View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453_low_30 (Length: 377)
Name: NF11453_low_30
Description: NF11453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453_low_30 |
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Alignment Details
Target: chr8 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 1 - 367
Target Start/End: Original strand, 26624535 - 26624901
Alignment:
| Q |
1 |
tttcacaatagaaaagttgcttttaaacctctaaacttattagaccagcccaacttcatctattttgtttgcatctcctctatcagcgtacaaccatcgg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26624535 |
tttcacaatagaaaagttgcttttaaacctctaaacttattagaccagcccaacttcatctattttgtttgcatctcctctatcagcgtacaaccatcgg |
26624634 |
T |
|
| Q |
101 |
gtttctctctatttatgcccttgtgattcatggtatagttcatacacaatggtaaactttttaatctccaannnnnnnncactatgattctttctataac |
200 |
Q |
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|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
26624635 |
gtttctctatatttatgcctttgtgattcatggtatagttcatacacaatggtaaactttttaatctccaattttttttcactatgattctttctataac |
26624734 |
T |
|
| Q |
201 |
catagggtgatggagtttttccttcaacnnnnnnnattgattttggttgaaattggaatttgggaggtcaaaggaaacactctaattatcttatcactct |
300 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26624735 |
catagggtgatggagtttttccttcaactttttttattgattttggttgaaattggaatttgggaggtcaaaggaaacactctaattatcttatcactct |
26624834 |
T |
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| Q |
301 |
gattctttcttctcattttccaataaaataccaatctaattatctctatcactctatttgattcttc |
367 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
26624835 |
gattctttcttctcattttccaataaaacaccaatctaattatctctatcactctatttgattcttc |
26624901 |
T |
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