View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453A_low_616 (Length: 224)
Name: NF11453A_low_616
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453A_low_616 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 38892956 - 38892738
Alignment:
| Q |
1 |
agttgccttctgtttctctcttcttgccttccctgcaaaaagtggacccaagaataagaattgattaaatgagtcatctttattttgaagtggttcaaat |
100 |
Q |
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| T |
38892956 |
agtttccttctgtttctctcttcttgccttccctgcaaaaagtggaaccaagaataagaattgattaaatgagtcatctttattttgaattggttcaaat |
38892857 |
T |
|
| Q |
101 |
gtgagcgtaattaatcaaactaaaatgttatcaaatgaaatcaaccaataataattacaccatgaattgtaccatcgcatcggaaattggccctctacaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
38892856 |
gtgagcgtaattaatcaaactaaaatgttatcaaatgaaatcaaccaataataattacaccatgaattgtaccatcgcatcggaaattgaccctctacaa |
38892757 |
T |
|
| Q |
201 |
cgaaaaataagaaagaaat |
219 |
Q |
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|||||||||| |||||||| |
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| T |
38892756 |
cgaaaaataaaaaagaaat |
38892738 |
T |
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