View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11453_low_73 (Length: 249)
Name: NF11453_low_73
Description: NF11453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11453_low_73 |
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Alignment Details
Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 31910454 - 31910682
Alignment:
| Q |
4 |
tatgaaatacgaaaacaacttttatctcattttgtaacacaatttagactataaatagtcagttaattgcaaccaaaattgtgagaaaactgaagggaat |
103 |
Q |
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| T |
31910454 |
tatgaaatacgagaacaacttttatctcattttataacacaatttagactatcaatagtcagttaattgcaaccaaaattgtgagaaaactgaagggaat |
31910553 |
T |
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| Q |
104 |
taagtcttcttctcaaagtaaccaaaatcacttaaaaatgacatgtatattaaaagttatacggaaaatactatcaagatgtccaaaatacgagttgaaa |
203 |
Q |
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|||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||| || |
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| T |
31910554 |
taagtcttcttctcaatgtaactaaaatcacttaaaaatggcatgtatattaaaagttatacgg-aaatactatcaagatatccaaaatacgatttgcaa |
31910652 |
T |
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| Q |
204 |
tattttatataaatcaataaatttagcatg |
233 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
31910653 |
tattttatataaatcaataaatttagcatg |
31910682 |
T |
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