View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453_low_52 (Length: 306)
Name: NF11453_low_52
Description: NF11453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453_low_52 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 19 - 298
Target Start/End: Original strand, 39919749 - 39920026
Alignment:
| Q |
19 |
aaatctcgctaaactgaataataataatcgatggattttgagagttaggttctaccttcggaaaactcctcaagttggccacattaagtgtctgtttggt |
118 |
Q |
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||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39919749 |
aaatctcgctaaacttaataataataatcgatggattttgag--ttaggttctaccttcggaaaactcctcaagttggccacattaagtgtctgtttggt |
39919846 |
T |
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| Q |
119 |
tagtggtgggaaggagttaatgcatgtctggagtgaagcaaattctctgcttcttgttccatgaccaaaaagtgcattgcgacgcgannnnnnnagttgc |
218 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
39919847 |
tagtggtgggaaggagttaacgcatgtctggagtgaagcaaattctctgcttcttgttccatgaccaaaaagtgcattgcgacgcgatttttttagttgc |
39919946 |
T |
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| Q |
219 |
cgcagatttgaaacttcacaccacacactaagcccatgccaaatctcacaaaactctgtataaacctccgcattcatctc |
298 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39919947 |
cgcggatttgaaacttcacaccacacactaagcccatgccaaatctcacaaaactctgtataaacctccgcattcatctc |
39920026 |
T |
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