View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453A_low_617 (Length: 224)
Name: NF11453A_low_617
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453A_low_617 |
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Alignment Details
Target: chr8 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 16023366 - 16023583
Alignment:
| Q |
1 |
ttcttcgtcttccattgtgatcgttgtatttttgcagatctctaattcttcatcctccaatgtggttggatcatattcaatgacatcttcattcaccaaa |
100 |
Q |
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| T |
16023366 |
ttcttcgtcttccattgtgatcgttgtattttcgcagatctctaattcttcatcctccattgtggttggatcatatccaaaaacatcatcattcaccaaa |
16023465 |
T |
|
| Q |
101 |
aagtgatgatcaaaactttgactttgatgattcttctcttgagactcatgatctgcatatttatccatgttgatgaagctatcaacaaaatcatcgactt |
200 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||| |
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| T |
16023466 |
aagttatgatcaaaactttgactttgatgattcttctcttgagactcatgatctgaatattgatccatgttgatgaagctatcaacaaagtcatcgactt |
16023565 |
T |
|
| Q |
201 |
ccgaagaaggtaataaac |
218 |
Q |
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|||||||||||||||||| |
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| T |
16023566 |
ccgaagaaggtaataaac |
16023583 |
T |
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