View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11453_high_38 (Length: 344)

Name: NF11453_high_38
Description: NF11453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11453_high_38
NF11453_high_38
[»] chr2 (17 HSPs)
chr2 (51-323)||(18727235-18727505)
chr2 (11-275)||(31846720-31846984)
chr2 (16-273)||(40829919-40830175)
chr2 (18-274)||(34342528-34342784)
chr2 (17-196)||(9731307-9731485)
chr2 (14-275)||(38295291-38295541)
chr2 (18-114)||(2308114-2308212)
chr2 (65-149)||(32294264-32294348)
chr2 (14-82)||(42242275-42242343)
chr2 (64-149)||(37810497-37810582)
chr2 (65-125)||(3858307-3858367)
chr2 (97-149)||(24026204-24026256)
chr2 (65-117)||(15926489-15926541)
chr2 (65-122)||(32294444-32294500)
chr2 (65-114)||(43617911-43617960)
chr2 (97-149)||(30850793-30850845)
chr2 (67-153)||(18899542-18899628)
[»] chr3 (14 HSPs)
chr3 (14-280)||(21386044-21386310)
chr3 (14-275)||(4962266-4962527)
chr3 (14-271)||(33693553-33693810)
chr3 (14-275)||(49458654-49458910)
chr3 (34-273)||(43173188-43173427)
chr3 (34-193)||(7437125-7437283)
chr3 (64-149)||(30238175-30238259)
chr3 (65-117)||(21718344-21718396)
chr3 (14-48)||(1666391-1666425)
chr3 (231-273)||(7667194-7667236)
chr3 (65-117)||(25050034-25050086)
chr3 (229-275)||(16155432-16155478)
chr3 (67-153)||(53836334-53836420)
chr3 (67-123)||(1666335-1666390)
[»] chr6 (11 HSPs)
chr6 (14-275)||(2607191-2607452)
chr6 (38-274)||(16438986-16439221)
chr6 (34-275)||(28900407-28900652)
chr6 (16-275)||(31534665-31534900)
chr6 (59-273)||(24194757-24194971)
chr6 (64-275)||(33640878-33641089)
chr6 (14-64)||(31975310-31975360)
chr6 (177-273)||(31975359-31975455)
chr6 (14-66)||(24195541-24195593)
chr6 (97-147)||(15381218-15381268)
chr6 (64-149)||(21010521-21010605)
[»] chr4 (19 HSPs)
chr4 (14-281)||(33139072-33139340)
chr4 (14-275)||(24966047-24966309)
chr4 (14-275)||(32890160-32890421)
chr4 (9-180)||(46862496-46862668)
chr4 (14-276)||(29509618-29509879)
chr4 (19-117)||(26490837-26490935)
chr4 (21-180)||(35518081-35518231)
chr4 (67-180)||(50517493-50517606)
chr4 (108-274)||(46286995-46287162)
chr4 (14-94)||(12754773-12754851)
chr4 (56-149)||(40317270-40317363)
chr4 (56-149)||(40327344-40327437)
chr4 (155-275)||(53574004-53574123)
chr4 (65-125)||(871954-872014)
chr4 (97-149)||(25842622-25842674)
chr4 (221-275)||(46862694-46862748)
chr4 (65-126)||(24454025-24454086)
chr4 (64-132)||(21306005-21306073)
chr4 (97-149)||(26955687-26955739)
[»] chr1 (18 HSPs)
chr1 (20-273)||(49236559-49236812)
chr1 (14-275)||(47371125-47371386)
chr1 (14-250)||(49452616-49452851)
chr1 (14-185)||(28403534-28403707)
chr1 (17-273)||(3593522-3593778)
chr1 (34-273)||(42303956-42304196)
chr1 (56-275)||(32759699-32759918)
chr1 (16-274)||(25253812-25254073)
chr1 (17-140)||(19863276-19863399)
chr1 (34-246)||(35176842-35177056)
chr1 (21-175)||(48966072-48966222)
chr1 (64-149)||(46042298-46042383)
chr1 (65-117)||(52182490-52182542)
chr1 (74-149)||(226321-226396)
chr1 (64-111)||(42637749-42637796)
chr1 (67-153)||(1242920-1243006)
chr1 (67-153)||(41353817-41353903)
chr1 (193-273)||(48966225-48966305)
[»] chr8 (27 HSPs)
chr8 (14-250)||(12737639-12737875)
chr8 (14-273)||(12521961-12522220)
chr8 (14-275)||(42423489-42423750)
chr8 (14-275)||(27878166-27878428)
chr8 (14-275)||(28018347-28018609)
chr8 (15-275)||(27915111-27915372)
chr8 (15-275)||(27961530-27961791)
chr8 (14-275)||(44977015-44977275)
chr8 (14-207)||(27974522-27974716)
chr8 (14-207)||(28031791-28031985)
chr8 (9-185)||(8029404-8029578)
chr8 (14-180)||(27869492-27869661)
chr8 (108-281)||(6387748-6387921)
chr8 (34-193)||(24082564-24082723)
chr8 (14-116)||(6387457-6387559)
chr8 (17-116)||(41394306-41394405)
chr8 (56-173)||(3007408-3007524)
chr8 (85-149)||(33177496-33177560)
chr8 (65-126)||(37131184-37131245)
chr8 (65-126)||(35879824-35879885)
chr8 (65-117)||(17234880-17234932)
chr8 (65-117)||(24067269-24067321)
chr8 (225-273)||(41394226-41394274)
chr8 (67-153)||(19484589-19484675)
chr8 (97-149)||(4870784-4870837)
chr8 (72-117)||(7760961-7761006)
chr8 (225-273)||(3007561-3007609)
[»] chr7 (16 HSPs)
chr7 (29-273)||(43172351-43172595)
chr7 (17-175)||(23017367-23017525)
chr7 (14-186)||(21486508-21486681)
chr7 (56-275)||(16709821-16710040)
chr7 (56-275)||(17684057-17684276)
chr7 (17-169)||(42610901-42611055)
chr7 (90-281)||(5771747-5771937)
chr7 (17-126)||(31445777-31445885)
chr7 (64-149)||(6268856-6268941)
chr7 (56-123)||(42043744-42043810)
chr7 (65-117)||(33496988-33497040)
chr7 (225-275)||(23017282-23017332)
chr7 (67-153)||(4639513-4639599)
chr7 (67-153)||(14741827-14741913)
chr7 (231-277)||(27149128-27149174)
chr7 (97-149)||(1254158-1254210)
[»] chr5 (8 HSPs)
chr5 (18-240)||(29716461-29716683)
chr5 (55-275)||(34218715-34218934)
chr5 (65-125)||(21490047-21490107)
chr5 (64-140)||(31913806-31913883)
chr5 (97-149)||(36196017-36196069)
chr5 (97-149)||(15286133-15286185)
chr5 (65-117)||(16497519-16497571)
chr5 (67-153)||(5650412-5650498)
[»] scaffold0573 (1 HSPs)
scaffold0573 (34-275)||(9142-9387)
[»] scaffold0013 (1 HSPs)
scaffold0013 (17-275)||(89567-89826)
[»] scaffold0118 (1 HSPs)
scaffold0118 (97-149)||(38242-38294)


Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 51 - 323
Target Start/End: Original strand, 18727235 - 18727505
Alignment:
Q  51 taagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaagg 150  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18727235 taagtcatctataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttcttcaaaagg 18727334  T
Q  151 tcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaaccctaactggtatgtgct 250  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||| |||||||||||    
T  18727335 tcgtcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcgaaatttaccccatcggaatcgcaaccctaattggtatgtgct 18727434  T
Q  251 atcttgttcatggtttgagaactcaaataaggaagtnnnnnnnnnncgtttcgtttcaggaagctagctatgc 323  Q
     ||||||||||||||| |||||||| ||||||||||          |||||||||||||||||||||||||||    
T  18727435 ctcttgttcatggtttaagaactcagataaggaagt--aaaaaaaacgtttcgtttcaggaagctagctatgc 18727505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 11 - 275
Target Start/End: Original strand, 31846720 - 31846984
Alignment:
Q  11 atgaacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaata 110  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||  ||||||| ||||||||||||||    
T  31846720 atgaacgcacaaaatcataagtttcataagtctctacgtttaagtcatccataaaaccatctaaaaaagcaagttttgcaagttcctaaagttgttaata 31846819  T
Q  111 aaactattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcaga 210  Q
    |||||||  ||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| ||| |||||| ||||||  || || | ||||  |    
T  31846820 aaactatctaaaaaataaactagttaatttcttcaaaaggtcaacaaacaccaccaccgcaaccctaacaagcgtcgcaatcactggcgttgaaatctaa 31846919  T
Q  211 atttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    |||| |  | ||| ||||||||||||||||||||||||||  | |||| ||||||||||||||||    
T  31846920 atttccatcgtcggaatcgcaaccctaactggtatgtgctcccctgtttatggtttgagaactca 31846984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 40830175 - 40829919
Alignment:
Q  16 cgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaact 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||     
T  40830175 cgcacaaaatcataagtttcataaatctctaagtttaagtcatccataaaatcatccaaaaaagcaagtttcacaagttcctatagttgttaataaaacc 40830076  T
Q  116 attcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaattta 215  Q
    ||  |||| || ||||||||||||| |||||||||||| ||||||| ||||| ||||||| |||| ||||| |||||||| | || | |||| ||||||     
T  40830075 atctaaaacataaactagttaatttcttcaaaaggtcaacaaacactaccactgcaaccctaacc-gcgtcgcaatcatcagcgtggaaatctgaatttc 40829977  T
Q  216 ccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaact 273  Q
    | || || |||||||||||||||||||||  ||||  | |||||||||||||||||||    
T  40829976 caccgtcaaaatcgcaaccctaactggtacatgctcccctgttcatggtttgagaact 40829919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 274
Target Start/End: Complemental strand, 34342784 - 34342528
Alignment:
Q  18 cacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactat 117  Q
    ||||||||||||| ||||||||||||||||||||||| |||| ||||||| |||||||| |||||| ||||||||||   ||||||||||||||||||||    
T  34342784 cacaaaatcataaatttcataagtctctaagtttaagccatctataaaactatccaaaatagcaagtttcacaagttttcaaagttgttaataaaactat 34342685  T
Q  118 tcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttacc 217  Q
      ||||||| ||||||||||||| || ||||||||| |||||||||||||| |||||| ||||  |||| |||| | | | |||| |||  |||||| |     
T  34342684 ctaaaaaataaactagttaatttcttgaaaaggtcaacaaacaccaccaccacaaccctaaccgacgtcgcaattaccagcgtcgaaatatgaatttcca 34342585  T
Q  218 ccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactc 274  Q
    || | | ||||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  34342584 ccgttggaatcgcaaccctaactggtatgtgctcccttattcatggtttgagaactc 34342528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 196
Target Start/End: Complemental strand, 9731485 - 9731307
Alignment:
Q  17 gcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaacta 116  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||| ||  ||||||||||||||||||||    
T  9731485 gcacaaaatcataagtttcgtaagtctttaagtttaagtcatccataaaaccatccaaaaaa-caagtttcacaaattactaaagttgttaataaaacta 9731387  T
Q  117 ttcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcg 196  Q
    |  ||||||| ||||| ||||||| |||||||||||| ||||||||||||||||||||| || | ||||| |||||||||    
T  9731386 tctaaaaaataaactaattaatttcttcaaaaggtcaacaaacaccaccaccgcaaccctaatcggcgtcgcaatcatcg 9731307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 38295291 - 38295541
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    |||||||||||||||||||||||||||||| ||||||||||            ||||||||||||| ||| ||||||| ||| |||||||| ||||||||    
T  38295291 aacgcacaaaatcataagtttcataagtctttaagtttaag------------ccatccaaaaaagaaagtttcacaaattcctaaagttgctaataaaa 38295378  T
Q  114 ctattcaaaaaatcaactagttaatttattc-aaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaat 212  Q
    ||||  ||||||| ||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||| |||||||||||| ||   ||| |||  ||||    
T  38295379 ctatctaaaaaataaactagttaatttcttcaaaaaggtcagcaaacaccaccaccgcaaccctaaccggcgtcacaatcaccgacatcgaaatatgaat 38295478  T
Q  213 ttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    || | |  ||| ||||||||||||||||||||||||||  | |||| ||||||||||||||||    
T  38295479 ttccacagtcggaatcgcaaccctaactggtatgtgctcccctgtttatggtttgagaactca 38295541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 2308114 - 2308212
Alignment:
Q  18 cacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatcca--aaaaagcaaggttcacaagttcgtaaagttgttaataaaac 114  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||  ||||| |||| ||||||||||| ||||||||||||||||||    
T  2308114 cacaaaatcataagtttcataagtctctaagtttaagccatccataaaaacatccaataaaaaacaagtttcacaagttcctaaagttgttaataaaac 2308212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 32294348 - 32294264
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  32294348 aaccatccaaaaaagcaagtttcacaagttcctaaagttgttaataaaactatccaaaaaataaactagttaatttcttcaaaag 32294264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 42242343 - 42242275
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaa 82  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42242343 aacgcacaaaatcataagtttcataagtctctaagtttaggtcatccataaaaccatccaaaaaagcaa 42242275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 37810497 - 37810582
Alignment:
Q  64 aaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    ||||||||| ||| || ||| |||||| |||  |||||||||||||||| |||| |||||||| ||||||||||||| ||||||||    
T  37810497 aaaccatccgaaagagtaagtttcacatgttgataaagttgttaataaacctatccaaaaaataaactagttaatttcttcaaaag 37810582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 3858307 - 3858367
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaa 125  Q
    ||||||||||||| ||||| ||||||||||| || |||||||||||||||||| |||||||    
T  3858307 aaccatccaaaaaggcaagtttcacaagttcctatagttgttaataaaactatccaaaaaa 3858367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 24026256 - 24026204
Alignment:
Q  97 taaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  24026256 taaagttgttaataaaactatccaaaaaataaactagttaatttcttcaaaag 24026204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 15926541 - 15926489
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactat 117  Q
    ||||||||||||| ||||| |||||| |||| |||||||||||||||||||||    
T  15926541 aaccatccaaaaaggcaagtttcacatgttcctaaagttgttaataaaactat 15926489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 32294444 - 32294500
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaa 122  Q
    ||||||| |||||| |||| ||||||||||| |||| |||||||||||||||||||||    
T  32294444 aaccatcaaaaaaatcaagtttcacaagttcctaaa-ttgttaataaaactattcaaa 32294500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 43617960 - 43617911
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaac 114  Q
    ||||||||||||| ||||| ||||||||||  ||||||||||||||||||    
T  43617960 aaccatccaaaaaggcaagtttcacaagtttctaaagttgttaataaaac 43617911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 30850845 - 30850793
Alignment:
Q  97 taaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    ||||||||||||||||||||| || ||||| | | ||||||||||||||||||    
T  30850845 taaagttgttaataaaactatccataaaataaccaagttaatttattcaaaag 30850793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 18899542 - 18899628
Alignment:
Q  67 ccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtca 153  Q
    |||||| |||||| ||| ||||||||||  |||| |||  ||||||||||| |||||||  |||||| |||||| ||| ||||||||    
T  18899542 ccatcccaaaaagaaagtttcacaagtttctaaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtca 18899628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 3e-82; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 14 - 280
Target Start/End: Original strand, 21386044 - 21386310
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  21386044 aacgcacaaaataataagtttcataagtctctaagtttaagtcatccataaaaccatccgaaaaagcaagtttcacaagttcgtaaagttgttaataaaa 21386143  T
Q  114 ctattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatt 213  Q
    || | |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||| | ||   | || ||  ||||||||| |||||    
T  21386144 ctgtccaaaaaataaactagttaatttcttcaaaaggtcatcaaacaccaccaccgcaaccctaaccaacatccttaacaccgacgtcgcaatcggaatt 21386243  T
Q  214 taccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactcaaataa 280  Q
    | |||| ||| ||||| |||||||||||||||||||| || |||| ||| ||| |||||||| ||||    
T  21386244 tcccccgtcggaatcgtaaccctaactggtatgtgctctcatgtttatgttttaagaactcagataa 21386310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 4962266 - 4962527
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  4962266 aacgcacaaaatcataagtttcacaagtctctaagtttaagccttccataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgtcaataaaa 4962365  T
Q  114 ctattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatt 213  Q
    ||||  ||||||| ||||||||||||| |||||||||| | ||||||||||||||||||||| ||||| |||| ||||||||| ||||| ||   |||||    
T  4962366 ctatctaaaaaataaactagttaatttcttcaaaaggttaacaaacaccaccaccgcaaccctaaccaacgtcgcaatcatcgatgtcgaaacatgaatt 4962465  T
Q  214 taccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    | | || ||  ||||||| ||||||||| ||||||||  | |||||||||||||||||||||    
T  4962466 tccaccgtctgaatcgcagccctaactgatatgtgctcccctgttcatggtttgagaactca 4962527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 14 - 271
Target Start/End: Complemental strand, 33693810 - 33693553
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  33693810 aacgcacaaaatcataagtttcataagtctctaagtttaagccatccataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgttaataaaa 33693711  T
Q  114 ctattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatt 213  Q
    ||||  ||||||| ||||| ||||||| |||||||||||| ||||||||||||| ||||||  |  | ||||| ||||||  ||  | | |||| |||||    
T  33693710 ctatctaaaaaataaactacttaatttcttcaaaaggtcaacaaacaccaccactgcaaccgtagtcggcgtcgcaatcacaggcattgaaatctgaatt 33693611  T
Q  214 taccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaa 271  Q
    | |||| |||||||  ||||| |||||||||||||||  | |||||||||||||||||    
T  33693610 ttccccgtcgaaattacaaccataactggtatgtgcttccctgttcatggtttgagaa 33693553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 49458910 - 49458654
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  49458910 aacgcacaaaatcataaatttcataagtctctaagtttaagtcatccataaaaccatccaaaaaatcaagtttcacaagttcctaaagttgttaataaaa 49458811  T
Q  114 ctattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatt 213  Q
    ||||  ||||||| ||||||||||||| |||||||||||| ||||||| |||||| |||||| |||| ||| | |||||| ||  ||||  ||  |||||    
T  49458810 ctatctaaaaaataaactagttaatttcttcaaaaggtcaacaaacactaccaccacaaccctaaccggcgacgcaatcaccgacgtcgatatatgaatt 49458711  T
Q  214 taccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    | | || |||     ||||||||||||||||||||||  | | |||||||||||||||||||    
T  49458710 tccaccgtcg-----gcaaccctaactggtatgtgcttccattttcatggtttgagaactca 49458654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 34 - 273
Target Start/End: Complemental strand, 43173427 - 43173188
Alignment:
Q  34 tcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactag 133  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||  ||||||| || |||    
T  43173427 tcataagtttctaagtttaagtcatccataaaaccatccaaaaaagcaagtttcaccagttcctaaagttgttaataaaactatctaaaaaataaattag 43173328  T
Q  134 ttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaac 233  Q
    ||||||| |||||||||||| |||||||| || ||||||||| |||| || || |||||| | | |||| |||  || |||    | ||| |||||||||    
T  43173327 ttaatttcttcaaaaggtcaacaaacaccgccgccgcaaccctaaccggcatcgcaatcaccagcgtcgaaatatgagtttctatcgtcggaatcgcaac 43173228  T
Q  234 cctaactggtatgtgctatcttgttcatggtttgagaact 273  Q
     ||||||||||||||||  | | |||||||||||| ||||    
T  43173227 tctaactggtatgtgctcccctattcatggtttgaaaact 43173188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 34 - 193
Target Start/End: Original strand, 7437125 - 7437283
Alignment:
Q  34 tcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactag 133  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||  ||||||| ||||||    
T  7437125 tcataagtctttaagtttaagccatccataaaaccatccaaaaaa-caagtttaacaagttcctaaagttgttaataaaactatctaaaaaataaactag 7437223  T
Q  134 ttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatca 193  Q
    ||||||  ||||||| || | ||||||||||||||||||| | |||||||||| ||||||    
T  7437224 ttaattacttcaaaaagtaaacaaacaccaccaccgcaactctaaccagcgtcgcaatca 7437283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 30238175 - 30238259
Alignment:
Q  64 aaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    ||||||||||||||  |||| |||||| |||   ||||||||||||||| |||| |||||||| ||||||||||||| ||||||||    
T  30238175 aaaccatccaaaaatacaagtttcacaggtttcaaaagttgttaataaacctatccaaaaaataaactagttaattt-ttcaaaag 30238259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 21718344 - 21718396
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactat 117  Q
    ||||||||||||| ||||| ||||||||||| |||| ||||||||||||||||    
T  21718344 aaccatccaaaaaggcaagtttcacaagttcttaaaattgttaataaaactat 21718396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 1666425 - 1666391
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaag 48  Q
    |||||||||||||||||||||||||||||||||||    
T  1666425 aacgcacaaaatcataagtttcataagtctctaag 1666391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 7667236 - 7667194
Alignment:
Q  231 aaccctaactggtatgtgctatcttgttcatggtttgagaact 273  Q
    |||||||||||||||||||| || |||||||||||||||||||    
T  7667236 aaccctaactggtatgtgctctcctgttcatggtttgagaact 7667194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 25050086 - 25050034
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactat 117  Q
    ||||||||||||| ||||| |||||||||||  |||| |||||||||||||||    
T  25050086 aaccatccaaaaatgcaagtttcacaagttcccaaaggtgttaataaaactat 25050034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 16155478 - 16155432
Alignment:
Q  229 gcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    ||||||||||||||||||||||  | |||| ||||||||||||||||    
T  16155478 gcaaccctaactggtatgtgctcccctgttgatggtttgagaactca 16155432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 53836420 - 53836334
Alignment:
Q  67 ccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtca 153  Q
    |||||| |||||| ||| ||||||||||  |||| |||  ||||||||||| |||||||  |||||| |||||| ||| ||||||||    
T  53836420 ccatcccaaaaaggaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtca 53836334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 1666390 - 1666335
Alignment:
Q  67 ccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaa 123  Q
    ||||||| ||||||||| || ||||||   |||||||||||||||||||||||||||    
T  1666390 ccatccacaaaagcaagttt-acaagtgtctaaagttgttaataaaactattcaaaa 1666335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 2e-74; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 2607452 - 2607191
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||  |||||||||||| ||||    
T  2607452 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaatcatccaaaaaagcaagttttacaagtttctaaagttgttaaaaaaa 2607353  T
Q  114 ctattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatt 213  Q
    ||||  ||||||  ||||||||||||| |||||||||||| ||||||| |||||| |||||| |||| ||||| |||||| || ||||| |||  |||||    
T  2607352 ctatctaaaaaagaaactagttaattttttcaaaaggtcaacaaacactaccaccacaaccctaaccggcgtcgcaatcaccgatgtcgaaatatgaatt 2607253  T
Q  214 taccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    | | || ||| ||||||||  |||||||||||||||| || |||||||||||||||||||||    
T  2607252 tccaccgtcggaatcgcaatgctaactggtatgtgctctcatgttcatggtttgagaactca 2607191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 38 - 274
Target Start/End: Complemental strand, 16439221 - 16438986
Alignment:
Q  38 aagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaa 137  Q
    |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||  ||||||| ||||||||||    
T  16439221 aagtctctaagtttcagacatccataaaaccatccaaaaaagcaagtttcacaagtttctaaagttgttaataaaactatctaaaaaataaactagttaa 16439122  T
Q  138 tttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaacccta 237  Q
    ||| |||||||||||| ||||||||||||| ||||||| ||||| |||| |||||| ||| |||| ||||  ||||| | |  || | ||||||||||||    
T  16439121 tttcttcaaaaggtcaacaaacaccaccactgcaaccctaaccaacgtcgcaatcaccggcgtcgaaatctaaatttccactgtc-agatcgcaacccta 16439023  T
Q  238 actggtatgtgctatcttgttcatggtttgagaactc 274  Q
    |||||||||||||  | ||||||||||||||||||||    
T  16439022 actggtatgtgctcccatgttcatggtttgagaactc 16438986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 34 - 275
Target Start/End: Original strand, 28900407 - 28900652
Alignment:
Q  34 tcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactag 133  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||  ||||||| ||||||    
T  28900407 tcataagtctctaagtttaagtcattcataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgttaataaaactatctaaaaaataaactag 28900506  T
Q  134 ttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaac 233  Q
    ||||||| ||||||||| || ||||||| |||||  |||||| |||| | ||| |||| | ||| || | |||  |||||| | || |||||||| ||||    
T  28900507 ttaatttcttcaaaaggacaacaaacactaccacaacaaccctaaccggtgtcgcaataaacggcgttgaaatatgaatttccaccgtcgaaatcacaac 28900606  T
Q  234 cctaactggtat----gtgctatcttgttcatggtttgagaactca 275  Q
    ||||||||||||    |||||  | |||||||||||||||||||||    
T  28900607 cctaactggtatatatgtgctcccctgttcatggtttgagaactca 28900652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 16 - 275
Target Start/End: Original strand, 31534665 - 31534900
Alignment:
Q  16 cgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaact 115  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||| |||         |||||||||||||||||||    
T  31534665 cgcacaaaatcataagtttcatatgtctctaagtttaagtcattcgtaaaaccatccaaaaaagcaagtttc---------taaagttgttaataaaact 31534755  T
Q  116 attcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaattta 215  Q
    ||  || |||| ||||| ||||||| |||||||| ||| |||||||||  ||||||||||               | ||||| |||| |||| ||||||     
T  31534756 atctaagaaataaactacttaatttcttcaaaagatcaacaaacaccatgaccgcaaccc---------------taatcggcgtcgaaatctgaatttc 31534840  T
Q  216 ccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    | || ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  31534841 caccgtcgaaatcgcaaccctaactgatatgtgctctcttgttcatggtttgagaactca 31534900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 59 - 273
Target Start/End: Complemental strand, 24194971 - 24194757
Alignment:
Q  59 ccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtcatcaaa 158  Q
    ||||||||||||||||||||| ||| ||||||| ||| ||||||||||| |||||||||  ||||||| ||||||||||||| |||||||||||| ||||    
T  24194971 ccataaaaccatccaaaaaagaaagtttcacaaattcctaaagttgttattaaaactatctaaaaaataaactagttaatttcttcaaaaggtcagcaaa 24194872  T
Q  159 caccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgtt 258  Q
    | |||||||||||| || |||||| ||   ||||| ||  |||  |||  |||||| | || ||| | ||||||||||||||||||| ||||  | ||||    
T  24194871 ctccaccaccgcaatcctaaccagtgttgtaatcaccgacgtcaaaatatgaatttccaccgtcggagtcgcaaccctaactggtatatgctcccatgtt 24194772  T
Q  259 catggtttgagaact 273  Q
    |||||||||||||||    
T  24194771 catggtttgagaact 24194757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 64 - 275
Target Start/End: Original strand, 33640878 - 33641089
Alignment:
Q  64 aaaccatccaaaaaa-gcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacacc 162  Q
    ||||||||||||||| | ||| ||||||| ||| |||||||||||||||||||||  ||||||| ||||||||||||| |||||||||||| | ||||||    
T  33640878 aaaccatccaaaaaaaggaagtttcacaatttcctaaagttgttaataaaactatctaaaaaataaactagttaatttcttcaaaaggtcaactaacacc 33640977  T
Q  163 accaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatg 262  Q
    ||||||||||||| |||  ||||| |||||| ||  |||| |||| |||||| | || | | ||| |||||| |||||||||||||||  | ||||||||    
T  33640978 accaccgcaaccctaacttgcgtcgcaatcaccgacgtcgaaatctgaatttccaccgttggaat-gcaaccataactggtatgtgctcccatgttcatg 33641076  T
Q  263 gtttgagaactca 275  Q
    |||||| ||||||    
T  33641077 gtttgaaaactca 33641089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 31975310 - 31975360
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataa 64  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31975310 aacgcacaaaatcataagtttcataagtctctaagtctaagtcatccataa 31975360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 273
Target Start/End: Original strand, 31975359 - 31975455
Alignment:
Q  177 aaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaact 273  Q
    ||||||||||  ||||| |||||||  |||  |||||| | || ||| ||||||||||||||||||||||||||  | |||||||||||||||||||    
T  31975359 aaccagcgtcgtaatcaccggtgtcaaaatatgaatttccaccttcggaatcgcaaccctaactggtatgtgctcccctgttcatggtttgagaact 31975455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 24195593 - 24195541
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaa 66  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||| ||||||    
T  24195593 aacgcacaaaatcataagtttcataaatctctaggtttaagccatcaataaaa 24195541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 15381218 - 15381268
Alignment:
Q  97 taaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaa 147  Q
    |||| |||||||||||||||| |||||||| ||| ||||||||| ||||||    
T  15381218 taaaattgttaataaaactatccaaaaaataaacaagttaatttcttcaaa 15381268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 21010521 - 21010605
Alignment:
Q  64 aaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    |||||||||||||||  ||| ||||||||||  ||||||||||||| || ||||  |||  || ||||||||||||| ||||||||    
T  21010521 aaaccatccaaaaaat-aagtttcacaagtttctaaagttgttaattaacctatcaaaattataaactagttaatttcttcaaaag 21010605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 141; Significance: 7e-74; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 14 - 281
Target Start/End: Complemental strand, 33139340 - 33139072
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  33139340 aacgcacaaaatcataagtttcataagtctctaagtttaatccatgcataaaaccatccaaaatagcaagtttcacaagttcctaaagttgttaataaaa 33139241  T
Q  114 ctat-tcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaat 212  Q
    |||| | ||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||  |||||||||| |||| |||| ||||    
T  33139240 ctatctaaaaaaataaactagttaatttcttcaaaaggtcaacaaacaccaccaccgcaaccctaaccggcgttgcaatcatcggagtcgaaatctgaat 33139141  T
Q  213 ttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactcaaataag 281  Q
    || | || ||| |||| ||||||||| |||||| ||||  | ||||| | ||||||||||||| |||||    
T  33139140 ttccaccgtcggaatcacaaccctaattggtatctgctcccatgttcttagtttgagaactcatataag 33139072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 24966047 - 24966309
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctct-aagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaa 112  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||    
T  24966047 aacgcacaaaatcataagtttcataagtctcttaagtttaaatcatccataaaaccatccaaaaaaacaagtttcacaagttcctaaagttgttaataaa 24966146  T
Q  113 actattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaat 212  Q
    |||||  ||||||  ||||||||||||| |||||||||||| ||||||||||||||||||||| |||| || |  |||||  ||| |||| ||||  | |    
T  24966147 actatctaaaaaacaaactagttaatttcttcaaaaggtcaacaaacaccaccaccgcaaccctaaccggcattgcaatctccggcgtcgaaatctaagt 24966246  T
Q  213 ttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    || | || |||||||||||||||||| |||||||| ||  | ||||| |||||||||||||||    
T  24966247 ttccaccgtcgaaatcgcaaccctaattggtatgtactcccatgttcgtggtttgagaactca 24966309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 32890421 - 32890160
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaa--gcaaggttcacaagttcgtaaagttgttaataa 111  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  | ||| |||| || ||| |||||||||||||||    
T  32890421 aacgcccaaaatcataagtttcataagtctctaagtttaagtcatccataaa-ccatccaaaaaaaaggaagtttcaaaatttcctaaagttgttaataa 32890323  T
Q  112 aactattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaa 211  Q
    ||||||  ||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| |||| ||||| |||||| ||  |||| |||  |||    
T  32890322 aactatctaaaaaataaactagttaatttcttcaaaaggtcaacaaacaccaccaccgcaaccctaaccggcgtcgcaatcaccgacgtcgaaatatgaa 32890223  T
Q  212 tttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    ||| | || | | ||| |||||| |||||||||||||||  | |||||||||||||| ||||||    
T  32890222 tttccaccgttggaat-gcaaccataactggtatgtgctcccatgttcatggtttgaaaactca 32890160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 46862496 - 46862668
Alignment:
Q  9 agatgaacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaa 108  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  46862496 agattaacacacaaaatcataagtttcataagtctctaagtttaagtcatccataaaatcatccaaaaaagcaagtttcacaagttcttaaagttgttaa 46862595  T
Q  109 taaaactattcaaaaaatcaactagttaatttattc-aaaaggtcatcaaacaccaccaccgcaaccccaacc 180  Q
    |||||||||  ||||||| ||||||||||||| ||| ||||||||| ||||||| ||||||||||||| ||||    
T  46862596 taaaactatctaaaaaataaactagttaatttcttcaaaaaggtcaacaaacactaccaccgcaaccctaacc 46862668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 14 - 276
Target Start/End: Original strand, 29509618 - 29509879
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaa-gcaaggttcacaagttcgtaaagttgttaataaa 112  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| | ||| ||||||| ||| | ||||||||||||||    
T  29509618 aacgcccaaaatcataagtttcatgagtctctaagtttaagtcatccataaa-ccatccaaaaaaaggaagtttcacaatttccttaagttgttaataaa 29509716  T
Q  113 actattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaat 212  Q
    |||||  ||||||| ||| ||||||||| |||||||||||| ||||||||||||||||||||| |||  ||||| |||||| ||| || | | || ||||    
T  29509717 actatctaaaaaataaaccagttaatttcttcaaaaggtcaacaaacaccaccaccgcaaccctaactggcgtcgcaatcaccggcgttgaactctgaat 29509816  T
Q  213 ttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactcaa 276  Q
    || | || | | ||| |||||| ||||||||| |||||  | |||||||||||||| |||||||    
T  29509817 ttccaccgttggaat-gcaaccataactggtacgtgctcccatgttcatggtttgaaaactcaa 29509879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 26490837 - 26490935
Alignment:
Q  19 acaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  26490837 acaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgttaataaaactat 26490935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 35518081 - 35518231
Alignment:
Q  21 aaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattca 120  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| |||  |||         ||||||||||||||||||||||||    
T  35518081 aaaatcataagtttcataagtctctaaatttaagtcatctgtaaaaccatccaaaaaaacaaatttc---------taaagttgttaataaaactattca 35518171  T
Q  121 aaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaacc 180  Q
    | |||| ||||||||||||| |||||||||||| |||| |||||||||||||||| ||||    
T  35518172 ataaataaactagttaatttcttcaaaaggtcaacaaataccaccaccgcaaccctaacc 35518231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 50517606 - 50517493
Alignment:
Q  67 ccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccacca 166  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||| | ||  ||||||| ||||||||||||| |||||||||||| ||||||||||||    
T  50517606 ccatccaaaaaagcaaatttcacaagttcctaaagttgttaataaatccatctaaaaaataaactagttaatttcttcaaaaggtcaacaaacaccacca 50517507  T
Q  167 ccgcaaccccaacc 180  Q
    ||||||||| ||||    
T  50517506 ccgcaaccctaacc 50517493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 108 - 274
Target Start/End: Complemental strand, 46287162 - 46286995
Alignment:
Q  108 ataaaactat-tcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaat 206  Q
    |||||||||| | ||||||| ||||||||||||| |||||||||||| |||||| |||||||||||||| ||||  |||| ||||||  || |||| |||    
T  46287162 ataaaactatctaaaaaaataaactagttaatttcttcaaaaggtcaacaaacatcaccaccgcaaccctaaccgacgtcgcaatcacgggagtcgaaat 46287063  T
Q  207 cagaatttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactc 274  Q
      |||||| |  | | | ||||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  46287062 ttgaatttccatcgttggaatcgcaaccctaactggtatgtgctcccttattcatggtttgagaactc 46286995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 12754851 - 12754773
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagtt 94  Q
    ||||||||||||||||||||||||||||||  ||||||||  |||||||||||||||||||| ||||||| ||||||||||    
T  12754851 aacgcacaaaatcataagtttcataagtct--aagtttaatccatccataaaaccatccaaacaagcaagtttcacaagtt 12754773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 149
Target Start/End: Original strand, 40317270 - 40317363
Alignment:
Q  56 catccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    |||||| | |||||||| ||||| |||| |||| |||||  ||||||| |||||||| ||||||||||||| ||||||||||||| ||||||||    
T  40317270 catccaaagaaccatccgaaaaaccaagtttcagaagtttctaaagttattaataaatctattcaaaaaatgaactagttaatttcttcaaaag 40317363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 149
Target Start/End: Original strand, 40327344 - 40327437
Alignment:
Q  56 catccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    |||||| | |||||||| ||||| |||| |||| |||||  ||||||| |||||||| ||||||||||||| ||||||||||||| ||||||||    
T  40327344 catccaaagaaccatccgaaaaaccaagtttcagaagtttctaaagttattaataaatctattcaaaaaatgaactagttaatttcttcaaaag 40327437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 275
Target Start/End: Original strand, 53574004 - 53574123
Alignment:
Q  155 caaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaaccctaactggtatgtgctatct 254  Q
    ||||||||||||||||||||  |||| ||||  |||||| |  ||||| |||| |||||| | || ||| ||||  ||||||||||||||| ||||| |     
T  53574004 caaacaccaccaccgcaacct-aaccggcgtagcaatcaacaatgtcgaaatcggaatttccaccgtcggaatcagaaccctaactggtatatgctaccc 53574102  T
Q  255 tgttcatggtttgagaactca 275  Q
    |||||||||||||||||||||    
T  53574103 tgttcatggtttgagaactca 53574123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 872014 - 871954
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaa 125  Q
    ||||||||||||| ||||  ||||||||||| |||| |||||||||||||||| |||||||    
T  872014 aaccatccaaaaaggcaaatttcacaagttcctaaatttgttaataaaactatccaaaaaa 871954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 25842622 - 25842674
Alignment:
Q  97 taaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    |||||||||||||||| |||| |||||||| ||||||||||||| ||||||||    
T  25842622 taaagttgttaataaagctatccaaaaaataaactagttaatttcttcaaaag 25842674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 46862694 - 46862748
Alignment:
Q  221 tcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    ||| |||||||||||||||| |||||||||  | |||||||||||||||||||||    
T  46862694 tcggaatcgcaaccctaactagtatgtgctcccctgttcatggtttgagaactca 46862748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 24454086 - 24454025
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaat 126  Q
    ||||||||||||| ||||| |||||| |||| ||| |||||||||||||||||  |||||||    
T  24454086 aaccatccaaaaaggcaagtttcacacgttcctaacgttgttaataaaactatataaaaaat 24454025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 21306005 - 21306073
Alignment:
Q  64 aaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaacta 132  Q
    |||||||||||||||||||| | ||||||||  |||| || |||||||||| || |||||||| |||||    
T  21306005 aaaccatccaaaaaagcaagatacacaagtttttaaatttattaataaaaccatccaaaaaataaacta 21306073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 26955739 - 26955687
Alignment:
Q  97 taaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    ||||||| ||||||||||||| |||||||| ||| | ||||||| ||||||||    
T  26955739 taaagtttttaataaaactatccaaaaaataaacaatttaatttcttcaaaag 26955687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 4e-72; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 20 - 273
Target Start/End: Original strand, 49236559 - 49236812
Alignment:
Q  20 caaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattc 119  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| |||| |||||| |||||||||||||||||||||      
T  49236559 caaaatcataagtttcataagtccctaagtttaagccatccataaaaccatccaaaaaagaaagtttcataagttcctaaagttgttaataaaactatct 49236658  T
Q  120 aaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttacccc 219  Q
    ||||||| ||||||||||||| || ||||||||| |||| |||||||| ||||||  |||||||||  |||||||||  |||| |||| |||||| | ||    
T  49236659 aaaaaataaactagttaatttctttaaaaggtcaacaaataccaccacagcaaccataaccagcgttgcaatcatcgacgtcgaaatctgaattttcacc 49236758  T
Q  220 atcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaact 273  Q
     |||||||||||||||||| |||||||||||  | |||||||||||||||||||    
T  49236759 gtcgaaatcgcaaccctaattggtatgtgctcccatgttcatggtttgagaact 49236812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 47371125 - 47371386
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  47371125 aacgcacaaaattataagtttcataagtctataagtttaagtcatccataaaaccatccaaaaaagcaagtttcacaagttcttaaagttgttaataaaa 47371224  T
Q  114 ctattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatt 213  Q
    | ||  ||||||  ||||||||||||| |||||||||||| | ||||||||| || |||||| |||| || |  |||||| ||| |||| ||||  | ||    
T  47371225 caatctaaaaaacaaactagttaatttcttcaaaaggtcaacgaacaccaccgccacaaccctaaccggcattgcaatcaccggcgtcgaaatctaagtt 47371324  T
Q  214 taccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    | | || ||||||| |||||||||| |||||||||||  | ||||| |||||||||||||||    
T  47371325 tccaccgtcgaaattgcaaccctaattggtatgtgctcccatgttcgtggtttgagaactca 47371386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 49452616 - 49452851
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||| ||||||||||||    
T  49452616 aacgcaccaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaa-caagtttcacaagttcctaaatttgttaataaaa 49452714  T
Q  114 ctattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatt 213  Q
    ||||  ||||||| ||||||||||||| ||||||| | || ||||||| ||||||||||||| |||| ||||| |||| | ||| |||| |||  || ||    
T  49452715 ctatctaaaaaataaactagttaatttcttcaaaacgacaacaaacactaccaccgcaaccctaaccggcgtcgcaataaacggcgtcgaaatatgactt 49452814  T
Q  214 taccccatcgaaatcgcaaccctaactggtatgtgct 250  Q
    | | || | | ||||||||||||||||||||| ||||    
T  49452815 tccaccgttggaatcgcaaccctaactggtatatgct 49452851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 28403534 - 28403707
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaag--caaggttcacaagttcgtaaagttgttaataa 111  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||||| |||||||||||||||    
T  28403534 aacgcacaaaatcataattttcataagtctctaagtttaagtcatccataaaaccatccaaaaaaaatcaagtttcacaagttcctaaagttgttaataa 28403633  T
Q  112 aactattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgt 185  Q
    ||||||| ||||||| ||||||||||||| |||||||||||| |||||||||| ||||||| || |||| ||||    
T  28403634 aactatttaaaaaataaactagttaatttcttcaaaaggtcaacaaacaccactaccgcaatcctaaccggcgt 28403707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 17 - 273
Target Start/End: Complemental strand, 3593778 - 3593522
Alignment:
Q  17 gcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaacta 116  Q
    ||||| ||||||||||||| |||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  3593778 gcacacaatcataagtttcttaagtctctaagtttaagtcgttcataaaaccatccaaaaaagtaagtttcacaagtccgtaaagttgttaataaaacta 3593679  T
Q  117 ttcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttac 216  Q
    |  ||||||| |||| |||||||| |||||||||| | ||||||||| ||||||||||| |||| | ||| ||||||| || |||| |||| |||||| |    
T  3593678 tctaaaaaataaacttgttaatttcttcaaaaggtaaacaaacaccaacaccgcaaccctaaccggtgtcgcaatcattggcgtcgaaatctgaatttcc 3593579  T
Q  217 cccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaact 273  Q
     |  ||  |||| |||| ||||||| ||||||||  | | ||||||| |||||||||    
T  3593578 actgtcagaatcacaacactaactgatatgtgctcccctattcatggattgagaact 3593522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 34 - 273
Target Start/End: Original strand, 42303956 - 42304196
Alignment:
Q  34 tcataagtctctaagtttaagtcatccataaaaccatccaaaaaa-gcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaacta 132  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | ||| ||||||||||| ||||||| |||||||||||||  ||||||| || ||    
T  42303956 tcataagtctctaagtttaagccatccataaaaccatccaaaaaaagaaagtttcacaagttcctaaagttattaataaaactatctaaaaaataaagta 42304055  T
Q  133 gttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaa 232  Q
    |||||||| ||||||| |||| |||||||||||||  |||||| |||||| |||||||||| ||| || | |||  |||||| | || ||  |||| |||    
T  42304056 gttaatttcttcaaaacgtcaacaaacaccaccacaacaaccctaaccagtgtcacaatcaccggcgttgaaatatgaatttccaccgtctgaatcacaa 42304155  T
Q  233 ccctaactggtatgtgctatcttgttcatggtttgagaact 273  Q
    |||||| |||||||||||  | |||||||||||||||||||    
T  42304156 ccctaaatggtatgtgctcccctgttcatggtttgagaact 42304196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 56 - 275
Target Start/End: Original strand, 32759699 - 32759918
Alignment:
Q  56 catccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtcatc 155  Q
    ||||||||||||||||||||||| |||| || ||||||||  ||| ||||||||||||||||  ||||||| ||||||||||||| |||||| ||||| |    
T  32759699 catccataaaaccatccaaaaaaccaagttttacaagttcaaaaaattgttaataaaactatctaaaaaataaactagttaatttcttcaaatggtcaac 32759798  T
Q  156 aaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaaccctaactggtatgtgctatctt 255  Q
    |||||||||| ||||||||| ||||   ||| |||||| ||| |||| |||| |||||| | || ||| ||||||||||||||||| ||||||||  |||    
T  32759799 aaacaccacccccgcaaccctaaccgatgtcgcaatcaccggcgtcgaaatctgaattttcaccgtcggaatcgcaaccctaactgatatgtgctccctt 32759898  T
Q  256 gttcatggtttgagaactca 275  Q
    ||||||||||||||||||||    
T  32759899 gttcatggtttgagaactca 32759918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 16 - 274
Target Start/End: Complemental strand, 25254073 - 25253812
Alignment:
Q  16 cgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaact 115  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| | |||| ||| ||||||   ||||||||||||||||||    
T  25254073 cgcacaaaatcataagtttcataagtctctaagttcaagtcattcataaaaccatcaaaaataacaagtttctcaagtttccaaagttgttaataaaact 25253974  T
Q  116 attcaaaa---aatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaat 212  Q
    ||  ||||   ||| ||||||||||||| |||||||||||| ||||||||||||||||||||| |     |||| |||||| ||| |||| |||  ||||    
T  25253973 atctaaaaaataataaactagttaatttcttcaaaaggtcaacaaacaccaccaccgcaaccctatttgacgtcgcaatcaccggcgtcgaaatatgaat 25253874  T
Q  213 ttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactc 274  Q
    || | || | | | ||||||||||||| ||||||| ||  ||| |||| |||||||||||||    
T  25253873 ttccaccgttggattcgcaaccctaaccggtatgtactcccttattcaaggtttgagaactc 25253812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 19863399 - 19863276
Alignment:
Q  17 gcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaacta 116  Q
    |||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  19863399 gcacgaaatcataagtttcataaatccctaagtttaagtcatccataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgttaataaaacta 19863300  T
Q  117 ttcaaaaaatcaactagttaattt 140  Q
    |  ||||||| ||||||| |||||    
T  19863299 tctaaaaaataaactagtaaattt 19863276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 34 - 246
Target Start/End: Original strand, 35176842 - 35177056
Alignment:
Q  34 tcataagtctct-aagtttaagtcatccataaaaccatccaaaa-aagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaact 131  Q
    |||||||||||| |||||| ||||| |||||||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||||  ||||| | || |    
T  35176842 tcataagtctcttaagttttagtcacccataaaaccatccaaaaaaagcaagtttcacaagttcataatgttgttaataaaactatctaaaaattaaatt 35176941  T
Q  132 agttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgca 231  Q
    ||| ||||| |||||||||||| |||||||||||| || ||||| |||| ||||| |||||| ||  |||| |||| |||||| | || ||| |||||||    
T  35176942 agtgaatttcttcaaaaggtcaacaaacaccaccaacgtaaccctaaccggcgtcgcaatcaccgacgtcgaaatctgaatttccaccgtcggaatcgca 35177041  T
Q  232 accctaactggtatg 246  Q
    ||||| |||||||||    
T  35177042 accctcactggtatg 35177056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 48966072 - 48966222
Alignment:
Q  21 aaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaagg----ttcacaagttcgtaaagttgttaataaaacta 116  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||  ||||    ||||||| ||       | | |||||||||||    
T  48966072 aaaatcataagtttcataagtctttaagtttaagccatccataaa-ccatccaaaaaaaaaaggaagtttcacaattt-------tcgctaataaaacta 48966163  T
Q  117 ttcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccc 175  Q
    |  ||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||    
T  48966164 tctaaaaaataaactagttaatttcttcaaaaggtcaacaaacaccaccaccgcaaccc 48966222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 46042383 - 46042298
Alignment:
Q  64 aaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    |||||||||||||||| ||| ||||||| ||  |||||||||||||||| |||| |||||||| |||||||||||||  |||||||    
T  46042383 aaaccatccaaaaaagtaagtttcacaattttctaaagttgttaataaacctatccaaaaaataaactagttaatttcgtcaaaag 46042298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 52182542 - 52182490
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactat 117  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  52182542 aaccatccaaaaaagtaagcttcacaagttcctaaagttgttaataaaactat 52182490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 226396 - 226321
Alignment:
Q  74 aaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    |||||||||| |||| |||||  |||||||||||||||| ||||  ||||||| ||||||||||||| ||||||||    
T  226396 aaaaagcaagtttcataagtttctaaagttgttaataaacctatctaaaaaataaactagttaattttttcaaaag 226321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 42637749 - 42637796
Alignment:
Q  64 aaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataa 111  Q
    |||||||||||||||||||| | ||||||||  |||||||||||||||    
T  42637749 aaaccatccaaaaaagcaagttgcacaagtttctaaagttgttaataa 42637796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 1242920 - 1243006
Alignment:
Q  67 ccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtca 153  Q
    |||||| |||||| ||| ||||||||||  |||| |||  ||||||||||| |||||||  |||||| |||||| ||| ||||||||    
T  1242920 ccatcccaaaaagaaagtttcacaagtttctaaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtca 1243006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 41353903 - 41353817
Alignment:
Q  67 ccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtca 153  Q
    |||||| |||||| ||| ||||||||||  |||| |||  ||||||||||| |||||||  |||||| |||||| ||| ||||||||    
T  41353903 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtca 41353817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 273
Target Start/End: Original strand, 48966225 - 48966305
Alignment:
Q  193 atcggtgtcgcaatcagaatttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaact 273  Q
    |||||||||| |||  |||||| | || ||| ||| |||||| ||||| |||||||||  | |||||||||||||||||||    
T  48966225 atcggtgtcgaaatttgaatttccaccgtcggaattgcaaccataactagtatgtgctcccatgttcatggtttgagaact 48966305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 12737639 - 12737875
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    ||||||||||||||||| ||||||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |    
T  12737639 aacgcacaaaatcataaatttcataagtctctaagtttaaaccttccataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgttaataata 12737738  T
Q  114 ctattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatt 213  Q
    ||||   |||||| ||||||||||||| |||||||||||| ||||||||||||| ||||||| ||||| |||| ||||||||||  ||| |||| |||||    
T  12737739 ctatcttaaaaataaactagttaatttcttcaaaaggtcaacaaacaccaccactgcaaccctaaccaacgtcgcaatcatcggcatcgaaatctgaatt 12737838  T
Q  214 taccccatcgaaatcgcaaccctaactggtatgtgct 250  Q
    | | || ||| |||||||||||||||| ||| |||||    
T  12737839 ttcaccgtcggaatcgcaaccctaactagtacgtgct 12737875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 14 - 273
Target Start/End: Original strand, 12521961 - 12522220
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||| | | ||||||||||| | ||||||||||| ||||||||||| |||||    
T  12521961 aacgcaccaaatcataagtttcataagtctttaagtttaagtcatccataaatcaacccaaaaaagcatgtttcacaagttcctaaagttgttattaaaa 12522060  T
Q  114 ctattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatt 213  Q
    ||||  ||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||| || |  |  | |||||||||| ||||||||| |||||    
T  12522061 ctatcaaaaaaataaactagttaatttcttcaaaaggtcaacaaacaccaccgccgcaacccaaatcgacaacgcaatcatcggcgtcgcaatctgaatt 12522160  T
Q  214 taccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaact 273  Q
    | | ||  || ||||||||||||||||||||||||||  | ||||||| |||||||||||    
T  12522161 tccaccgccggaatcgcaaccctaactggtatgtgctcccctgttcatcgtttgagaact 12522220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 42423750 - 42423489
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaa--gcaaggttcacaagttcgtaaagttgttaataa 111  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  | ||| ||||||| ||| |||||||||||||||    
T  42423750 aacgcccaaaatcataagtttcataagtctctaagtttaagtcatccataaa-ccatccaaaaaaaaggaagtttcacaatttcctaaagttgttaataa 42423652  T
Q  112 aactattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaa 211  Q
    ||||||  ||||||| ||||||||||||| |||||||||||| | ||||||||||||||||||| |||  ||||| |||||| ||| |||| |||| |||    
T  42423651 aactatctaaaaaataaactagttaatttcttcaaaaggtcaactaacaccaccaccgcaaccctaactggcgtcgcaatcaccggcgtcgaaatctgaa 42423552  T
Q  212 tttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    ||| | || | | ||| |||||| ||||||||||||||| || |||||||||||||| ||||||    
T  42423551 tttccaccgttggaat-gcaaccataactggtatgtgctctcatgttcatggtttgaaaactca 42423489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 27878166 - 27878428
Alignment:
Q  14 aacgcacaaaatcataagtttcataa-gtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaa 112  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  27878166 aacgcacaaaatcataagtttcataaagtctctaagtttaagtcatctataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgataataaa 27878265  T
Q  113 actattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaat 212  Q
    |||||  ||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||| ||||  | | ||||||| ||| |||| ||||  |||    
T  27878266 actatctaaaaaataaactagttaatttcttcaaaaggtcaacaaacaccaccatcgcaaccctaaccgacataacaatcaccggcgtcgaaatctaaat 27878365  T
Q  213 ttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    || | |  ||| |||  ||||||| | |||||||||||  | |||||||||||| ||||||||    
T  27878366 ttccactttcggaatgacaaccctgattggtatgtgctcccatgttcatggtttcagaactca 27878428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 28018347 - 28018609
Alignment:
Q  14 aacgcacaaaatcataagtttcataa-gtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaa 112  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  28018347 aacgcacaaaatcataagtttcataaagtctctaagtttaagtcatctataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgataataaa 28018446  T
Q  113 actattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaat 212  Q
    |||||  ||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||| ||||  | | ||||||| ||| |||| ||||  |||    
T  28018447 actatctaaaaaataaactagttaatttcttcaaaaggtcaacaaacaccaccatcgcaaccctaaccgacataacaatcaccggcgtcgaaatctaaat 28018546  T
Q  213 ttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    || | |  ||| |||  ||||||| | |||||||||||  | |||||||||||| ||||||||    
T  28018547 ttccactttcggaatgacaaccctgattggtatgtgctcccatgttcatggtttcagaactca 28018609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 15 - 275
Target Start/End: Original strand, 27915111 - 27915372
Alignment:
Q  15 acgcacaaaatcataagtttcataa-gtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  27915111 acgcacaaaatcataagtttcctaaagtctctaagtttaagtcatctataaaaccatccaaaaaagcaagtttcacaagttcctaaaattgttaataaaa 27915210  T
Q  114 ctattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatt 213  Q
    ||||  ||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||| ||||  | | ||||||| ||| |||| ||||  ||||    
T  27915211 ctatctaaaaaataaactagttaatttcttcaaaaggtcaacaaacaccaccatcgcaaccctaaccgacataacaatcaccggcgtcgaaatctaaatt 27915310  T
Q  214 taccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    | | |  ||| |||| ||||||| | |||||||||||  | |||||||||||| ||||||||    
T  27915311 ttcgctttcggaatcacaaccctgattggtatgtgctcccatgttcatggtttcagaactca 27915372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 15 - 275
Target Start/End: Original strand, 27961530 - 27961791
Alignment:
Q  15 acgcacaaaatcataagtttcataa-gtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  27961530 acgcacaaaatcataagtttcctaaagtctctaagtttaagtcatctataaaaccatccaaaaaagcaagtttcacaagttcctaaaattgttaataaaa 27961629  T
Q  114 ctattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatt 213  Q
    ||||  ||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||| ||||  | | ||||||| ||| |||| ||||  ||||    
T  27961630 ctatctaaaaaataaactagttaatttcttcaaaaggtcaacaaacaccaccatcgcaaccctaaccgacataacaatcaccggcgtcgaaatctaaatt 27961729  T
Q  214 taccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    | | |  ||| |||| ||||||| | |||||||||||  | |||||||||||| ||||||||    
T  27961730 ttcgctttcggaatcacaaccctgattggtatgtgctcccatgttcatggtttcagaactca 27961791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 275
Target Start/End: Complemental strand, 44977275 - 44977015
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  44977275 aacgcacaaaatcataagtttcataagtctctaagttcaagtcatccataaaaccattcaaaaaagcaagtttcacaagttcctaaagttgttaataaaa 44977176  T
Q  114 ctattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatt 213  Q
    ||||  ||||||| ||||||||||||| |||||||||| | |||||| ||| ||| |||||| |||  | ||| |  ||||| |||||| |||| |||||    
T  44977175 ctatctaaaaaataaactagttaatttcttcaaaaggtta-caaacagcactaccacaaccctaactggtgtcgctctcatccgtgtcgaaatctgaatt 44977077  T
Q  214 taccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    | | || ||  ||||| ||| ||||| ||||||||||  | |||||||||||||||||||||    
T  44977076 ttcaccgtcagaatcgtaactctaacaggtatgtgctcccctgttcatggtttgagaactca 44977015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 14 - 207
Target Start/End: Original strand, 27974522 - 27974716
Alignment:
Q  14 aacgcacaaaatcataagtttcataa-gtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaa 112  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | |||    
T  27974522 aacgcacaaaatcataagtttcataatgtctctaagtttaagtcatccataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgttgacaaa 27974621  T
Q  113 actattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatc 207  Q
    ||||   ||||||| ||||||||||||| |||||||||| | ||||||||||||||| || || |||| || || |||||| ||| |||| ||||    
T  27974622 actacctaaaaaataaactagttaatttcttcaaaaggtaaacaaacaccaccaccgaaatcctaaccggcatcgcaatcaccggcgtcggaatc 27974716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 14 - 207
Target Start/End: Original strand, 28031791 - 28031985
Alignment:
Q  14 aacgcacaaaatcataagtttcataa-gtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaa 112  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | |||    
T  28031791 aacgcacaaaatcataagtttcataatgtctctaagtttaagtcatccataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgttgacaaa 28031890  T
Q  113 actattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatc 207  Q
    ||||   ||||||| ||||||||||||| |||||||||| | ||||||||||||||| || || |||| || || |||||| ||| |||| ||||    
T  28031891 actacctaaaaaataaactagttaatttcttcaaaaggtaaacaaacaccaccaccgaaatcctaaccggcatcgcaatcaccggcgtcggaatc 28031985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 8029404 - 8029578
Alignment:
Q  9 agatgaacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaa 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| |||||||    
T  8029404 agattaacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatcc-aaaaagcaagtttcacaagttcctaaaattgttaa 8029502  T
Q  109 taaaactattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgt 185  Q
    |||||||||  ||||||| ||||||||||||| || |||| |||| ||||||| |||||| |||||| |||| ||||    
T  8029503 taaaactatctaaaaaataaactagttaatttctt-aaaaagtcaacaaacactaccaccacaaccctaaccggcgt 8029578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 27869492 - 27869661
Alignment:
Q  14 aacgcacaaaatcataagtttcataa-gtctctaagtttaagtcatccataaaaccatccaaaaaag---caaggttcacaagttcgtaaagttgttaat 109  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    |||| ||||||||||| |||||||||||||    
T  27869492 aacgcacaaaatcataagtttcataaagtctctaagtttaagtcatctataaaaccatccaaaaaaaaaacaagtttcacaagttcctaaagttgttaat 27869591  T
Q  110 aaaactattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaacc 180  Q
    |||||||| | |||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  27869592 aaaactat-ctaaaaataaactagttaatttcttcaaaaggtcaacaaacaccaccaccgcaaccctaacc 27869661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 108 - 281
Target Start/End: Original strand, 6387748 - 6387921
Alignment:
Q  108 ataaaactattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatc 207  Q
    |||||||||| |||||||| |||| | |||||| ||||||| |||||||||||||||||||||||||| ||||| | || |||||| ||| || ||||||    
T  6387748 ataaaactatccaaaaaataaactggctaatttcttcaaaaagtcatcaaacaccaccaccgcaaccctaaccaacatcgcaatcaccggcgttgcaatc 6387847  T
Q  208 agaatttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactcaaataag 281  Q
     |||||| |||||||||||||||||||||||||  |||||||| || ||||||||||||||||||||| |||||    
T  6387848 ggaatttcccccatcgaaatcgcaaccctaactaatatgtgctctcatgttcatggtttgagaactcagataag 6387921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 34 - 193
Target Start/End: Complemental strand, 24082723 - 24082564
Alignment:
Q  34 tcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactag 133  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||||||||||||||||||| |||||||  ||||||| |||||     
T  24082723 tcataagtctctaagtttaagccatccataaaataatccaaaaaagcaagtttcacaagttcgtaaagttgttaattaaactatctaaaaaataaactac 24082624  T
Q  134 ttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatca 193  Q
    ||||||| |||| ||||||||||||||||||  |||||| ||  |||||| |||||||||    
T  24082623 ttaatttcttcagaaggtcatcaaacaccactgccgcaatccttaccagcatcacaatca 24082564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 6387457 - 6387559
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  6387457 aacgcacataattataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaagtttcacaagtttataaagttgttaataaaa 6387556  T
Q  114 cta 116  Q
    |||    
T  6387557 cta 6387559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 41394405 - 41394306
Alignment:
Q  17 gcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaacta 116  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||    
T  41394405 gcacaaaatcataagtttcataagtctataaacttaagtcatccataaaaccatctaaaaaagcaagtttcacaagttcctaaagttgttaataaaacta 41394306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 173
Target Start/End: Original strand, 3007408 - 3007524
Alignment:
Q  56 catccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtcatc 155  Q
    |||||||| ||||||||||||||  ||| || |||||||| |||||||||||||||||||||  ||||||| ||||||||||||| |||||| ||||| |    
T  3007408 catccatagaaccatccaaaaaaa-aagttttacaagttcataaagttgttaataaaactatataaaaaataaactagttaatttcttcaaatggtcaac 3007506  T
Q  156 aaacaccaccaccgcaac 173  Q
    ||||| ||||||||||||    
T  3007507 aaacaacaccaccgcaac 3007524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 33177496 - 33177560
Alignment:
Q  85 ttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    ||||||||||  |||||||||||||||| |||| |||||||| ||||||||||||| ||||||||    
T  33177496 ttcacaagtttttaaagttgttaataaacctatccaaaaaataaactagttaattttttcaaaag 33177560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 37131184 - 37131245
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaat 126  Q
    ||||||||||||| ||||| ||||||||||| |||| ||||||||||||||||  |||||||    
T  37131184 aaccatccaaaaaggcaagtttcacaagttcctaaaattgttaataaaactataaaaaaaat 37131245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 35879885 - 35879824
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaat 126  Q
    ||||||||||||| ||||| |||||| |||| ||| |||||||||||||||||  |||||||    
T  35879885 aaccatccaaaaaggcaagtttcacacgttcctaacgttgttaataaaactatataaaaaat 35879824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 17234932 - 17234880
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactat 117  Q
    ||||||||||||| ||||| |||||||||||  |||||||||||| |||||||    
T  17234932 aaccatccaaaaaggcaagtttcacaagttcacaaagttgttaatcaaactat 17234880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 24067321 - 24067269
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactat 117  Q
    |||||| |||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  24067321 aaccattcaaaaaggcaagtttctcaagttcctaaagttgttaataaaactat 24067269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 41394274 - 41394226
Alignment:
Q  225 aatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaact 273  Q
    ||||||||||||||||||||||||||  | |||||||| ||||||||||    
T  41394274 aatcgcaaccctaactggtatgtgctcccctgttcatgatttgagaact 41394226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 19484675 - 19484589
Alignment:
Q  67 ccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtca 153  Q
    |||||| |||||| ||| ||||||||||  |||| |||  ||||||||||| |||||||  |||||| |||||| ||| ||||||||    
T  19484675 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtca 19484589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 4870784 - 4870837
Alignment:
Q  97 taaagttgttaataaaactattc-aaaaaatcaactagttaatttattcaaaag 149  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||  ||||||||    
T  4870784 taaagttgttaataaaactatccaaaaaaataaactagttaattacttcaaaag 4870837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 7761006 - 7760961
Alignment:
Q  72 caaaaaagcaaggttcacaagttcgtaaagttgttaataaaactat 117  Q
    |||||| ||||| ||||||||||| || ||||||||||||||||||    
T  7761006 caaaaaggcaagtttcacaagttcctagagttgttaataaaactat 7760961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 3007561 - 3007609
Alignment:
Q  225 aatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaact 273  Q
    |||| |||||||||||| ||||| || |||||||||| |||||||||||    
T  3007561 aatcccaaccctaactgatatgtactctcttgttcatagtttgagaact 3007609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 1e-66; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 29 - 273
Target Start/End: Complemental strand, 43172595 - 43172351
Alignment:
Q  29 aagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatca 128  Q
    ||||||| |||||||||||||||||||| | || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||| |    
T  43172595 aagtttcttaagtctctaagtttaagtcgttcacaaaaccatccaaaaaagcaagtttcacaagttcgtaaagttgttaataaaactatctaaaaaataa 43172496  T
Q  129 actagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatc 228  Q
    |||||||||||| |||||||||||| || |||||||||||||||||| |||| | ||| |||||||||| |||| |||| |||||| |  | ||  ||||    
T  43172495 actagttaatttcttcaaaaggtcaacagacaccaccaccgcaaccctaaccggtgtcgcaatcatcggcgtcgaaatctgaatttccatcgtcagaatc 43172396  T
Q  229 gcaaccctaactggtatgtgctatcttgttcatggtttgagaact 273  Q
    ||||||||||||||||||||||  | | ||||||| |||||||||    
T  43172395 gcaaccctaactggtatgtgctcccctattcatggattgagaact 43172351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 23017525 - 23017367
Alignment:
Q  17 gcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaacta 116  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  23017525 gcacaaaatcataagtttcataagtctctaagtttaagtcattcataaaaccatccaaaaaagcaagtttcacaagtttctaaagttgttaataaaacta 23017426  T
Q  117 ttcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccc 175  Q
    |  ||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||    
T  23017425 tctaaaaaataaactagttaattttttcaaaaggtcaacaaacaccaccaccgcaaccc 23017367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 21486681 - 21486508
Alignment:
Q  14 aacgcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  21486681 aacgcacaaaatcataagtttcataagtctctaagtttaagtcattcataaaactatccaaaaaagcaagtttcacaagttcctaaagttgttaataaaa 21486582  T
Q  114 ctat-tcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtc 186  Q
    |||| | ||||||| ||||||||||||| |||||||||||| ||||||||||||| |||| || |||| |||||    
T  21486581 ctatctaaaaaaataaactagttaattttttcaaaaggtcaacaaacaccaccactgcaatcctaaccggcgtc 21486508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 56 - 275
Target Start/End: Complemental strand, 16710040 - 16709821
Alignment:
Q  56 catccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtcatc 155  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||  ||||||| ||| ||||||||| |||||||||||| |    
T  16710040 catccataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgttaataagactatctaaaaaataaacaagttaatttcttcaaaaggtcaac 16709941  T
Q  156 aaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaaccctaactggtatgtgctatctt 255  Q
    ||||| |||||||||||||| |||  | ||| |||||| ||  || | |||| |||||| | || ||| ||||||||||||||||||||||||||  | |    
T  16709940 aaacatcaccaccgcaaccctaactggtgtcgcaatcaccgacgttgaaatctgaatttccaccgtcggaatcgcaaccctaactggtatgtgctcccct 16709841  T
Q  256 gttcatggtttgagaactca 275  Q
    ||||||||||||||||||||    
T  16709840 gttcatggtttgagaactca 16709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 56 - 275
Target Start/End: Complemental strand, 17684276 - 17684057
Alignment:
Q  56 catccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtcatc 155  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||  ||||||| ||| ||||||||| |||||||||||| |    
T  17684276 catccataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgttaataagactatctaaaaaataaacaagttaatttcttcaaaaggtcaac 17684177  T
Q  156 aaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaaccctaactggtatgtgctatctt 255  Q
    ||||| |||||||||||||| |||  | ||| |||||| ||  || | |||| |||||| | || ||| ||||||||||||||||||||||||||  | |    
T  17684176 aaacatcaccaccgcaaccctaactggtgtcgcaatcaccgacgttgaaatctgaatttccaccgtcggaatcgcaaccctaactggtatgtgctcccct 17684077  T
Q  256 gttcatggtttgagaactca 275  Q
    ||||||||||||||||||||    
T  17684076 gttcatggtttgagaactca 17684057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 42611055 - 42610901
Alignment:
Q  17 gcacaaaatcata--agtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaac 114  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  42611055 gcacaaaatcatataagtttcataagtctctaagtttaagtaatccataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgttaataaaac 42610956  T
Q  115 tattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccg 169  Q
     ||  ||||| |  |||||||||||| |||||||||||| |||||||||||||||    
T  42610955 catctaaaaactagactagttaattttttcaaaaggtcaacaaacaccaccaccg 42610901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 90 - 281
Target Start/End: Original strand, 5771747 - 5771937
Alignment:
Q  90 aagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcaca 189  Q
    |||||||||||||| |||||||||||||  ||||||| |||| |||||||| ||||||||||||||||||||||||| |||||| | ||||||||||||     
T  5771747 aagttcgtaaagtttttaataaaactatcaaaaaaataaact-gttaatttcttcaaaaggtcatcaaacaccaccatcgcaactctaaccagcgtcacg 5771845  T
Q  190 atcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactcaaataag 281  Q
    |||| |||||| ||| ||||||||| |||  ||| ||||| |||||||||||||||||||| || |||||||  |||||||||||| |||||    
T  5771846 atcaccggtgttgcagtcagaatttcccctgtcggaatcgtaaccctaactggtatgtgctctcatgttcatcttttgagaactcagataag 5771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 31445885 - 31445777
Alignment:
Q  17 gcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaacta 116  Q
    |||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  31445885 gcacaaaatcataagtttta-aagtctctaagtttaagccatccataaaaccatccaaaaatgcaagtttcacaagttcctaaagttgttaataaaacta 31445787  T
Q  117 ttcaaaaaat 126  Q
    |  |||||||    
T  31445786 tctaaaaaat 31445777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 6268941 - 6268856
Alignment:
Q  64 aaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    ||||||| ||||||| |||| ||||||||||  |||||||||||||||| |||||||| |||  ||||||||||||| ||||||||    
T  6268941 aaaccattcaaaaaaacaagtttcacaagtttctaaagttgttaataaacctattcaagaaacaaactagttaattttttcaaaag 6268856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 42043810 - 42043744
Alignment:
Q  56 catccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaa 123  Q
    ||||||||||||||||||||||||||| ||||||| |||  || |||||||||||||||||| |||||    
T  42043810 catccataaaaccatccaaaaaagcaa-gttcacatgtttctagagttgttaataaaactatccaaaa 42043744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 33496988 - 33497040
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactat 117  Q
    ||||||||||||  ||||| ||||||||||| |||||||||||||||||||||    
T  33496988 aaccatccaaaatggcaagtttcacaagttcctaaagttgttaataaaactat 33497040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 23017332 - 23017282
Alignment:
Q  225 aatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    |||||||||||||||||||||||| |  | |||||||||||||||||||||    
T  23017332 aatcgcaaccctaactggtatgtggtcccatgttcatggtttgagaactca 23017282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 4639513 - 4639599
Alignment:
Q  67 ccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtca 153  Q
    |||||| |||||| ||| ||||||||||  |||| |||  ||||||||||| |||||||  |||||| |||||| ||| ||||||||    
T  4639513 ccatcccaaaaagaaagtttcacaagtttataaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtca 4639599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 14741913 - 14741827
Alignment:
Q  67 ccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtca 153  Q
    |||||| |||||| ||| ||||||||||  |||| |||  ||||||||||| |||||||  |||||| |||||| ||| ||||||||    
T  14741913 ccatcccaaaaagaaagtttcacaagtttctaaacttgagaataaaactatccaaaaaacaaactaggtaatttcttcgaaaggtca 14741827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 277
Target Start/End: Complemental strand, 27149174 - 27149128
Alignment:
Q  231 aaccctaactggtatgtgctatcttgttcatggtttgagaactcaaa 277  Q
    ||||||||||||||||||||    |||||||||||||||||||||||    
T  27149174 aaccctaactggtatgtgcttcactgttcatggtttgagaactcaaa 27149128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 1254158 - 1254210
Alignment:
Q  97 taaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    |||||||||||||||| |||| |||||||| || |||||| ||| ||||||||    
T  1254158 taaagttgttaataaacctatccaaaaaataaattagttagtttcttcaaaag 1254210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 29716461 - 29716683
Alignment:
Q  18 cacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| | ||||||||| ||||||| |||||||||||||    
T  29716461 cacaaaatcataagtttcataagtctctaagtttaagtcatccacaaaaccattcaaaaaagcaagttacacaagttcctaaagtttttaataaaactat 29716560  T
Q  118 tcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttacc 217  Q
      ||||||| ||||||||||||| |||||||||||| ||| ||||||||||| ||||| ||||  ||||  |||||||||||||| || | |||||| |     
T  29716561 ctaaaaaataaactagttaatttcttcaaaaggtcaacaagcaccaccaccgtaaccctaaccgacgtcgtaatcatcggtgtcgaaaactgaatttcca 29716660  T
Q  218 ccatcgaaatcgcaaccctaact 240  Q
    || ||||||||||||||||||||    
T  29716661 ccgtcgaaatcgcaaccctaact 29716683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 55 - 275
Target Start/End: Complemental strand, 34218934 - 34218715
Alignment:
Q  55 tcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtcat 154  Q
    |||||||||||| |||||||||| | ||  || |||||||| | |||||||| ||||||||||  | ||||| || |||||||||| |||||| | |||     
T  34218934 tcatccataaaatcatccaaaaatgtaacttttacaagttcttgaagttgttgataaaactatctagaaaataaattagttaatttcttcaaa-gatcaa 34218836  T
Q  155 caaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaaccctaactggtatgtgctatct 254  Q
    ||||||||||||||||||||| |||   ||||||||||| ||| |||| |||| |||||| | || ||| ||| ||||||||||||| ||||||||  |     
T  34218835 caaacaccaccaccgcaaccctaactgacgtcacaatcaccggcgtcgaaatctgaatttccaccgtcggaattgcaaccctaactgatatgtgctcccc 34218736  T
Q  255 tgttcatggtttgagaactca 275  Q
    | |||||||||||||||||||    
T  34218735 tattcatggtttgagaactca 34218715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 21490107 - 21490047
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaa 125  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||| ||||||    
T  21490107 aaccatccaaaaaggcaagtttcacaagttcttaaagttgttaataaaactattaaaaaaa 21490047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 31913883 - 31913806
Alignment:
Q  64 aaaccatccaaaaaag-caaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaattt 140  Q
    |||||||||||||||  |||| ||||||||||  |||||||||||||||| |||| |||||||| |||||||||||||    
T  31913883 aaaccatccaaaaaacacaagtttcacaagtttttaaagttgttaataaacctatccaaaaaataaactagttaattt 31913806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 36196017 - 36196069
Alignment:
Q  97 taaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  36196017 taaagttgttaataaaactatccaaaaaataaactagttaatttcttcaaaag 36196069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 15286133 - 15286185
Alignment:
Q  97 taaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||| ||||||||    
T  15286133 taaagttgttaataaaactatccaaaaaataaacaagttaatttcttcaaaag 15286185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 16497519 - 16497571
Alignment:
Q  65 aaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactat 117  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||||| ||||    
T  16497519 aaccatccaaaaaagcaagtttcacaagttgctaaagttgttaataaacctat 16497571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 5650412 - 5650498
Alignment:
Q  67 ccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaaggtca 153  Q
    |||||| |||||||||| ||||||||||  |||| |||  |||||||||||  ||||||  || ||| |||||| ||||||||||||    
T  5650412 ccatcccaaaaagcaagtttcacaagtttctaaacttgagaataaaactatcaaaaaaacaaattaggtaatttcttcaaaaggtca 5650498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 109; Significance: 9e-55; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 34 - 275
Target Start/End: Complemental strand, 9387 - 9142
Alignment:
Q  34 tcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaataaaactattcaaaaaatcaactag 133  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||  ||||||| ||||||    
T  9387 tcataagtctctaagtttaagtcattcataaaaccatccaaaaaagcaagtttcacaagttcctaaagttgttaataaaactatctaaaaaataaactag 9288  T
Q  134 ttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaatttaccccatcgaaatcgcaac 233  Q
    ||||||| ||||||||| || ||||||| |||||  |||||| |||| | ||| |||| | ||| || | |||  |||||| | || |||||||| ||||    
T  9287 ttaatttcttcaaaaggacaacaaacactaccacaacaaccctaaccggtgtcgcaataaacggcgttgaaatatgaatttccaccgtcgaaatcacaac 9188  T
Q  234 cctaactggtat----gtgctatcttgttcatggtttgagaactca 275  Q
    ||||||||||||    |||||  | |||||||||||||||||||||    
T  9187 cctaactggtatatatgtgctcccctgttcatggtttgagaactca 9142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 275
Target Start/End: Complemental strand, 89826 - 89567
Alignment:
Q  17 gcacaaaatcataagtttcataagtctctaagtttaagtcatccataaaaccatccaaaaaagcaaggttcacaagttcgtaaagttgttaat-aaaact 115  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||    
T  89826 gcacaaaatcataagtttcataagtctctaaatttaagccatccataaaaccatccaaaaaagaaagtttcacaagttcctaaagttgttaataaaaact 89727  T
Q  116 attcaaaaaatcaactagttaatttattcaaaaggtcatcaaacaccaccaccgcaaccccaaccagcgtcacaatcatcggtgtcgcaatcagaattta 215  Q
    ||  ||||||| ||||| ||||||| |||||||||||| |||| |||| ||| ||||||| |||| |||||  ||||  |   | || |||  ||||||     
T  89726 atctaaaaaataaactatttaatttcttcaaaaggtcaacaaagaccatcactgcaaccctaaccggcgtcgtaatcgcctacggcgaaatatgaatttc 89627  T
Q  216 ccccatcgaaatcgcaaccctaactggtatgtgctatcttgttcatggtttgagaactca 275  Q
    | || ||| ||||||||||||||||| ||| ||||  | |||||||||||||||||||||    
T  89626 caccgtcggaatcgcaaccctaactgttatatgcttccatgttcatggtttgagaactca 89567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 38294 - 38242
Alignment:
Q  97 taaagttgttaataaaactattcaaaaaatcaactagttaatttattcaaaag 149  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  38294 taaaattgttaataaaactattcaaaaaataaactagttaatttcttcaaaag 38242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University