View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11453_low_56 (Length: 293)

Name: NF11453_low_56
Description: NF11453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11453_low_56
NF11453_low_56
[»] chr1 (54 HSPs)
chr1 (120-278)||(46730156-46730314)
chr1 (31-121)||(25531778-25531868)
chr1 (31-121)||(48219813-48219903)
chr1 (31-124)||(39354435-39354528)
chr1 (31-123)||(50539258-50539350)
chr1 (31-121)||(48264982-48265072)
chr1 (31-121)||(52378989-52379079)
chr1 (33-121)||(32988522-32988610)
chr1 (31-121)||(50876364-50876454)
chr1 (31-121)||(38458729-38458819)
chr1 (31-123)||(3529174-3529266)
chr1 (36-120)||(49805428-49805512)
chr1 (31-124)||(30529221-30529314)
chr1 (32-124)||(23569846-23569938)
chr1 (31-122)||(32565745-32565836)
chr1 (31-121)||(42708504-42708594)
chr1 (31-116)||(45235016-45235101)
chr1 (31-123)||(47222212-47222304)
chr1 (33-125)||(50481274-50481366)
chr1 (31-110)||(29161853-29161932)
chr1 (31-121)||(37281092-37281182)
chr1 (33-118)||(16266165-16266250)
chr1 (33-121)||(16265033-16265121)
chr1 (33-121)||(26441637-26441725)
chr1 (35-99)||(38738153-38738217)
chr1 (33-121)||(43680069-43680157)
chr1 (31-106)||(1849714-1849789)
chr1 (34-121)||(16751627-16751714)
chr1 (35-121)||(48376158-48376244)
chr1 (36-117)||(4605002-4605083)
chr1 (31-104)||(31971558-31971631)
chr1 (33-121)||(3898744-3898832)
chr1 (33-121)||(24982351-24982439)
chr1 (38-118)||(14075738-14075818)
chr1 (31-80)||(41501779-41501828)
chr1 (86-122)||(3898570-3898606)
chr1 (86-122)||(16265259-16265295)
chr1 (86-122)||(16266388-16266424)
chr1 (86-122)||(25532004-25532040)
chr1 (86-122)||(26441860-26441896)
chr1 (33-93)||(31698761-31698821)
chr1 (86-122)||(43680296-43680332)
chr1 (86-122)||(48264810-48264846)
chr1 (93-124)||(23569671-23569702)
chr1 (86-121)||(30529050-30529085)
chr1 (86-121)||(39354264-39354299)
chr1 (86-121)||(50876590-50876625)
chr1 (33-71)||(23330502-23330540)
chr1 (62-92)||(43729774-43729804)
chr1 (86-124)||(52379215-52379253)
chr1 (86-123)||(45234847-45234884)
chr1 (92-124)||(1929487-1929519)
chr1 (86-122)||(24982577-24982613)
chr1 (86-122)||(42708726-42708762)
[»] chr4 (72 HSPs)
chr4 (31-124)||(46212521-46212614)
chr4 (31-123)||(3901310-3901402)
chr4 (31-122)||(46803630-46803721)
chr4 (31-122)||(28166273-28166364)
chr4 (31-122)||(45198511-45198602)
chr4 (31-122)||(47579286-47579377)
chr4 (31-121)||(3442515-3442605)
chr4 (31-121)||(21859090-21859180)
chr4 (31-121)||(21914953-21915043)
chr4 (33-122)||(5735270-5735359)
chr4 (31-124)||(26205875-26205968)
chr4 (33-128)||(5744256-5744351)
chr4 (33-121)||(4264134-4264222)
chr4 (31-119)||(28151993-28152081)
chr4 (31-121)||(6494588-6494678)
chr4 (31-116)||(37688204-37688289)
chr4 (31-122)||(7738990-7739081)
chr4 (31-121)||(18360144-18360234)
chr4 (31-121)||(36602694-36602784)
chr4 (31-121)||(39786527-39786617)
chr4 (31-116)||(20678758-20678843)
chr4 (31-119)||(49768447-49768535)
chr4 (31-121)||(4209363-4209453)
chr4 (31-121)||(23255935-23256025)
chr4 (33-123)||(55190887-55190977)
chr4 (31-122)||(5123328-5123419)
chr4 (31-121)||(1377032-1377122)
chr4 (31-125)||(50033016-50033110)
chr4 (33-122)||(19634021-19634110)
chr4 (32-128)||(19652427-19652523)
chr4 (31-121)||(19525885-19525975)
chr4 (31-128)||(19731336-19731433)
chr4 (33-121)||(25644359-25644447)
chr4 (31-122)||(39260302-39260392)
chr4 (32-122)||(19170711-19170801)
chr4 (31-125)||(50035535-50035629)
chr4 (31-101)||(53568374-53568444)
chr4 (33-102)||(6923113-6923182)
chr4 (37-125)||(51737130-51737218)
chr4 (31-90)||(3443558-3443617)
chr4 (33-99)||(19631330-19631396)
chr4 (51-121)||(39195672-39195742)
chr4 (33-92)||(10181017-10181076)
chr4 (38-93)||(23603825-23603880)
chr4 (31-93)||(42187150-42187212)
chr4 (38-96)||(55014287-55014345)
chr4 (51-99)||(14958030-14958078)
chr4 (33-89)||(55997146-55997202)
chr4 (31-90)||(50971491-50971549)
chr4 (33-99)||(26659862-26659928)
chr4 (86-124)||(3442341-3442379)
chr4 (46-99)||(31486308-31486361)
chr4 (86-122)||(5735497-5735533)
chr4 (86-122)||(45198339-45198375)
chr4 (86-122)||(47579512-47579548)
chr4 (86-121)||(7738819-7738854)
chr4 (86-121)||(28152217-28152252)
chr4 (33-92)||(39193941-39194000)
chr4 (86-123)||(10385074-10385111)
chr4 (86-123)||(18359971-18360008)
chr4 (86-123)||(36602920-36602957)
chr4 (86-123)||(46803858-46803895)
chr4 (86-122)||(4209585-4209621)
chr4 (86-122)||(4264360-4264396)
chr4 (93-121)||(19170539-19170567)
chr4 (86-118)||(19525717-19525749)
chr4 (86-122)||(25644585-25644621)
chr4 (51-95)||(25678340-25678384)
chr4 (86-122)||(26205703-26205739)
chr4 (34-70)||(27976744-27976780)
chr4 (86-126)||(50971654-50971694)
chr4 (33-93)||(51736822-51736882)
[»] chr3 (55 HSPs)
chr3 (31-124)||(43137848-43137941)
chr3 (31-121)||(7459991-7460081)
chr3 (33-122)||(18659051-18659140)
chr3 (31-122)||(8559176-8559267)
chr3 (31-121)||(37832900-37832990)
chr3 (36-121)||(54840304-54840389)
chr3 (31-122)||(1327310-1327401)
chr3 (31-114)||(38833671-38833754)
chr3 (35-121)||(52668660-52668746)
chr3 (31-124)||(10571315-10571408)
chr3 (31-112)||(51062399-51062480)
chr3 (31-116)||(51392463-51392548)
chr3 (33-121)||(21906996-21907084)
chr3 (34-122)||(34827321-34827409)
chr3 (33-121)||(45167299-45167387)
chr3 (31-122)||(46483550-46483641)
chr3 (31-121)||(38492052-38492142)
chr3 (31-121)||(27848952-27849042)
chr3 (31-121)||(29728269-29728359)
chr3 (31-121)||(48707014-48707104)
chr3 (32-121)||(49057856-49057945)
chr3 (31-121)||(25097358-25097448)
chr3 (33-122)||(53066374-53066462)
chr3 (31-122)||(28690515-28690606)
chr3 (33-123)||(15503023-15503113)
chr3 (31-124)||(3547591-3547684)
chr3 (33-121)||(32951309-32951397)
chr3 (31-110)||(32285347-32285426)
chr3 (34-93)||(45093748-45093807)
chr3 (33-121)||(4238793-4238881)
chr3 (31-99)||(9145524-9145592)
chr3 (33-121)||(17052864-17052952)
chr3 (31-93)||(35718026-35718088)
chr3 (33-102)||(10435153-10435222)
chr3 (31-116)||(47638060-47638145)
chr3 (31-99)||(10437304-10437372)
chr3 (33-121)||(39435208-39435296)
chr3 (31-99)||(7671484-7671552)
chr3 (31-102)||(48143784-48143854)
chr3 (33-99)||(36665041-36665107)
chr3 (86-122)||(10435345-10435381)
chr3 (62-122)||(16365449-16365509)
chr3 (86-122)||(18659278-18659314)
chr3 (41-121)||(52550797-52550877)
chr3 (86-121)||(7459820-7459855)
chr3 (86-121)||(8559005-8559040)
chr3 (86-121)||(34827479-34827514)
chr3 (89-124)||(37833129-37833164)
chr3 (86-124)||(29728095-29728133)
chr3 (86-124)||(38833889-38833927)
chr3 (86-122)||(4238493-4238529)
chr3 (86-122)||(32951135-32951171)
chr3 (86-122)||(52668485-52668521)
chr3 (96-124)||(54674014-54674042)
chr3 (86-122)||(54840127-54840163)
[»] chr2 (48 HSPs)
chr2 (31-122)||(14372076-14372167)
chr2 (31-122)||(23671375-23671466)
chr2 (31-124)||(42038520-42038613)
chr2 (31-123)||(40425420-40425512)
chr2 (31-122)||(18718238-18718329)
chr2 (33-122)||(34826911-34827000)
chr2 (31-118)||(14707705-14707792)
chr2 (31-122)||(41172928-41173019)
chr2 (31-121)||(3987403-3987493)
chr2 (31-124)||(20517416-20517509)
chr2 (33-128)||(27559568-27559663)
chr2 (33-123)||(4045406-4045496)
chr2 (31-121)||(7443062-7443152)
chr2 (31-121)||(16941982-16942072)
chr2 (31-121)||(17012647-17012737)
chr2 (31-121)||(44283450-44283540)
chr2 (31-120)||(41463688-41463777)
chr2 (33-121)||(44330384-44330472)
chr2 (31-122)||(30708727-30708818)
chr2 (32-122)||(32776072-32776162)
chr2 (46-114)||(38588075-38588143)
chr2 (31-122)||(9877254-9877345)
chr2 (31-106)||(36199122-36199197)
chr2 (33-121)||(40598128-40598216)
chr2 (32-122)||(38963518-38963608)
chr2 (51-124)||(5030462-5030535)
chr2 (31-112)||(24283129-24283210)
chr2 (31-99)||(38137701-38137769)
chr2 (31-99)||(40898662-40898730)
chr2 (31-121)||(332278-332366)
chr2 (31-122)||(4045849-4045940)
chr2 (36-99)||(4083229-4083292)
chr2 (31-121)||(39418191-39418281)
chr2 (31-72)||(30776364-30776405)
chr2 (31-99)||(13399276-13399344)
chr2 (31-99)||(42951362-42951430)
chr2 (33-70)||(43925254-43925291)
chr2 (86-126)||(3987227-3987267)
chr2 (86-122)||(18718465-18718501)
chr2 (86-122)||(23671602-23671638)
chr2 (86-121)||(14707535-14707570)
chr2 (86-121)||(40425249-40425284)
chr2 (86-124)||(7442888-7442926)
chr2 (87-121)||(20917729-20917763)
chr2 (33-102)||(25786581-25786651)
chr2 (86-123)||(14372303-14372340)
chr2 (86-119)||(44283281-44283314)
chr2 (86-122)||(34827138-34827174)
[»] chr8 (44 HSPs)
chr8 (31-121)||(29790942-29791032)
chr8 (33-123)||(38845198-38845288)
chr8 (31-124)||(40013648-40013741)
chr8 (31-122)||(30289923-30290014)
chr8 (31-121)||(45081812-45081902)
chr8 (31-124)||(2805647-2805740)
chr8 (31-123)||(3293273-3293365)
chr8 (31-121)||(43066127-43066217)
chr8 (33-122)||(37709898-37709987)
chr8 (31-123)||(30380528-30380620)
chr8 (33-121)||(38739657-38739745)
chr8 (31-121)||(13138303-13138393)
chr8 (31-122)||(8351051-8351142)
chr8 (31-121)||(1580936-1581026)
chr8 (31-124)||(2986336-2986428)
chr8 (31-121)||(6470845-6470935)
chr8 (31-119)||(23248779-23248867)
chr8 (31-121)||(39361128-39361215)
chr8 (32-124)||(45253746-45253839)
chr8 (31-125)||(44123669-44123763)
chr8 (31-123)||(14522378-14522470)
chr8 (33-121)||(18809276-18809364)
chr8 (32-99)||(886239-886306)
chr8 (31-102)||(25256353-25256424)
chr8 (31-93)||(12893559-12893621)
chr8 (36-121)||(14847210-14847295)
chr8 (33-102)||(31127978-31128047)
chr8 (33-121)||(11854524-11854612)
chr8 (32-121)||(23764623-23764713)
chr8 (35-99)||(9302528-9302592)
chr8 (31-99)||(10658000-10658068)
chr8 (86-123)||(45082038-45082075)
chr8 (86-122)||(2805475-2805511)
chr8 (46-118)||(10536956-10537028)
chr8 (86-122)||(18809502-18809538)
chr8 (86-122)||(31127804-31127840)
chr8 (51-99)||(42785920-42785968)
chr8 (86-121)||(23249078-23249113)
chr8 (33-92)||(25173843-25173902)
chr8 (86-121)||(30290150-30290185)
chr8 (86-124)||(8350877-8350915)
chr8 (84-121)||(29708785-29708822)
chr8 (86-123)||(29791168-29791205)
chr8 (90-123)||(43066356-43066389)
[»] chr7 (50 HSPs)
chr7 (31-121)||(36819696-36819786)
chr7 (31-121)||(19072769-19072859)
chr7 (31-121)||(42086809-42086899)
chr7 (31-123)||(44479891-44479983)
chr7 (31-122)||(2400284-2400375)
chr7 (31-122)||(28185579-28185670)
chr7 (31-122)||(37951116-37951207)
chr7 (31-121)||(47080980-47081070)
chr7 (31-121)||(47713673-47713763)
chr7 (31-122)||(32619113-32619204)
chr7 (31-122)||(36859379-36859470)
chr7 (31-121)||(31466529-31466619)
chr7 (31-121)||(36905526-36905616)
chr7 (31-121)||(23474140-23474230)
chr7 (31-120)||(31110625-31110712)
chr7 (36-122)||(4612263-4612349)
chr7 (31-121)||(42834463-42834553)
chr7 (55-121)||(47713774-47713840)
chr7 (31-121)||(21392018-21392108)
chr7 (31-121)||(34478182-34478272)
chr7 (33-121)||(10464288-10464376)
chr7 (33-121)||(37231737-37231825)
chr7 (31-124)||(48531319-48531412)
chr7 (33-121)||(35500920-35501008)
chr7 (31-112)||(47537932-47538013)
chr7 (31-121)||(31497874-31497964)
chr7 (33-102)||(36643181-36643250)
chr7 (33-115)||(4033297-4033379)
chr7 (46-99)||(38198503-38198556)
chr7 (51-99)||(33613238-33613286)
chr7 (33-87)||(39982287-39982341)
chr7 (33-122)||(40348409-40348498)
chr7 (36-121)||(42493806-42493891)
chr7 (86-122)||(10464114-10464150)
chr7 (31-99)||(27916616-27916684)
chr7 (86-122)||(36643965-36644001)
chr7 (86-122)||(37950944-37950980)
chr7 (31-82)||(18795311-18795362)
chr7 (86-121)||(31466358-31466393)
chr7 (86-121)||(34478008-34478043)
chr7 (86-121)||(36819922-36819957)
chr7 (86-121)||(36905752-36905787)
chr7 (86-121)||(47081206-47081241)
chr7 (86-124)||(19072995-19073033)
chr7 (51-89)||(47841253-47841291)
chr7 (33-97)||(2450712-2450777)
chr7 (86-122)||(31110851-31110887)
chr7 (86-122)||(35500746-35500782)
chr7 (86-122)||(37231562-37231598)
chr7 (86-122)||(48531548-48531584)
[»] chr6 (24 HSPs)
chr6 (31-121)||(643602-643692)
chr6 (31-123)||(24150739-24150831)
chr6 (33-121)||(31854818-31854906)
chr6 (31-121)||(11114565-11114655)
chr6 (33-121)||(22020276-22020364)
chr6 (31-129)||(25435404-25435501)
chr6 (32-121)||(33121542-33121631)
chr6 (31-121)||(8796050-8796140)
chr6 (31-121)||(18991904-18991994)
chr6 (31-121)||(29403644-29403734)
chr6 (31-128)||(30237158-30237256)
chr6 (31-121)||(20662230-20662321)
chr6 (31-121)||(7098044-7098130)
chr6 (31-96)||(29986329-29986394)
chr6 (32-99)||(13207125-13207192)
chr6 (34-102)||(25163183-25163251)
chr6 (33-121)||(16434701-16434789)
chr6 (31-99)||(19068939-19069007)
chr6 (86-121)||(20662059-20662094)
chr6 (86-121)||(29979024-29979059)
chr6 (86-124)||(8796275-8796313)
chr6 (86-127)||(16696010-16696051)
chr6 (86-122)||(643430-643466)
chr6 (86-122)||(25163390-25163426)
[»] chr5 (50 HSPs)
chr5 (31-121)||(35448168-35448258)
chr5 (31-123)||(29627266-29627358)
chr5 (31-123)||(38697961-38698053)
chr5 (31-121)||(23988579-23988669)
chr5 (31-121)||(40512851-40512941)
chr5 (31-121)||(42148307-42148397)
chr5 (31-120)||(5364421-5364510)
chr5 (35-121)||(32334815-32334901)
chr5 (31-124)||(39894778-39894871)
chr5 (31-124)||(5213093-5213186)
chr5 (31-124)||(32002185-32002278)
chr5 (31-122)||(4925009-4925100)
chr5 (31-122)||(35290285-35290376)
chr5 (31-121)||(37516144-37516234)
chr5 (32-124)||(37843747-37843839)
chr5 (31-122)||(39036409-39036500)
chr5 (32-121)||(41411330-41411419)
chr5 (32-114)||(14475406-14475488)
chr5 (32-121)||(1830654-1830743)
chr5 (32-121)||(40316121-40316210)
chr5 (31-123)||(43517231-43517323)
chr5 (31-121)||(30779916-30780006)
chr5 (31-97)||(19889678-19889744)
chr5 (33-102)||(4300005-4300074)
chr5 (36-121)||(43067229-43067314)
chr5 (33-121)||(970138-970226)
chr5 (33-101)||(16048103-16048171)
chr5 (33-121)||(39405764-39405852)
chr5 (31-99)||(42421707-42421775)
chr5 (62-124)||(16954687-16954749)
chr5 (31-93)||(19868856-19868918)
chr5 (33-102)||(22613882-22613951)
chr5 (38-99)||(25563522-25563583)
chr5 (36-99)||(19087946-19088009)
chr5 (86-123)||(35447995-35448032)
chr5 (76-121)||(37304361-37304406)
chr5 (86-123)||(42148533-42148570)
chr5 (86-122)||(970364-970400)
chr5 (86-122)||(4299832-4299868)
chr5 (33-93)||(15268138-15268198)
chr5 (86-122)||(22613708-22613744)
chr5 (86-122)||(29627494-29627530)
chr5 (86-125)||(5212918-5212957)
chr5 (33-92)||(21961256-21961315)
chr5 (31-121)||(2863954-2864044)
chr5 (33-102)||(32300589-32300658)
chr5 (86-122)||(16048311-16048347)
chr5 (86-122)||(32002013-32002049)
chr5 (86-122)||(32334637-32334673)
chr5 (86-122)||(43067447-43067483)
[»] scaffold0092 (1 HSPs)
scaffold0092 (31-121)||(44279-44369)
[»] scaffold0051 (1 HSPs)
scaffold0051 (31-121)||(41388-41478)
[»] scaffold0459 (1 HSPs)
scaffold0459 (31-121)||(12752-12842)
[»] scaffold0366 (2 HSPs)
scaffold0366 (31-121)||(10393-10483)
scaffold0366 (31-121)||(14059-14149)
[»] scaffold0027 (2 HSPs)
scaffold0027 (38-121)||(117321-117404)
scaffold0027 (86-124)||(117547-117585)
[»] scaffold0007 (2 HSPs)
scaffold0007 (31-121)||(15387-15477)
scaffold0007 (86-123)||(15214-15251)
[»] scaffold0340 (1 HSPs)
scaffold0340 (36-121)||(14345-14430)
[»] scaffold0111 (1 HSPs)
scaffold0111 (31-93)||(38531-38593)
[»] scaffold0294 (1 HSPs)
scaffold0294 (33-80)||(12619-12666)
[»] scaffold0018 (1 HSPs)
scaffold0018 (57-121)||(145756-145820)


Alignment Details
Target: chr1 (Bit Score: 151; Significance: 6e-80; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 120 - 278
Target Start/End: Complemental strand, 46730314 - 46730156
Alignment:
Q  120 tattactttgctagtgtacaaaaatttaaaacctaaagtctggttttttcatcttttctcccacgtacttagtttcttgtagaaatatgaaattcaccct 219  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46730314 tattactttgctagtgtacaaaaatttaaaaccaaaagtctggttttttcatcttttctcccacgtacttagtttcttgtagaaatatgaaattcaccct 46730215  T
Q  220 cctcctaagaacctagccgactgtatttggataaacaaatcttgaagggtgatacaaat 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46730214 cctcctaagaacctggccgactgtatttggataaacaaatcttgaagggtgatacaaat 46730156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 25531868 - 25531778
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25531868 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 25531778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 48219813 - 48219903
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48219813 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 48219903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 39354435 - 39354528
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39354435 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacgtagggagtatta 39354528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 50539350 - 50539258
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50539350 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtatt 50539258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 48264982 - 48265072
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48264982 agtagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 48265072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 52379079 - 52378989
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52379079 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 52378989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 32988522 - 32988610
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32988522 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagagacggagggagta 32988610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 50876454 - 50876364
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  50876454 agtagagaattgaagatatcaaagataaaacatatgcattggtatatgtgttagagtcaactaggtcatttatttagggacggagggagta 50876364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 38458819 - 38458729
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  38458819 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttattgagggacggaggaagta 38458729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 3529266 - 3529174
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  3529266 agtagagaattgaatatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagatcattaattaagggacggagggagtatt 3529174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 49805428 - 49805512
Alignment:
Q  36 agaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagt 120  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  49805428 agaattgaagatatcaaagataaaacatatgcattggtatgtttgtcagagtcaactagatcatttatttagggacggagggagt 49805512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 30529221 - 30529314
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||| ||||||| ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  30529221 agtagaaaattgaagatatctaagataaaacatatgcattggtacttgtgtcagagtcaactaggtcatttattgagggacggagggagtatta 30529314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 23569846 - 23569938
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||| |||||||||||||||||||    
T  23569846 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttattgagggacggagggagtatta 23569938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 32565836 - 32565745
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||| ||||| |||| | |||||||||||||||    
T  32565836 agtagagaattgaagatatcaaagagaaaacatatgcattggtacgtgtgtcagagtcaactaagtcatctattgaaggacggagggagtat 32565745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 42708594 - 42708504
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| | ||||| ||||||    
T  42708594 agtagagaattgaagatatcaaatataaaacatatgcattggtatgtgtgtcagagtcaactaaatcatttatttaagaacggaaggagta 42708504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 45235016 - 45235101
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagg 116  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||| || ||||||||    
T  45235016 agtaaagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaagtcacttattcagagacggagg 45235101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 47222304 - 47222212
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |  |||| ||||| ||||||    
T  47222304 agtaaagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcatttaatatgggatggaggaagtatt 47222212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 50481366 - 50481274
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattac 125  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||| || ||||||| ||||| || |  |||||||||||||||||||    
T  50481366 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggaatcaactaagtcatctaatatgggacggagggagtattac 50481274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 29161932 - 29161853
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaggga 110  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |||||    
T  29161932 agtagaaaattgaagatatcaaagataaaacatatgaattggtacgtgtgtcagagtcaactagatcatttattgaggga 29161853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 37281182 - 37281092
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||| |||||||||||| ||||||| |||||| ||||||||||||||||||||| |||| ||||||  ||||||||    
T  37281182 agtagagaattgaagatataaaagataaaacacatgcatttgtatgtttgtcagagtcaactaggtcatctattgagggacaaagggagta 37281092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 16266250 - 16266165
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggaggga 118  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||| |  ||||||||||||    
T  16266250 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggaggga 16266165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 16265121 - 16265033
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||| |  | |||||||||||||    
T  16265121 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgagacggagggagta 16265033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 26441725 - 26441637
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||| |  || ||||||||||||    
T  26441725 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatggaacggagggagta 26441637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 38738153 - 38738217
Alignment:
Q  35 gagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  38738153 gagaattgaacatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcat 38738217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 43680157 - 43680069
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| ||||||||||||||||||||||||||||| | |||||  |||||||||| ||||||| |  |||||||||||||||    
T  43680157 tagagaattgaagatatcaaagataaaacatatgcattggtacgcgtgtcgaagtcaactagatcatttaatatgggacggagggagta 43680069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 1849789 - 1849714
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattta 106  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||| ||| |||||||    
T  1849789 agtatagaattgaagatatcaaagataaaacatatgcattggtatatgtgttagagtcaactagatcacttattta 1849714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 16751627 - 16751714
Alignment:
Q  34 agagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| || |  || ||||||||||||    
T  16751627 agagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcatctaatatggaacggagggagta 16751714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 48376244 - 48376158
Alignment:
Q  35 gagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||| |||| | | || |||||||||    
T  48376244 gagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaagttaactaggtcatctattgaagaacagagggagta 48376158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 4605083 - 4605002
Alignment:
Q  36 agaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggaggg 117  Q
    |||||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||| |||| |||  ||||||||||||    
T  4605083 agaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactagatcatctatcgagggacggaggg 4605002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 31971558 - 31971631
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatt 104  Q
    |||||||| ||||| |||||||||||||||||||||||||||||  |||||||||||||||||| |||| ||||    
T  31971558 agtagagagttgaatatatcaaagataaaacatatgcattggtacatgtgtcagagtcaactagatcatctatt 31971631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 3898744 - 3898832
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||| ||||||| ||||||||||||||||||||||||||||| || ||||  |||||||||| ||||||| |  |||||||||||||||    
T  3898744 tagaaaattgaagatatcaaagataaaacatatgcattggtacgtctgtcgaagtcaactagatcatttaatatgggacggagggagta 3898832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 24982439 - 24982351
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| |||||||| |||||||||||||||||||| |||||||  |||||||||| ||||||| |  | |||||||||||||    
T  24982439 tagagaattgaagatatcaaatataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgagacggagggagta 24982351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 14075818 - 14075738
Alignment:
Q  38 aattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggaggga 118  Q
    ||||||| |||||||| |||||||||||||||||||||||||||| ||||||||| | |||| || |  ||||||||||||    
T  14075818 aattgaagatatcaaatataaaacatatgcattggtatgtgtgtcggagtcaactcgatcatctaatatgggacggaggga 14075738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 41501779 - 41501828
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtg 80  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  41501779 agtagagaattgaatatatcaaagataaaacatatgcattggtacgtgtg 41501828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 3898606 - 3898570
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  3898606 gtcaactaggtcatttattgagggacggagggagtat 3898570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 16265259 - 16265295
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  16265259 gtcaactaggtcatttattgagggacggagggagtat 16265295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 16266388 - 16266424
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  16266388 gtcaactaggtcatttattgagggacggagggagtat 16266424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 25532004 - 25532040
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  25532004 gtcaactaggtcatttattaagggacggagggagtat 25532040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 26441860 - 26441896
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  26441860 gtcaactaggtcatttattgagggacggagggagtat 26441896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 31698761 - 31698821
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaacta 93  Q
    |||| |||| || |||| |||||| ||| |||||||||| |||||||||||||||||||||    
T  31698761 tagataattaaatatattaaagattaaatatatgcattgatatgtgtgtcagagtcaacta 31698821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 43680296 - 43680332
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  43680296 gtcaactaggtcatttattgagggacggagggagtat 43680332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 48264846 - 48264810
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  48264846 gtcaactaggtcatttattaagggacggagggagtat 48264810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 124
Target Start/End: Complemental strand, 23569702 - 23569671
Alignment:
Q  93 aggtcatttatttagggacggagggagtatta 124  Q
    ||||||||||||||||||||||||||||||||    
T  23569702 aggtcatttatttagggacggagggagtatta 23569671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 30529085 - 30529050
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30529085 gtcaactaggtcatttattaagggacggagggagta 30529050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 39354299 - 39354264
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  39354299 gtcaactaggtcatttattaagggacggagggagta 39354264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Original strand, 50876590 - 50876625
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  50876590 gtcaactaggtcatttattaagggacggagggagta 50876625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 23330540 - 23330502
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattg 71  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  23330540 tagagaattgaagatatgaaagataaaacatatgcattg 23330502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 92
Target Start/End: Complemental strand, 43729804 - 43729774
Alignment:
Q  62 atatgcattggtatgtgtgtcagagtcaact 92  Q
    |||||||||||||||||||||||||||||||    
T  43729804 atatgcattggtatgtgtgtcagagtcaact 43729774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 52379215 - 52379253
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatta 124  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  52379215 gtcaactaggtcatttattaaaggacggagggagtatta 52379253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 45234884 - 45234847
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatt 123  Q
    ||||||||||||||||||| || |||||||||||||||    
T  45234884 gtcaactaggtcatttattaagagacggagggagtatt 45234847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 1929487 - 1929519
Alignment:
Q  92 taggtcatttatttagggacggagggagtatta 124  Q
    ||||||| |||||||||||||||||||||||||    
T  1929487 taggtcacttatttagggacggagggagtatta 1929519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 24982577 - 24982613
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||| |||||||||||| |||||||||||||||||    
T  24982577 gtcaacaaggtcatttattgagggacggagggagtat 24982613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 42708726 - 42708762
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  42708726 gtcaactaggtcatttattaagggacggatggagtat 42708762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 46212521 - 46212614
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46212521 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 46212614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 3901310 - 3901402
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3901310 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 3901402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 46803721 - 46803630
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46803721 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 46803630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 28166364 - 28166273
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28166364 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtat 28166273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 45198511 - 45198602
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45198511 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtat 45198602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 47579377 - 47579286
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  47579377 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaactaggtcatttatttagggacggagggagtat 47579286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 3442515 - 3442605
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3442515 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactatgtcatttatttagggacggagggagta 3442605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 21859090 - 21859180
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21859090 agtagagaattgaaaatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaggttatttatttagggacggagggagta 21859180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 21914953 - 21915043
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21914953 agtagagaattgaaaatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaggttatttatttagggacggagggagta 21915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 5735359 - 5735270
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5735359 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtat 5735270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 26205875 - 26205968
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  26205875 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaactagatcatttatttagggacggagggagtatta 26205968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 128
Target Start/End: Original strand, 5744256 - 5744351
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattacttt 128  Q
    |||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5744256 tagagaattgaagatatcaaagataaaacatatacattgatatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtactacttt 5744351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 4264222 - 4264134
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4264222 tagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattgagggacggagggagta 4264134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 28152081 - 28151993
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggag 119  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28152081 agtagagaattgaagatatcaaatataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaaggacggagggag 28151993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 6494678 - 6494588
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6494678 agtagagaattgaagatattaaagataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagggacggaggaagta 6494588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 37688204 - 37688289
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagg 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  37688204 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcatctagatcatttatttagggacggagg 37688289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 7738990 - 7739081
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  7738990 agtagagaattgaatatatcaaagataaaacatatgcattgatacgtgtgtcggagtcaactaggtcatttatttagggacggatggagtat 7739081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 18360144 - 18360234
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||    
T  18360144 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgcgtcagagtcaactaggtcatctattgagggacggagggagta 18360234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 36602784 - 36602694
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||    
T  36602784 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgcgtcagagtcaactaggtcatctattgagggacggagggagta 36602694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 39786527 - 39786617
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||||||||    
T  39786527 agtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagtcaactaggtcatctattgagggacggagggagta 39786617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 20678758 - 20678843
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagg 116  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||    
T  20678758 agtagagaattgaaaatatcaaagataaaatatatgcattgatatatgtgtcagagtcaactagatcatttatttagggacggagg 20678843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 49768535 - 49768447
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggag 119  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||    
T  49768535 agtagagaattgaagatatcaaagataaaacatatgcattgatatgtatgtcatagtcaactaagtcatttatttagggacggagggag 49768447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 4209453 - 4209363
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||| ||||||||||||||||    
T  4209453 agtagagaattgaagatatcaaagataaaacatatgtattggtacgtgtgtcagagtcaactagatcatctattgagggacggagggagta 4209363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 23256025 - 23255935
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||| |||||| ||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||    
T  23256025 agtagagaattgaagatatcaaatataaaatatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggagggagta 23255935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 55190887 - 55190977
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  55190887 tagataattgaagatatcaaagataaaacatatgcattggtaagtgtgtcagagtcaactaggtcatctattgagggacggaggaagtatt 55190977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 5123328 - 5123419
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| ||||| |||||||||||    
T  5123328 agtagataattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaagtcatctattgagggatggagggagtat 5123419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 1377122 - 1377032
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| | ||| | ||||||||    
T  1377122 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcatagtcaactacgtcatttattgaaggatgaagggagta 1377032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 50033110 - 50033016
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattac 125  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||| || |  ||||||||| |||||||||    
T  50033110 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaagtcatctaatatgggacggagagagtattac 50033016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 19634021 - 19634110
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||||||| |||| |||| ||||||| |||||||||    
T  19634021 tagagaattgaagatatcaaagataaaacatatgaattggtacgtgtgtcggagtcaactagatcatctattaagggacgaagggagtat 19634110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 19652427 - 19652523
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattacttt 128  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| || |||| ||||||||||| |||| |||| ||||||||||| |||||| ||||    
T  19652427 gtagagaattgaagatatcaaagataaaacatatgaattggtacgtatgtcggagtcaactagatcatatattgagggacggaggaagtatttcttt 19652523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 19525885 - 19525975
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||| |   ||||||||||||||    
T  19525885 agtaaagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggtcatttaatataggacggagggagta 19525975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 19731336 - 19731433
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattacttt 128  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| || |  || ||| |||||||| ||||||    
T  19731336 agtagagcattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcatctaatatggaacgaagggagtactacttt 19731433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 25644447 - 25644359
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||| |  ||||| |||||||||    
T  25644447 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacagagggagta 25644359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 39260302 - 39260392
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| ||||||||||||||| ||||| |||||||  |||||||||||||||||| |||| |||| |||||| ||||||||||    
T  39260302 agtagagaattgaagatatcaaagataaaatatatgtattggtacatgtgtcagagtcaactagatcatctattgagggac-gagggagtat 39260392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 19170711 - 19170801
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||| |||| |||||||||| |||||||||||||  ||||||  ||||||||||||||| |||| |||||||||| ||||||    
T  19170711 gtagagaattgaagatattaaagataaaatatatgcattggtacatgtgtcgaagtcaactaggtcatctattgagggacggagcgagtat 19170801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 50035629 - 50035535
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattac 125  Q
    |||||||||||||| || ||||||||||||||||||||||| || ||||||| ||||||||||| |||| || |  ||||||||| |||||||||    
T  50035629 agtagagaattgaagatttcaaagataaaacatatgcattgatacgtgtgtcggagtcaactagatcatctaatatgggacggagagagtattac 50035535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 53568444 - 53568374
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattt 101  Q
    |||| ||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  53568444 agtaaagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcggagtcaactaggacattt 53568374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 6923113 - 6923182
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattta 102  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||    
T  6923113 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcattta 6923182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 51737130 - 51737218
Alignment:
Q  37 gaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattac 125  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||| |||||||| |||| || || |  ||||||||| |||||||||    
T  51737130 gaattgaaaatataaaagataaaacatatgcattggtacgtgtgtcggagtcaacaaggttatctaatatgggacggagagagtattac 51737218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 3443558 - 3443617
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaa 90  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  3443558 agtagagaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcagagtcaa 3443617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 19631396 - 19631330
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| || |||||    
T  19631396 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaattaagtcat 19631330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 39195672 - 39195742
Alignment:
Q  51 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||| || | ||||||| ||||||||    
T  39195672 aaagataaaaaatatgcattgatatgtgtgtcagagtcaactaggtcatctaataagggacgaagggagta 39195742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 10181076 - 10181017
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 92  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||    
T  10181076 tagataattgaaaatattaaagataaaacatatgtattggtatgtgtgacagagtcaact 10181017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 23603825 - 23603880
Alignment:
Q  38 aattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaacta 93  Q
    ||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  23603825 aattgaagatatcaaagataaaacagatgcattggtacgtgtgtcagagtcaacta 23603880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 42187150 - 42187212
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaacta 93  Q
    ||||||||||| || ||||||||||||||| ||||||||||||| || |||||||||||||||    
T  42187150 agtagagaattaaagatatcaaagataaaatatatgcattggtacgtatgtcagagtcaacta 42187212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 55014345 - 55014287
Alignment:
Q  38 aattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggt 96  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  55014345 aattgaatatatcaaagataaaacatatgcattagtacgtgtgtcggagtcaactaggt 55014287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 14958078 - 14958030
Alignment:
Q  51 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||    
T  14958078 aaagatataaaatatgcattggtatgtgtgtcagagtcaactaggtcat 14958030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 55997202 - 55997146
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtca 89  Q
    |||||||||||| |||||||||||||||| |||||||||||| ||||||| ||||||    
T  55997202 tagagaattgaagatatcaaagataaaacgtatgcattggtacgtgtgtcggagtca 55997146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 50971549 - 50971491
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaa 90  Q
    ||||||||||| || |||||||| |||||||||||||||||||| |||||||||||||||    
T  50971549 agtagagaattaaatatatcaaa-ataaaacatatgcattggtacgtgtgtcagagtcaa 50971491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 26659928 - 26659862
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||||||||||| ||||||||| ||||||||||||| || ||  |||||| ||||||||||||||||    
T  26659928 tagagaattgaagatatcaaagctaaaacatatgcagtgatacatgtgtcggagtcaactaggtcat 26659862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 3442379 - 3442341
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatta 124  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  3442379 gtcaactaggtcatttattaagggacggagggagtatta 3442341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 31486361 - 31486308
Alignment:
Q  46 atatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||| ||| |||||| ||||||||| |||||||||| |||||||||||||||||    
T  31486361 atattaaaaataaaagatatgcattagtatgtgtgttagagtcaactaggtcat 31486308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 5735497 - 5735533
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5735497 gtcaactaggtcatttattaagggacggagggagtat 5735533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 45198375 - 45198339
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  45198375 gtcaactaggtcatttattaagggacggagggagtat 45198339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 47579512 - 47579548
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  47579512 gtcaactaggtcatttattaagggacggagggagtat 47579548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 7738854 - 7738819
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7738854 gtcaactaggtcatttattaagggacggagggagta 7738819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Original strand, 28152217 - 28152252
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  28152217 gtcaactaggtcatttattaagggacggagggagta 28152252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 39194000 - 39193941
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 92  Q
    ||||||||  || |||| |||||||||| |||||||||| ||| ||||||||||||||||    
T  39194000 tagagaatgaaagatattaaagataaaagatatgcattgatatatgtgtcagagtcaact 39193941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 10385074 - 10385111
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatt 123  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  10385074 gtcaactaggtcacttattaagggacggagggagtatt 10385111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 18360008 - 18359971
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  18360008 gtcaactaggtcatctattaagggacggagggagtatt 18359971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 36602920 - 36602957
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  36602920 gtcaactaggtcatctattaagggacggagggagtatt 36602957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 46803858 - 46803895
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatt 123  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  46803858 gtcaactaggtcatttattaagggacagagggagtatt 46803895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 4209585 - 4209621
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||| |||||||||||||||||    
T  4209585 gtcaactaggtcatctattaagggacggagggagtat 4209621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 4264360 - 4264396
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||| |||||||||| |||||||||||||||||    
T  4264360 gtcaactaagtcatttattaagggacggagggagtat 4264396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 121
Target Start/End: Complemental strand, 19170567 - 19170539
Alignment:
Q  93 aggtcatttatttagggacggagggagta 121  Q
    |||||||||||||||||||||||||||||    
T  19170567 aggtcatttatttagggacggagggagta 19170539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 118
Target Start/End: Complemental strand, 19525749 - 19525717
Alignment:
Q  86 gtcaactaggtcatttatttagggacggaggga 118  Q
    ||||||||||||||||||| |||||||||||||    
T  19525749 gtcaactaggtcatttattgagggacggaggga 19525717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 25644585 - 25644621
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| | |||||||||||||||    
T  25644585 gtcaactaggtcatttattgaaggacggagggagtat 25644621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 25678384 - 25678340
Alignment:
Q  51 aaagataaaacatatgcattggtatgtgtgtcagagtcaactagg 95  Q
    |||||||||| ||||| || |||||||||||||||||||| ||||    
T  25678384 aaagataaaagatatgtataggtatgtgtgtcagagtcaattagg 25678340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 26205739 - 26205703
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||| |||||||||| |||||||||||||||||    
T  26205739 gtcaactaagtcatttattaagggacggagggagtat 26205703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 27976744 - 27976780
Alignment:
Q  34 agagaattgaaaatatcaaagataaaacatatgcatt 70  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  27976744 agagaattgaagatattaaagataaaacatatgcatt 27976780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 50971654 - 50971694
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtattact 126  Q
    |||||||||||||| |||| |||||||||||||||| ||||    
T  50971654 gtcaactaggtcatctattaagggacggagggagtagtact 50971694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 51736882 - 51736822
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaacta 93  Q
    |||| |||| || |||| |||||| ||| |||||||||  |||||||||||||||||||||    
T  51736882 tagataattaaacatattaaagatcaaatatatgcattaatatgtgtgtcagagtcaacta 51736822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 43137941 - 43137848
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43137941 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtatta 43137848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 7459991 - 7460081
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7459991 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggaggaagta 7460081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 18659140 - 18659051
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18659140 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtat 18659051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 8559176 - 8559267
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8559176 agtagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggatggagtat 8559267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 37832990 - 37832900
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37832990 agtagagaattgaagatatcaaaaataaaacatatgcattggtatgtgtgtcagagtcaactatgtcatttatttagggacggagggagta 37832900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 54840304 - 54840389
Alignment:
Q  36 agaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54840304 agaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggatggagggagta 54840389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 1327401 - 1327310
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||    
T  1327401 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtaagagtcaactagatcatttatttagggacggagggagtat 1327310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 38833754 - 38833671
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacgga 114  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38833754 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacgga 38833671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 52668660 - 52668746
Alignment:
Q  35 gagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  52668660 gagaattgaaaatatcaaagataaaatatatgcattgatatgtgtgtcagagccaactaggtcatttatttagggacggagggagta 52668746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 10571315 - 10571408
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||    
T  10571315 agtagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaggtcatttatcgagggacggagggactatta 10571408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 51062480 - 51062399
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacg 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  51062480 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacg 51062399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 51392463 - 51392548
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagg 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  51392463 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaactaggtcatttatttagggacagagg 51392548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 21907084 - 21906996
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  21907084 tagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttattgagggacggagggagta 21906996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 34827409 - 34827321
Alignment:
Q  34 agagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||    
T  34827409 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagtat 34827321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 45167387 - 45167299
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  45167387 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaagaacggatggagta 45167299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 46483641 - 46483550
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |||||||    
T  46483641 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggatggagtat 46483550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 38492142 - 38492052
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  38492142 agtagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 38492052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 27849042 - 27848952
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || | ||||||||||||||||    
T  27849042 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcaaagtcaactaggtcatctaatgagggacggagggagta 27848952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 29728269 - 29728359
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||| ||||||| ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  29728269 agtagaaaattgaagatatctaagataaaacatatgcattggtacttgtgtcagagtcaactaggtcatttattgagggacggagggagta 29728359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 48707014 - 48707104
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||  ||| ||||||||||||||||||||||    
T  48707014 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagaatcaactaaatcacttatttagggacggagggagta 48707104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 49057945 - 49057856
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||||| ||||    
T  49057945 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggtcatttattgagggacggaggaagta 49057856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 25097358 - 25097448
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| |||| ||| ||||||||||||    
T  25097358 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgttagagtcaactaagtcatctattgaggtacggagggagta 25097448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 53066462 - 53066374
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||||    
T  53066462 tagataattgaagatatcaaagataaaacatatgcattggtaagtgtgtcagagtcaacta-gtcatctattgagggacggagggagtat 53066374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 28690606 - 28690515
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |  | ||||||||||||||    
T  28690606 agtagagcattgaagatatcaaagataaaacatatgcattggtatgtgtgtcggagtcaactaggtcatctaatatgtgacggagggagtat 28690515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 15503113 - 15503023
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||| |||||||||||||||||||||||||| || || |||| ||||||| |||||||| |||| ||||||||||||||||||    
T  15503113 tagagaattgaatatatcaaagataaaacatatgcattgatacgtatgtcggagtcaattaggtcatctattgagggacggagggagtatt 15503023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 3547591 - 3547684
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||| ||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |||||||| || |  ||||||||||||||||||    
T  3547591 agtagataattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaattaggtcatctaatatgggacggagggagtatta 3547684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 32951309 - 32951397
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||  |||||||||| ||||||| |  |||||||||||||||    
T  32951309 tagagaattgaagataccaaagataaaacatatgcattggtatgtgtgtcgaagtcaactagatcatttaatatgggacggagggagta 32951397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 32285347 - 32285426
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaggga 110  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||| |||||    
T  32285347 agtagagaattgaagatatcaaagataaaacatatgtattggtacgtgtgtcagagtcaactaggtcgtctattgaggga 32285426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 45093807 - 45093748
Alignment:
Q  34 agagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaacta 93  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45093807 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaacta 45093748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 4238793 - 4238881
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| |||| |||||||||||||||||||||||| |||||||  |||||||||| ||||||| |  || ||||||||||||    
T  4238793 tagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatggaacggagggagta 4238881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 9145592 - 9145524
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||||| |||| || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  9145592 agtagaaaattcaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcat 9145524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 17052952 - 17052864
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||| ||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||| |  | |||||||||||||    
T  17052952 tagaaaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgagacggagggagta 17052864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 35718026 - 35718088
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaacta 93  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  35718026 agtagaaaattgaagatatcaaggataaaacatatgcattggtacgtgtgtcagagtcaacta 35718088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 10435222 - 10435153
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattta 102  Q
    |||||||||||| |||| |||||||||||||||||||||||| |||||||  |||||||||| |||||||    
T  10435222 tagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcattta 10435153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 47638145 - 47638060
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagg 116  Q
    |||||||||||||| |||| |||||||||||||||||||||||| |||| ||||| |||| || ||||| |||| || ||||||||    
T  47638145 agtagagaattgaagatattaaagataaaacatatgcattggtacgtgtatcagaatcaattaagtcatctattgagtgacggagg 47638060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 10437372 - 10437304
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||| ||||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||| |||||    
T  10437372 agtaaagaattgaagatatcaaagataaaacatataaattggtacgtgtgtcagagtcaactaagtcat 10437304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 39435208 - 39435296
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||| |||| ||||||| | |||||||| ||||| |||||||| ||||||||| ||||||||||||| || | ||||||||||||||||    
T  39435208 tagataattaaaaatattacagataaaaaatatgtattggtatatgtgtcagaatcaactaggtcatctaataagggacggagggagta 39435296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 7671484 - 7671552
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||||||||||||| |||||||||||||||||||||||||| ||  || ||| || |||||||||||||    
T  7671484 agtagagaattgaagatatcaaagataaaacatatgcattgatacatgcgtctgaatcaactaggtcat 7671552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 48143854 - 48143784
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattta 102  Q
    |||| |||||||||| ||||||||||||| |||||| ||||||||| ||||| ||||||||||| |||||||    
T  48143854 agtacagaattgaaa-tatcaaagataaaccatatgtattggtatgagtgtcggagtcaactagatcattta 48143784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 36665107 - 36665041
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    ||||||| |||| ||||||||||||||||||||||||||||| |||| || ||||||| || |||||    
T  36665107 tagagaaatgaagatatcaaagataaaacatatgcattggtacgtgtatcggagtcaattaagtcat 36665041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 10435345 - 10435381
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  10435345 gtcaactaggtcatttattgagggacggagggagtat 10435381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 16365449 - 16365509
Alignment:
Q  62 atatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||| ||||||||||||||||||| || | |||| |||||| ||| ||||||    
T  16365449 atatgcattggtacgtgtgtcagagtcaactagatcgtctattgagggacagagagagtat 16365509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 18659278 - 18659314
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  18659278 gtcaactaggtcatttattaagggacggagggagtat 18659314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 52550797 - 52550877
Alignment:
Q  41 tgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||| ||||| ||||||||||||||||||| ||| || |||| |||||||||| ||||| || |  ||||||||| |||||    
T  52550797 tgaagatatcgaagataaaacatatgcattagtacgtatgtcggagtcaactaagtcatctaatatgggacggagagagta 52550877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 7459855 - 7459820
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7459855 gtcaactaggtcatttattaagggacggagggagta 7459820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 8559040 - 8559005
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8559040 gtcaactaggtcatttattaagggacggagggagta 8559005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Original strand, 34827479 - 34827514
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  34827479 gtcaactaggtcatttattaagggacggagggagta 34827514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 124
Target Start/End: Original strand, 37833129 - 37833164
Alignment:
Q  89 aactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||||| |||||||||||||||||||    
T  37833129 aactaggtcatttattaagggacggagggagtatta 37833164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 29728133 - 29728095
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatta 124  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  29728133 gtcaactagatcatttattaagggacggagggagtatta 29728095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 38833889 - 38833927
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatta 124  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  38833889 gtcaactgggtcatttattaagggacggagggagtatta 38833927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 4238529 - 4238493
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||| |||||||||| |||||||||||||||||    
T  4238529 gtcaactaagtcatttattgagggacggagggagtat 4238493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 32951171 - 32951135
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  32951171 gtcaactagatcatttattgagggacggagggagtat 32951135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 52668521 - 52668485
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  52668521 gtcaactaggtgatttattaagggacggagggagtat 52668485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 124
Target Start/End: Original strand, 54674014 - 54674042
Alignment:
Q  96 tcatttatttagggacggagggagtatta 124  Q
    |||||||||||||||||||||||||||||    
T  54674014 tcatttatttagggacggagggagtatta 54674042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 54840163 - 54840127
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  54840163 gtcaactgggtcatttattaagggacggagggagtat 54840127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 14372167 - 14372076
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14372167 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 14372076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 23671466 - 23671375
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23671466 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 23671375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 42038613 - 42038520
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42038613 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagtatta 42038520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 40425420 - 40425512
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40425420 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttatttagggacggagggagtatt 40425512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 18718329 - 18718238
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18718329 agtagagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 18718238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 34827000 - 34826911
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34827000 tagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 34826911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 14707705 - 14707792
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggaggga 118  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14707705 agtaaagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggaggga 14707792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 41172928 - 41173019
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41172928 agtagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaagtaggtcatttatttagggacggagggagtat 41173019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 3987403 - 3987493
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3987403 agtagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 3987493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 20517509 - 20517416
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||    
T  20517509 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaattatgtcatttatttagagacggagggagtatta 20517416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 27559663 - 27559568
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattacttt 128  Q
    |||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  27559663 tagagaattgaagatatcaaagataaaacatatacattgatatgtgtgtcagagtcaactagatcatttatttagggacggagggagtactacttt 27559568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 4045406 - 4045496
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  4045406 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaaccaaatcatttatttagggacggagggagtatt 4045496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 7443062 - 7443152
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  7443062 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 7443152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 16941982 - 16942072
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||    
T  16941982 agtagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagcgacggaggaagta 16942072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 17012647 - 17012737
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||    
T  17012647 agtagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagcgacggaggaagta 17012737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 44283450 - 44283540
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  44283450 agtagagaattgaagatatcaaagataaaatatatgcattggtatgtgtgtcagaatcaactaggtcatttatttaaggacggagggagta 44283540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 41463688 - 41463777
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagt 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||    
T  41463688 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcatttattgagggacggagggagt 41463777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 44330472 - 44330384
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  44330472 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaagaacggaaggagta 44330384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 30708818 - 30708727
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| || ||||||||||||||    
T  30708818 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaagtcaactaggtcacttattcagagacggagggagtat 30708727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 32776072 - 32776162
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| || |||||||||||||||| |||| |||||||||||||||||    
T  32776072 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcggagtcaactaggtcatctattaagggacggagggagtat 32776162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 38588075 - 38588143
Alignment:
Q  46 atatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacgga 114  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  38588075 atatcaaagataaaacatatgcattggtatgtgtatcagagtcaactagatcatttatttagggacgga 38588143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 9877254 - 9877345
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||| || |||||||||||||||||||||||||   | |||||||||||||||||||||||| |||| |||||||||||||||||    
T  9877254 agtagagaattaaagatatcaaagataaaacatatgcattcacacgtgtgtcagagtcaactaggtcatctattgagggacggagggagtat 9877345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 36199122 - 36199197
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattta 106  Q
    |||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  36199122 agtagagaatcgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactagatcatttattta 36199197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 40598216 - 40598128
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||| |  |||||||||||||||    
T  40598216 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggagggagta 40598128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 38963608 - 38963518
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||| | ||||||||||||||||||||||||||| |||||||  ||| ||||||||||| |||| ||| |||||||||||||    
T  38963608 gtagagaattgaagaaatcaaagataaaacatatgcattggtacgtgtgtcgaagttaactaggtcatctattaaggaacggagggagtat 38963518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 5030462 - 5030535
Alignment:
Q  51 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||| |||| | ||||||| | |||||||    
T  5030462 aaagataaaaaatatgcattggtatgtgtgtcaaagtcaactaggtcatctattaacggacggatgaagtatta 5030535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 24283129 - 24283210
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacg 112  Q
    |||||||||||||| ||||||||||||||||||||||||  ||| ||||||| ||  |||||||||||| |||| |||||||    
T  24283129 agtagagaattgaagatatcaaagataaaacatatgcatcagtacgtgtgtcggaaacaactaggtcatctattgagggacg 24283210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 38137701 - 38137769
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||||    
T  38137701 agtagggaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcggagtcaactagatcat 38137769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 40898730 - 40898662
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||||||||||||| |||||||||||||||||||| |||| ||| ||||||| ||||||||||| ||||    
T  40898730 agtagagaattgaagatatcaaagataaaacatatacattagtacgtgtgtcggagtcaactagatcat 40898662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 332366 - 332278
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||||||||||||||||| ||||||   ||||| ||||||| |||||||| || |  |||||||||||||||    
T  332366 agtagagaattgaagatatcaaagataaaacatatgcgttggta--cgtgtcggagtcaaataggtcatctaatatgggacggagggagta 332278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 4045940 - 4045849
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||| |||| || ||||||||||||||||||||||||| ||| || ||||||| |||||||  |||| |||| ||| | |||||||||||    
T  4045940 agtagaaaattaaagatatcaaagataaaacatatgcattagtacgtatgtcagaatcaactaaatcatctattgaggaatggagggagtat 4045849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 4083292 - 4083229
Alignment:
Q  36 agaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||||| || |||| ||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  4083292 agaattaaagatattaaagataaaacatatgcattgatatgtgtgtcggagtcaactagctcat 4083229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 39418191 - 39418281
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||| ||||||| ||||||||||||||| ||||| ||||||| |||||||  |||||||||| |||| | || ||| | ||||||||||    
T  39418191 agtagataattgaagatatcaaagataaaatatatgtattggtaagtgtgtcgaagtcaactagatcatctgttgaggaaaggagggagta 39418281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 30776364 - 30776405
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattgg 72  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  30776364 agtagagaattgaagatatcaaagataaaacatatgcattgg 30776405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 13399276 - 13399344
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||||||||||||| |||| ||| ||||||| ||||||||||||  ||| ||||||||||||| |||||    
T  13399276 agtagagaattgaagatataaaaaataaaacgtatgcattggtacatgtatcagagtcaactaagtcat 13399344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 42951430 - 42951362
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||| ||||| |||||||||||| ||||||||||| ||||| || ||||||| ||||||||||| ||||    
T  42951430 agtaaagaatagaaaatatcaaaaataaaacatatacattgatacgtgtgtcggagtcaactagatcat 42951362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 43925254 - 43925291
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcatt 70  Q
    |||||||||||| |||||||||||||||||||||||||    
T  43925254 tagagaattgaagatatcaaagataaaacatatgcatt 43925291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 3987267 - 3987227
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtattact 126  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  3987267 gtcaactaagtcatttattaagggacggagggagtattact 3987227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 18718465 - 18718501
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  18718465 gtcaactaggtcatttattaagggacggagggagtat 18718501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 23671602 - 23671638
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  23671602 gtcaactaggtcatttattaagggacggagggagtat 23671638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 14707570 - 14707535
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  14707570 gtcaactaggtcatttattaagggacggagggagta 14707535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 40425284 - 40425249
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  40425284 gtcaactaggtcatttattaagggacggagggagta 40425249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 7442926 - 7442888
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatta 124  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  7442926 gtcaactagatcatttattaagggacggagggagtatta 7442888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 121
Target Start/End: Complemental strand, 20917763 - 20917729
Alignment:
Q  87 tcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||||||| ||||||||||||||||    
T  20917763 tcaactaggtcatttattaagggacggagggagta 20917729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 25786651 - 25786581
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaaca-tatgcattggtatgtgtgtcagagtcaactaggtcattta 102  Q
    |||||||||||| |||| || ||||||| | |||||||||||||||| | |||||||||||  ||||||||    
T  25786651 tagagaattgaagatattaaggataaaaaaatatgcattggtatgtgggacagagtcaactgtgtcattta 25786581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 14372303 - 14372340
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatt 123  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  14372303 gtcaattaggtcatttattaagggacggagggagtatt 14372340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 119
Target Start/End: Complemental strand, 44283314 - 44283281
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggag 119  Q
    ||||||||||||||||||| ||||||||||||||    
T  44283314 gtcaactaggtcatttattaagggacggagggag 44283281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 34827138 - 34827174
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  34827138 gtcaactgggtcatttattaagggacggagggagtat 34827174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 29791032 - 29790942
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29791032 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 29790942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 38845288 - 38845198
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38845288 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 38845198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 40013741 - 40013648
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40013741 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattaagggacggagggagtatta 40013648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 30290014 - 30289923
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30290014 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaactaggtcatttatttagggacggagggagtat 30289923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 45081902 - 45081812
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45081902 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggttatttatttagggacggagggagta 45081812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 2805647 - 2805740
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  2805647 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaactgggtcatttatttagggacggagggagtatta 2805740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 3293273 - 3293365
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  3293273 agtagagaattgaagatatcaaagataaaacatatgcattggtatatgtgtcagagtcaactagatcatttatttagggacggagggagtatt 3293365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 43066217 - 43066127
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43066217 agtaaagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggaggtagta 43066127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 37709987 - 37709898
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37709987 tagagaattgaagatatcaaagataaaacatatacattggtatgtgtgttagagtcaactaggtcatttatttagggacggagggagtat 37709898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 30380620 - 30380528
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  30380620 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaattagatcacttatttagggacggagggagtatt 30380528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 38739745 - 38739657
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38739745 tagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaaggacggagggagta 38739657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 13138303 - 13138393
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||    
T  13138303 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatttattgagggacagagggagta 13138393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 8351051 - 8351142
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  8351051 agtagagaattgaagatatcaaagataaaacatatgcactggtacgtgtgtcagagtcaactagatcacttatttagggacggagggagtat 8351142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 1580936 - 1581026
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||    
T  1580936 agtagagaattgaagatatcaaagataaaatatatgcattgatacgtgtgtcagagtcaactaggtcatttattcagggacggagggagta 1581026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 2986428 - 2986336
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  2986428 agtagagaattgaagatatcaa-gataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttattcagagacggagggagtatta 2986336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 6470935 - 6470845
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| |||||||| |||||||    
T  6470935 agtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagtcaactaggtcatatattgagggacggtgggagta 6470845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 23248867 - 23248779
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggag 119  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||| ||| ||||||||    
T  23248867 agtagagaattgaatatatcaaagataaaacatatgcattgatatatgtgttagagtcaactaggtcatttatttaaggagggagggag 23248779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 39361215 - 39361128
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||   |||| ||||||||||||| |||||| |||||    
T  39361215 agtagagaattgaagatatcaaaaataaaacatatgcattggtatgtgtgtcagagt---ctagatcatttatttaggaacggagagagta 39361128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 45253839 - 45253746
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgt-gtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    ||||||||||||| |||||||| |||||||||||||||||||| |||| ||| ||||||||||| |||| |||| |||||| ||||||||||||    
T  45253839 gtagagaattgaagatatcaaaaataaaacatatgcattggtacgtgtcgtcggagtcaactagatcatctattaagggacagagggagtatta 45253746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 44123763 - 44123669
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattac 125  Q
    |||||||||||||| || ||||||||||||||||||||||| || ||||||| ||||||||||| |||| || |  ||||||||| |||||||||    
T  44123763 agtagagaattgaagatttcaaagataaaacatatgcattgatacgtgtgtcggagtcaactagatcatctaatatgggacggagagagtattac 44123669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 14522470 - 14522378
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||||| |||||||||||||||||||||||||| || |||||| | | |||||||| |||| |||| ||||| | ||||||||||    
T  14522470 agtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgttaaaatcaactagatcatctattgagggatgaagggagtatt 14522378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 18809364 - 18809276
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  | |||||||| ||||||| |  |||| ||||||||||    
T  18809364 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaactcaactagatcatttaatatgggatggagggagta 18809276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 886239 - 886306
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||||||||| || ||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  886239 gtagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaaccaggtcat 886306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 25256424 - 25256353
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattta 102  Q
    |||||||||||||| |||||||||||||||||| |||||||||||  ||||| ||||||||||| |||||||    
T  25256424 agtagagaattgaagatatcaaagataaaacatttgcattggtataagtgtcggagtcaactagatcattta 25256353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 12893621 - 12893559
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaacta 93  Q
    |||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||||||||    
T  12893621 agtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcggagtcaacta 12893559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 14847295 - 14847210
Alignment:
Q  36 agaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||| || ||||||||||||||||||||||||||||  ||||||| || ||||||||||||| |||  ||||||| ||||||||    
T  14847295 agaattaaagatatcaaagataaaacatatgcattggtgcgtgtgtcggaatcaactaggtcatctatcgagggacgtagggagta 14847210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 31127978 - 31128047
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattta 102  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||  |||||||    
T  31127978 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaaatcattta 31128047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 11854612 - 11854524
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| |||||||| |||||| ||||||||||||| |||||||  |||||||||| || |||| |  |||||||||||||||    
T  11854612 tagagaattgaagatatcaaaaataaaatatatgcattggtacgtgtgtcgaagtcaactagatcgtttaatatgggacggagggagta 11854524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 23764623 - 23764713
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatg-tgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||| |||||||| |||||||||||||||||||| | ||||||  |||||||||| | ||||||  |||||||||| |||||    
T  23764623 gtagagaattgaatatatcaaatataaaacatatgcattggtacgttgtgtcgaagtcaactagattatttatcgagggacggagagagta 23764713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 9302528 - 9302592
Alignment:
Q  35 gagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||||||||| |||||||||||||||||||| ||||  |||||||| ||||||||| ||||||||    
T  9302528 gagaattgaagatatcaaagataaaacatatacatttatatgtgtgccagagtcaattaggtcat 9302592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 10658068 - 10658000
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||||||||||||| |||||||||||||||||||||  ||||||  |||||| |||||||||| |||||    
T  10658068 agtagagaattgaagatatcaaagataaaacatatgtgttggtacatgtgtcggagtcaactaagtcat 10658000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 45082038 - 45082075
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatt 123  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  45082038 gtcaactaggtcatttattaagggacggagggagtatt 45082075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 2805511 - 2805475
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  2805511 gtcaactaggtcatttattaagggacggagggagtat 2805475  T

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Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 10536956 - 10537028
Alignment:
Q  46 atatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggaggga 118  Q
    |||| |||||||||| ||||| || ||||| ||||||||| |||| |||||||| || | |||||||||||||    
T  10536956 atattaaagataaaaaatatgaatcggtatatgtgtcagaatcaattaggtcatctaataagggacggaggga 10537028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 18809502 - 18809538
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  18809502 gtcaactaggtcatttattgagggacggagggagtat 18809538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 31127840 - 31127804
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  31127840 gtcaactaggtcatttattgagggacggagggagtat 31127804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 42785968 - 42785920
Alignment:
Q  51 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||||||||  |||||||||||||| |||||| ||||||||||||||||    
T  42785968 aaagataaataatatgcattggtatatgtgtctgagtcaactaggtcat 42785920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Original strand, 23249078 - 23249113
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23249078 gtcaactaggtcatttattaagggacggagggagta 23249113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 25173843 - 25173902
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 92  Q
    |||| ||||||| |||| |||||||||||||||| ||||||||| ||| |||| ||||||    
T  25173843 tagaaaattgaagatattaaagataaaacatatgtattggtatgcgtgacagaatcaact 25173902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Original strand, 30290150 - 30290185
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30290150 gtcaactaggtcatttattaagggacggagggagta 30290185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 8350915 - 8350877
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatta 124  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  8350915 gtcaactaggtcatttattaagggatggagggagtatta 8350877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 29708785 - 29708822
Alignment:
Q  84 gagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  29708785 gagtcaactaggtcacttattaagggacggagggagta 29708822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 29791168 - 29791205
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatt 123  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  29791168 gtcaactaggtcatttattaagggacgtagggagtatt 29791205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 123
Target Start/End: Original strand, 43066356 - 43066389
Alignment:
Q  90 actaggtcatttatttagggacggagggagtatt 123  Q
    ||||||||||||||| ||||||||||||||||||    
T  43066356 actaggtcatttattaagggacggagggagtatt 43066389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 36819786 - 36819696
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36819786 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 36819696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 19072859 - 19072769
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19072859 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttatttagggacggagggagta 19072769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 42086809 - 42086899
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42086809 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggatggagggagta 42086899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 44479891 - 44479983
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  44479891 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggaggaagtatt 44479983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 2400375 - 2400284
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2400375 agtagagaatggaagatatcaaagataaaacatatgcattggtatatgtgtcagagtcaactaggtcatttatttagggacggagggagtat 2400284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 28185579 - 28185670
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28185579 agtagagaattaaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 28185670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 37951116 - 37951207
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  37951116 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgcgtcagagtcaactaggtcatttatttatggacggagggagtat 37951207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 47081070 - 47080980
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47081070 agtagagaatttaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattcatttagggacggagggagta 47080980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 47713673 - 47713763
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47713673 agtagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 47713763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 32619113 - 32619204
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32619113 agtagagaattgaagatatcaaaaataaaacatatgcattgatatgtgtgtcagagtcaactaagtcatttatttagggacggagggagtat 32619204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 36859379 - 36859470
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  36859379 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgttagagtcaattaggtcatttatttaggaacggagggagtat 36859470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 31466529 - 31466619
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  31466529 agtatagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 31466619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 36905616 - 36905526
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  36905616 agtagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaactaaatcatttatttagggacggagggagta 36905526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 23474140 - 23474230
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  23474140 agtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagtcaactaggtcacttatttagggacggaaggagta 23474230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 31110712 - 31110625
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagt 120  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||||    
T  31110712 agtagagaattgaaaatatcaaagataaaacatatgcattgagatgtgt--cagagtcaactaggtcatttatttagggacggagggagt 31110625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 4612263 - 4612349
Alignment:
Q  36 agaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||| |||||||| |||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||    
T  4612263 agaattgaagatatcaaacataaaatatatgcattggtatttgtgtcagagtcaactgggtcatttatttagggacgtagggagtat 4612349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 42834463 - 42834553
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||||||| ||| |||||| |||||||||||||||| |||||||||||||    
T  42834463 agtaaagaattgaagatatcaaagataaaacatatacattggtatgtgtatcaaagtcaaataggtcatttatttagagacggagggagta 42834553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 47713774 - 47713840
Alignment:
Q  55 ataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47713774 ataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 47713840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 21392108 - 21392018
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| | |||| |||||||||    
T  21392108 agtagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagatcatctattgaaggacagagggagta 21392018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 34478182 - 34478272
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||| ||||| |  |||||||||||||||    
T  34478182 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggttatttaatatgggacggagggagta 34478272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 10464288 - 10464376
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||  ||||||| |  |||||||||||||||    
T  10464288 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcaaagtcaactatatcatttaatatgggacggagggagta 10464376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 37231737 - 37231825
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||| |  |||||||||||||||    
T  37231737 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggagggagta 37231825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 48531412 - 48531319
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||| ||||||||||||||| |||||||||| || ||||||||||||||||||  |||| |||| ||| |||||||| ||||||    
T  48531412 agtagagaattgaagatatcaaagataaaatatatgcattgatacgtgtgtcagagtcaactaaatcatctattgaggaacggagggggtatta 48531319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 35500920 - 35501008
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  ||| |||||| ||||||| |  |||||||||||||||    
T  35500920 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagttaactagatcatttaatatgggacggagggagta 35501008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 47538013 - 47537932
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacg 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || | ||||| |||| ||| ||||||||| |||||||    
T  47538013 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtatatcagaatcaattagatcatttattgagggacg 47537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 31497874 - 31497964
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||| ||||||| ||||||||||||||||||||| ||| ||||||||||| ||||||||||||| || || |  ||||| |||||||||    
T  31497874 agtagataattgaagatatcaaagataaaacatatgtattagtatgtgtgtcggagtcaactaggttatctaatatgggaccgagggagta 31497964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 36643250 - 36643181
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattta 102  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||| ||| |||||||    
T  36643250 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaattagatcattta 36643181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 4033379 - 4033297
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggag 115  Q
    |||| |||| || |||| |||||||||| |||||||||| |||||||||||||||||||||| |||| || | ||||||||||    
T  4033379 tagataattaaatatattaaagataaaaaatatgcattgatatgtgtgtcagagtcaactagatcatctaataagggacggag 4033297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 38198556 - 38198503
Alignment:
Q  46 atatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||| |||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  38198556 atattaaagataaaaaatatgcattgatatgtgtatcagagtcaactaggtcat 38198503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 33613286 - 33613238
Alignment:
Q  51 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  33613286 aaagttaaaacatatgcattggtatgcgtgtcggagtcaactaggtcat 33613238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 39982287 - 39982341
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagt 87  Q
    |||||||||||| |||| ||||||||||||||||||||  |||||||| ||||||    
T  39982287 tagagaattgaagatattaaagataaaacatatgcattattatgtgtgacagagt 39982341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 40348498 - 40348409
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||| |||| || |||| |||||||||| |||||||||| |||| ||||| |||||||||| || || || |  ||||||||||||||||    
T  40348498 tagataattaaatatattaaagataaaaaatatgcattgatatgagtgtctgagtcaactacgttatctaatatgggacggagggagtat 40348409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 42493806 - 42493891
Alignment:
Q  36 agaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||| || |||| |||||||||| |||| ||||| |||||||| |||||||||||  |||||||| |  ||||| |||||||||    
T  42493806 agaattaaagatattaaagataaaaaatatacattgatatgtgtgacagagtcaactgtgtcatttaatatgggacagagggagta 42493891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 10464150 - 10464114
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  10464150 gtcaactaggtcatttattgagggacggagggagtat 10464114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 27916684 - 27916616
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||||| ||||||| |||||||| ||||||||||| ||||||||  |||||  || |||||||||||||    
T  27916684 agtagataattgaagatatcaaaaataaaacatatacattggtacatgtgttggactcaactaggtcat 27916616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 36643965 - 36644001
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  36643965 gtcaactaggtcatttattgagggacggagggagtat 36644001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 37950980 - 37950944
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  37950980 gtcaactaggtcatttattaagggacggagggagtat 37950944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 18795311 - 18795362
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtc 82  Q
    ||||||||||| || |||||||||||||||||||| |||| ||| |||||||    
T  18795311 agtagagaatttaagatatcaaagataaaacatatacattagtacgtgtgtc 18795362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 31466393 - 31466358
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  31466393 gtcaactaggtcatttattaagggacggagggagta 31466358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 34478043 - 34478008
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  34478043 gtcaactaggtcatttattgagggacggagggagta 34478008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Original strand, 36819922 - 36819957
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  36819922 gtcaactaggtcatttattaagggacggagggagta 36819957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Original strand, 36905752 - 36905787
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||| ||||||||||||||||||||||||||||    
T  36905752 gtcaactgggtcatttatttagggacggagggagta 36905787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Original strand, 47081206 - 47081241
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  47081206 gtcaactaggtcatttattaagggacggagggagta 47081241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 19072995 - 19073033
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatta 124  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  19072995 gtcaactgggtcatttattaagggacggagggagtatta 19073033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 47841253 - 47841291
Alignment:
Q  51 aaagataaaacatatgcattggtatgtgtgtcagagtca 89  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  47841253 aaagataaaaaatatgcattggtatatgtgtcagagtca 47841291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 2450777 - 2450712
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaa-catatgcattggtatgtgtgtcagagtcaactaggtc 97  Q
    |||||||||||| |||| |||||||||| ||||||||||||||   ||||| |||| |||||||||    
T  2450777 tagagaattgaagatattaaagataaaaacatatgcattggtacaggtgtcggagtaaactaggtc 2450712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 31110851 - 31110887
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||| | |||||||||||||||||||||||||||    
T  31110851 gtcaactggatcatttatttagggacggagggagtat 31110887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 35500782 - 35500746
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  35500782 gtcaactaggtcaattattgagggacggagggagtat 35500746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 37231598 - 37231562
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||| |||||| |||||||||||||||||    
T  37231598 gtcaactaggtcgtttattgagggacggagggagtat 37231562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 48531548 - 48531584
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||| |||||||||||||||||    
T  48531548 gtcaactaggtcatctattaagggacggagggagtat 48531584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 643602 - 643692
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  643602 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 643692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 24150831 - 24150739
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  24150831 agtagagaattgaagatatcaaagataaaatatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaggaacggatggagtatt 24150739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 31854906 - 31854818
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  31854906 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtatcagagtcaactgggtcatttatttagggacggagggagta 31854818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 11114655 - 11114565
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  11114655 agtagagaatcgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttattgagggacggagggagta 11114565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 22020364 - 22020276
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  22020364 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaagaacggaaggagta 22020276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 25435501 - 25435404
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattactttg 129  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| ||||||||||||||| ||||    
T  25435501 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtca-agtcaactagatcatttattgaggaacggagggagtattattttg 25435404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 33121631 - 33121542
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||| ||||||||||||||||    
T  33121631 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggtcatttattaagggacggagggagta 33121542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 8796140 - 8796050
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  8796140 agtagagaattaaagatatcaaagataaaacatatacattggtatgtgtgtcagagtcaactagatgatttatttagggacggagtgagta 8796050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 18991994 - 18991904
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||| ||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  18991994 agtagaaaattgaagatatcaaaaataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 18991904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 29403734 - 29403644
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| | |||||||| |||||    
T  29403734 agtagagaattgaagatatcaaagataaaacatacgcattggtatgtgtgtcagagtcaactaagtcatttattaaaggacggagagagta 29403644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 30237256 - 30237158
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaa-catatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattacttt 128  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  30237256 agtagagaatcgaagatatcaaagataaaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggagggagtactacttt 30237158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 20662230 - 20662321
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattt-agggacggagggagta 121  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||    
T  20662230 agtagagaattgaagatattaaagataaaacatatgcattggtatgtatgtcagaggcaactaggtcatttatttgagggacggaggaagta 20662321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 7098044 - 7098130
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    ||||||||||||||||||||    
T  7098044 agtagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatc----atttagggacggagggagta 7098130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 29986329 - 29986394
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggt 96  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29986329 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggt 29986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 13207125 - 13207192
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13207125 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcat 13207192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 25163251 - 25163183
Alignment:
Q  34 agagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattta 102  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||  | |||||||| |||||||    
T  25163251 agagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaaatcaactagatcattta 25163183  T

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Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 16434701 - 16434789
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||| |||| || |||| |||||||| | ||||||||||||||| ||||| ||||||||||| |||| || |  |||||||||||||||    
T  16434701 tagataattaaagatattaaagataagaaatatgcattggtatgagtgtctgagtcaactagttcatctaatatgggacggagggagta 16434789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 19068939 - 19069007
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    ||||||||| |||| ||||||||||||||| ||||| ||||||| |||| || |||| ||||| |||||    
T  19068939 agtagagaactgaagatatcaaagataaaatatatgtattggtacgtgtatcggagttaactaagtcat 19069007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 20662094 - 20662059
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20662094 gtcaactaggtcatttattaagggacggagggagta 20662059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 29979059 - 29979024
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||||||||| ||||||||||||||||    
T  29979059 gtcaactaggtcatttattaagggacggagggagta 29979024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 8796275 - 8796313
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatta 124  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  8796275 gtcaactgggtcatttattaagggacggagggagtatta 8796313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 16696051 - 16696010
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtattactt 127  Q
    |||||||||||||| |||| ||||||||||||||||| ||||    
T  16696051 gtcaactaggtcatctattgagggacggagggagtataactt 16696010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 643466 - 643430
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||  ||||||||||||||||||||||||||||    
T  643466 gtcaactgagtcatttatttagggacggagggagtat 643430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 25163390 - 25163426
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||| |||||||||| |||||||||||||||||    
T  25163390 gtcaactatgtcatttattgagggacggagggagtat 25163426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 1e-41; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 35448168 - 35448258
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35448168 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 35448258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 29627358 - 29627266
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29627358 agtagagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 29627266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 38698053 - 38697961
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38698053 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaattaggtcatttatttagggacggagggagtatt 38697961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 23988669 - 23988579
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23988669 agtagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 23988579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 40512851 - 40512941
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40512851 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 40512941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 42148397 - 42148307
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42148397 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 42148307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 5364510 - 5364421
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagt 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5364510 agtagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagt 5364421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 32334815 - 32334901
Alignment:
Q  35 gagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32334815 gagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacagagggagta 32334901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 39894871 - 39894778
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||    
T  39894871 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaactagatcacttatttagggacggagggagtatta 39894778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 5213093 - 5213186
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  5213093 agtagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagtatta 5213186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 32002185 - 32002278
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| |||||||||||||||||    
T  32002185 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaagtagatcatttatttaaggacggagggagtatta 32002278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 4925009 - 4925100
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||    
T  4925009 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagggtcaactaggtcatctattgagggacggagggagtat 4925100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 35290376 - 35290285
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||    
T  35290376 agtagagaattgaagatatcaaagataaaatatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggagggagtat 35290285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 37516234 - 37516144
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||||    
T  37516234 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactagatcatctattgagggacggagggagta 37516144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 37843747 - 37843839
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    ||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||| || ||||||||    
T  37843747 gtagagaattgaagatatcaaatataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacgaagagagtatta 37843839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 39036500 - 39036409
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtat 122  Q
    |||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| ||||| |||| || ||||||||||||||    
T  39036500 agtagagaattgaagatatcaaagataaaacatatacattggtacgtgtgtcagagtcaactatgtcatctattgagagacggagggagtat 39036409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 41411330 - 41411419
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||  ||||||||| ||||| |||| ||||||||||||||||    
T  41411330 gtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactaagtcatctattgagggacggagggagta 41411419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 14475406 - 14475488
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacgga 114  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| |||| |||||||||    
T  14475406 gtagagaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcggagtcaactaggtcatctattaagggacgga 14475488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 1830743 - 1830654
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||| |||||||||||||||||||||||||||||  ||||||  ||||||||| ||||| |||| ||||||||||||||||    
T  1830743 gtagagaattgaagatatcaaagataaaacatatgcattggtacatgtgtcgaagtcaactaagtcatctattgagggacggagggagta 1830654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 40316210 - 40316121
Alignment:
Q  32 gtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||||||| |||||||||||||||||||||||||||||  ||||||  ||||||||| ||||| |||| ||||||||||||||||    
T  40316210 gtagagaattgaagatatcaaagataaaacatatgcattggtacatgtgtcgaagtcaactaagtcatctattgagggacggagggagta 40316121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 43517231 - 43517323
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatt 123  Q
    |||||||||||||  ||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||| |||| |||| | ||||||    
T  43517231 agtagagaattgatgatatcaaagataaaacatatgcattagtacgtgtgtcagagtcaactaggtcatctattgaggggcggatgaagtatt 43517323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 30779916 - 30780006
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||| |||||||| |||| |||||||||||||||| ||||||| ||||||| |||||||||||||||| |||| ||| ||||||||||||    
T  30779916 agtagtgaattgaagatatgaaagataaaacatatgtattggtacgtgtgtcggagtcaactaggtcatctattgaggaacggagggagta 30780006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 19889744 - 19889678
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtc 97  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  19889744 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcggagtcaactaggtc 19889678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 4300005 - 4300074
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattta 102  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||    
T  4300005 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcattta 4300074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 43067314 - 43067229
Alignment:
Q  36 agaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||| |  |||||||||| ||||    
T  43067314 agaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggaggaagta 43067229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 970226 - 970138
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| ||| ||||||||||||||||||||||||| |||||||  |||||||||| ||||||| |  | |||||||||||||    
T  970226 tagagaattgaagataacaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgagacggagggagta 970138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 16048171 - 16048103
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattt 101  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||    
T  16048171 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcattt 16048103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 39405852 - 39405764
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||| |||| |||||||||||||||||||||||| |||| ||  |||||||||| ||||||| |  |||||||||||||||    
T  39405852 tagagaattgaagatattaaagataaaacatatgcattggtacgtgtctcgaagtcaactagatcatttaatatgggacggagggagta 39405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 42421775 - 42421707
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    |||||||||||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||    
T  42421775 agtagagaattgaagatatcaaagataaaacatatgcataggtacgtgtgtcggagtcaactagatcat 42421707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 16954749 - 16954687
Alignment:
Q  62 atatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtatta 124  Q
    ||||||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  16954749 atatgcattggtacgtgtgtcagagtcaactaagtcatctattgagggacggagggagtatta 16954687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 19868856 - 19868918
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaacta 93  Q
    |||||| ||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||    
T  19868856 agtagacaattgaaaatagcaaagataaaacatatgcattggtacgtgtgtcggagtcaacta 19868918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 22613882 - 22613951
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattta 102  Q
    |||| ||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||    
T  22613882 tagaaaattgaagatatcaaagataaaacatatgcattggtacgtgtgtctaagtcaactagatcattta 22613951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 25563583 - 25563522
Alignment:
Q  38 aattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||   |||||||||||||||    
T  25563583 aattgaagatatcaaagataaaacatatgcattggaacgtgtgttgaagtcaactaggtcat 25563522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 19087946 - 19088009
Alignment:
Q  36 agaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcat 99  Q
    ||||||||| |||||| | ||||||| |||||||||||| ||||||| |||||||||| |||||    
T  19087946 agaattgaagatatcataaataaaacttatgcattggtacgtgtgtcggagtcaactacgtcat 19088009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 35448032 - 35447995
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatt 123  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  35448032 gtcaactaggtcatttattaagggacggagggagtatt 35447995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 37304361 - 37304406
Alignment:
Q  76 gtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||    
T  37304361 gtgtatcagagtcaactaggtcacttattcagggacggagggagta 37304406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 42148533 - 42148570
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatt 123  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  42148533 gtcaactaggtcatttattaagggacggagggagtatt 42148570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 970364 - 970400
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  970364 gtcaactaggtcatttattgagggacggagggagtat 970400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 4299868 - 4299832
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  4299868 gtcaactaggtcatttattgagggacggagggagtat 4299832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 15268198 - 15268138
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaacta 93  Q
    |||||||||||| |||| ||| ||||||||||||||||  || ||||||| ||||||||||    
T  15268198 tagagaattgaagatattaaaaataaaacatatgcattaatacgtgtgtcggagtcaacta 15268138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 22613744 - 22613708
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| |||||||||||||||||    
T  22613744 gtcaactaggtcatttattgagggacggagggagtat 22613708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 29627494 - 29627530
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||| |||||||||||||||||||||||||||||    
T  29627494 gtcaactgggtcatttatttagggacggagggagtat 29627530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 125
Target Start/End: Complemental strand, 5212957 - 5212918
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtattac 125  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  5212957 gtcaactaggtcatttattaagagacggagggagtattac 5212918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 21961315 - 21961256
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 92  Q
    |||| |||| || |||| |||||||||||||||| |||| |||||||| |||||||||||    
T  21961315 tagataattaaagatattaaagataaaacatatgaattgatatgtgtgacagagtcaact 21961256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 2864044 - 2863954
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||||||||| | |||  |||||||  |||| | ||||||||||| |||| ||||  || |||||| |||||    
T  2864044 agtagagaattgaagatatcaaagataaagcgtatatattggtacatgtgacggagtcaactagatcatctattctggaacggagtgagta 2863954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 32300658 - 32300589
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattta 102  Q
    |||| |||| || |||| |||||||||| |||||||||| ||| |||| |||||||||||  ||||||||    
T  32300658 tagataattaaagatattaaagataaaaaatatgcattgatatttgtgacagagtcaactgtgtcattta 32300589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 16048311 - 16048347
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  16048311 gtcaactaggtcatttattgagggacggacggagtat 16048347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 32002049 - 32002013
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  32002049 gtcaactgggtcatttattaagggacggagggagtat 32002013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 32334673 - 32334637
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  32334673 gtcaactgggtcatttattaagggacggagggagtat 32334637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 43067447 - 43067483
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtat 122  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  43067447 gtcaactaggtcatttattgagggacggatggagtat 43067483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 44279 - 44369
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44279 agtagagaattgaagatatcaaagataaaacatatgcattggtatgcgtgtcagagtcaactaggtcatttatttagggacggagggagta 44369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 41388 - 41478
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41388 agtagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattgagggacggagggagta 41478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 12842 - 12752
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12842 agtagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 12752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 10483 - 10393
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10483 agtagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 10393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 14149 - 14059
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||    
T  14149 agtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcagagtcaactaggtcacttatttagggacggagggagta 14059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 117404 - 117321
Alignment:
Q  38 aattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  117404 aattgaagatattaaagataaaacatatgcattgatatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 117321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 117547 - 117585
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatta 124  Q
    ||||||||||||||||||| ||||||||||||| |||||    
T  117547 gtcaactaggtcatttattaagggacggagggaatatta 117585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 15387 - 15477
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||||||||||||| |||||||   |||| |||||||||||||| |||||| |||||||||||||||| ||||| |||||| |||||||||    
T  15387 agtagagaattgaagatatcaacagtaaatcatatgcattggtacgtgtgttagagtcaactaggtcagttattcagggaccgagggagta 15477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 15251 - 15214
Alignment:
Q  86 gtcaactaggtcatttatttagggacggagggagtatt 123  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  15251 gtcaactaggtcatttattaagggacggagggagtatt 15214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 14430 - 14345
Alignment:
Q  36 agaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    ||||||||| ||||||||||||||||||||| ||| ||| || |||| || |||||||| | ||||||| |||||| |||||||||    
T  14430 agaattgaagatatcaaagataaaacatatgtattagtaagtatgtcggaatcaactagattatttattgagggaccgagggagta 14345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 38531 - 38593
Alignment:
Q  31 agtagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaacta 93  Q
    |||||| ||||||| ||||||||||||||||||||||||||||| || ||||  |||||||||    
T  38531 agtagataattgaagatatcaaagataaaacatatgcattggtacgtatgtcgaagtcaacta 38593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 12619 - 12666
Alignment:
Q  33 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtg 80  Q
    |||||||||||| |||| || |||||||||||||||||||||| ||||    
T  12619 tagagaattgaagatattaacgataaaacatatgcattggtatatgtg 12666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 145756 - 145820
Alignment:
Q  57 aaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 121  Q
    |||| ||||||||||||||||||||| ||| ||||||| |||| ||    |||||||||||||||    
T  145756 aaaaaatatgcattggtatgtgtgtctgagccaactagatcatctaacatgggacggagggagta 145820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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