View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453_high_63 (Length: 269)
Name: NF11453_high_63
Description: NF11453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453_high_63 |
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Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 6 - 257
Target Start/End: Complemental strand, 41906744 - 41906493
Alignment:
| Q |
6 |
aagtaaattcaactttttgcatcatctcatataagcttgcaatataataacgattttcacgtctccaagagcttataaatctgaaatattttcgttcata |
105 |
Q |
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| T |
41906744 |
aagtaaattcaactttttgcaccatctcatataagcttgcaatataataacgattttcacgtctccaagagcttataaatctgaaatattttcgttcata |
41906645 |
T |
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| Q |
106 |
cacttaccacaaggtcatatcttttgttcatattccatcagccaagataaaggacacaaactatctttcagtcaggtttggcttctattttgatgtctct |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41906644 |
cacttaccacaaggtcatatcttttgttcatattccatcagccaagataaaggacacaaactatctttcagtcaggtttggcttctattttgatgtctct |
41906545 |
T |
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| Q |
206 |
tttcaataaccatgtttgtgttaagttacatattacttactttctgcgcctt |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41906544 |
tttcaataaccatgtttgtgttaagttacatattacttactttctgcgcctt |
41906493 |
T |
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