1-219)||(31466470-31466692)
chr5 (2-219)||(659517-659738)
chr5 (89-219)||(27912023-27912154)
chr5 (89-219)||(41586568-41586697)
chr5 (28-220)||(18509907-18510102)
chr5 (2-165)||(20504427-20504594)
chr5 (89-212)||(18468509-18468633)
chr5 (135-219)||(20504660-20504744)
chr5 (116-219)||(18510189-18510292)
chr5 (5-62)||(40222379-40222436)
chr5 (8-62)||(25452111-25452165)
chr5 (116-212)||(10756583-10756678)
chr5 (116-212)||(15355347-15355442)
chr5 (116-212)||(23666732-23666827)
chr5 (135-219)||(41586801-41586885)
chr5 (116-219)||(27911833-27911935)
chr5 (135-219)||(659420-659505)
chr5 (135-219)||(20044372-20044457)
chr5 (131-212)||(31544423-31544504)
chr5 (116-212)||(34477913-34478009)
chr5 (135-219)||(20044469-20044553)
chr5 (135-212)||(6746761-6746839)
chr5 (30-133)||(20044649-20044755)
chr5 (135-212)||(18468412-18468490)
chr5 (135-200)||(31466704-31466770)
[»] scaffold0140 (2 HSPs)
scaffold0140 (1-219)||(23998-24216)
scaffold0140 (116-212)||(23813-23908)
[»] chr2 (25 HSPs)
chr2 (1-219)||(36559332-36559550)
chr2 (28-219)||(35216184-35216375)
chr2 (1-219)||(19502524-19502741)
chr2 (30-219)||(21518946-21519139)
chr2 (2-219)||(6259329-6259550)
chr2 (135-219)||(6259562-6259646)
chr2 (135-219)||(22405148-22405232)
chr2 (5-62)||(2740559-2740616)
chr2 (5-62)||(22713004-22713061)
chr2 (5-62)||(30478631-30478688)
chr2 (5-62)||(39686601-39686658)
chr2 (5-57)||(17943180-17943232)
chr2 (6-62)||(20050533-20050589)
chr2 (116-212)||(35216464-35216559)
chr2 (89-219)||(13828904-13829031)
chr2 (113-219)||(31733465-31733570)
chr2 (2-57)||(28462819-28462874)
chr2 (4-62)||(30262268-30262326)
chr2 (116-212)||(19502830-19502925)
chr2 (116-212)||(36559639-36559734)
chr2 (139-219)||(31733680-31733760)
chr2 (135-219)||(21519151-21519236)
chr2 (2-30)||(21521209-21521237)
chr2 (89-129)||(31733348-31733388)
chr2 (89-133)||(41303710-41303754)
[»] chr1 (44 HSPs)
chr1 (1-219)||(47179236-47179454)
chr1 (1-219)||(16228044-16228262)
chr1 (5-219)||(20302005-20302220)
chr1 (1-219)||(51751911-51752130)
chr1 (4-219)||(28842040-28842256)
chr1 (5-219)||(14098488-14098706)
chr1 (6-219)||(28201926-28202143)
chr1 (96-219)||(27337602-27337726)
chr1 (28-212)||(31736115-31736304)
chr1 (131-219)||(51751720-51751808)
chr1 (111-219)||(16430538-16430645)
chr1 (135-219)||(31423641-31423725)
chr1 (135-219)||(50077398-50077482)
chr1 (90-220)||(25249117-25249246)
chr1 (5-62)||(2393790-2393847)
chr1 (5-62)||(9526082-9526139)
chr1 (135-219)||(16430348-16430432)
chr1 (135-219)||(25249257-25249341)
chr1 (135-219)||(50077588-50077672)
chr1 (89-214)||(13126062-13126184)
chr1 (8-219)||(155235-155448)
chr1 (30-219)||(50077195-50077386)
chr1 (135-219)||(6996928-6997012)
chr1 (135-219)||(13126201-13126284)
chr1 (116-212)||(47179052-47179147)
chr1 (30-165)||(8347833-8347970)
chr1 (135-212)||(16227857-16227935)
chr1 (135-219)||(28202155-28202239)
chr1 (66-167)||(8954236-8954335)
chr1 (118-204)||(20301829-20301914)
chr1 (135-220)||(25127206-25127292)
chr1 (89-182)||(25127438-25127530)
chr1 (135-219)||(31423830-31423914)
chr1 (152-219)||(25127304-25127371)
chr1 (140-219)||(25249451-25249530)
chr1 (101-219)||(31423512-31423629)
chr1 (135-212)||(31736323-31736401)
chr1 (111-219)||(8954090-8954197)
chr1 (112-204)||(10742240-10742329)
chr1 (89-128)||(16430721-16430760)
chr1 (28-219)||(6997024-6997214)
chr1 (135-219)||(14098718-14098803)
chr1 (1-29)||(13761575-13761603)
chr1 (1-29)||(47177076-47177104)
[»] chr4 (43 HSPs)
chr4 (1-219)||(16932334-16932551)
chr4 (2-219)||(9174659-9174876)
chr4 (1-219)||(11006755-11006973)
chr4 (1-219)||(22780926-22781142)
chr4 (6-219)||(22044909-22045121)
chr4 (28-219)||(22132987-22133178)
chr4 (2-219)||(36920100-36920315)
chr4 (18-219)||(22801354-22801554)
chr4 (1-219)||(3825086-3825310)
chr4 (89-219)||(12401409-12401538)
chr4 (89-219)||(12396467-12396596)
chr4 (2-165)||(24880116-24880283)
chr4 (135-219)||(5100455-5100538)
chr4 (30-219)||(16454857-16455047)
chr4 (140-219)||(36920332-36920411)
chr4 (4-62)||(4569688-4569746)
chr4 (135-213)||(47564217-47564295)
chr4 (116-212)||(11007062-11007158)
chr4 (5-62)||(15316595-15316652)
chr4 (5-57)||(4884501-4884553)
chr4 (89-165)||(5100603-5100678)
chr4 (89-165)||(14788086-14788161)
chr4 (116-212)||(22045210-22045305)
chr4 (2-57)||(16638519-16638574)
chr4 (116-212)||(22781231-22781327)
chr4 (138-219)||(24879966-24880047)
chr4 (116-212)||(9174965-9175060)
chr4 (111-219)||(36379872-36379979)
chr4 (66-162)||(47564364-47564459)
chr4 (90-211)||(18535402-18535519)
chr4 (89-163)||(36380023-36380096)
chr4 (135-219)||(14788227-14788311)
chr4 (6-50)||(22048554-22048598)
chr4 (135-219)||(22801566-22801650)
chr4 (135-212)||(16932660-16932738)
chr4 (135-219)||(16454760-16454845)
chr4 (135-188)||(18535539-18535592)
chr4 (135-214)||(18535631-18535710)
chr4 (116-219)||(36379681-36379783)
chr4 (135-200)||(3825322-3825388)
chr4 (135-219)||(12396608-12396693)
chr4 (135-219)||(12401550-12401635)
chr4 (28-56)||(47747342-47747370)
[»] chr8 (21 HSPs)
chr8 (1-219)||(43081530-43081748)
chr8 (1-219)||(18812477-18812694)
chr8 (4-219)||(27828900-27829116)
chr8 (5-219)||(15072310-15072528)
chr8 (89-219)||(41384298-41384427)
chr8 (5-62)||(4812996-4813053)
chr8 (5-57)||(25684266-25684318)
chr8 (116-219)||(41384108-41384210)
chr8 (89-219)||(17849338-17849466)
chr8 (135-219)||(15072213-15072298)
chr8 (5-62)||(28332249-28332306)
chr8 (5-57)||(590436-590488)
chr8 (5-57)||(3275922-3275974)
chr8 (131-211)||(43081347-43081427)
chr8 (135-212)||(27828714-27828791)
chr8 (8-57)||(28895123-28895172)
chr8 (5-57)||(16753030-16753082)
chr8 (67-176)||(31574293-31574400)
chr8 (30-167)||(21481982-21482121)
chr8 (169-219)||(14418788-14418838)
chr8 (1-30)||(44720614-44720643)
[»] chr3 (48 HSPs)
chr3 (1-219)||(6063980-6064198)
chr3 (1-219)||(7606937-7607156)
chr3 (6-219)||(11169954-11170166)
chr3 (28-219)||(457759-457950)
chr3 (4-219)||(10956540-10956754)
chr3 (14-219)||(5899266-5899470)
chr3 (1-219)||(18097396-18097613)
chr3 (5-210)||(4308796-4309002)
chr3 (5-219)||(43227839-43228054)
chr3 (5-212)||(35918464-35918672)
chr3 (28-219)||(3306327-3306518)
chr3 (32-219)||(43421975-43422160)
chr3 (89-214)||(42991762-42991888)
chr3 (90-219)||(28100661-28100789)
chr3 (30-219)||(28137833-28138022)
chr3 (142-219)||(53916286-53916363)
chr3 (30-219)||(890310-890498)
chr3 (135-214)||(23636446-23636525)
chr3 (5-62)||(10094576-10094633)
chr3 (5-62)||(16461818-16461875)
chr3 (5-62)||(47878659-47878716)
chr3 (135-219)||(890510-890594)
chr3 (5-57)||(10595519-10595571)
chr3 (5-57)||(10901368-10901420)
chr3 (5-57)||(54192867-54192919)
chr3 (140-219)||(890705-890784)
chr3 (116-219)||(53916450-53916552)
chr3 (5-62)||(10201462-10201519)
chr3 (116-212)||(5899082-5899178)
chr3 (140-219)||(3316062-3316141)
chr3 (116-219)||(43422247-43422349)
chr3 (116-212)||(6064287-6064383)
chr3 (116-212)||(457575-457670)
chr3 (89-219)||(1619271-1619400)
chr3 (116-212)||(10956843-10956938)
chr3 (116-212)||(11169770-11169865)
chr3 (89-219)||(53916147-53916276)
chr3 (89-163)||(2075642-2075716)
chr3 (135-212)||(4309023-4309101)
chr3 (135-219)||(18097625-18097710)
chr3 (135-210)||(42991669-42991745)
chr3 (89-211)||(23636545-23636663)
chr3 (135-212)||(35918691-35918769)
chr3 (135-212)||(43227749-43227827)
chr3 (89-169)||(14634783-14634862)
chr3 (135-193)||(28138034-28138093)
chr3 (1-29)||(18099681-18099709)
chr3 (1-29)||(22114816-22114844)
[»] scaffold0250 (1 HSPs)
scaffold0250 (6-219)||(2448-2650)
[»] scaffold0025 (2 HSPs)
scaffold0025 (5-211)||(69811-70019)
scaffold0025 (135-212)||(70039-70117)
[»] scaffold1674 (2 HSPs)
scaffold1674 (28-212)||(95-280)
scaffold1674 (135-212)||(299-377)
[»] scaffold1764 (1 HSPs)
scaffold1764 (5-62)||(1073-1130)
[»] scaffold0011 (2 HSPs)
scaffold0011 (135-219)||(35296-35380)
scaffold0011 (30-182)||(35429-35579)
[»] scaffold0005 (2 HSPs)
scaffold0005 (89-165)||(51569-51644)
scaffold0005 (135-219)||(51419-51503)
[»] scaffold0133 (3 HSPs)
scaffold0133 (138-214)||(4195-4271)
scaffold0133 (140-213)||(4292-4365)
scaffold0133 (89-195)||(4387-4489)


Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 22136904 - 22136686
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  22136904 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttccc 22136805  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22136804 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 22136705  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  22136704 atttcaggtagttctacaa 22136686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 40551931 - 40551713
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  40551931 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttccc 40551832  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40551831 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 40551732  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  40551731 atttcaggtagttctacaa 40551713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 1047477 - 1047694
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |   ||||||||||||    
T  1047477 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacctccttgctgctctttcccttgcttccc 1047576  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1047577 actactccaagtagctccacaagtttacaccct-aacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 1047675  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  1047676 atttcaggtagttctacaa 1047694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 7349867 - 7350058
Alignment:
Q  28 attctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagttta 127  Q
    ||||||||||||||||  |||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7349867 attctccaccttgactctaaattagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttcccactactccaagtagctccacaagttta 7349966  T
Q  128 caccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7349967 caccctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattttaggtagttctacaa 7350058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 6 - 215
Target Start/End: Complemental strand, 44335 - 44127
Alignment:
Q  6 tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccactac 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| |||||||||| |   |||||||||||||||||    
T  44335 tgattttaagttaactctcacaattctccaccttgacttcaaatcaatgatgatgccaatcatcaacatccttgctgctctttcccttgcttcccactac 44236  T
Q  106 tccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttc 205  Q
    |||||||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44235 tccaagtagctccacaagtttacaccct-aacctctttagccatcggaatgtctaccgccttctcgaagatgcttgtagtccaactacgctaggaatttc 44137  T
Q  206 aggtagttct 215  Q
    ||||||||||    
T  44136 aggtagttct 44127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 31156500 - 31156690
Alignment:
Q  28 attctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagttta 127  Q
    ||||||||||||||||  |||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31156500 attctccaccttgactctaaattagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttcccactactccaagtagctccacaagttta 31156599  T
Q  128 caccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31156600 caccct-aacctcttcagtcatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 31156690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 7092768 - 7092960
Alignment:
Q  28 attctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagttta 127  Q
    ||||||||||||||||  |||| ||||||| |||| |||||||||||||||| ||| |   ||||||||||||||||| |||||||||||||||||||||    
T  7092768 attctccaccttgactctaaattagtgatgatgccaatcatcaacctccttgttgctctttcccttgcttcccactacaccaagtagctccacaagttta 7092867  T
Q  128 cacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| |  |||| |||||||  |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||    
T  7092868 cacctcataaccccttcagctctcagaatgtcttccgccttctcgaaggtccttgtagtccaactacgctaggaattttaggtagttccacaa 7092960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 21679755 - 21679566
Alignment:
Q  30 tctccaccttgacttcaaatcagtgatggtgccg-atcatcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtttac 128  Q
    ||||||||||||||| |||| ||||||| ||||  | |||||||| || || ||| |   |||||||||||||| || ||||||||||||||||||||||    
T  21679755 tctccaccttgactttaaattagtgatgatgccacaccatcaaccaccatgttgctccttcccttgcttcccaccacaccaagtagctccacaagtttac 21679656  T
Q  129 accctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||||| |||| ||||||||||| || |||||||||||||||||||| | |||| |||||||||||||||||||||| ||||||||| ||||    
T  21679655 accct-aaccccttcagccatcggattgtcttccgccttctcgaaggtccttgcagtccaactacgctaggaattttaggtagttccacaa 21679566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 28487184 - 28487053
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc 187  Q
    ||||||||||||||||| ||||||||||||||||||||||||| || |||| ||||||||||| |||| | |||||||||||||||| | ||||||||||    
T  28487184 cccttgcttcccactacaccaagtagctccacaagtttacacctctaaaccccttcagccatcggaatattttccgccttctcgaaggtccttgtagtcc 28487085  T
Q  188 aactacgctaggaatttcaggtagttctacaa 219  Q
    ||||||||||||||||| ||||||||| ||||    
T  28487084 aactacgctaggaattttaggtagttccacaa 28487053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 9680339 - 9680255
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  9680339 aacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaattatgctaggaatttcaggtagttctacaa 9680255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 9680540 - 9680351
Alignment:
Q  30 tctccaccttgacttcaaatcagtgatggtgccgatc-atcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtttac 128  Q
    ||||||||||||||  |||| ||||||| || | | | ||||||||||||||||| |   ||||||| ||  ||||| ||||||||||||||||||||||    
T  9680540 tctccaccttgactctaaattagtgatgatgtcaaaccatcaacctccttgctgctctttcccttgcgtcgtactacaccaagtagctccacaagtttac 9680441  T
Q  129 accctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc-aactacgctaggaatttcaggtagttctacaa 219  Q
    ||||| |||||||||||||||| ||||| |||||||| | | |||||| ||||| |||| |||||| | |||||||| ||||||||||||||    
T  9680440 accct-aacctcttcagccatcggaatgccttccgcccttttgaagatccttgt-gtccaaactactcaaggaattttaggtagttctacaa 9680351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 38395920 - 38395796
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc 187  Q
    ||||||||||||||||| |||||||||| |||||||||||||| |  ||||  ||||||| || ||||||||||||||||||||||| | |||| |||||    
T  38395920 cccttgcttcccactacaccaagtagcttcacaagtttacacctcataaccctttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtcc 38395821  T
Q  188 aactacgctaggaatttcaggtagt 212  Q
    |||||| |||||| ||| |||||||    
T  38395820 aactacactaggagttttaggtagt 38395796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 96 - 212
Target Start/End: Original strand, 7470692 - 7470809
Alignment:
Q  96 ttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacg 194  Q
    |||||||||| ||||||||||||||||||||||||| |  | || |||||||| || ||||||||||||||||||||||| | |||| |||||||||||     
T  7470692 ttcccactacaccaagtagctccacaagtttacacctcatagccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactaca 7470791  T
Q  195 ctaggaatttcaggtagt 212  Q
     ||||||||| |||||||    
T  7470792 ttaggaattttaggtagt 7470809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 7074462 - 7074405
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7074462 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 7074405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 25405068 - 25405011
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25405068 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 25405011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30246664 - 30246612
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30246664 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 30246612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 219
Target Start/End: Complemental strand, 20299155 - 20298961
Alignment:
Q  28 attctccaccttgacttcaaatcagtgatggtgccgat----catcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaag 123  Q
    ||||||||||||||||  |||| ||||||| |||| ||    |||||||| || |||||| |   |||||||||||||| || |||||||||||||||||    
T  20299155 attctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttcccacgacaccaagtagctccacaag 20299056  T
Q  124 tttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc-aactacgctaggaatttcaggtagttctacaa 219  Q
    ||||||||||  ||||||||| ||||| ||||| |||||||| | | |||||| ||||| |||| |||||| | ||| |||| ||||||||| ||||    
T  20299055 tttacaccct-gacctcttcaaccatcggaatgccttccgcccttttgaagatccttgt-gtccaaactactcaaggcattttaggtagttccacaa 20298961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 44033 - 43938
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| |||||||| || ||||||||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  44033 tccacaagtatacacc-tcaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 43938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 1047783 - 1047878
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| |||||||| || ||||||||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  1047783 tccacaagtatacacc-tcaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 1047878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 20298949 - 20298865
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| |||||||| || ||||||||||||||||||||||| | |||| ||||||||||| |||||||||| ||||||||| ||||    
T  20298949 aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaa 20298865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 24815803 - 24815909
Alignment:
Q  111 gtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggta 210  Q
    ||||||||||||||  ||||| | |||||||||||||||| |||||| |||||||||||||||| | |||| |  |||||||| |||||||||| |||||    
T  24815803 gtagctccacaagtacacacctt-aacctcttcagccatcggaatgtattccgccttctcgaaggtccttgca-cccaactacactaggaattttaggta 24815900  T
Q  211 gttctacaa 219  Q
    |||||||||    
T  24815901 gttctacaa 24815909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 24815688 - 24815806
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcca 188  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |  |||| |||| ||||| ||| | |||||||||| | |||||| |||| | ||||    
T  24815688 cccttgctttccactacaccaagtagctccacaagtttacacctt--acctgttcaaccatccgaacgccttccgccttgt-gaagattcttgca-tcca 24815783  T
Q  189 actacgctaggaatttcaggtag 211  Q
    |||||||||||||||| ||||||    
T  24815784 actacgctaggaattttaggtag 24815806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 3320557 - 3320615
Alignment:
Q  5 ctgattttaagttaact-ctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  3320557 ctgattttaagttaacttctcacaattctccaccttgacttcaaatcagtgatgatgcc 3320615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 22136597 - 22136502
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| |||||||| || |||| |||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  22136597 tccacaagtatacacc-tcaaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 22136502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 25409825 - 25409773
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  25409825 ctgattttaagttaacttttacaattctccaccttgacttcaaatcagtgatg 25409773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 40551624 - 40551529
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| |||||||| || |||| |||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  40551624 tccacaagtatacacc-tcaaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 40551529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 44726414 - 44726330
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| |||||||| || ||||||||||||||||||||||| |  ||| ||||||||||| |||||||||| ||||||||| ||||    
T  44726414 aaccccttcagccctcggaatgtcttccgccttctcgaaggtcattgcagtccaactacactaggaattttaggtagttccacaa 44726330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 44726614 - 44726480
Alignment:
Q  30 tctccaccttgacttcaaatcagtgatggtgccgatc-atcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtttac 128  Q
    ||||||||||||||  |||| ||||||| |||| | | ||||||  ||||||||| |   |||||| |||||||||| ||||||||||||||||| ||||    
T  44726614 tctccaccttgactctaaattagtgatgatgccaaaccatcaactaccttgctgctctttcccttg-ttcccactacaccaagtagctccacaagattac 44726516  T
Q  129 accctcaacctcttcagccatcagaatgtcttccgcc 165  Q
    |||||  ||||||||| ||||| ||||| ||||||||    
T  44726515 accct-gacctcttcaaccatcggaatgccttccgcc 44726480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 20298756 - 20298678
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||||||||||| ||| |||||||| ||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  20298756 aacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagt 20298678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 20298853 - 20298775
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||||||||||| ||| |||||||| ||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  20298853 aacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagt 20298775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 6067801 - 6067863
Alignment:
Q  111 gtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaaga 175  Q
    |||||||||||||||| |||||  |||||||||| ||||| |||||||||||||||||| |||||    
T  6067801 gtagctccacaagtttccaccc--aacctcttcaaccatcggaatgtcttccgccttcttgaaga 6067863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 21679554 - 21679469
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||||||||| |||||| ||| |||| ||||||||||||||| | |||| ||||||||||| |||||||||| | ||||||| ||||    
T  21679554 aacctcttctgccatcggaacgtctcccgccttctcgaagagtccttgcagtccaactacactaggaattttatgtagttcgacaa 21679469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 31156779 - 31156875
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| ||||||||||| |||| ||||||||  ||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  31156779 tccacaagtatacacc-tcaaccccttcagccatcggaatatcttccgcactctcgaagagtccttgcagtccaactacactaggagttttaggtagt 31156875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 7350147 - 7350242
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||| | |||||||| |  ||||||||||||||||||||||| | |||| ||||||||||| |||| | ||| |||||||    
T  7350147 tccacaagtatacacc-tcaatcccttcagcccttggaatgtcttccgccttctcgaaggtccttgcagtccaactacactagaagttttaggtagt 7350242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 7092972 - 7093050
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||||||||||| ||| |||||| | ||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  7092972 aacctcttcagccatcggaacgtcttcggtcttctcgaagagtccttgcagtccaactacactaggatttttaggtagt 7093050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 7470828 - 7470906
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||||||||||| ||| |||||||| ||||||||||| | |||| | | |||||| ||||||||||| |||||||    
T  7470828 aacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcacttcaactatgctaggaattttaggtagt 7470906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 193
Target Start/End: Complemental strand, 26214590 - 26214491
Alignment:
Q  92 ttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaact 191  Q
    |||||||| ||||| ||||||||||||| ||| || ||||||   |||||||| ||||||||||| |||||||||| | |||| | |||||| |||||||    
T  26214590 ttgcttccaactacaccaagtagctccataagcttccacccttg-cctcttcaaccatcagaatgacttccgcctttttgaagttccttgta-tccaact 26214493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 9680168 - 9680066
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttct 215  Q
    ||||||||| |||||| | |||| |||| ||| ||  |||||||||| ||||||||||| | |||| ||||  |||||||||| ||||| |||||||||     
T  9680168 tccacaagtatacacctt-aaccccttcggccctcgtaatgtcttccaccttctcgaaggtccttgcagtcagactacgctagaaattttaggtagttcc 9680070  T
Q  216 acaa 219  Q
    ||||    
T  9680069 acaa 9680066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 38395777 - 38395699
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||||||||||| ||| ||||||   ||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  38395777 aacctcttcagccatcggaacgtcttctctcttctcgaagagtccttgcagtccaactacactaggagttttaggtagt 38395699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 7465007 - 7465035
Alignment:
Q  5 ctgattttaagttaactctcacaattctc 33  Q
    |||||||||||||||||||||||||||||    
T  7465007 ctgattttaagttaactctcacaattctc 7465035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 33310980 - 33310762
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  33310980 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttccc 33310881  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33310880 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 33310781  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  33310780 atttcaggtagttctacaa 33310762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 26066585 - 26066803
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  26066585 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttccc 26066684  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26066685 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcggaatgtcttcctccttctcgaagatgcttgtagtccaactacgctagga 26066784  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  26066785 atttcaggtagttctacaa 26066803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 3396033 - 3395904
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcca 188  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  3396033 cccttgcttcccactacaccaagtatctccacaagtttacaccct-aacctcttcagccatcggaatgtcttctgccttctcgaagatgcttgtagtcca 3395935  T
Q  189 actacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||||||||||||||||||    
T  3395934 actacgctaggaatttcaggtagttctacaa 3395904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 4 - 213
Target Start/End: Original strand, 30729323 - 30729536
Alignment:
Q  4 cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgat----catcaacctcc-ttgctgcccaaacccttgcttc 98  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    |||||||| || ||||||| |   ||||||||||    
T  30729323 cctgatattaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatttaacatcaaccaccattgctgctctttcccttgcttc 30729422  T
Q  99 ccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctag 198  Q
    | ||||| |||| |||||||||||||||||||  | |||| ||||||||||| ||||||||||||||||||||||| | |||| ||||||||||| ||||    
T  30729423 ctactacaccaaatagctccacaagtttacacttt-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactag 30729521  T
Q  199 gaatttcaggtagtt 213  Q
    |||||| ||||||||    
T  30729522 gaattttaggtagtt 30729536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 4 - 214
Target Start/End: Original strand, 15533197 - 15533411
Alignment:
Q  4 cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgat----catcaacctcc-ttgctgcccaaacccttgcttc 98  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||  |    |||||||| || ||| ||| |   ||||||||||    
T  15533197 cctgattttaagttaactctcacaattctccaccatgacttcaaataagtgatgatgccactttaacatcaaccaccattgttgctctttcccttgcttc 15533296  T
Q  99 ccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctag 198  Q
    ||||||| |||||||||||||||| |||||||||  |||| ||||||||||||||||||||||||||||||||||| | |||| ||||||||||| || |    
T  15533297 ccactacaccaagtagctccacaaatttacacccg-aaccccttcagccatcagaatgtcttccgccttctcgaaggtccttgcagtccaactacacttg 15533395  T
Q  199 gaatttcaggtagttc 214  Q
    |||||| |||||||||    
T  15533396 gaattttaggtagttc 15533411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 3630490 - 3630612
Alignment:
Q  96 ttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgc 195  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||| ||||| |||||||| ||||||| |    
T  3630490 ttcccactacaccaagtagctccacaagtttacaccct-aacctctttagccatcggaatgtcttccgccttctcaaagatccttgtagttcaactacac 3630588  T
Q  196 taggaatttcaggtagttctacaa 219  Q
    ||||||||||||||||||||||||    
T  3630589 taggaatttcaggtagttctacaa 3630612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 13883150 - 13883093
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13883150 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 13883093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 31249221 - 31249278
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31249221 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 31249278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 35201833 - 35201890
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35201833 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 35201890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 35209068 - 35209120
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35209068 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 35209120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 26944862 - 26944733
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcca 188  Q
    ||||||||||||||||| ||| ||||||||| ||||  ||||  | |||| |||||||||||  |||| |||||||||| |||||| | |||| ||||||    
T  26944862 cccttgcttcccactacaccatgtagctccataagtacacacatt-aaccccttcagccatcgaaatgccttccgccttttcgaaggtccttgcagtcca 26944764  T
Q  189 actacgctaggaatttcaggtagttctacaa 219  Q
    |||| ||||||||||| ||||||||| ||||    
T  26944763 actatgctaggaattttaggtagttccacaa 26944733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 3630718 - 3630802
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| |||||||| ||  |||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||||||| ||||    
T  3630718 aaccccttcagccctcgaaatgtcttccgccttctcgaaggtccttgcagtccaactacgctaggaattttaggtagttccacaa 3630802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 26066892 - 26066987
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| ||||||||||| |||||||||||| |||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  26066892 tccacaagtatacacc-tcaaccccttcagccatcggaatgtcttccgtcttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 26066987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 3395815 - 3395713
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttct 215  Q
    ||||||||| |||||| | |||| |||||||| || ||||||||||||||||||||||| | |||| |||||||||||  ||||||||| |||||||||     
T  3395815 tccacaagtatacacctt-aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacaataggaattttaggtagttcc 3395717  T
Q  216 acaa 219  Q
    ||||    
T  3395716 acaa 3395713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 33310673 - 33310578
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| |||||||| || |||| |||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  33310673 tccacaagtatacacc-tcaaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 33310578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 15533428 - 15533513
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||||||||||||| || ||| |||||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||||| ||||    
T  15533428 aacctcttcagccctcggaacgtcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagttccacaa 15533513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 22344783 - 22344827
Alignment:
Q  18 aactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  22344783 aactctcacaattctccaccttgacttcaaatcagtgatgatgcc 22344827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 33308711 - 33308682
Alignment:
Q  1 aaacctgattttaagttaactctcacaatt 30  Q
    ||||||||||||||||||||||||||||||    
T  33308711 aaacctgattttaagttaactctcacaatt 33308682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 10756986 - 10756768
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  10756986 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttccc 10756887  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10756886 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 10756787  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  10756786 atttcaggtagttctacaa 10756768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 15355039 - 15355257
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  15355039 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttccc 15355138  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15355139 actactccaagtagctccacaagtttacaccatcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 15355238  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  15355239 atttcaggtagttctacaa 15355257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 23667135 - 23666917
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  23667135 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttccc 23667036  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23667035 actactccaagtagctccacaagtttacaccatcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 23666936  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  23666935 atttcaggtagttctacaa 23666917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 34477606 - 34477824
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  34477606 aaacttgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttccc 34477705  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34477706 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 34477805  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||| ||||||    
T  34477806 atttcaggtagtcctacaa 34477824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 31544824 - 31544607
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||| ||||||||||||||||    
T  31544824 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaaccaccttgctgctcaaacccttgcttccc 31544725  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31544724 actactccaagtagctccacaagtttacaccct-aacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 31544626  T
Q  201 atttcaggtagttctacaa 219  Q
    ||||||||| |||||||||    
T  31544625 atttcaggtggttctacaa 31544607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 5 - 219
Target Start/End: Complemental strand, 6747066 - 6746851
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccacta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |   ||||||||||||||||    
T  6747066 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacctccttgttgctctttcccttgcttcccacta 6746967  T
Q  105 ctccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatt 203  Q
    ||||||||||||||||||||||||||| || |||| |||||||| |||||||||||||||||||||||||| | |||  |||||||||||||||||||||    
T  6746966 ctccaagtagctccacaagtttacacctcttaaccccttcagccctcagaatgtcttccgccttctcgaaggtccttacagtccaactacgctaggaatt 6746867  T
Q  204 tcaggtagttctacaa 219  Q
    | ||||||||| ||||    
T  6746866 ttaggtagttccacaa 6746851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 31466470 - 31466692
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgat----catcaacctcc-ttgctgcccaaacccttgc 95  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||    |||||||| || ||| ||  |   |||||||    
T  31466470 aaacctgattttaagttaactctcacaattctccacattgacttcaaatcagtgatgatgccaatttaacatcaaccaccattgttgttctttcccttgc 31466569  T
Q  96 ttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgc 195  Q
    |||||||||| |||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||      
T  31466570 ttcccactacaccaagtagctccacaaatttacaccct-aaccccttcagccatcagaatgtcttccgccttctcgaaggtccttgcagtccaactacaa 31466668  T
Q  196 taggaatttcaggtagttctacaa 219  Q
    ||||||||| ||||||||| ||||    
T  31466669 taggaattttaggtagttccacaa 31466692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 2 - 219
Target Start/End: Complemental strand, 659738 - 659517
Alignment:
Q  2 aacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgat----catcaacctcc-ttgctgcccaaacccttgct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||    |||||||| || ||||||| |   || |||||    
T  659738 aacctgattttaagttaactctcacaattctccaccttgacttcaaatcagggatgatgccaatttaacatcaaccaccattgctgctctttccattgct 659639  T
Q  97 tcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgct 196  Q
    ||||||||| ||||||||||||||||||||||||| | |||| ||||| ||||| ||||||||||||||||||||||| | |||| ||||||||||| ||    
T  659638 tcccactacaccaagtagctccacaagtttacacctt-aaccccttcaaccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacact 659540  T
Q  197 aggaatttcaggtagttctacaa 219  Q
    |||||||| ||||||||| ||||    
T  659539 aggaattttaggtagttccacaa 659517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 27912154 - 27912023
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc 187  Q
    ||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||     
T  27912154 cccttgcttcccactacaccaagtagctccacaagtttacacctcttaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtca 27912055  T
Q  188 aactacgctaggaatttcaggtagttctacaa 219  Q
    ||||||||||||||||||||||||||||||||    
T  27912054 aactacgctaggaatttcaggtagttctacaa 27912023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 41586568 - 41586697
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcca 188  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||    
T  41586568 cccttgcttcccactacaccaagtagctccacaagtttacaccct-aacctcttcaaccatcggaatgccttccgccttcttgaagatgcttgtagtcca 41586666  T
Q  189 actacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||||||||||||||||||    
T  41586667 actacgctaggaatttcaggtagttctacaa 41586697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 28 - 220
Target Start/End: Original strand, 18509907 - 18510102
Alignment:
Q  28 attctccaccttgacttcaaatcagtgatggtgccgat----catcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaag 123  Q
    ||||||||||||||||| |||| ||||||| |||| ||    |||||||| || |||||| |   ||||||||||||||||| |||||||||||||||||    
T  18509907 attctccaccttgactttaaattagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttcccactacaccaagtagctccacaag 18510006  T
Q  124 tttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaat 220  Q
    |||||||| | |||||||||| ||||| ||||| |||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18510007 tttacacctt-aacctcttcaaccatcggaatgccttccgcccttttgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaat 18510102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 165
Target Start/End: Original strand, 20504427 - 20504594
Alignment:
Q  2 aacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgat----catcaacctcc-ttgctgcccaaacccttgct 96  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||    |||||||| || ||||| | |   ||||||||    
T  20504427 aacctgattttaagttaactctcacaattctccacattgacttcaaatcagtgatgatgccaatttaacatcaaccaccattgctactctctcccttgct 20504526  T
Q  97 tcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgcc 165  Q
    || |||||| ||||||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||    
T  20504527 tcgcactacgccaagtagctccacaagtttacaccct-aacctcttcaaccatcggaatgccttccgcc 20504594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 18468633 - 18468509
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc 187  Q
    ||||||||||||||||| ||||||||||||||||||||||| | |  |||| |||||||| || ||||||||||||||||||| ||| | ||||||||||    
T  18468633 cccttgcttcccactacaccaagtagctccacaagtttacagctcataaccccttcagccctcggaatgtcttccgccttctcaaaggtccttgtagtcc 18468534  T
Q  188 aactacgctaggaatttcaggtagt 212  Q
    ||| || |||||| ||| |||||||    
T  18468533 aacaacactaggagttttaggtagt 18468509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 20504660 - 20504744
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||||||||||||||| ||||||||||| | |||| ||||||||||| |||||||||| ||||||||| ||||    
T  20504660 aacctcttcagccatcagaatgtcttcctccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaa 20504744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 219
Target Start/End: Original strand, 18510189 - 18510292
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttct 215  Q
    ||||||||| |||||| | |||| ||||||||||| ||||||||||||||||||||||| | |||| |||| |||||||||||| |||| |||||||||     
T  18510189 tccacaagtatacaccttaaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtctaactacgctaggtattttaggtagttcc 18510288  T
Q  216 acaa 219  Q
    ||||    
T  18510289 acaa 18510292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 40222436 - 40222379
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40222436 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 40222379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 25452165 - 25452111
Alignment:
Q  8 attttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25452165 attttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 25452111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 10756678 - 10756583
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| ||||||||||| |||| |||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  10756678 tccacaagtatacacc-tcaaccacttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 10756583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 15355347 - 15355442
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| |||||||| || ||||||||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  15355347 tccacaagtatacacc-tcaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 15355442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 23666827 - 23666732
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| |||||||| || ||||||||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  23666827 tccacaagtatacacc-tcaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 23666732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 41586801 - 41586885
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| |||||||| || ||||||||||||||||||||||| | |||| ||||||||||| |||||||||| ||||||||| ||||    
T  41586801 aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaa 41586885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 27911935 - 27911833
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttct 215  Q
    ||||||||| |||||| | |||| |||||||| || ||||||||||||||||||||||| | |||| |||| |||||| |||||||||| |||||||||     
T  27911935 tccacaagtatacacctt-aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtctaactacactaggaattttaggtagttcc 27911837  T
Q  216 acaa 219  Q
    ||||    
T  27911836 acaa 27911833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 659505 - 659420
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||| ||| |||||||| ||||||||||| | |||||||||||||||| |||||| ||| ||||||||| ||||    
T  659505 aacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgtagtccaactacactaggagttttaggtagttccacaa 659420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 20044457 - 20044372
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||||||||||||||||| ||||||||||||||||||||||| | |||| ||||||||||| |||| | ||| ||||||||| ||||    
T  20044457 aacctcttcagccatcaaaatgtcttccgccttctcgaagagtccttgcagtccaactacactagaagttttaggtagttccacaa 20044372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 31544504 - 31544423
Alignment:
Q  131 cctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||| ||||||||||| |||| |||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  31544504 cctcaaccacttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 31544423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 34477913 - 34478009
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| ||||||| |||||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  34477913 tccacaagtatacacc-tcaaccacttcagctatcagaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagt 34478009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 20044553 - 20044469
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| ||||||||||| ||||| ||||||||||||||||| | |||| ||||||||||| | |||||||| ||||||||| ||||    
T  20044553 aaccccttcagccatcggaatgacttccgccttctcgaaggtccttgcagtccaactacaccaggaattttaggtagttccacaa 20044469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 6746839 - 6746761
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||||||||||| ||| |||||||| ||||||||||| | |||| |||||||||||||||||| ||| |||||||    
T  6746839 aacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacgctaggatttttaggtagt 6746761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 20044755 - 20044649
Alignment:
Q  30 tctccaccttgacttcaaatcagtgatggtgccgat----catcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtt 125  Q
    ||||||||||||||  |||| |||||||||||| ||    ||||||| || ||||||| |   ||||||||||||||||| |||||||||||||||||||    
T  20044755 tctccaccttgactctaaattagtgatggtgccaatttaacatcaacatc-ttgctgctctttcccttgcttcccactacaccaagtagctccacaagtt 20044657  T
Q  126 tacaccct 133  Q
    || |||||    
T  20044656 tataccct 20044649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 18468490 - 18468412
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||||||||||| |||  ||||||| ||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  18468490 aacctcttcagccatcggaacatcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagt 18468412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 31466704 - 31466770
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctagga 200  Q
    |||||||| ||||||| ||| |||||||| ||||||||||| | |||||||||||||||| ||||||    
T  31466704 aacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgtagtccaactacactagga 31466770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 203; Significance: 1e-111; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 24216 - 23998
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  24216 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttccc 24117  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24116 actactccaagtagctccacaagtttacaccatcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 24017  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  24016 atttcaggtagttctacaa 23998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 23908 - 23813
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| |||||||| || ||||||||||||||||||||||| | |||||||||||||||| |||||| ||| |||||||    
T  23908 tccacaagtatacacc-tcaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgtagtccaactacactaggagttttaggtagt 23813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 36559332 - 36559550
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  36559332 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttccc 36559431  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36559432 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacactagga 36559531  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  36559532 atttcaggtagttctacaa 36559550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 35216184 - 35216375
Alignment:
Q  28 attctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagttta 127  Q
    ||||||||||||||||  |||| ||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35216184 attctccaccttgactctaaattagtgatgatgccaatcatcaacctccttgctgctcaaacccttgcttcccactactccaagtagctccacaagttta 35216283  T
Q  128 caccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35216284 caccctcaacttcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 35216375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 19502524 - 19502741
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||  |||| |||||||||||||||||||| |   ||||||||||||    
T  19502524 aaacctgattttaagttaactatcacaattctccaccttgaattcaaatcagtgataatgccaatcatcaacctccttgctgctctttcccttgcttccc 19502623  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19502624 actactccaagtagctccacaagtttacaccct-aacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 19502722  T
Q  201 atttcaggtagttctacaa 219  Q
     |||||||||| |||||||    
T  19502723 gtttcaggtagctctacaa 19502741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 219
Target Start/End: Original strand, 21518946 - 21519139
Alignment:
Q  30 tctccaccttgacttcaaatcagtgatggtgccgatc----atcaacctcc-ttgctgcccaaacccttgcttcccactactccaagtagctccacaagt 124  Q
    ||||||| |||||||||||||||||||| |||| |||    ||||||| || ||||||| |   ||||||||||||||||| |||||||||| ||||| |    
T  21518946 tctccacattgacttcaaatcagtgatgatgccaatctaacatcaaccaccattgctgctctttcccttgcttcccactacaccaagtagctgcacaatt 21519045  T
Q  125 ttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||||||| | |||| ||||||||||| |||| |||||||||||||||||| | |||| ||||||||||| |||||||||| ||||||||| ||||    
T  21519046 ttacacctt-aaccccttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaa 21519139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 219
Target Start/End: Original strand, 6259329 - 6259550
Alignment:
Q  2 aacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgat----catcaacctcc-ttgctgcccaaacccttgct 96  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||| ||    |||||||| || ||| ||| |   ||||||||    
T  6259329 aacctgattttaagttaactctcttaattctccaccttgactttaaatcagtgatgatgccaatttaacatcaaccaccattgatgctctttcccttgct 6259428  T
Q  97 tcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc-aactacgc 195  Q
    ||||||||  ||| ||||||||||||||||||||||| |||||||||| ||||| ||||| |||| ||| | | |||||| ||||| |||| |||||| |    
T  6259429 tcccactataccatgtagctccacaagtttacaccct-aacctcttcaaccatcggaatgccttctgcccttttgaagatccttgt-gtccaaactactc 6259526  T
Q  196 taggaatttcaggtagttctacaa 219  Q
     |||||||| ||||||||| ||||    
T  6259527 aaggaattttaggtagttccacaa 6259550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 6259562 - 6259646
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||| |||||||||||||||||||||||||    
T  6259562 aacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtatccaaactacactaggaatttcaggtagttctacaa 6259646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 22405148 - 22405232
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||| ||||| ||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||||| ||||    
T  22405148 aacctcttcagccatcggaatggcttccgccttctcgaagatccttgaagtccaactacactaggaattttaggtagttccacaa 22405232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 2740616 - 2740559
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2740616 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 2740559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 22713004 - 22713061
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22713004 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 22713061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 30478688 - 30478631
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30478688 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 30478631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 39686658 - 39686601
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39686658 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 39686601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 17943232 - 17943180
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17943232 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 17943180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 20050533 - 20050589
Alignment:
Q  6 tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20050533 tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 20050589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 35216464 - 35216559
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| |||||||| || ||||||||||||||||||||||| | |||| ||||||||||| |||||| |||||||||||    
T  35216464 tccacaagtatacacc-tcaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagtttcaggtagt 35216559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 13828904 - 13829031
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcca 188  Q
    ||||||||||| ||||| |||||||||||||  ||||| |||||  ||||| |||| |||||||||||||||||||||||| |||||| |||| | ||||    
T  13828904 cccttgcttccaactacaccaagtagctccatgagtttccaccc--aaccttttcaaccatcagaatgtcttccgccttcttgaagattcttgca-tcca 13829000  T
Q  189 actacgctaggaatttcaggtagttctacaa 219  Q
    ||||| |||| ||||| || |||||| ||||    
T  13829001 actacactagaaattttagttagttccacaa 13829031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 31733465 - 31733570
Alignment:
Q  113 agctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||||||  ||||| | |||||||| ||||||| |||||||||| |||||||||||||  ||||||  | |||||| ||||||||||||||||||    
T  31733465 agctccacaagtacacacctt-aacctctttagccatcggaatgtcttctgccttctcgaagaaccttgtatccaaactacactaggaatttcaggtagt 31733563  T
Q  213 tctacaa 219  Q
    |||||||    
T  31733564 tctacaa 31733570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 28462819 - 28462874
Alignment:
Q  2 aacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  28462819 aacctgattttaagttaactttcataattctccaccttgacttcaaatcagtgatg 28462874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 30262268 - 30262326
Alignment:
Q  4 cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||    
T  30262268 cctgattttaagttaactctcacaattctccacctcgacttcaaatcaatgatgatgcc 30262326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 19502830 - 19502925
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| |||||||| || |||||||||||||||||| |||| | |||| ||||||||||| |||||| ||| |||||||    
T  19502830 tccacaagtatacacc-tcaaccccttcagccctcggaatgtcttccgccttcttgaaggttcttgcagtccaactacactaggagttttaggtagt 19502925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 36559639 - 36559734
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| |||||||| || |||| |||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  36559639 tccacaagtatacacc-tcaaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 36559734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 31733680 - 31733760
Alignment:
Q  139 tcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| ||||||| ||||||||||| ||||||| ||| | |||| |||||||||||||||| ||||| ||||||||| ||||    
T  31733680 tctttagccatcggaatgtcttcctccttctcaaaggtccttgcagtccaactacgctagaaatttgaggtagttccacaa 31733760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 21519151 - 21519236
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||| ||||||| ||| |||||| | ||||||||||| | |||| ||||||||||| |||||| ||| ||||||||| ||||    
T  21519151 aacctctttagccatcggaacgtcttctgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagttccacaa 21519236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 30
Target Start/End: Original strand, 21521209 - 21521237
Alignment:
Q  2 aacctgattttaagttaactctcacaatt 30  Q
    |||||||||||||||||||||||||||||    
T  21521209 aacctgattttaagttaactctcacaatt 21521237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 31733348 - 31733388
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttaca 129  Q
    ||||||||| ||||||| ||| |||||||||||||||||||    
T  31733348 cccttgctttccactacaccatgtagctccacaagtttaca 31733388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 41303710 - 41303754
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccct 133  Q
    ||||||||||| ||||| ||||||||||||||||| || ||||||    
T  41303710 cccttgcttccaactacaccaagtagctccacaagcttccaccct 41303754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 47179454 - 47179236
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  47179454 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttccc 47179355  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47179354 actactccaagtagctccacaagtttacaccctcaacttcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 47179255  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  47179254 atttcaggtagttctacaa 47179236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 16228262 - 16228044
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  16228262 aaacctgattttaagttaactcttacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacctccttgctgctcaaacccttgcttccc 16228163  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16228162 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcggaatttcttccgccttctcgaagatgcttgtagtccaactacgctagga 16228063  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  16228062 atttcaggtagttctacaa 16228044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 5 - 219
Target Start/End: Complemental strand, 20302220 - 20302005
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccacta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| |   ||||||||||||||||    
T  20302220 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacatccttgctgctctttcccttgcttcccacta 20302121  T
Q  105 ctccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatt 203  Q
    ||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20302120 ctccaagtagctccacaagtttacacctcttaacctcttcagccatcggaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaatt 20302021  T
Q  204 tcaggtagttctacaa 219  Q
    ||||||||||||||||    
T  20302020 tcaggtagttctacaa 20302005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 51752130 - 51751911
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |   ||||||||||||    
T  51752130 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacctccttgctgctctttcccttgcttccc 51752031  T
Q  101 actactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagg 199  Q
    ||||||||||||| ||||||||||||||||| |  |||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||     
T  51752030 actactccaagtatctccacaagtttacacctcataaccccttcagccctcagaatgtcttccgccttctcgaaggtccttgtagtccaactacgctaga 51751931  T
Q  200 aatttcaggtagttctacaa 219  Q
    ||||||||||||||||||||    
T  51751930 aatttcaggtagttctacaa 51751911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 219
Target Start/End: Complemental strand, 28842256 - 28842040
Alignment:
Q  4 cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccact 103  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||     |||||||||||||||    
T  28842256 cctgattttaagttaactttcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacctccttgctgctatttcccttgcttcccact 28842157  T
Q  104 actccaagtagctccacaagtttacaccctca--acctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaa 201  Q
    |||||||||||||||||||||| ||| |||||  ||| |||||||| || ||||||||||||||||||||||| | |||| ||||||||||| |||||||    
T  28842156 actccaagtagctccacaagttaaca-cctcatgaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaa 28842058  T
Q  202 tttcaggtagttctacaa 219  Q
    ||| ||||||||| ||||    
T  28842057 ttttaggtagttccacaa 28842040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 5 - 219
Target Start/End: Original strand, 14098488 - 14098706
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgat----catcaacctcc-ttgctgcccaaacccttgcttcc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    |||||||| || ||||||| |   | |||||||||    
T  14098488 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatttaacatcaaccgccattgctgctctttcacttgcttcc 14098587  T
Q  100 cactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagg 199  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| | |||| ||||||||||| |||||    
T  14098588 cactacaccaagtagctccacaagtttacaccct-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactagg 14098686  T
Q  200 aatttcaggtagttctacaa 219  Q
    ||||| ||||||||||||||    
T  14098687 aattttaggtagttctacaa 14098706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 219
Target Start/End: Original strand, 28201926 - 28202143
Alignment:
Q  6 tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgat----catcaacctcc-ttgctgcccaaacccttgcttccc 100  Q
    |||||||||||||||||||||||||||||||||||| || ||||||| |||| |||| ||    |||||||| || |||| || |   ||||||||||||    
T  28201926 tgattttaagttaactctcacaattctccaccttgattttaaatcagcgatgatgccaatttaacatcaaccaccattgcagctctttcccttgcttccc 28202025  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc-aactacgctagg 199  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||| ||||||||||| |||||||| | | |||||| ||||| |||| |||||| | |||    
T  28202026 actacaccaagtagctccacaaggttacaccct-aacctcttcaaccatcagaatgccttccgcccttttgaagatccttgt-gtccaaactactcaagg 28202123  T
Q  200 aatttcaggtagttctacaa 219  Q
     |||| ||||||||| ||||    
T  28202124 cattttaggtagttccacaa 28202143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 27337602 - 27337726
Alignment:
Q  96 ttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacg 194  Q
    |||||||||| ||||||||||||||||||||||||| || ||||||||||||| || ||||||||||||||||||||||| | |||| |||||||||||     
T  27337602 ttcccactacaccaagtagctccacaagtttacacctcttaacctcttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactaca 27337701  T
Q  195 ctaggaatttcaggtagttctacaa 219  Q
    |||||| ||| ||||||| ||||||    
T  27337702 ctaggagttttaggtagtcctacaa 27337726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 212
Target Start/End: Original strand, 31736115 - 31736304
Alignment:
Q  28 attctccaccttgacttcaaatcagtgatggtgccgat----catcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaag 123  Q
    ||||||||||||||||  |||| ||||||| |||| ||    |||||||| || |||||| |   ||||||||||||| ||| |||||||||||||||||    
T  31736115 attctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttcccattacaccaagtagctccacaag 31736214  T
Q  124 tttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||| |  |||| |||||||| || ||||||||||||||||||||||| | |||| |||||||||||| ||||||||| |||||||    
T  31736215 tttacacctcataaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacgttaggaattttaggtagt 31736304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 51751808 - 51751720
Alignment:
Q  131 cctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  51751808 cctcaaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgtagtccaactacgctaggaatttcaggtagttctacaa 51751720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 16430645 - 16430538
Alignment:
Q  111 gtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggta 210  Q
    ||||||||||||||  ||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||  | || ||| ||||||||||||||||    
T  16430645 gtagctccacaagtacacacctt-aacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtatccaaattacactaggaatttcaggta 16430547  T
Q  211 gttctacaa 219  Q
    |||||||||    
T  16430546 gttctacaa 16430538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 31423641 - 31423725
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||| ||||||||||| | ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  31423641 aacctcttcagccatcggaatgtcttccacattctcgaagatccttgtagtccaactacgctaggaattttaggtagttctacaa 31423725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 50077398 - 50077482
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||| |||||||  ||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  50077398 aacctctttagccatcgaaatgtcttccgtcttctcgaagatccttgtagtccaactacgctaggaattttaggtagttctacaa 50077482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 25249117 - 25249246
Alignment:
Q  90 ccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc-a 188  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||  |||||||||| |||||||| | | |||||| ||||| |||| |    
T  25249117 ccttgcttcccagtacaccaagtagctccacaagtttacaccct-aacctcttcaatcatcagaatgccttccgcccttttgaagatccttgt-gtccaa 25249214  T
Q  189 actacgctaggaatttcaggtagttctacaat 220  Q
    ||||| | |||||||| ||||||||| |||||    
T  25249215 actactcaaggaattttaggtagttccacaat 25249246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 2393790 - 2393847
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2393790 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 2393847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 9526139 - 9526082
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9526139 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 9526082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 16430432 - 16430348
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| |||||||||||||||||| |||||||||||||||| | |||| |||| ||||||||||||||||| ||||||||| ||||    
T  16430432 aaccccttcagccatcagaatgtgttccgccttctcgaaggtccttgcagtctaactacgctaggaattttaggtagttccacaa 16430348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 25249257 - 25249341
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||| |||||||||||| ||||| |||||| ||||||  | |||||| |||||||||||||||||||||||||    
T  25249257 aacctcttcagccatcggaatgtcttccgtcttcttgaagatccttgtatccaaactacactaggaatttcaggtagttctacaa 25249341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 50077588 - 50077672
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| |||||||| |||||||||||||||||||||||||| | |||| | |||||||||||||||||||| ||||||||| ||||    
T  50077588 aaccccttcagccctcagaatgtcttccgccttctcgaaggtccttgcaatccaactacgctaggaattttaggtagttccacaa 50077672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 13126062 - 13126184
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcca 188  Q
    ||||||||||||| ||| ||| |||||||||||||||| ||||  ||||||||||| |||||||| |  ||||| |||||| |||||| |||| | | ||    
T  13126062 cccttgcttcccattacaccatgtagctccacaagtttccacc--caacctcttcaaccatcagatttccttccaccttcttgaagatccttgca-tgca 13126158  T
Q  189 actacgctaggaatttcaggtagttc 214  Q
    |||||||||||||||| |||||||||    
T  13126159 actacgctaggaattttaggtagttc 13126184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 155448 - 155235
Alignment:
Q  8 attttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgat-----catcaacctccttgctgcccaaacccttgcttcccac 102  Q
    ||||| |||||| |||||  | ||||||||||||||  |||| ||||||| |||| ||     |||||||| ||| | |||||   |||||||| |||||    
T  155448 attttgagttaattctcaacaatctccaccttgactctaaataagtgatgatgccaatttaaccatcaaccacctcggtgccctttcccttgctccccac 155349  T
Q  103 tactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaat 202  Q
    ||| ||| |||||||||||||||| ||||  ||||||||||| ||||| ||||| |||| ||||||| | ||||  ||| | ||||||||| ||||||||    
T  155348 tacaccatgtagctccacaagtttccacc--caacctcttcaaccatcggaatgccttctgccttcttggagattattgca-tccaactacactaggaat 155252  T
Q  203 ttcaggtagttctacaa 219  Q
    || ||||||||| ||||    
T  155251 tttaggtagttccacaa 155235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 30 - 219
Target Start/End: Original strand, 50077195 - 50077386
Alignment:
Q  30 tctccaccttgacttcaaatcagtgatggtgccgat----catcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtt 125  Q
    ||||||||||||||  |||| ||||||| |||| ||    |||||||| ||||||||| |   |||||  |||||||||| |||||||||||||||||||    
T  50077195 tctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccttgctgctctttccctta-ttcccactacaccaagtagctccacaagtt 50077293  T
Q  126 tacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc-aactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||| |||||||||| |||||  |||| |||||||| | | |||||| ||||| |||| |||||| | |||||||| ||||||||| ||||    
T  50077294 tacaccct-aacctcttcaaccatcgaaatgccttccgcccttttgaagatccttgt-gtccaaactactcaaggaattttaggtagttccacaa 50077386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 6997012 - 6996928
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| |||||||| || ||||||||||||||||||||||| | |||| ||||||||||| |||||||||| ||||||||| ||||    
T  6997012 aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaa 6996928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 13126201 - 13126284
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| | ||||||||| ||| |||||| ||||||||| ||||    
T  13126201 aacctcttcagccatcagaatgtcttccgccttgtcgaagatccttgca-tccaactacactaagaattttaggtagttccacaa 13126284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 47179147 - 47179052
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| ||||||||||| |||| |||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  47179147 tccacaagtatacacc-tcaaccacttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 47179052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 8347833 - 8347970
Alignment:
Q  30 tctccaccttgacttcaaatcagtgatggtgccgat----catcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtt 125  Q
    ||||||||||||||  |||| ||||||| |||| ||    |||||||| || |||||| |   ||||||||||||||||| |||||||||||||||||||    
T  8347833 tctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttcccactacaccaagtagctccacaagtt 8347932  T
Q  126 tacaccctcaacctcttcagccatcagaatgtcttccgcc 165  Q
    ||||||   |||||||||| ||||| ||||| ||||||||    
T  8347933 tacacc--aaacctcttcaaccatcggaatgccttccgcc 8347970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 16227935 - 16227857
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||| |||||||||||||||| ||||||||||||||||||| | |||||||||||||||| |||||| ||| |||||||    
T  16227935 aaccacttcagccatcagaatatcttccgccttctcgaagagtccttgtagtccaactacactaggagttttaggtagt 16227857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 28202155 - 28202239
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| ||||||||  | ||||||||||||||||||||||| | |||| ||||||||||| |||||||||| ||||||||| ||||    
T  28202155 aaccccttcagcccacggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagttccacaa 28202239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 8954335 - 8954236
Alignment:
Q  66 catcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgcc 165  Q
    |||||||| ||||||||| |   ||||||||||||||||| ||||||||||||||||||||||||| |  || |||||| ||||  ||||| ||||||||    
T  8954335 catcaaccaccttgctgctctttcccttgcttcccactacaccaagtagctccacaagtttacacctt--acgtcttcaaccattggaatgccttccgcc 8954238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 20301914 - 20301829
Alignment:
Q  118 cacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 204  Q
    ||||||| |||||| | |||| |||||||| || ||||||||||||||||||||||| | |||| || |||||||||||||||||||    
T  20301914 cacaagtatacacctt-aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagcccaactacgctaggaattt 20301829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 220
Target Start/End: Complemental strand, 25127292 - 25127206
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaat 220  Q
    |||||||||||||||| ||| |||||||||||||| ||||| | |||| ||||||||||| |||||| ||| ||||||||| |||||    
T  25127292 aacctcttcagccatcggaacgtcttccgccttcttgaagagtccttgcagtccaactacactaggagttttaggtagttccacaat 25127206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 25127530 - 25127438
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgt 182  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||| |||||||||| ||||| ||||| ||| |||| | | |||||| |||||    
T  25127530 cccttgcttcccactacaccatgtagcttcacaagtttacaccct-aacctcttcaaccatcggaatgcctttcgcccttttgaagatccttgt 25127438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 31423830 - 31423914
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| |||||||| || ||||||||||||||||||||||| | |||  ||||||||||| |||| ||||| ||||||||| ||||    
T  31423830 aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttacagtccaactacactagaaattttaggtagttccacaa 31423914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 25127371 - 25127304
Alignment:
Q  152 gaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||||||||||||||||||||||| |  ||| ||||||||||| |||||||||| ||||||||| ||||    
T  25127371 gaatgtcttccgccttctcgaaggtctttgcagtccaactacactaggaattttaggtagttccacaa 25127304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 25249451 - 25249530
Alignment:
Q  140 cttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||| || ||||||||| | ||||||||||| |  ||| |||||||||||||||||||||| ||||||||| ||||    
T  25249451 cttcagccctcggaatgtctttcaccttctcgaaggtcgttgcagtccaactacgctaggaattttaggtagttccacaa 25249530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 219
Target Start/End: Original strand, 31423512 - 31423629
Alignment:
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc-aactacgctagg 199  Q
    ||||| ||||||||||||||||||||||| ||| |||||||| | ||||| |||||||||||||| | | ||||||  |||| |||| |||||| | |||    
T  31423512 actacaccaagtagctccacaagtttaca-ccttaacctctttaaccatcggaatgtcttccgcccttttgaagatctttgt-gtccaaactactcaagg 31423609  T
Q  200 aatttcaggtagttctacaa 219  Q
    ||||| ||||||||| ||||    
T  31423610 aattttaggtagttccacaa 31423629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 31736323 - 31736401
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||||||||||| ||| |||||||| ||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  31736323 aacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagt 31736401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 8954197 - 8954090
Alignment:
Q  111 gtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggta 210  Q
    ||||||||||||||  ||||| | ||||||||||| ||||  |||||||||| ||||||| || || ||||||  | ||||||  ||||||||||| |||    
T  8954197 gtagctccacaagtacacacctt-aacctcttcagtcatcgaaatgtcttccaccttctcaaaaatccttgtatccaaactacaataggaatttcacgta 8954099  T
Q  211 gttctacaa 219  Q
    |||||||||    
T  8954098 gttctacaa 8954090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 204
Target Start/End: Complemental strand, 10742329 - 10742240
Alignment:
Q  112 tagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 204  Q
    ||||||||||| ||| |||||  |||||||||| ||||| ||||| ||| |||||||| |||||| |||| | ||||||||| ||||||||||    
T  10742329 tagctccacaaatttccaccc--aacctcttcaaccatcggaatgcctttcgccttcttgaagatccttgca-tccaactacactaggaattt 10742240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 16430760 - 16430721
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttac 128  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  16430760 cccttggttcccactacaccaagtagctccacaagtttac 16430721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 219
Target Start/End: Complemental strand, 6997214 - 6997024
Alignment:
Q  28 attctccaccttgacttcaaatcagtgatggtgccgat----catcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaag 123  Q
    ||||||||||||||||  |||| ||||||| |||| ||    |||||||| || |||||| |    |||||||||||||||  |||||| ||| ||||||    
T  6997214 attctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccgtgctgctctttaccttgcttcccactataccaagttgcttcacaag 6997115  T
Q  124 tttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc-aactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||| |||||||    ||||| ||||| |||||||| | | |||||| ||||| |||| |||||| | ||| |||| ||||||||| ||||    
T  6997114 tttacaccct-aacctct----ccatcggaatgccttccgcccttttgaagatccttgt-gtccaaactactcaaggcattttaggtagttccacaa 6997024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 14098718 - 14098803
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||||| || ||||||| ||| ||||||||  |||||||||| | |||| ||||||||||| |||||| ||| ||||||||| ||||    
T  14098718 aacctttttagccatcggaacgtcttccgttttctcgaagagtccttgcagtccaactacactaggagttttaggtagttccacaa 14098803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 13761603 - 13761575
Alignment:
Q  1 aaacctgattttaagttaactctcacaat 29  Q
    |||||||||||||||||||||||||||||    
T  13761603 aaacctgattttaagttaactctcacaat 13761575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 47177104 - 47177076
Alignment:
Q  1 aaacctgattttaagttaactctcacaat 29  Q
    |||||||||||||||||||||||||||||    
T  47177104 aaacctgattttaagttaactctcacaat 47177076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 16932334 - 16932551
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  16932334 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgctgctcaaacccttgcttccc 16932433  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16932434 actactccaagtagctccacaagtttacaccct-aacctcttcagccatcggaatgtcttccgtcttctcgaagatgcttgtagtccaactacgctagga 16932532  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  16932533 atttcaggtagttctacaa 16932551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 2 - 219
Target Start/End: Original strand, 9174659 - 9174876
Alignment:
Q  2 aacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccca 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||    
T  9174659 aacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccgatcatcaacctccttgttgctcaaacccttgcttccca 9174758  T
Q  102 ctactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaa 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  9174759 ctactccaagtagctccacaagtttacaccctcaacctcttcagccatcggaatgtcttctgccttctcgaagatgcttggagtccaactacgctaggaa 9174858  T
Q  202 tttcaggtagttctacaa 219  Q
    ||||||||||||||||||    
T  9174859 tttcaggtagttctacaa 9174876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 11006755 - 11006973
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||    
T  11006755 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgtcgatcatcaacctccttgctgctcaaacccttgcttccc 11006854  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  11006855 actattccaagtagctccacaagtttacaccttcaacctcttcagccatcggaatatcttctgccttctcgaagatgcttgtagttcaactacgctagga 11006954  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  11006955 atttcaggtagttctacaa 11006973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 22780926 - 22781142
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||   ||||||||||||| ||||||||||||||||    
T  22780926 aaacctgattttaagttaactctcacaattctccaccttgacttcaaattagtgatgatgccgatca---acctccttgctgctcaaacccttgcttccc 22781022  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtctt-ccgccttctcgaagatgcttgtagtccaactacgctagg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22781023 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcggaatgtcttcccgccttctcgaagatgcttgtagtccaactacgctagg 22781122  T
Q  200 aatttcaggtagttctacaa 219  Q
    ||||||||||||||||||||    
T  22781123 aatttcaggtagttctacaa 22781142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 6 - 219
Target Start/End: Original strand, 22044909 - 22045121
Alignment:
Q  6 tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccactac 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||| ||| |   |||||||||||||||||    
T  22044909 tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaaccaccttgttgctctttcccttgcttcccactac 22045008  T
Q  106 tccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttc 205  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22045009 tccaagtagctccacaagtttacaccct-aacctcttcagccatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttc 22045107  T
Q  206 aggtagttctacaa 219  Q
    ||||||||||||||    
T  22045108 aggtagttctacaa 22045121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 28 - 219
Target Start/End: Original strand, 22132987 - 22133178
Alignment:
Q  28 attctccaccttgacttcaaatcagtgatggtgccgatc-atcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagttt 126  Q
    |||||||||||||||| |||||  |||||| || | | | ||||||| ||||||||| |   ||||||||||||||||| ||||||||||||||||||||    
T  22132987 attctccaccttgactccaaatttgtgatgatgtcaaaccatcaaccaccttgctgctctttcccttgcttcccactacaccaagtagctccacaagttt 22133086  T
Q  127 acaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22133087 acaccct-aacctcttcagccatcaaaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 22133178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 2 - 219
Target Start/End: Original strand, 36920100 - 36920315
Alignment:
Q  2 aacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccca 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| ||||||||| |   |||||||||| ||    
T  36920100 aacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaattatcaaccaccttgctgctctttcccttgcttctca 36920199  T
Q  102 ctactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc-aactacgctagga 200  Q
    |||  | ||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||| | | |||||| ||||| |||| |||||| | ||||    
T  36920200 ctatactaagtagctccacaagtttacaccct-aacctcttcaaccatcggaatgccttccgcccttttgaagatccttgt-gtccaaactactcaagga 36920297  T
Q  201 atttcaggtagttctacaa 219  Q
    |||| ||||||||| ||||    
T  36920298 attt-aggtagttccacaa 36920315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 22801354 - 22801554
Alignment:
Q  18 aactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccactactccaagtagctc 117  Q
    |||||||||||||||| ||||||||||||||||||||| | |||| |||||||||||||||||||| |   ||||||||||||||||| |||||||||||    
T  22801354 aactctcacaattctctaccttgacttcaaatcagtgaagatgccaatcatcaacctccttgctgctctttcccttgcttcccactacaccaagtagctc 22801453  T
Q  118 cacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc-aactacgctaggaatttcaggtagttcta 216  Q
    |||||||||||||||| | |||||||| ||||| ||||| |||||||| | | |||||| ||||| |||| |||||| | ||| |||| ||||||||| |    
T  22801454 cacaagtttacaccct-atcctcttcaaccatcggaatgccttccgcccttttgaagatccttgt-gtccaaactactcaaggtattttaggtagttcca 22801551  T
Q  217 caa 219  Q
    |||    
T  22801552 caa 22801554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 3825086 - 3825310
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgat----catcaacctcc-ttgctgcccaaacccttgc 95  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||  |    |||||||| || ||||||| |   |||||||    
T  3825086 aaacctgattttaagttaactctcacaattgtcaaccttgacttcaaatcagtgatgatgccactttaacatcaaccaccattgctgctctttcccttgc 3825185  T
Q  96 ttcccactactccaagtagctccacaagtttacaccc-tcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacg 194  Q
    ||||  |||| ||||||| |||||||||||||||||| | || | |||||||| |||||||||||||||||||||||||| | |||| ||||||||||      
T  3825186 ttcctgctacaccaagtaactccacaagtttacaccccttaaacccttcagccctcagaatgtcttccgccttctcgaaggtccttgcagtccaactata 3825285  T
Q  195 ctaggaatttcaggtagttctacaa 219  Q
    ||| |||||| ||||||||| ||||    
T  3825286 ctatgaattttaggtagttccacaa 3825310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 12401409 - 12401538
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcca 188  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| | |||| ||||||    
T  12401409 cccttgcttcccactacaccaagtagctccacaagtttacaccct-aaccccgtcagccatcagaatgtcttccgccttctcgaaggtccttgcagtcca 12401507  T
Q  189 actacgctaggaatttcaggtagttctacaa 219  Q
    ||||  |||||||||| ||||||||| ||||    
T  12401508 actaaactaggaattttaggtagttccacaa 12401538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 12396467 - 12396596
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcca 188  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||||||| ||||||||||||||||||||||| | |||| ||||||    
T  12396467 cccttgcttcccactacaccaagtagctccacaagtttacaccct-aaccccgtcagccatctgaatgtcttccgccttctcgaaggtccttgcagtcca 12396565  T
Q  189 actacgctaggaatttcaggtagttctacaa 219  Q
    ||||  |||||||||| ||||||||| ||||    
T  12396566 actaaactaggaattttaggtagttccacaa 12396596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 24880283 - 24880116
Alignment:
Q  2 aacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgat----catcaacctcc-ttgctgcccaaacccttgct 96  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||    |||||||| || ||||||| |   || |||||    
T  24880283 aacctgattttaagttaactttcacaattctccaccttgacttcaaatcagtgatgatgccaatttaacatcaaccaccattgctgctccttcctttgct 24880184  T
Q  97 tcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgcc 165  Q
    | ||||| | ||||||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||    
T  24880183 ttccactgcaccaagtagctccacaagtttacaccct-aacctcttcaaccatcggaatgccttccgcc 24880116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 5100538 - 5100455
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  5100538 aacctcttcagccatcggaatgtcttccgccttttcgat-atgcttgtagtccaactacgctaggaatttcaggtagttctacaa 5100455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 16455047 - 16454857
Alignment:
Q  30 tctccaccttgacttcaaatcagtgatggtgccgat----catcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtt 125  Q
    |||||||||||||| ||||| ||||||| |||| ||    |||||||  ||||||||| |   ||||||||| | ||||| |||||||||||||||||||    
T  16455047 tctccaccttgactccaaattagtgatgatgccaatttaacatcaaca-ccttgctgctctttcccttgctttctactacaccaagtagctccacaagtt 16454949  T
Q  126 tacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    | |||| | |||| |||||| |||| |||||||||| |||||||||||| | |||| ||||||||||| ||| |||||| ||||||||| ||||    
T  16454948 ttcacctt-aacc-cttcagtcatcggaatgtcttctgccttctcgaaggtccttgcagtccaactacactaagaattttaggtagttccacaa 16454857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 36920332 - 36920411
Alignment:
Q  140 cttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||||| ||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||||||| ||||    
T  36920332 cttcaaccatcagaatgtcttccgccttctcgaaggtccttgcagtccaactacgctaggaattttaggtagttccacaa 36920411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 4569746 - 4569688
Alignment:
Q  4 cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  4569746 cctgattttaagttaactctcacaattctccaccttgacttcaaattagtgatgatgcc 4569688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 47564295 - 47564217
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagtt 213  Q
    |||| |||||||||||||||| | |||||||||||||||| | |||| |||||||||||||||||||||| ||||||||    
T  47564295 aaccccttcagccatcagaatattttccgccttctcgaaggtccttgcagtccaactacgctaggaattttaggtagtt 47564217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 11007062 - 11007158
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| |||||||||||||||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  11007062 tccacaagtatacacc-tcaaccacttcagccatcagaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagt 11007158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 15316652 - 15316595
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  15316652 ctgattttaagttaactctcacaattcttcaccttgacttcaaatcagtgatgatgcc 15316595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 4884553 - 4884501
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4884553 ctgattttaagttaactctcacaattctccacattgacttcaaatcagtgatg 4884501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 5100678 - 5100603
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgcc 165  Q
    ||||||||||||||||| |||||||||| |||||||||||||||| |||||||||| ||||| ||||| ||||||||    
T  5100678 cccttgcttcccactacaccaagtagcttcacaagtttacaccct-aacctcttcaaccatcggaatgccttccgcc 5100603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 14788086 - 14788161
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgcc 165  Q
    ||||||||||||||||| |||||||| | |||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  14788086 cccttgcttcccactacaccaagtagtttcacaagtttacaccct-aacctcttcaaccatcggaatgtcttccgcc 14788161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 22045210 - 22045305
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| |||||||| || ||||||||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  22045210 tccacaagtatacacc-tcaaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 22045305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 16638574 - 16638519
Alignment:
Q  2 aacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  16638574 aacctgattttatgttaactctcacaattctccaccttgacttcaaatgagtgatg 16638519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 22781231 - 22781327
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||| | ||||||||||| |||||||||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  22781231 tccacaagtatacacc-tcaatcccttcagccatcggaatgtcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagt 22781327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 24880047 - 24879966
Alignment:
Q  138 ctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||| ||| |||||||||||||| ||||||||||| | |||| ||||||||||| |||||||||| ||||||||| ||||    
T  24880047 ctcttctgccttcagaatgtcttccaccttctcgaaggtccttgcagtccaactactctaggaattttaggtagttccacaa 24879966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 9174965 - 9175060
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| | |||| |||||||| || |||| |||||||||||||||||| | |||| ||||||||||| |||||||||| |||||||    
T  9174965 tccacaagtatacacctt-aaccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggaattttaggtagt 9175060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 111 - 219
Target Start/End: Complemental strand, 36379979 - 36379872
Alignment:
Q  111 gtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggta 210  Q
    ||||||||||||||  ||||| | |||||||| ||| ||| |||||||||| |||||||||||||| ||||||  | |||||| |||||||||||| |||    
T  36379979 gtagctccacaagtacacacctt-aacctctttagctatcggaatgtcttctgccttctcgaagatccttgtatccaaactacactaggaatttcaagta 36379881  T
Q  211 gttctacaa 219  Q
     ||||||||    
T  36379880 attctacaa 36379872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 47564459 - 47564364
Alignment:
Q  66 catcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttcc 162  Q
    |||||||| ||||||||| |   ||||||||| ||||||| |||||||||||||| |||||||||| | |||||||||| ||||| |||||||||||    
T  47564459 catcaaccaccttgctgctctttcccttgctttccactacaccaagtagctccacgagtttacaccat-aacctcttcaaccatcggaatgtcttcc 47564364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 18535402 - 18535519
Alignment:
Q  90 ccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaa 189  Q
    ||||||||||||||||  || ||||||||||||||||||||| |  ||||||||||||||  ||||| |||||||| ||| |||||| |||| | |||||    
T  18535402 ccttgcttcccactacatcatgtagctccacaagtttacacctt--acctcttcagccattggaatgccttccgcc-tcttgaagattcttgca-tccaa 18535497  T
Q  190 ctacgctaggaatttcaggtag 211  Q
    |||| |||| ||||| ||||||    
T  18535498 ctacactagaaattttaggtag 18535519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 36380096 - 36380023
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccg 163  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||| |||||||||| ||||| ||||| ||||||    
T  36380096 cccttgcttcccactagaccaagtagctccacaagtttacaacct-aacctcttcaaccatcggaatgccttccg 36380023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 14788227 - 14788311
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| |||||| | || ||||||||||||||||||||||| | |||| |||||| |||| |||||||||| ||||||||| ||||    
T  14788227 aaccccttcagacctcggaatgtcttccgccttctcgaaggtccttgcagtccatctacactaggaattttaggtagttccacaa 14788311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 22048554 - 22048598
Alignment:
Q  6 tgattttaagttaactctcacaattctccaccttgacttcaaatc 50  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  22048554 tgattttaagttaactctcacaattctccaacttgacttcaaatc 22048598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 22801566 - 22801650
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| |||| ||| || ||||||||||||||||||||||  | |||| ||||||||||| |||||||||| ||||||||| ||||    
T  22801566 aaccccttctgccctcggaatgtcttccgccttctcgaatgtccttgcagtccaactacactaggaattttaggtagttccacaa 22801650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 16932660 - 16932738
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||| ||||||||||| |||| ||||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  16932660 aaccacttcagccatcggaatatcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagt 16932738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 16454845 - 16454760
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||| ||| || |||||||||||| |||| | |||| ||||||||||| |||||| ||| ||||||||| ||||    
T  16454845 aacctcttcagccatcggaacgttttccgccttctcaaagagtccttgcagtccaactacactaggagttttaggtagttccacaa 16454760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 18535539 - 18535592
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcca 188  Q
    |||| ||||||||||| ||||||||||||||||||||||| | |||||||||||    
T  18535539 aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgtagtcca 18535592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 18535631 - 18535710
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttc 214  Q
    |||||||||||||||| | | ||||||||| |||| |||||  |||| ||||||||||| |||||||||| | |||||||    
T  18535631 aacctcttcagccatcgggacgtcttccgcgttctagaagagccttgcagtccaactacactaggaattttatgtagttc 18535710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 36379783 - 36379681
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttct 215  Q
    ||||||||| |||||| | |||| ||| ||||||| |||||  ||||| |||||||||| | |||| |||||||||||||| | ||||| |||||||||     
T  36379783 tccacaagtatacacctt-aacccctttagccatcggaatgatttccgtcttctcgaaggtccttgcagtccaactacgctggcaattttaggtagttcc 36379685  T
Q  216 acaa 219  Q
    ||||    
T  36379684 acaa 36379681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 3825322 - 3825388
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctagga 200  Q
    |||||||||||||||| ||| |||||||| ||||||||||| | |||| ||||||||||| ||||||    
T  3825322 aacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactagga 3825388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 12396608 - 12396693
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||| ||| ||||| || |||||| |||| | |||| ||||||||||| |||||| ||| ||| ||||| ||||    
T  12396608 aacctcttcagccatcggaacgtctttcgtcttctctaagagtccttgcagtccaactacactaggagttttaggcagttccacaa 12396693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 12401550 - 12401635
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||| ||| ||||| || |||||| |||| | |||| ||||||||||| |||||| ||| ||| ||||| ||||    
T  12401550 aacctcttcagccatcggaacgtctttcgtcttctctaagagtccttgcagtccaactacactaggagttttaggcagttccacaa 12401635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 47747370 - 47747342
Alignment:
Q  28 attctccaccttgacttcaaatcagtgat 56  Q
    |||||||||||||||||||||||||||||    
T  47747370 attctccaccttgacttcaaatcagtgat 47747342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 43081748 - 43081530
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| ||||||||||||||||    
T  43081748 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcaatgatgatgccgatcatcaacctcctttctgctcaaacccttgcttccc 43081649  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43081648 actactccaagtagctccacaagtttacaccctcaacctcttcagtaatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 43081549  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  43081548 atttcaggtagttctacaa 43081530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 18812694 - 18812477
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |   ||||||||||||    
T  18812694 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacctccttgctgctctttcccttgcttccc 18812595  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18812594 actactccaagtagctccacaagtttacaccct-aacctctccagccatcggaatgtcttccgccttcttgaagatgcttgtagtccaactacgctagga 18812496  T
Q  201 atttcaggtagttctacaa 219  Q
    |||| ||||||||||||||    
T  18812495 atttaaggtagttctacaa 18812477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 4 - 219
Target Start/End: Complemental strand, 27829116 - 27828900
Alignment:
Q  4 cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccact 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| |   |||||||||||||||    
T  27829116 cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacatccttgctgctctttcccttgcttcccact 27829017  T
Q  104 actccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaat 202  Q
    |||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27829016 actccaagtagctccacaagtttacacctcttaacctcttcagccatcggaatgtcttccgccttctcgaagatccttgtagtccaactacgctaggaat 27828917  T
Q  203 ttcaggtagttctacaa 219  Q
    |||||||||||||||||    
T  27828916 ttcaggtagttctacaa 27828900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 5 - 219
Target Start/End: Complemental strand, 15072528 - 15072310
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatc----atcaacctcc-ttgctgcccaaacccttgcttcc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    ||||||| || ||||||      |||||||||||    
T  15072528 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatctaacatcaaccaccattgctgttatctcccttgcttcc 15072429  T
Q  100 cactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagg 199  Q
    |||||| |||||||||||||||||||||||| || |||| ||||||||||| |||| ||||||| |||||||||| | |||| ||||||||||| |||||    
T  15072428 cactacaccaagtagctccacaagtttacactct-aaccccttcagccatcggaatatcttccgtcttctcgaaggtccttgcagtccaactacactagg 15072330  T
Q  200 aatttcaggtagttctacaa 219  Q
    ||||| ||||||||| ||||    
T  15072329 aattttaggtagttccacaa 15072310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 41384427 - 41384298
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcca 188  Q
    ||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  41384427 cccttgcttcccactacaccaagtagcttcacaagtttacaccct-aacctcttcagccatcggaatgtcttccgccttctcgaagatgtttgtagtcca 41384329  T
Q  189 actacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||| ||||||||||||||||||||    
T  41384328 actacgctagaaatttcaggtagttctacaa 41384298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 4812996 - 4813053
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4812996 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 4813053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 25684318 - 25684266
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25684318 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 25684266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 41384210 - 41384108
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttct 215  Q
    ||||||||| |||||| |||||| |||||| | |||||||||||||||||||||||||| | |||| |||| |||||||||||| |||| |||||||||     
T  41384210 tccacaagtatacacc-tcaaccccttcagtcctcagaatgtcttccgccttctcgaaggtccttgaagtctaactacgctaggtattttaggtagttcc 41384112  T
Q  216 acaa 219  Q
    ||||    
T  41384111 acaa 41384108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 17849466 - 17849338
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcca 188  Q
    ||||||||||| ||||| ||||||| |||||||||||| || |||   |||||||| ||||| ||||| |||||||||||| |||||| |||| | ||||    
T  17849466 cccttgcttccaactacaccaagtatctccacaagtttccatcct-tgcctcttcaaccatcggaatgccttccgccttcttgaagatccttgca-tcca 17849369  T
Q  189 actacgctaggaatttcaggtagttctacaa 219  Q
    ||||| |||||||||| ||||||||| ||||    
T  17849368 actacactaggaattttaggtagttccacaa 17849338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 15072298 - 15072213
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||||||| |||||||| ||||||||||| | |||| ||||||||||| |||||| ||| ||||||||||||||    
T  15072298 aacctcttcagccatcagaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagttctacaa 15072213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 28332306 - 28332249
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  28332306 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagcgatgatgcc 28332249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 590488 - 590436
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  590488 ctgattttaagttaactctcacaattcttcaccttgacttcaaatcagtgatg 590436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 3275974 - 3275922
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3275974 ctgattttaagttaactctcgcaattctccaccttgacttcaaatcagtgatg 3275922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 43081427 - 43081347
Alignment:
Q  131 cctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtag 211  Q
    |||||||| |||||||||||||||| |||||||||||||||||| | |||| ||||||||||| |||||| ||| ||||||    
T  43081427 cctcaaccacttcagccatcagaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtag 43081347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 27828791 - 27828714
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||| |||||||| || |||||||||| |||||||||||| | |||||||||||||||| |||||||||| |||||||    
T  27828791 aaccccttcagccctcggaatgtcttctgccttctcgaaggtccttgtagtccaactacactaggaattttaggtagt 27828714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 28895172 - 28895123
Alignment:
Q  8 attttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28895172 attttaagttaagtctcacaattctccaccttgacttcaaatcagtgatg 28895123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 16753030 - 16753082
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  16753030 ctgattttaagttaagtctcacaattctccaccttgacttcaaattagtgatg 16753082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 176
Target Start/End: Original strand, 31574293 - 31574400
Alignment:
Q  67 atcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgcct 166  Q
    ||||||| ||||||||| |   |||| |||||| ||||| |||||||||||||||||||| ||||  ||||||||||| || ||  ||||||||||||||    
T  31574293 atcaaccaccttgctgctctttccctcgcttccaactacaccaagtagctccacaagtttccacc--caacctcttcaaccttcgaaatgtcttccgcct 31574390  T
Q  167 tctcgaagat 176  Q
    ||| ||||||    
T  31574391 tcttgaagat 31574400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 21482121 - 21481982
Alignment:
Q  30 tctccaccttgacttcaaatcagtgatggtgccgat----catcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtt 125  Q
    ||||||||||||||  |||| ||||||| |||| ||    |||||||| || |||||| |   ||||||||||||||||| ||| |||||||||||||||    
T  21482121 tctccaccttgactctaaattagtgatgatgccaatttaacatcaaccaccatgctgctctttcccttgcttcccactacaccatgtagctccacaagtt 21482022  T
Q  126 tacaccctcaacctcttcagccatcagaatgtcttccgcctt 167  Q
    |||||| |  ||||||||| | ||  ||||| ||||||||||    
T  21482021 tacacctt--acctcttcaactattggaatgccttccgcctt 21481982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 14418788 - 14418838
Alignment:
Q  169 tcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||| |||| | |||||||||||||||||||||| ||||||||||||    
T  14418788 tcgaagatccttgcaatccaactacgctaggaatttcatgtagttctacaa 14418838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 44720643 - 44720614
Alignment:
Q  1 aaacctgattttaagttaactctcacaatt 30  Q
    ||||||||||||||||||||||||||||||    
T  44720643 aaacctgattttaagttaactctcacaatt 44720614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 6063980 - 6064198
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||    
T  6063980 aaacctgattttaagttaattctcacaattctccaccttgacttcaaatcagtgatgatgtcgatcagcaacctccttgctgctcaaacccttgcttccc 6064079  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  6064080 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcggaatatcttccgccttctcgaagatgcttgtagtccaactacactagga 6064179  T
Q  201 atttcaggtagttctacaa 219  Q
    |||||||||||||||||||    
T  6064180 atttcaggtagttctacaa 6064198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 7606937 - 7607156
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |   ||||||||||||    
T  7606937 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaacctccttgctgctctttcccttgcttccc 7607036  T
Q  101 actactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagg 199  Q
    ||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  7607037 actactccaagtagctccacaagtttatacctcttaacctcttcagccatcagaatgtcttccgccttctcgaagatccttgtagtccaactacgccagg 7607136  T
Q  200 aatttcaggtagttctacaa 219  Q
    ||||||||||||||||||||    
T  7607137 aatttcaggtagttctacaa 7607156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 6 - 219
Target Start/End: Complemental strand, 11170166 - 11169954
Alignment:
Q  6 tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccactac 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||| |   |||||||||||||||||    
T  11170166 tgattttaagttaactctcacaattctccaccttgacttcaaatcaatgatgatgccaatcatcaacctccttgctgctctttcccttgcttcccactac 11170067  T
Q  106 tccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttc 205  Q
    || ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  11170066 tctaagtagctccacaagtttaca-cctcaacctcttcagccatcggaatgtcttccgccttcatgaagatgcttgtagtccaactacgctaggaatttc 11169968  T
Q  206 aggtagttctacaa 219  Q
    ||||||||||||||    
T  11169967 aggtagttctacaa 11169954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 28 - 219
Target Start/End: Complemental strand, 457950 - 457759
Alignment:
Q  28 attctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagttta 127  Q
    ||||||||||||||||  |||| ||| ||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  457950 attctccaccttgactctaaattagtaatgatgccaatcatcaacctccttgctgctcaaacccttgcttcccactactccaagtagctccacaagttta 457851  T
Q  128 caccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  457850 cactctcaacctcttcagcgatcggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 457759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 4 - 219
Target Start/End: Original strand, 10956540 - 10956754
Alignment:
Q  4 cctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccact 103  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||| |   || ||||||||||||    
T  10956540 cctgattttaagttaactctcacaattatccaccttgacttcaaatcagtgatgatgccaatcatcaacctccttgctgctctttccattgcttcccact 10956639  T
Q  104 actccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatt 203  Q
    || ||| ||||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10956640 acaccatgtagctccacaagtttacaccct-agcctcttcagccattggaatgtcttccgccttctcgaagatgcttgtagtccaactacgctacgaatt 10956738  T
Q  204 tcaggtagttctacaa 219  Q
    ||||||||||||||||    
T  10956739 tcaggtagttctacaa 10956754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 5899470 - 5899266
Alignment:
Q  14 agttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccactactccaagta 113  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||||||||     |||||||||||||||||||||||||    
T  5899470 agttaactctcacaattctccaccttgacttcaaatcagtgacgatgccaatcattaacctccttgctgctatttcccttgcttcccactactccaagta 5899371  T
Q  114 gctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagtt 213  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  5899370 actccacaagtttacaccct-aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactatgctaggaatttcagatagtt 5899272  T
Q  214 ctacaa 219  Q
    ||||||    
T  5899271 ctacaa 5899266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 18097396 - 18097613
Alignment:
Q  1 aaacctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttccc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||| |||||||||| ||||||||| |   ||||||||||||    
T  18097396 aaacctgattttaagttaactctcacaattctccaccttgactttaaatcagggatgatgccaatcatcaaccaccttgctgctctttcccttgcttccc 18097495  T
Q  101 actactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctagga 200  Q
    ||||| ||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||||| ||||||||||| | |||| |||||||||| |||||||    
T  18097496 actacaccaagtagctccacaagtttaca-cctccaccccttcagccatcggaatgtcttccaccttctcgaaggtccttgcagtccaactaggctagga 18097594  T
Q  201 atttcaggtagttctacaa 219  Q
    |||| ||||||||| ||||    
T  18097595 attttaggtagttccacaa 18097613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 210
Target Start/End: Original strand, 4308796 - 4309002
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccacta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| |   ||||||||||||||||    
T  4308796 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaaccttcttgctgctctttcccttgcttcccacta 4308895  T
Q  105 ctccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatt 203  Q
    | ||||||||||||||||||||||||| |  |||| |||||||| |||||||||||||||||||||||||| | |||| ||||||||||| |||||| ||    
T  4308896 caccaagtagctccacaagtttacacctcataaccccttcagccctcagaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagtt 4308995  T
Q  204 tcaggta 210  Q
    | |||||    
T  4308996 ttaggta 4309002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 219
Target Start/End: Complemental strand, 43228054 - 43227839
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccacta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||| |   ||||||||||||||||    
T  43228054 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaaccaccttgctgctctttcccttgcttcccacta 43227955  T
Q  105 ctccaagtagctccacaagtttacaccctca--acctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaat 202  Q
    ||||||||| ||||||||||||||| |||||  ||| |||||||| || ||||||||||||||||||||||| | |||| ||||||||||| ||||||||    
T  43227954 ctccaagtatctccacaagtttaca-cctcatgaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggaat 43227856  T
Q  203 ttcaggtagttctacaa 219  Q
    || || |||||| ||||    
T  43227855 tttagttagttccacaa 43227839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 212
Target Start/End: Original strand, 35918464 - 35918672
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccacta 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| |   ||||||||||||||||    
T  35918464 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgccaatcatcaaccttcttgctgctctttcccttgcttcccacta 35918563  T
Q  105 ctccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatt 203  Q
    ||||||||||||||||||||||||||| || ||||  ||||||| || ||||||||||||||||||||||  | |||| ||||||||||| |||||| ||    
T  35918564 ctccaagtagctccacaagtttacacctcttaacccattcagccctcggaatgtcttccgccttctcgaaagtccttgcagtccaactacactaggagtt 35918663  T
Q  204 tcaggtagt 212  Q
    | |||||||    
T  35918664 ttaggtagt 35918672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 219
Target Start/End: Complemental strand, 3306518 - 3306327
Alignment:
Q  28 attctccaccttgacttcaaatcagtgatggtgccgatc-atcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagttt 126  Q
    |||||||||||| |||  |||| ||||||| |||| | | ||||||| ||||||||| |   ||||||||||||||||| || ||| |||||||||||||    
T  3306518 attctccaccttaactctaaattagtgatgatgccaaaccatcaaccaccttgctgctctttcccttgcttcccactacacctagttgctccacaagttt 3306419  T
Q  127 acaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3306418 acaccct-aacctcttcagtcatcggaatgtcttccgccttctcgaagatgcttgtagtccaactactctaggaatttcaggtagttctacaa 3306327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 219
Target Start/End: Original strand, 43421975 - 43422160
Alignment:
Q  32 tccaccttgacttcaaatcagtgatggtgccgatc-atcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtttacac 130  Q
    |||||||||||| ||||| ||||||| || | | | ||||||| ||||||||| |   |||||  |||||||||| |||||||| ||||||| |||||||    
T  43421975 tccaccttgactccaaattagtgatgatgtcaaaccatcaaccaccttgctgctctttccctta-ttcccactacaccaagtagttccacaaatttacac 43422073  T
Q  131 cctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
     || |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||    
T  43422074 tct-aacctcttcagccatcagaatgtcttccgccttctcgaagatccttgt-gtccaactacactaggaatttcaggtagttctacaa 43422160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 42991888 - 42991762
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc 187  Q
    ||||||||||||||||| ||||||||||||||||||||||||| || |||| |||||||| ||  |||||||||||||||||||||| | ||||||||||    
T  42991888 cccttgcttcccactacaccaagtagctccacaagtttacacctcttaaccccttcagccctcgaaatgtcttccgccttctcgaaggtccttgtagtcc 42991789  T
Q  188 aactacgctaggaatttcaggtagttc 214  Q
    |||||| |||||||||| |||||||||    
T  42991788 aactacactaggaattttaggtagttc 42991762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 90 - 219
Target Start/End: Original strand, 28100661 - 28100789
Alignment:
Q  90 ccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaa 189  Q
    |||||||||||||||| ||||||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||||||||||| | |||| ||||||     
T  28100661 ccttgcttcccactacaccaagtagctccacaagtttacacctt-aaccccttcagccatcggaatgtcttccgccttctcgaaggtccttgcagtccat 28100759  T
Q  190 ctacgctaggaatttcaggtagttctacaa 219  Q
    |||| ||| |||||| ||||||||| ||||    
T  28100760 ctacactatgaattttaggtagttccacaa 28100789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 219
Target Start/End: Original strand, 28137833 - 28138022
Alignment:
Q  30 tctccaccttgacttcaaatcagtgatggtgccgatc-atcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtttac 128  Q
    ||||||||||||||| |||| | ||||| |||| | | ||||||| || |||||| |   ||||||||||||||||| ||||||||||||||||||||||    
T  28137833 tctccaccttgactttaaattaatgatgatgccaaaccatcaaccaccatgctgctctttcccttgcttcccactacaccaagtagctccacaagtttac 28137932  T
Q  129 accctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||| | | || ||||||||||| ||||||||||| ||||||| ||| | |||| ||||||||||| |||| ||||| ||||||||| ||||    
T  28137933 accttaatcc-cttcagccatcggaatgtcttcctccttctcaaaggtccttgcagtccaactacactagaaattttaggtagttccacaa 28138022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 53916286 - 53916363
Alignment:
Q  142 tcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  53916286 tcagccatcggaatgtcttccgccttctcgaagatccttatagtccaactacgctaggaatttcaggtagttctacaa 53916363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 30 - 219
Target Start/End: Original strand, 890310 - 890498
Alignment:
Q  30 tctccaccttgacttcaaatcagtgatggtgccgatc-atcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtttac 128  Q
    ||||||||||||||  |||| ||||||| || | | | ||||||| ||||||||| |   ||||||||||||||||| ||||||||||||||||||||||    
T  890310 tctccaccttgactctaaattagtgatgatgtcaaaccatcaaccaccttgctgctctttcccttgcttcccactacaccaagtagctccacaagtttac 890409  T
Q  129 accctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcca-actacgctaggaatttcaggtagttctacaa 219  Q
    ||||| |||||||||| ||||| ||||| |||||||| | | |||||| |||| |||||| ||||| | |||||||| ||||||||| ||||    
T  890410 accct-aacctcttcaaccatcggaatgccttccgccct-ttgaagatccttg-agtccagactactcaaggaattttaggtagttccacaa 890498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 135 - 214
Target Start/End: Complemental strand, 23636525 - 23636446
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttc 214  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||    |||||||||||||||||||||||||||    
T  23636525 aacctcttcagccatcggaatgtcttccgccttctcgaagatccttgtatcgaaactacgctaggaatttcaggtagttc 23636446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 10094576 - 10094633
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10094576 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 10094633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 16461875 - 16461818
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16461875 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 16461818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 47878659 - 47878716
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47878659 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 47878716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 890510 - 890594
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||| ||||| ||||| ||||||| ||||| |||||| ||||||||||||||  |||||||||||||||||||    
T  890510 aacctcttcagccatcggaatgccttcccccttctcaaagattcttgtaatccaactacgctagttatttcaggtagttctacaa 890594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 10595519 - 10595571
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10595519 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 10595571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 10901420 - 10901368
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10901420 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 10901368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 54192919 - 54192867
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54192919 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatg 54192867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 890705 - 890784
Alignment:
Q  140 cttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    ||||||||||| ||||||||||||||||||||||||| |||| ||||  |||||||||||||||| ||||||||| ||||    
T  890705 cttcagccatcggaatgtcttccgccttctcgaagatccttgcagtcagactacgctaggaattttaggtagttccacaa 890784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 219
Target Start/End: Original strand, 53916450 - 53916552
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttct 215  Q
    ||||||||| |||||| | |||| |||||||| |||||||||||||||||||||||||| | |||| |||| |||||||||||| |||| |||||||||     
T  53916450 tccacaagtatacacctt-aaccccttcagccctcagaatgtcttccgccttctcgaaggtccttgcagtctaactacgctaggtattttaggtagttcc 53916548  T
Q  216 acaa 219  Q
    ||||    
T  53916549 acaa 53916552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 10201462 - 10201519
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  10201462 ctgattttaagttaaatctcacaattctccaccttgacttcaaatcagtgatgatgcc 10201519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 5899178 - 5899082
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| | | || |||||||| || |||| |||||||||||||||||| | |||| |||||||||||||||||||||| |||||||    
T  5899178 tccacaagtatacaccttaacccccttcagccctcggaatatcttccgccttctcgaaggtccttgcagtccaactacgctaggaattttaggtagt 5899082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 3316141 - 3316062
Alignment:
Q  140 cttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||| || ||||||||||||||||||||||| | |||| ||||||||||||||| |||||| ||||||||| ||||    
T  3316141 cttcagccctcggaatgtcttccgccttctcgaaggtccttgcagtccaactacgctaagaattttaggtagttccacaa 3316062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 219
Target Start/End: Original strand, 43422247 - 43422349
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttct 215  Q
    ||||||||| |||||| | |||| |||||||  |||||||||||||||||||||||||  | |||| |||||||||||||||| ||||| |||||||||     
T  43422247 tccacaagtatacacctt-aaccccttcagctctcagaatgtcttccgccttctcgaatgtccttgcagtccaactacgctagaaattttaggtagttcc 43422345  T
Q  216 acaa 219  Q
    ||||    
T  43422346 acaa 43422349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 6064287 - 6064383
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| |||||| |||| |||||||||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  6064287 tccacaagtatacacc-tcaaccccttcagtcatcggaatgtcttccgccttctcgaagagtccttgcagtccaactacactaggagttttaggtagt 6064383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 457670 - 457575
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||| | ||||||||||| |||| |||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  457670 tccacaagtatacacc-tcaaacacttcagccatcggaatatcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 457575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 1619271 - 1619400
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaag---atgcttgtagt 185  Q
    ||||||||||||||||| ||| |||||||||||||||| ||||||  ||||||||| ||||| ||||| ||||||||||||| |||   || |||| | |    
T  1619271 cccttgcttcccactacaccatgtagctccacaagttttcaccct--acctcttcaaccatcggaatg-cttccgccttctctaagaccatccttgca-t 1619366  T
Q  186 ccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||  |||||||||| ||||||||| ||||    
T  1619367 ccaactatactaggaattttaggtagttcgacaa 1619400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 10956843 - 10956938
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||| |||||| ||||||||||| |||| |||||||||||||||||| | |||| |||| |||||| |||||| ||| |||||||    
T  10956843 tccacaagtatacacc-tcaaccccttcagccatcggaatatcttccgccttctcgaaggtccttgcagtctaactacactaggagttttaggtagt 10956938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 11169865 - 11169770
Alignment:
Q  116 tccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    ||||||||| |||||  |||||| ||| ||||||| ||||||||||||||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  11169865 tccacaagtatacact-tcaacccctttagccatcggaatgtcttccgccttctcgaaggtccttgcagtccaactacactaggagttttaggtagt 11169770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 53916147 - 53916276
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcc- 187  Q
    ||||||||||||||||  |||||||||| |||||||||||||||| |||||||||| ||||| ||||| ||| |||| | | |||||| ||||| ||||     
T  53916147 cccttgcttcccactataccaagtagcttcacaagtttacaccct-aacctcttcaaccatcggaatgcctttcgcccttttgaagatccttgt-gtcca 53916244  T
Q  188 aactacgctaggaatttcaggtagttctacaa 219  Q
    |||||| | ||| |||| ||||||||| ||||    
T  53916245 aactactcaaggcatttaaggtagttccacaa 53916276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 2075642 - 2075716
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccg 163  Q
    ||||||||||  ||||| |||||||||||||||||||| ||||||   |||||||| || |||||||||||||||    
T  2075642 cccttgcttctaactacaccaagtagctccacaagtttccaccctttgcctcttcaaccttcagaatgtcttccg 2075716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 4309023 - 4309101
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||||||||||| ||| |||||||| ||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  4309023 aacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagt 4309101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 18097625 - 18097710
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||||||||||||||| ||| |||||||| ||||||||||| | |||| ||||||||||| |||||| ||| | ||||||| ||||    
T  18097625 aacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttatgtagttccacaa 18097710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 42991745 - 42991669
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggta 210  Q
    |||||||||||||||| ||| |||||||| ||||||||||| | |||| ||||||||||| |||||| ||| |||||    
T  42991745 aacctcttcagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggta 42991669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 23636663 - 23636545
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcca 188  Q
    ||||||||||||||||| |||||||| |||||||||||||||| |  ||||||||| ||||  |||   |||||||||| | |||||| ||||   |||     
T  23636663 cccttgcttcccactacaccaagtagatccacaagtttacacctt--acctcttcaaccattggaaaaccttccgcctt-ttgaagattcttg-cttccc 23636568  T
Q  189 actacgctaggaatttcaggtag 211  Q
    |||||||||||||||| ||||||    
T  23636567 actacgctaggaattttaggtag 23636545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 35918691 - 35918769
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||||| ||||||||| |||||||| ||||||||||| | |||| ||||||||||| |||| | ||| |||||||    
T  35918691 aacctcttcaaccatcagaacgtcttccgtcttctcgaagagtccttgcagtccaactacactagaagttttaggtagt 35918769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 43227827 - 43227749
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||| ||||||| ||| |||||||| ||||||||||| | |||| ||||||||||| |||||| ||| |||||||    
T  43227827 aacctctttagccatcggaacgtcttccgtcttctcgaagagtccttgcagtccaactacactaggagttttaggtagt 43227749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 14634783 - 14634862
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttct 169  Q
    |||||||||||  |||| ||||||||||| |||||||| |  || ||||||||||| ||||| ||||| ||||||||||||    
T  14634783 cccttgcttccacctacaccaagtagctctacaagttttccacc-caacctcttcaaccatcggaatgccttccgccttct 14634862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 28138034 - 28138093
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaag-atgcttgtagtccaactac 193  Q
    |||||||||||||||| ||| |||||||| |||||||||| || |||| |||||||||||    
T  28138034 aacctcttcagccatcggaacgtcttccgtcttctcgaagaatccttgcagtccaactac 28138093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 18099681 - 18099709
Alignment:
Q  1 aaacctgattttaagttaactctcacaat 29  Q
    |||||||||||||||||||||||||||||    
T  18099681 aaacctgattttaagttaactctcacaat 18099709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 22114816 - 22114844
Alignment:
Q  1 aaacctgattttaagttaactctcacaat 29  Q
    |||||||||||||||||||||||||||||    
T  22114816 aaacctgattttaagttaactctcacaat 22114844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 6 - 219
Target Start/End: Complemental strand, 2650 - 2448
Alignment:
Q  6 tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccactac 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||| |   |||||||||||||||||    
T  2650 tgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgattccaatcatcaacctccttgctgctctttcccttgcttcccactac 2551  T
Q  106 tccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaattt 204  Q
    |||||||||||||||||||||||||| || |||||||||||||||             |||||||| |||||||||||||||||||||||||||||||||    
T  2550 tccaagtagctccacaagtttacacctcttaacctcttcagccat------------agccttctcaaagatgcttgtagtccaactacgctaggaattt 2463  T
Q  205 caggtagttctacaa 219  Q
    || ||||||||||||    
T  2462 caagtagttctacaa 2448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 69811 - 70019
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccacta 104  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||| || | |||||||||| ||||||||  |   ||||||||||||||||    
T  69811 ctgattttaagttaactcttacaattctccactttgacttcaaatcagtgatgatgtcaatcatcaaccaccttgctgatctttcccttgcttcccacta 69910  T
Q  105 ctccaagtagctccacaagtttacacc-ctcaacctcttcagccatcagaatgtcttccgccttctcg-aagatgcttgtagtccaactacgctaggaat 202  Q
    | ||||||||||||||||||||||||| |  |||| |||||||| || |||||||||||||||||||| ||| | |||| ||||||||||| ||||||||    
T  69911 caccaagtagctccacaagtttacacctcataaccccttcagccctcggaatgtcttccgccttctcgaaaggtccttgcagtccaactacactaggaat 70010  T
Q  203 ttcaggtag 211  Q
    || ||||||    
T  70011 tttaggtag 70019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 70039 - 70117
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||||||||||| ||  |||||||| ||||||||||| | |||| |||||||||||||||||||||| |||||||    
T  70039 aacctcttcagccatcggagcgtcttccgtcttctcgaagagtacttgcagtccaactacgctaggaattttaggtagt 70117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 212
Target Start/End: Original strand, 95 - 280
Alignment:
Q  28 attctccaccttgacttcaaatcagtgatggtgccgatcatcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagttta 127  Q
    ||||||||||||||||  |||| ||||||| |||| |||||||||||||||  ||| |   ||||||||||||||||| |||||||||| ||||||||||    
T  95 attctccaccttgactctaaattagtgatgatgccaatcatcaacctccttaatgctctttcccttgcttcccactacaccaagtagcttcacaagttta 194  T
Q  128 caccctc-aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||   |||| |||||||| || ||||||||||||||||||||||| | |||||||||||||||| |||||| ||| |||||||    
T  195 caccccataaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgtagtccaactacactaggagttttaggtagt 280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 299 - 377
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaaga-tgcttgtagtccaactacgctaggaatttcaggtagt 212  Q
    |||||||||||||||| ||| |||||||| ||||||||||| | |||| |||||||||||||||||||||| |||||||    
T  299 aacctcttcagccatcggaacgtcttccgacttctcgaagagtccttgcagtccaactacgctaggaattttaggtagt 377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 1130 - 1073
Alignment:
Q  5 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatggtgcc 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1130 ctgattttaagttaactctcacaattctccaccttgacttcaaatcagtgatgatgcc 1073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 35380 - 35296
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| |||||||| || ||||||||||||||||||||||| | ||||||||| |||||||||||| |||| ||||||||| ||||    
T  35380 aaccccttcagccctcggaatgtcttccgccttctcgaaggtccttgtagtctaactacgctaggtattttaggtagttccacaa 35296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 182
Target Start/End: Complemental strand, 35579 - 35429
Alignment:
Q  30 tctccaccttgacttcaaatcagtgatggtgccgatc-atcaacctccttgctgcccaaacccttgcttcccactactccaagtagctccacaagtttac 128  Q
    |||||||||||||| ||||| ||||||| || | | | ||||||| ||||||||| |   |||||| |||| ||||| ||||||||||||||||||||||    
T  35579 tctccaccttgactccaaattagtgatgatgtcaaaccatcaaccaccttgctgctctttcccttg-ttcctactacaccaagtagctccacaagtttac 35481  T
Q  129 accctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgt 182  Q
    |||   |||||||||| |||||  |||| |||||||| | | |||||| |||||    
T  35480 acc--taacctcttcaaccatcgaaatgccttccgcccttttgaagatccttgt 35429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 51644 - 51569
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgcc 165  Q
    ||||||||||||||||| |||||||| | |||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  51644 cccttgcttcccactacaccaagtagtttcacaagtttacaccct-aacctcttcaaccatcggaatgtcttccgcc 51569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 51503 - 51419
Alignment:
Q  135 aacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttctacaa 219  Q
    |||| |||||| | || ||||||||||||||||||||||| | |||| |||||| |||| |||||||||| ||||||||| ||||    
T  51503 aaccccttcagacctcggaatgtcttccgccttctcgaaggtccttgcagtccatctacactaggaattttaggtagttccacaa 51419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 45; Significance: 8e-17; HSPs: 3)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 4271 - 4195
Alignment:
Q  138 ctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagttc 214  Q
    ||||||||||| | ||||||||||||||||||||||||  |||| ||||||||||| |||| ||||| |||||||||    
T  4271 ctcttcagccaacggaatgtcttccgccttctcgaagagccttgcagtccaactacactagaaattttaggtagttc 4195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 4365 - 4292
Alignment:
Q  140 cttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtccaactacgctaggaatttcaggtagtt 213  Q
    |||||||||||| ||||| ||||| |||||||||| | |||| ||||||||||| |||||||||| ||||||||    
T  4365 cttcagccatcataatgttttccgacttctcgaaggtccttgcagtccaactacactaggaatttgaggtagtt 4292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 195
Target Start/End: Complemental strand, 4489 - 4387
Alignment:
Q  89 cccttgcttcccactactccaagtagctccacaagtttacaccctcaacctcttcagccatcagaatgtcttccgccttctcgaagatgcttgtagtcca 188  Q
    ||||||||||||| ||| ||| |||||||||||| ||||||||   ||| |||| | ||||| ||||| |||||||||| | |||||| |||||| ||||    
T  4489 cccttgcttcccagtacaccatgtagctccacaa-tttacacc--taacttcttaaaccatcggaatgccttccgcctttttgaagattcttgta-tcca 4394  T
Q  189 actacgc 195  Q
    |||||||    
T  4393 actacgc 4387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University