View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453_low_58 (Length: 291)
Name: NF11453_low_58
Description: NF11453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453_low_58 |
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Alignment Details
Target: chr8 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 17 - 282
Target Start/End: Original strand, 30888410 - 30888675
Alignment:
| Q |
17 |
aaaatttgcacattttaatcgaaaggtgttctaattaagcatggtattggatttggaacacagtgatgcagagctaactaatagttctaagtgttttgtt |
116 |
Q |
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| T |
30888410 |
aaaatttgcacattttaatcgaaaggtgttctaattaagcatggtattggatttggaacacagtgatgcagagctaactaatagttctaagtgttttgtt |
30888509 |
T |
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| Q |
117 |
tgagaacatatatacaagtaatctaaagtatgttcttggtttggttaatttttctatgttattaaccaagaacaatcatgagggaaattgttatgattgc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
30888510 |
tgagaacatatatacaagtaatctaaagtatgttcttggtttggttaatttttctatgttattagccaagaacaatcatgagggaaattgttatgattgc |
30888609 |
T |
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| Q |
217 |
aactgctgctacacttgggaatttgttggtgggatgggatagttcaaccattgcaggtgtctgtgc |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
30888610 |
aactgctgctacacttgggaatttgttggtgggatgggatagttcaaccattgcaggtgtgtgtgc |
30888675 |
T |
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