View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453A_low_632 (Length: 222)
Name: NF11453A_low_632
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453A_low_632 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 36172849 - 36172627
Alignment:
| Q |
1 |
atgaatgctttatgaccgaagaagtctcattcattcacaaaagcatgcagggagagggaacgttagccacacataaattagttttctttttgacaggacc |
100 |
Q |
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| T |
36172849 |
atgaatgctttatgaccgaagaagtctcattcattcacaaaagcatgcagggagagggaaccttagccacacataaattagttttctttttgacaggacc |
36172750 |
T |
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| Q |
101 |
acacataattagctgaaggattgtacagagaaaatgtatgaatgaattgaacttaagtggacaaataaaaccgagtaaaaac-aacatcttttgcaaatg |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |
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| T |
36172749 |
acacataattagctgaaggattgtacagagaaaatgtatgaatgaattgaacttaagtggaccaataaaaccgagtaaaaacaaacatcttttgcaaatg |
36172650 |
T |
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| Q |
200 |
attacctattctaacttctaagc |
222 |
Q |
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||||||||||||||||||||||| |
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| T |
36172649 |
attacctattctaacttctaagc |
36172627 |
T |
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