View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453A_low_711 (Length: 201)
Name: NF11453A_low_711
Description: NF11453A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453A_low_711 |
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Alignment Details
Target: chr3 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 34 - 179
Target Start/End: Original strand, 48669242 - 48669387
Alignment:
| Q |
34 |
gtgttcggagacggttaccggattttcttcaatctgtgaaccttaagtatgtgaaattgggttaccattatctgataaaccatggtgtttatttgttcac |
133 |
Q |
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| T |
48669242 |
gtgttcggagacggttaccggattttcttcaatctgtgaaccttaagtatgtgaaattgggttaccattatctgataaaccatggtgtttatttgttcac |
48669341 |
T |
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| Q |
134 |
tataccaattctacttgttgtgtttagtgctgaggttggtagtctt |
179 |
Q |
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| T |
48669342 |
tataccaattctacttgttgtgtttagtgctgaggttggtagtctt |
48669387 |
T |
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