View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453_high_41 (Length: 340)
Name: NF11453_high_41
Description: NF11453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453_high_41 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 44694590 - 44694280
Alignment:
| Q |
17 |
atgaaagcataaaaggaaattaatgatgaaataaaccttgatattgggaatagagtatgccaaattccccaagtgagacatgtgtgcatacattcttgct |
116 |
Q |
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| T |
44694590 |
atgaaagcataaaaggaaattaatgatgaaataaaccttgatattgggaatagagtatgccaaattccccaagtgagacatgtgtgcatacattcttgct |
44694491 |
T |
|
| Q |
117 |
tcaactaaagttaccctacgaagcattctagaaaacgactctctatcaaaccgaatctcttcatcttcattttcatcgtctacctcttcatcaactctac |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44694490 |
tcaactaaagttaccctacgaagcattctagaaaacgactctctatcaaaccgaatctcttcatcttcattttcatcgtctacctcttcatcaactctac |
44694391 |
T |
|
| Q |
217 |
aaacatcacattcatcttcgtcgttatcaccactctcttgttcacctttccaaacagaattaagatcaaaaaccttgaaaacccagttcccattttgtcc |
316 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44694390 |
aaacatcacattcatctccgtcgttatcaccactctcttgttcccctttccaaacagaattaagatcaaaaaccttgaaaacccagttcccattttgtcc |
44694291 |
T |
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| Q |
317 |
atctccttctt |
327 |
Q |
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||||||||||| |
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| T |
44694290 |
atctccttctt |
44694280 |
T |
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