View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11455_high_7 (Length: 533)

Name: NF11455_high_7
Description: NF11455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11455_high_7
NF11455_high_7
[»] chr8 (71 HSPs)
chr8 (1-520)||(4102859-4103378)
chr8 (1-404)||(4080403-4080806)
chr8 (1-404)||(4084552-4084955)
chr8 (1-169)||(35678284-35678452)
chr8 (1-171)||(14816135-14816305)
chr8 (1-171)||(14829435-14829605)
chr8 (1-171)||(13327950-13328120)
chr8 (1-168)||(39701812-39701979)
chr8 (1-169)||(26682068-26682237)
chr8 (1-173)||(7140468-7140640)
chr8 (1-172)||(10129101-10129272)
chr8 (1-171)||(19343845-19344016)
chr8 (1-171)||(3306064-3306234)
chr8 (1-147)||(39024866-39025012)
chr8 (1-172)||(31812110-31812282)
chr8 (1-172)||(12131980-12132152)
chr8 (1-171)||(2161386-2161556)
chr8 (6-171)||(40210835-40211000)
chr8 (18-170)||(9743861-9744013)
chr8 (1-160)||(9801678-9801837)
chr8 (1-173)||(8284577-8284751)
chr8 (1-169)||(1203602-1203770)
chr8 (1-171)||(26834559-26834730)
chr8 (1-171)||(20514630-20514802)
chr8 (1-171)||(6818015-6818186)
chr8 (19-172)||(38527818-38527975)
chr8 (1-171)||(36967079-36967250)
chr8 (1-129)||(18567425-18567553)
chr8 (1-173)||(26363999-26364171)
chr8 (1-128)||(44091360-44091487)
chr8 (10-170)||(8140566-8140727)
chr8 (1-172)||(12189597-12189769)
chr8 (1-172)||(12434025-12434197)
chr8 (83-176)||(13496823-13496917)
chr8 (94-168)||(39703455-39703529)
chr8 (1-173)||(43717561-43717734)
chr8 (1-172)||(9580118-9580290)
chr8 (104-171)||(33514613-33514680)
chr8 (1-171)||(38843702-38843873)
chr8 (8-80)||(45519578-45519651)
chr8 (103-170)||(7750667-7750734)
chr8 (1-133)||(29642639-29642772)
chr8 (7-172)||(45005967-45006132)
chr8 (94-171)||(35745991-35746068)
chr8 (1-116)||(7393254-7393369)
chr8 (1-88)||(14961672-14961760)
chr8 (3-171)||(38047949-38048114)
chr8 (103-173)||(16832429-16832499)
chr8 (71-169)||(44222514-44222611)
chr8 (9-61)||(31451433-31451485)
chr8 (39-173)||(34249673-34249809)
chr8 (1-171)||(38212953-38213125)
chr8 (64-163)||(10974627-10974726)
chr8 (125-172)||(11117131-11117178)
chr8 (23-88)||(37389443-37389509)
chr8 (1-59)||(45518063-45518121)
chr8 (1-77)||(28014867-28014944)
chr8 (104-164)||(10543741-10543801)
chr8 (104-164)||(16586834-16586894)
chr8 (104-164)||(42781480-42781540)
chr8 (66-142)||(45516316-45516390)
chr8 (7-66)||(297199-297258)
chr8 (104-171)||(9824957-9825024)
chr8 (136-175)||(12958529-12958568)
chr8 (1-60)||(15198909-15198968)
chr8 (122-169)||(31261863-31261910)
chr8 (1-77)||(27874690-27874767)
chr8 (6-101)||(32089480-32089577)
chr8 (104-148)||(42306-42350)
chr8 (136-172)||(11923012-11923048)
chr8 (123-171)||(40716273-40716321)
[»] chr5 (47 HSPs)
chr5 (1-171)||(11636730-11636900)
chr5 (1-172)||(8103589-8103760)
chr5 (1-134)||(16174631-16174764)
chr5 (1-171)||(2795522-2795692)
chr5 (44-171)||(5958176-5958303)
chr5 (9-178)||(15190864-15191034)
chr5 (14-168)||(9184209-9184363)
chr5 (1-171)||(30839780-30839950)
chr5 (1-171)||(36597578-36597748)
chr5 (1-170)||(4047412-4047581)
chr5 (3-169)||(12642004-12642170)
chr5 (10-171)||(30328345-30328506)
chr5 (1-171)||(31365959-31366131)
chr5 (5-152)||(28629896-28630043)
chr5 (1-172)||(34578009-34578180)
chr5 (13-171)||(10664986-10665144)
chr5 (1-168)||(32019993-32020161)
chr5 (1-172)||(13515935-13516106)
chr5 (1-157)||(11375972-11376129)
chr5 (1-176)||(40512945-40513120)
chr5 (1-128)||(41350244-41350371)
chr5 (1-173)||(3398216-3398389)
chr5 (1-142)||(6863584-6863725)
chr5 (4-172)||(18841717-18841886)
chr5 (14-170)||(24329657-24329813)
chr5 (1-133)||(15240959-15241092)
chr5 (1-171)||(35469551-35469723)
chr5 (1-80)||(14466503-14466583)
chr5 (1-132)||(31567500-31567632)
chr5 (1-58)||(30893741-30893798)
chr5 (1-171)||(11249967-11250136)
chr5 (1-170)||(29628500-29628671)
chr5 (1-170)||(24014697-24014866)
chr5 (125-173)||(15241226-15241274)
chr5 (122-177)||(40166244-40166299)
chr5 (104-173)||(13761667-13761736)
chr5 (104-173)||(31613261-31613330)
chr5 (64-171)||(10658363-10658467)
chr5 (104-164)||(12332343-12332403)
chr5 (104-164)||(31704935-31704995)
chr5 (104-164)||(40454067-40454127)
chr5 (136-171)||(14466634-14466669)
chr5 (136-175)||(16160885-16160924)
chr5 (118-168)||(11692758-11692808)
chr5 (113-171)||(18150377-18150435)
chr5 (119-169)||(33072677-33072727)
chr5 (15-65)||(34903409-34903459)
[»] chr7 (58 HSPs)
chr7 (15-171)||(39869121-39869276)
chr7 (1-171)||(19889339-19889509)
chr7 (1-167)||(7170005-7170171)
chr7 (1-171)||(23982764-23982935)
chr7 (1-171)||(5909291-5909461)
chr7 (1-171)||(9331960-9332130)
chr7 (1-170)||(12085940-12086109)
chr7 (1-169)||(39757119-39757287)
chr7 (1-168)||(3561887-3562054)
chr7 (1-168)||(36548469-36548636)
chr7 (1-177)||(24462964-24463140)
chr7 (1-171)||(33342987-33343157)
chr7 (1-172)||(46290008-46290179)
chr7 (1-168)||(47457470-47457638)
chr7 (1-171)||(32117813-32117983)
chr7 (30-172)||(47120232-47120374)
chr7 (65-171)||(24250312-24250417)
chr7 (1-169)||(25709408-25709577)
chr7 (1-80)||(41331465-41331545)
chr7 (1-171)||(34270264-34270430)
chr7 (39-169)||(19868114-19868245)
chr7 (4-171)||(12650819-12650986)
chr7 (6-132)||(384444-384570)
chr7 (1-169)||(42750289-42750452)
chr7 (1-172)||(45501456-45501628)
chr7 (1-171)||(7040261-7040431)
chr7 (1-125)||(18102239-18102364)
chr7 (1-169)||(26300573-26300740)
chr7 (1-171)||(4969771-4969942)
chr7 (8-171)||(12624636-12624798)
chr7 (1-73)||(24250595-24250667)
chr7 (113-171)||(4161880-4161938)
chr7 (1-149)||(8091321-8091470)
chr7 (64-152)||(24699153-24699240)
chr7 (1-56)||(22334030-22334085)
chr7 (1-80)||(5833444-5833524)
chr7 (1-154)||(3530123-3530276)
chr7 (1-122)||(7899495-7899617)
chr7 (1-168)||(27300428-27300598)
chr7 (1-47)||(33072104-33072150)
chr7 (1-58)||(26050470-26050527)
chr7 (1-58)||(26059829-26059886)
chr7 (122-171)||(26951625-26951674)
chr7 (136-172)||(27696704-27696740)
chr7 (104-164)||(28061435-28061495)
chr7 (104-164)||(38798320-38798380)
chr7 (104-164)||(42593506-42593566)
chr7 (104-171)||(29398227-29398294)
chr7 (104-162)||(38798182-38798240)
chr7 (1-58)||(8170633-8170690)
chr7 (1-77)||(29398143-29398220)
chr7 (1-34)||(44807035-44807068)
chr7 (50-125)||(2276719-2276795)
chr7 (1-61)||(8595007-8595066)
chr7 (67-171)||(24639541-24639644)
chr7 (65-161)||(38554246-38554342)
chr7 (83-171)||(44806932-44807020)
chr7 (104-148)||(45645389-45645433)
[»] chr2 (61 HSPs)
chr2 (1-172)||(27665053-27665224)
chr2 (1-172)||(14377422-14377593)
chr2 (1-171)||(19228424-19228594)
chr2 (1-171)||(16126568-16126738)
chr2 (3-172)||(22705452-22705621)
chr2 (1-173)||(16919163-16919335)
chr2 (2-171)||(15411632-15411802)
chr2 (1-171)||(12016665-12016835)
chr2 (3-174)||(4821278-4821443)
chr2 (1-172)||(5583567-5583738)
chr2 (1-168)||(12919359-12919528)
chr2 (1-157)||(16123291-16123447)
chr2 (1-172)||(23932562-23932734)
chr2 (18-172)||(39904074-39904228)
chr2 (1-172)||(9747314-9747486)
chr2 (7-172)||(13351226-13351392)
chr2 (3-132)||(2060053-2060183)
chr2 (2-171)||(26229864-26230032)
chr2 (9-176)||(37471757-37471927)
chr2 (1-169)||(7757795-7757963)
chr2 (52-152)||(22162137-22162237)
chr2 (4-176)||(34213961-34214136)
chr2 (1-127)||(8770895-8771021)
chr2 (3-88)||(15231912-15231998)
chr2 (1-173)||(20566026-20566199)
chr2 (9-153)||(41492150-41492293)
chr2 (64-173)||(10690779-10690887)
chr2 (1-169)||(36731181-36731349)
chr2 (104-169)||(4579901-4579966)
chr2 (1-153)||(38248429-38248580)
chr2 (4-171)||(43806358-43806526)
chr2 (1-162)||(9450264-9450426)
chr2 (1-129)||(45062238-45062367)
chr2 (1-173)||(7720111-7720284)
chr2 (65-174)||(12438723-12438830)
chr2 (1-132)||(24729586-24729718)
chr2 (5-168)||(25998015-25998179)
chr2 (83-171)||(43388858-43388946)
chr2 (113-172)||(26003613-26003672)
chr2 (1-60)||(29157838-29157897)
chr2 (91-173)||(3504467-3504548)
chr2 (2-172)||(35729113-35729285)
chr2 (64-153)||(2051630-2051719)
chr2 (1-77)||(4576335-4576412)
chr2 (104-164)||(3286501-3286561)
chr2 (104-164)||(3951256-3951316)
chr2 (104-164)||(8847793-8847853)
chr2 (136-168)||(25970068-25970100)
chr2 (1-76)||(26003355-26003431)
chr2 (68-172)||(34817541-34817644)
chr2 (104-164)||(43941966-43942026)
chr2 (116-171)||(29795056-29795111)
chr2 (53-171)||(36612792-36612911)
chr2 (53-171)||(36620643-36620762)
chr2 (113-171)||(16754969-16755027)
chr2 (1-47)||(17265527-17265573)
chr2 (83-169)||(27865907-27865992)
chr2 (1-133)||(29142110-29142243)
chr2 (9-169)||(40562094-40562255)
chr2 (125-178)||(44195940-44195993)
chr2 (64-168)||(45302340-45302445)
[»] chr3 (63 HSPs)
chr3 (1-171)||(11610913-11611083)
chr3 (1-169)||(20938057-20938226)
chr3 (1-171)||(13495292-13495463)
chr3 (1-144)||(40497073-40497216)
chr3 (1-174)||(38389442-38389616)
chr3 (1-171)||(3863328-3863498)
chr3 (1-173)||(2571265-2571437)
chr3 (12-170)||(50364190-50364348)
chr3 (1-172)||(10307764-10307935)
chr3 (1-173)||(46492352-46492525)
chr3 (1-172)||(12515483-12515654)
chr3 (1-172)||(23638058-23638230)
chr3 (1-170)||(32553366-32553535)
chr3 (4-142)||(16875037-16875175)
chr3 (65-167)||(37444149-37444250)
chr3 (27-168)||(54621253-54621394)
chr3 (3-169)||(54527717-54527884)
chr3 (94-168)||(51339286-51339360)
chr3 (1-171)||(51618048-51618216)
chr3 (1-80)||(23523035-23523115)
chr3 (1-171)||(37055375-37055546)
chr3 (1-171)||(50204401-50204572)
chr3 (1-171)||(36426418-36426591)
chr3 (1-52)||(11611094-11611145)
chr3 (1-172)||(42180049-42180221)
chr3 (1-61)||(29686429-29686489)
chr3 (1-171)||(51567829-51567998)
chr3 (84-171)||(30214103-30214189)
chr3 (83-173)||(46845532-46845622)
chr3 (40-153)||(53794780-53794894)
chr3 (104-152)||(35094973-35095021)
chr3 (121-169)||(48240218-48240266)
chr3 (8-160)||(2379088-2379238)
chr3 (115-170)||(39365255-39365310)
chr3 (104-171)||(47386920-47386987)
chr3 (11-132)||(38786343-38786463)
chr3 (1-76)||(39364879-39364955)
chr3 (94-165)||(15863008-15863079)
chr3 (1-123)||(24978693-24978815)
chr3 (83-171)||(28992869-28992959)
chr3 (1-60)||(41151743-41151802)
chr3 (9-55)||(36812373-36812419)
chr3 (17-169)||(1569215-1569368)
chr3 (1-125)||(23803055-23803180)
chr3 (104-173)||(29932464-29932533)
chr3 (104-173)||(29981618-29981687)
chr3 (9-81)||(41541333-41541406)
chr3 (104-169)||(43750052-43750117)
chr3 (2-77)||(49396472-49396548)
chr3 (413-452)||(275229-275268)
chr3 (3-66)||(27549648-27549711)
chr3 (64-162)||(53718313-53718412)
chr3 (101-164)||(54027041-54027103)
chr3 (78-164)||(24569324-24569410)
chr3 (1-66)||(2566586-2566651)
chr3 (23-122)||(7940838-7940939)
chr3 (50-166)||(13879865-13879981)
chr3 (1-77)||(45983598-45983675)
chr3 (118-170)||(27549537-27549589)
chr3 (115-171)||(29685884-29685940)
chr3 (32-171)||(32321764-32321901)
chr3 (64-116)||(44567929-44567981)
chr3 (3-130)||(51401479-51401607)
[»] chr1 (64 HSPs)
chr1 (1-167)||(6754474-6754640)
chr1 (1-171)||(39150336-39150506)
chr1 (1-172)||(41624827-41624998)
chr1 (1-171)||(17919452-17919622)
chr1 (1-148)||(30363004-30363152)
chr1 (1-171)||(313748-313918)
chr1 (1-178)||(30171870-30172048)
chr1 (1-178)||(30187411-30187589)
chr1 (1-171)||(1502729-1502899)
chr1 (1-170)||(44918024-44918193)
chr1 (1-173)||(23576423-23576595)
chr1 (4-168)||(8062206-8062370)
chr1 (1-171)||(23591696-23591867)
chr1 (1-171)||(34801966-34802136)
chr1 (3-132)||(39930812-39930941)
chr1 (24-172)||(39627603-39627752)
chr1 (94-171)||(51382370-51382447)
chr1 (1-172)||(22167332-22167504)
chr1 (1-152)||(36490796-36490948)
chr1 (1-127)||(6569994-6570120)
chr1 (24-168)||(32716195-32716339)
chr1 (11-130)||(31100952-31101071)
chr1 (1-171)||(6307501-6307671)
chr1 (1-172)||(6180183-6180355)
chr1 (14-170)||(21854139-21854295)
chr1 (9-176)||(47355395-47355562)
chr1 (1-171)||(13321874-13322045)
chr1 (1-123)||(30288873-30288995)
chr1 (1-122)||(9516628-9516750)
chr1 (1-158)||(25465170-25465327)
chr1 (9-170)||(38539086-38539245)
chr1 (9-170)||(38561304-38561463)
chr1 (1-171)||(38812738-38812909)
chr1 (11-122)||(52833491-52833602)
chr1 (64-171)||(6520710-6520816)
chr1 (1-169)||(7520005-7520175)
chr1 (26-171)||(34050317-34050463)
chr1 (1-97)||(12947563-12947660)
chr1 (3-86)||(3096292-3096376)
chr1 (1-172)||(35512722-35512894)
chr1 (1-98)||(13241828-13241926)
chr1 (1-122)||(35438762-35438884)
chr1 (8-172)||(7824874-7825039)
chr1 (6-77)||(5057094-5057166)
chr1 (94-173)||(22331619-22331698)
chr1 (103-169)||(43317490-43317556)
chr1 (83-164)||(11744920-11745001)
chr1 (1-66)||(16966469-16966534)
chr1 (81-158)||(40799348-40799425)
chr1 (1-66)||(41676569-41676634)
chr1 (104-164)||(9661902-9661962)
chr1 (1-61)||(10896462-10896522)
chr1 (9-172)||(23808432-23808595)
chr1 (104-164)||(42589178-42589238)
chr1 (9-61)||(44007547-44007599)
chr1 (104-164)||(44012931-44012991)
chr1 (1-132)||(2222245-2222375)
chr1 (118-169)||(36578332-36578383)
chr1 (113-171)||(399544-399602)
chr1 (405-458)||(33694222-33694275)
chr1 (408-457)||(38520017-38520066)
chr1 (1-169)||(51920440-51920609)
chr1 (103-151)||(4249225-4249273)
chr1 (9-69)||(19348860-19348920)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-171)||(52788-52958)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-171)||(145676-145846)
[»] chr6 (50 HSPs)
chr6 (2-169)||(1017788-1017956)
chr6 (1-168)||(31169772-31169940)
chr6 (1-171)||(6016854-6017025)
chr6 (1-173)||(8977475-8977648)
chr6 (1-177)||(28943778-28943954)
chr6 (24-170)||(5362925-5363071)
chr6 (1-171)||(14228135-14228305)
chr6 (1-126)||(17596385-17596510)
chr6 (1-172)||(10887026-10887198)
chr6 (73-171)||(26602512-26602610)
chr6 (1-148)||(31069591-31069738)
chr6 (1-171)||(17552596-17552766)
chr6 (1-171)||(18332697-18332868)
chr6 (1-171)||(29863311-29863482)
chr6 (3-171)||(33017723-33017891)
chr6 (1-168)||(2830690-2830857)
chr6 (23-150)||(22974604-22974731)
chr6 (23-150)||(23813670-23813797)
chr6 (1-171)||(31790925-31791096)
chr6 (1-171)||(31568111-31568278)
chr6 (1-171)||(34692352-34692523)
chr6 (1-62)||(3853051-3853112)
chr6 (3-164)||(31503748-31503909)
chr6 (23-171)||(30623324-30623473)
chr6 (9-171)||(17154620-17154784)
chr6 (1-169)||(27819636-27819807)
chr6 (113-167)||(17596315-17596369)
chr6 (104-169)||(32615572-32615640)
chr6 (103-174)||(12454061-12454132)
chr6 (123-172)||(10345671-10345720)
chr6 (122-170)||(1814912-1814960)
chr6 (105-152)||(2086949-2086996)
chr6 (70-169)||(3485677-3485776)
chr6 (66-144)||(3850577-3850654)
chr6 (1-129)||(17141315-17141444)
chr6 (31-167)||(31039706-31039843)
chr6 (63-171)||(29730276-29730384)
chr6 (1-148)||(30591172-30591320)
chr6 (104-164)||(34733813-34733873)
chr6 (104-171)||(24979262-24979329)
chr6 (122-169)||(28757617-28757664)
chr6 (1-152)||(29065434-29065587)
chr6 (1-152)||(29120287-29120440)
chr6 (1-98)||(23936385-23936483)
chr6 (137-170)||(2086999-2087032)
chr6 (18-51)||(26602478-26602511)
chr6 (104-152)||(29061095-29061143)
chr6 (104-152)||(29074552-29074600)
chr6 (104-152)||(29079316-29079364)
chr6 (104-152)||(29107125-29107173)
[»] chr4 (76 HSPs)
chr4 (1-171)||(7349687-7349857)
chr4 (1-171)||(47326901-47327072)
chr4 (1-171)||(47341697-47341868)
chr4 (4-171)||(8736823-8736990)
chr4 (1-171)||(16667393-16667564)
chr4 (1-171)||(54495646-54495817)
chr4 (1-172)||(34941275-34941447)
chr4 (1-167)||(49181074-49181241)
chr4 (1-158)||(29190825-29190982)
chr4 (1-171)||(50352301-50352471)
chr4 (1-170)||(9759151-9759320)
chr4 (1-138)||(41415566-41415703)
chr4 (1-173)||(17409820-17409993)
chr4 (1-168)||(23553571-23553739)
chr4 (3-172)||(40049556-40049725)
chr4 (3-170)||(10389279-10389446)
chr4 (1-169)||(35999956-36000117)
chr4 (1-86)||(23051391-23051477)
chr4 (4-172)||(2096868-2097037)
chr4 (3-170)||(19468193-19468361)
chr4 (1-152)||(39876848-39876999)
chr4 (95-171)||(49228355-49228431)
chr4 (1-171)||(27362389-27362560)
chr4 (1-168)||(27756561-27756730)
chr4 (1-171)||(52391296-52391467)
chr4 (1-152)||(10813503-10813655)
chr4 (4-142)||(53961350-53961488)
chr4 (3-167)||(19450911-19451076)
chr4 (1-168)||(51691343-51691510)
chr4 (1-171)||(27019258-27019429)
chr4 (30-176)||(39539457-39539604)
chr4 (1-129)||(4329635-4329763)
chr4 (9-176)||(9326884-9327054)
chr4 (70-171)||(49332331-49332432)
chr4 (1-172)||(23545473-23545645)
chr4 (94-170)||(49650210-49650286)
chr4 (9-172)||(9373606-9373772)
chr4 (9-172)||(9381918-9382084)
chr4 (105-173)||(10658557-10658625)
chr4 (105-173)||(10872702-10872770)
chr4 (3-132)||(23438193-23438322)
chr4 (1-171)||(24684834-24685006)
chr4 (5-169)||(25843291-25843459)
chr4 (1-137)||(48910811-48910947)
chr4 (5-80)||(36971363-36971439)
chr4 (1-61)||(49228763-49228823)
chr4 (1-173)||(16069216-16069387)
chr4 (122-172)||(48910965-48911015)
chr4 (1-168)||(33632212-33632379)
chr4 (64-150)||(35645074-35645163)
chr4 (1-87)||(42479901-42479988)
chr4 (10-99)||(1378088-1378178)
chr4 (94-172)||(3085349-3085427)
chr4 (9-134)||(37784877-37785003)
chr4 (64-169)||(6875501-6875606)
chr4 (1-101)||(10658426-10658527)
chr4 (1-101)||(10872571-10872672)
chr4 (68-149)||(13009832-13009913)
chr4 (1-54)||(40682548-40682600)
chr4 (1-76)||(18882276-18882352)
chr4 (104-164)||(32459337-32459397)
chr4 (119-171)||(36968286-36968338)
chr4 (324-364)||(40282554-40282594)
chr4 (104-164)||(41887681-41887741)
chr4 (2-66)||(49250345-49250409)
chr4 (69-168)||(42480000-42480099)
chr4 (1-111)||(55813922-55814033)
chr4 (137-171)||(9971710-9971744)
chr4 (134-172)||(39876806-39876844)
chr4 (8-66)||(41488734-41488792)
chr4 (113-171)||(45742366-45742424)
chr4 (104-141)||(35911143-35911180)
chr4 (405-457)||(961274-961326)
chr4 (119-171)||(1377452-1377504)
chr4 (113-169)||(3728249-3728305)
chr4 (1-115)||(51070407-51070520)
[»] scaffold0111 (1 HSPs)
scaffold0111 (1-172)||(37123-37295)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-171)||(13084-13254)
[»] scaffold0727 (1 HSPs)
scaffold0727 (1-168)||(5692-5860)
[»] scaffold0618 (1 HSPs)
scaffold0618 (1-128)||(8423-8550)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-168)||(94027-94195)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-150)||(3422-3572)
[»] scaffold0073 (1 HSPs)
scaffold0073 (1-171)||(16544-16714)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-128)||(182085-182211)
[»] scaffold0009 (3 HSPs)
scaffold0009 (64-171)||(43460-43567)
scaffold0009 (3-132)||(191326-191454)
scaffold0009 (135-178)||(193376-193419)
[»] scaffold0305 (2 HSPs)
scaffold0305 (6-153)||(17802-17951)
scaffold0305 (64-148)||(18069-18153)
[»] scaffold0192 (1 HSPs)
scaffold0192 (3-61)||(13574-13632)
[»] scaffold0129 (1 HSPs)
scaffold0129 (113-172)||(13780-13839)
[»] scaffold0631 (1 HSPs)
scaffold0631 (119-168)||(443-492)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-77)||(1452-1529)


Alignment Details
Target: chr8 (Bit Score: 416; Significance: 0; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 1 - 520
Target Start/End: Original strand, 4102859 - 4103378
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttatattaaatatgtaaatttttagtaattaattgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4102859 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttttgcatttatattaaatatgtaaatttttagtaattaattgt 4102958  T
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaaaatttccttnnnnnnntagggttaaa 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  4102959 tagttttcaatgaaaagttactacttttactttccttaacatgtgcaatattacacatgttagacaaacccaaaaatttccttaaaaaaatagggttaaa 4103058  T
Q  201 taaatttttggtaccataaatatactannnnnnnnnnnnncgtcctcttaaaaattttctttaattaatggtttctaaatgcttgacatcaacaaatttg 300  Q
    ||| |||||||||| ||||||||||||              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4103059 taagtttttggtactataaatatactatttttttgtttttggtcctcttaaaaattttctttaattaatggtttctaaatgcttgacatcaacaaatttg 4103158  T
Q  301 gtcctctttgacgaaaaacattcaaaggtccatggttggaccttttttgaaagggtgcatattatggtgtgtgcgtagtaagaacataatgagattatga 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4103159 gtcctctttgacgaaaaacattcaaaggtccatggttggaccttttttgaaagggtgcatattatggtgtgtgcgtagtaagaacataatgagattatga 4103258  T
Q  401 aatggagagttgttttaaaagttgtctataaatgattgtacaaatattatttttcttagaaaatagctgaaagtttatatttaaacaaatatttattaat 500  Q
    |||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  4103259 aatggagaattgtttcaaaagttgtctataaatgattatacaaatattatttttcttagaaaatagttggaagtttatatttaaacaaatatttattaat 4103358  T
Q  501 acgagcatagatggtctatc 520  Q
    |||||||||||||| |||||    
T  4103359 acgagcatagatggcctatc 4103378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 1 - 404
Target Start/End: Original strand, 4080403 - 4080806
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttatattaaatatgtaaatttttagtaattaattgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4080403 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttatattaaatatgtaaatttttagtaattaattgt 4080502  T
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaaaatttccttnnnnnnntagggttaaa 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  4080503 tagttttcaatgaaaagttactacttttactttccttaacatgtgcaatattacacatgttagacaaacccaaaaatttccttaaaaaaatagggttaaa 4080602  T
Q  201 taaatttttggtaccataaatatactannnnnnnnnnnnncgtcctcttaaaaattttctttaattaatggtttctaaatgcttgacatcaacaaatttg 300  Q
    ||| |||||||||| ||||||||||||              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4080603 taagtttttggtactataaatatactatttttttgtttttggtcctcttaaaaattttctttaattaatggtttctaaatgcttgacatcaacaaatttg 4080702  T
Q  301 gtcctctttgacgaaaaacattcaaaggtccatggttggaccttttttgaaagggtgcatattatggtgtgtgcgtagtaagaacataatgagattatga 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4080703 gtcctctttgacgaaaaacattcaaaggtccatggttggaccttttttgaaagggtgcatattatggtgtgtgcgtagtaagaacataatgagattatga 4080802  T
Q  401 aatg 404  Q
    ||||    
T  4080803 aatg 4080806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 404
Target Start/End: Original strand, 4084552 - 4084955
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttatattaaatatgtaaatttttagtaattaattgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4084552 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttatgcatttatattaaatatgtaaatttttagtaattaattgt 4084651  T
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaaaatttccttnnnnnnntagggttaaa 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  4084652 tagttttcaatgaaaagttactacttttactttccttaacatgtgcaatattacacatgttagacaaacccaaaaatttccttaaaaaaatagggttaaa 4084751  T
Q  201 taaatttttggtaccataaatatactannnnnnnnnnnnncgtcctcttaaaaattttctttaattaatggtttctaaatgcttgacatcaacaaatttg 300  Q
    ||| |||||||||| ||||||||||||              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4084752 taagtttttggtactataaatatactatttttttgtttttggtcctcttaaaaattttctttaattaatggtttctaaatgcttgacatcaacaaatttg 4084851  T
Q  301 gtcctctttgacgaaaaacattcaaaggtccatggttggaccttttttgaaagggtgcatattatggtgtgtgcgtagtaagaacataatgagattatga 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4084852 gtcctctttgacgaaaaacattcaaaggtccatggttggaccttttttgaaagggtgcatattatggtgtgtgcgtagtaagaacataatgagattatga 4084951  T
Q  401 aatg 404  Q
    ||||    
T  4084952 aatg 4084955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 35678284 - 35678452
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttatattaaatatgtaaatttttagtaattaattgt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  35678284 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgtatttatattaaatatgtaaatttttaataattaattgt 35678383  T
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    | |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  35678384 tggttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttagacaaac 35678452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 14816135 - 14816305
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttatattaaatatgtaaatttttagtaattaattgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  14816135 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtgtatttatattaaatatgtaaatttttaataattaattgt 14816234  T
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    | ||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  14816235 tggttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttagacaaaccc 14816305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 14829605 - 14829435
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttatattaaatatgtaaatttttagtaattaattgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  14829605 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtgtatttatattaaatatgtaaatttttaataattaattgt 14829506  T
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    | ||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  14829505 tggttttcaataaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttagacaaaccc 14829435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 13327950 - 13328120
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||  ||| |||||||||||||||  ||| |  ||| |||||    
T  13327950 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaacatttaatcaat-aattg 13328048  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  13328049 ttggttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcacatgttagacaaaccc 13328120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 39701812 - 39701979
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||||||||| |||||  ||| ||||||||||||||| |||| | || | |||||    
T  39701812 tcatgtgcaaatttgcacatgttaacaagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgtaacttttaattagt-aattg 39701910  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    || |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  39701911 ttggttttcaacgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaa 39701979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 26682237 - 26682068
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||  |||||| ||| ||||||    
T  26682237 tcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatgtgtagctttttaataaataattg 26682138  T
Q  100 ttagttttcaat-gaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    || |||||||||  |||| |||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  26682137 tt-gttttcaataaaaaaattactacttttagttgttttaacatgtgcaatattgcacatgttagacaaac 26682068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 7140468 - 7140640
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||  |||||| ||||||||||||| ||| ||||| ||||||||  ||| ||||||||||||||  |||||| | | ||||||    
T  7140468 tcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtag-tttttaatcaataattg 7140566  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    || ||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  7140567 ttggttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaacccaa 7140640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 10129272 - 10129101
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||||||| ||| ||||| ||||||||  ||| ||||||||||||||  |||| |  ||| |||||    
T  10129272 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaat-aattg 10129174  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    || |||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  10129173 ttggttttcaatgaaaaattactaattttagttaccttaacatgtgcaatattgcacatgttagacaaaccca 10129101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 19343845 - 19344016
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt--atattaaatatgtaaatttttagtaattaatt 98  Q
    ||||||||||||||||||||| ||| |  ||||||||||||| |||||||||||||||||   |||  ||||||||||||||| |||| | | | |||||    
T  19343845 tcatgtgcaaatttgcacatgttaacacgtttaaagtagtaattttgacttgaaacttgtattttttaatattaaatatgtaactttt-actcaataatt 19343943  T
Q  99 gttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||| ||||||||||    
T  19343944 gttggttttcaatgaaaagttactacttttggttaccttaacatgtgcaatattgcacatgtaagacaaaccc 19344016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 3306064 - 3306234
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||  ||||||||||  |||||  ||| |||||| ||| |||||  ||| ||||||    
T  3306064 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtatcaaatatataactttttgttaaataattg 3306163  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||| |||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  3306164 ttggttt-caataaaaacttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 3306234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 39024866 - 39025012
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||| |||||||||| |||||| ||||||| ||||||||||    
T  39024866 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgcattttatattaactatgtagatttttaataattaattg 39024965  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgca 147  Q
    || | ||||||| |||||||| ||||||||||| |||| | |||||||    
T  39024966 tt-ggtttcaataaaaagttattacttttagttgcctttagatgtgca 39025012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 31812282 - 31812110
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||  |||||| |||||| | |||| ||||||||| ||||||||||||| ||||||||||||||  |||||| ||| ||| |     
T  31812282 tcatgtgcaaatttgcacatattaagaagtttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 31812183  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||| |||||||| |||| ||||||||||||| |  ||||||||||||||| || |||||||||||||||||||    
T  31812182 ttatttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaaccca 31812110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 12132152 - 12131980
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||| |||||| ||||||||| |||||||||||||||||||| ||||  ||| ||||||  ||||| ||||||||||| ||| |||||| ||| || |||    
T  12132152 tcatctgcaaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttgaacattttatattaaatatataactttttaataaatacttg 12132053  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    |   |||||||| ||||||| |||||||||||||| |||||||||||||| || |||||||||||||||||||    
T  12132052 tggtttttcaataaaaagttgctacttttagtttctttaacatgtgcaatgttgcacatgttagacaaaccca 12131980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 2161556 - 2161386
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttata-ttaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||  ||| ||||||  |||||  | |||||||| ||| |||||  ||| ||||||    
T  2161556 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgaattaaatatataactttttgttaaataattg 2161457  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||| |||| |||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  2161456 ttggttt-caataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 2161386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 6 - 171
Target Start/End: Original strand, 40210835 - 40211000
Alignment:
Q  6 tgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagt 104  Q
    |||||||||||||||| |||||  |||||| |||||||||||||||  || |||||  ||| |||||||||||||||  ||| |  ||| ||||||| ||    
T  40210835 tgcaaatttgcacatgttaagacgtttaaattagtaactttgactttgaatttgtgttttttatattaaatatgtaacatttaatcaat-aattgttggt 40210933  T
Q  105 tttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  40210934 tttcaatgaaaagttaatacttttagttaccttaacatatgcaatattgcacatgttagacaaaccc 40211000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 18 - 170
Target Start/End: Complemental strand, 9744013 - 9743861
Alignment:
Q  18 catgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaa 116  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||  ||| ||||||||||||||| |||| | ||| |||||||| ||||||||| ||||    
T  9744013 catgataagaagtttaaagtagtaactttgacttggaacttatgttttttatattaaatatgtaacttttaa-taaataattgttggttttcaataaaaa 9743915  T
Q  117 gttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
     |||||||||||||||  |||||||||  ||||||| |||||||||||||||||    
T  9743914 attactacttttagttgtcttaacatgcacaatattgcacatgttagacaaacc 9743861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 9801837 - 9801678
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcat-ttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||  | ||||||||||||| | || ||||| | | ||||||    
T  9801837 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttgaaacttatgtttgttatattaaatatat-aacttttaatcaataattg 9801739  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgt 160  Q
    ||  |||||||||||||||||||||||||| || | |||| |||| ||||||| |||||||    
T  9801738 ttgattttcaatgaaaagttactacttttaattactttaatatgtacaatattgcacatgt 9801678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 8284577 - 8284751
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaa-tttttagtaattaatt 98  Q
    ||||||||||||||| ||||| |||||| |||||| ||| ||||| |||||| |||||||| |||| |||||||||| ||    |||||| ||| |||||    
T  8284577 tcatgtgcaaatttgtacatgttaagaagtttaaattagcaacttcgacttggaacttgtgtattttatattaaataggtggtctttttaataaataatt 8284676  T
Q  99 gttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    |||  |||| ||| |||||||||||||||||||| | ||||||||||||||| | ||||||||||||||||||||    
T  8284677 gttcttttttaataaaaagttactacttttagttgctttaacatgtgcaatactgcacatgttagacaaacccaa 8284751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 1203770 - 1203602
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||| |  |||||||||   ||||||||||||||||||   || | ||| |||||     
T  1203770 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaattttgattaaaaacttgtgttttttatattaaatatgtaacagttaattaa-taatta 1203672  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    || ||||||||||||||||||||  ||||||||  ||||| |||||||||||| || |||||||||||||    
T  1203671 tttgttttcaatgaaaagttactttttttagttatcttaatatgtgcaatattgcatatgttagacaaac 1203602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 26834730 - 26834559
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||| ||  ||||||||||||| | |||| ||||||||| ||||||||||||| ||||||||||||||  |||||| ||| ||| |     
T  26834730 tcatgtgcaaatttgcatatattaagaaatttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 26834631  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  |||||||| |||| ||||||||||||| |  |||| |||||||||| || || |||||||||||||||    
T  26834630 ttgtttttcaataaaaaattactacttttagatatcttagcatgtgcaatgttgcatatgttagacaaaccc 26834559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 20514802 - 20514630
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||| ||||||||| | ||||||||||||| | |||| |||| |||| ||||||| ||||| ||||||||||| ||| |||||| ||| ||||||    
T  20514802 tcatgtgcatatttgcacaggttaagaaatttaaaatggtaagtttgtcttggaacttgtacattttatattaaatatataactttttaataaataattg 20514703  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaata-ttacacatgttagacaaaccc 171  Q
     || |||||||| | || |||||||||| |||| | ||| ||||||||||| || ||||||||||||||||||    
T  20514702 gtatttttcaataagaaattactactttaagttgctttaccatgtgcaatatttgcacatgttagacaaaccc 20514630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 6818186 - 6818015
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||| ||||| |||||| |||||| ||||||  |||  | | ||||||||||||| ||||||| |||  || |||||| ||| ||||||    
T  6818186 tcatgtgcaaatttgtacatgttaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaactttttaataaataattg 6818087  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||||||||| |||||||||| |||||||| | ||||||| | ||||||| ||||||||||||||||||    
T  6818086 ttctttttcaatgtaaagttactatttttagttcctttaacatatacaatattgcacatgttagacaaaccc 6818015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 38527975 - 38527818
Alignment:
Q  19 atgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaat---taattgttagttttcaatgaa 114  Q
    |||||||||| ||||||||| ||| ||||| ||| || |||||  ||| ||||||||||||||  |||| |  |||   |||| ||| ||||||||||||    
T  38527975 atgataagaagtttaaagtaataattttgatttggaatttgtgttttttatattaaatatgtagcttttaataaataaataatcgttggttttcaatgaa 38527876  T
Q  115 aagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  38527875 aagttattacttttagttgccttaacatgtgcaatattgcacatgttagacaaaccca 38527818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 36967079 - 36967250
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| ||| |||||||  ||||||||||  ||||| |||||||||||  || |||| | ||  ||||||    
T  36967079 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaactttgtattgaaacttgcacatttaatattaaatataaaacttttgaatatataattg 36967178  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||| |||  ||||||||||||| ||||||  |||||||||| |||| || ||||||||||||||||||    
T  36967179 ttgttttccaagaaaaagttactactattagttgtcttaacatgtacaatgttgcacatgttagacaaaccc 36967250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 18567425 - 18567553
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||||||| ||| ||||   |||||||||||||||| ||  |||| | | ||||||    
T  18567425 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacatgtgttttttatattaaatatgt-aacatttaatcaataattg 18567523  T
Q  100 ttagttttcaatgaaaagttactactttta 129  Q
    || ||||||||||||||||||| |||||||    
T  18567524 ttggttttcaatgaaaagttaccactttta 18567553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 26363999 - 26364171
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||||  ||| ||||||  |||||  |||||| | | ||| |||||  ||| ||||||    
T  26363999 tcatgtgcaaatttgcgcatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttctattaattgtataactttttgttaaataattg 26364098  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    ||  |||| ||| |||| || |||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||    
T  26364099 ttgatttt-aataaaaactttctacttttagttaccttaacatgtgcaatattgcacatgttagataaatccaa 26364171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 44091487 - 44091360
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||||| ||| |||||||||||||||||||||||||| ||  |||||||||| |||||||||||| ||||  |||||| ||| ||||||    
T  44091487 tcatgtgtaaatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataaataattg 44091388  T
Q  100 ttagttttcaatgaaaagttactactttt 128  Q
    || ||||||||| |||| ||| |||||||    
T  44091387 tt-gttttcaataaaaaattaatactttt 44091360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 170
Target Start/End: Complemental strand, 8140727 - 8140566
Alignment:
Q  10 aatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttc 108  Q
    |||||||||||| ||||||  |||||||| ||| |||||||| ||| || ||  ||| ||||||||||||||  |||| | ||| |||||||| ||||||    
T  8140727 aatttgcacatgttaagaagattaaagtaataattttgacttaaaatttatgttttttatattaaatatgtagcttttaa-taaataattgttggttttc 8140629  T
Q  109 aatgaaaagttactacttttagtttccttaacatgtgcaatattac-acatgttagacaaacc 170  Q
    |||||||| | ||||||||||||| |||||||||||  |||||||| | ||||||||||||||    
T  8140628 aatgaaaaatcactacttttagttgccttaacatgtaaaatattacaaaatgttagacaaacc 8140566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12189597 - 12189769
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| |||||| ||| ||||||   ||| ||||||| ||||| |||||||||||  |  |||| | ||| ||||||    
T  12189597 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatataaattttttgaataaataattg 12189696  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||  |||||||  |||||||| |||| ||||||   ||||||||||||||  | ||||||||| |||||||||    
T  12189697 ttgtttttcaagaaaaagttaatactcttagttgttttaacatgtgcaatgctgcacatgttaaacaaaccca 12189769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12434025 - 12434197
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| |||||| ||| ||||||   ||| ||||||| ||||| |||||||||||  |  |||| | ||| ||||||    
T  12434025 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatataaattttttgaataaataattg 12434124  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||  |||||||  |||||||| |||| ||||||   ||||||||||||||  | ||||||||| |||||||||    
T  12434125 ttgtttttcaagaaaaagttaatactcttagttgttttaacatgtgcaatgctgcacatgttaaacaaaccca 12434197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 83 - 176
Target Start/End: Original strand, 13496823 - 13496917
Alignment:
Q  83 tttttagtaattaattgttagttttcaatgaaaagttactactttt-agtttccttaacatgtgcaatattacacatgttagacaaacccaaaaa 176  Q
    |||||| ||| ||||||||  ||||||||| |||||||||| |||| |||| | ||||||||||||||||| |||||||||||||||||||||||    
T  13496823 tttttaataaataattgttctttttcaatgtaaagttactattttttagttcctttaacatgtgcaatattgcacatgttagacaaacccaaaaa 13496917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 39703529 - 39703455
Alignment:
Q  94 taattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    |||||||| ||||| || ||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||    
T  39703529 taattgttggtttttaacgaaaagttactacttttagttaccttaacatgtgcaatattgcacacgttagacaaa 39703455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 43717561 - 43717734
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||||| |||||| || |||  ||||| ||||| | | |||||||||||||| |||||||||||||   ||||| ||  || |||    
T  43717561 tcatgtgcaaatttacacatgttaagaatttcaaaaaagtaagtttgaatgggaacttgtgcatttagtattaaatatgtatcattttaatagatacttg 43717660  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    ||  ||||| || ||||||    |||||||||| | ||||||||||||| ||| ||||||||||||||||||||    
T  43717661 ttgtttttccataaaaagtgttcacttttagttgctttaacatgtgcaacattgcacatgttagacaaacccaa 43717734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 9580118 - 9580290
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||||| |||||| |||||| ||| || ||||  ||||||||||| ||||| |||||||||||     |||| | ||| ||||||    
T  9580118 tcatgtgcaaatttacacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataatttttttgaataaataattg 9580217  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||  ||| |||  ||||||||||||| ||||||   |||||||||||||| || ||||| |||||||||||||    
T  9580218 ttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatattagacaaaccca 9580290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 33514613 - 33514680
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  33514613 ttttcaataaaaggttgctacttttagtttccttaacatgtgcaatattgcacatgttaggcaaaccc 33514680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 38843873 - 38843702
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||||||||| |||||| |||||| ||  || |||   ||| ||||||| |||||| ||||||||||  || |||| | ||| ||||||    
T  38843873 tcatgtgtaaatttgcacatgctaagaagtttaaaatataaattttttattggaacttgtacatttaatattaaatataaaacttttgaataaataattg 38843774  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||| |||  ||||||||||||| ||||||   |||||||||||||| || ||||||||||||||||||    
T  38843773 ttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 38843702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 45519578 - 45519651
Alignment:
Q  8 caaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgta 80  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||   |||||||||||||||||    
T  45519578 caaatttgcacatgataagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgta 45519651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 7750734 - 7750667
Alignment:
Q  103 gttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    ||||||||| ||||||| ||||||||||||   ||||||||||||||||| |||||||||||||||||    
T  7750734 gttttcaataaaaagttgctacttttagttgttttaacatgtgcaatattgcacatgttagacaaacc 7750667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 29642772 - 29642639
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg--catttatattaaatatgtaaatttttagtaattaatt 98  Q
    ||||||||||||||||| |||||||| |||||||| | |||| |||| |||||||||||||    |||||||||||||   || |||||| ||| |||||    
T  29642772 tcatgtgcaaatttgcatatgataaggaatttaaaatggtaagtttgtcttgaaacttgtgtttttttatattaaatagacaactttttaataa-taatt 29642674  T
Q  99 gttagttttcaatgaaaagttactacttttagttt 133  Q
    | |  ||||||||||||||||||||| ||| ||||    
T  29642673 ggtgtttttcaatgaaaagttactacatttggttt 29642639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 172
Target Start/End: Complemental strand, 45006132 - 45005967
Alignment:
Q  7 gcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcat-ttatattaaatatgtaaatttttagtaattaattgttagtt 105  Q
    ||||||||||||||| |||||| |||||| ||| || ||||  ||| ||| ||| ||| | |||||||||||  || |||| | ||| ||||||||  ||    
T  45006132 gcaaatttgcacatgttaagaagtttaaaatag-aattttgtattggaacatgtacatctaatattaaatataaaacttttgaataaataattgttgttt 45006034  T
Q  106 ttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    | |||  ||||||||||||| ||||||   |||||||||||||| || |||||||||||||||||||    
T  45006033 tccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaaccca 45005967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 35745991 - 35746068
Alignment:
Q  94 taattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||||||| |||||||||||||||||| | ||||||||| | ||||||  | ||||||| ||||||||||||||||||    
T  35745991 taattgtttgttttcaatgaaaagttatttcttttagttactttaacaatttcaatattgcacatgttagacaaaccc 35746068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 7393254 - 7393369
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||| |||||||||||| ||| ||||||||| |||||| |||| |||| |||||||| | |||||||||||||| ||| |||||| ||| ||||||    
T  7393254 tcatgtgcgaatttgcacatgttaaaaaatttaaaatagtaa-tttgtcttgtaacttgtgtattttatattaaatatataactttttaataaataattg 7393352  T
Q  100 ttagttttcaatgaaaa 116  Q
     |  ||||||| |||||    
T  7393353 gtgtttttcaacgaaaa 7393369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 14961672 - 14961760
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaattttta 88  Q
    ||||||||||||||||||||| |||||| |||||| |||||| ||||  ||| |||||||||| |||| ||||||||| ||| ||||||    
T  14961672 tcatgtgcaaatttgcacatgctaagaagtttaaaatagtaattttgtattggaacttgtgcattttaaattaaatatttaacttttta 14961760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 171
Target Start/End: Original strand, 38047949 - 38048114
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattgtt 101  Q
    ||||||||||||||||||| |||| |||||||| | ||||||||| |||| || ||||| | ||||| ||||||||  |  |||||| ||| |||||| |    
T  38047949 atgtgcaaatttgcacatgttaagtaatttaaa-tggtaactttgtcttggaatttgtgtattttatcttaaatatacatttttttaataaataattggt 38048047  T
Q  102 agttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
      || | ||||||||||||||| |||||||| | ||| |||||   ||||| || |||||||||||||||    
T  38048048 gtttgtgaatgaaaagttactatttttagttactttagcatgt---atattgcatatgttagacaaaccc 38048114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 16832429 - 16832499
Alignment:
Q  103 gttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    ||||| ||| ||||||| || |||||||| |||||||||||||||||| | |||||| |||||||||||||    
T  16832429 gtttttaataaaaagttgcttcttttagtatccttaacatgtgcaatactgcacatgatagacaaacccaa 16832499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 44222514 - 44222611
Alignment:
Q  71 taaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    ||||||| || ||||||| ||| |||||||| ||||| ||| ||||| |  || |||||||| | |||||||||||||||||||| |||||||||||||    
T  44222514 taaatatatacatttttaataaataattgtt-gtttttaataaaaagatgttagttttagttgctttaacatgtgcaatattacatatgttagacaaac 44222611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 31451485 - 31451433
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg 61  Q
    |||||||||| || |||||| ||||||||||||||||| ||||||||||||||    
T  31451485 aaatttgcacgtgttaagaagtttaaagtagtaactttaacttgaaacttgtg 31451433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 173
Target Start/End: Complemental strand, 34249809 - 34249673
Alignment:
Q  39 gtaactttgacttgaaacttgtgcattt-atattaaatatgtaaattttt-agtaattaattgttagttttcaatgaaaagttactacttttagtttcct 136  Q
    |||| |||| |||| |||||||| |||| ||||||||||| ||| ||||| | ||| |||||  |  ||||||||||||| ||| ||||||||| |  ||    
T  34249809 gtaagtttgtcttggaacttgtgtattttatattaaatatttaacttttttaataaataattagtgtttttcaatgaaaaattaatacttttagctgtct 34249710  T
Q  137 taacatgtgcaatattacacatgttagacaaacccaa 173  Q
    || ||||| ||| ||| ||||||||||||||||||||    
T  34249709 tatcatgtacaacattgcacatgttagacaaacccaa 34249673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 38212953 - 38213125
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcat-ttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| ||| || |||   ||||||||||| ||| | |||||||||||  || |||| | | | ||||||    
T  38212953 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattgaaacttgtacatgtaatattaaatataaaacttttaaatgaataattg 38213052  T
Q  100 ttagttttcaatgaaa-agttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
     |  |||||||  ||| |||||| ||| ||||||   |||||||||||||| || ||||||||| ||||||||    
T  38213053 ctgtttttcaaaaaaacagttaccactattagttgttttaacatgtgcaatgttgcacatgttaaacaaaccc 38213125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 163
Target Start/End: Original strand, 10974627 - 10974726
Alignment:
Q  64 tttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttag 163  Q
    |||||||||||||||||| |||||| ||| || || ||  |||||||| ||| |||||||||||||||| | ||||||| | ||||| | || |||||||    
T  10974627 tttatattaaatatgtaattttttaataaatagttattgtttttcaataaaatgttactacttttagttgctttaacatatacaatagtgcatatgttag 10974726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 11117131 - 11117178
Alignment:
Q  125 ttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||    
T  11117131 ttttagttgctttaacatgtgcaatattgcacatgttagacaaaccca 11117178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 37389509 - 37389443
Alignment:
Q  23 taagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaattttta 88  Q
    ||||||||||||| || ||||||||  ||||||||||| || ||||||||||||||||| |||||||    
T  37389509 taagaaatttaaattaataactttgttttgaaacttgttcattttatattaaatatgtagattttta 37389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 45518121 - 45518063
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttg 59  Q
    ||||||||||||||| |||| ||||||| |||||| |||||||||| |||| |||||||    
T  45518121 tcatgtgcaaatttgtacataataagaagtttaaactagtaactttaacttaaaacttg 45518063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 28014867 - 28014944
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatat 77  Q
    ||||||||||||||||||||| |||||| |||||| ||| || ||||  ||| ||||||| ||||| |||||||||||    
T  28014867 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatat 28014944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 10543741 - 10543801
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  10543741 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 10543801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 16586834 - 16586894
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  16586834 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 16586894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 42781540 - 42781480
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  42781540 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 42781480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 45516390 - 45516316
Alignment:
Q  66 tatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacat 142  Q
    |||||||||||||||  |||| | ||| ||||||||||||| |||| ||||||||||||||||||||  ||||||||    
T  45516390 tatattaaatatgtagcttttaa-taaataattgttagttt-caataaaaagttactacttttagttatcttaacat 45516316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 297258 - 297199
Alignment:
Q  7 gcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt 66  Q
    ||||||||||||||| |||||| |||||| || ||||||||  ||||||||||| |||||    
T  297258 gcaaatttgcacatgttaagaagtttaaaataataactttgtattgaaacttgtacattt 297199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 9825024 - 9824957
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||||||| ||||||||||| ||||| || | ||||||| | ||||||| || |||||||||||||||    
T  9825024 ttttcaataaaaagttactaattttaattgcattaacatatacaatattgcatatgttagacaaaccc 9824957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 12958568 - 12958529
Alignment:
Q  136 ttaacatgtgcaatattacacatgttagacaaacccaaaa 175  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  12958568 ttaacatatgcaatattacacatattagacaaacccaaaa 12958529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15198909 - 15198968
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgt 60  Q
    ||||||||||||||||||||| ||| |||||| || |||||||||||  ||| |||||||    
T  15198909 tcatgtgcaaatttgcacatgttaaaaaattttaaatagtaactttgcattgtaacttgt 15198968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 31261910 - 31261863
Alignment:
Q  122 tacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    ||||||||||| | |||||||||||||||||| | |||||||||||||    
T  31261910 tacttttagttgctttaacatgtgcaatattaaaaatgttagacaaac 31261863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 27874690 - 27874767
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatat 77  Q
    ||||||||||||||||||||| |||||| |||||| ||  || ||||  ||| ||||||| ||||| |||||||||||    
T  27874690 tcatgtgcaaatttgcacatgttaagaagtttaaaatacaaattttgtattggaacttgtacatttaatattaaatat 27874767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 32089480 - 32089577
Alignment:
Q  6 tgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgta-aatttttagtaattaattgtt 101  Q
    |||||||||||||||| |||| | |||||| ||||||  ||   | |||||||||||| ||||||||| ||||||| |||||||| ||| ||||||||    
T  32089480 tgcaaatttgcacatgttaagcagtttaaaatagtaagattttatcgaaacttgtgcactttatattatatatgtataatttttaataaataattgtt 32089577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 42306 - 42350
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaa 148  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||    
T  42306 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaa 42350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 11923048 - 11923012
Alignment:
Q  136 ttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  11923048 ttaacttgtgcaatattgcacatgttagacaaaccca 11923012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 40716321 - 40716273
Alignment:
Q  123 acttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||||||||   ||||||||||||||||| ||||||||||| ||||||    
T  40716321 acttttagttagattaacatgtgcaatattgcacatgttagataaaccc 40716273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 1e-79; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 11636900 - 11636730
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttatattaaatatgtaaatttttagtaattaattgt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11636900 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgcatttatattaaatatgtaaatttttaataattaattgt 11636801  T
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    | |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  11636800 tggttttcaatgaaaagttactacttttagtttctttaacatgtgcaatattgcacatgttagacaaaccc 11636730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 8103589 - 8103760
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||| ||||||| ||||||||||    
T  8103589 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaattg 8103688  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    || | ||||||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  8103689 tt-ggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaatccca 8103760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 16174631 - 16174764
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttatattaaatatgtaaatttttagtaattaattgt 100  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  16174631 tcatttgcaaatttgcacatcataagaaatttaaagtagtaactttgaattgaaacttgtgcatttatattaaatatgtaagtttttaataattaattgt 16174730  T
Q  101 tagttttcaatgaaaagttactacttttagtttc 134  Q
    | ||||||||||||||||||||||||||||||||    
T  16174731 tggttttcaatgaaaagttactacttttagtttc 16174764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 2795692 - 2795522
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||  |||  |||||||||||||| |||| |  ||| |||||    
T  2795692 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaat-aattg 2795594  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  2795593 ttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 2795522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 44 - 171
Target Start/End: Original strand, 5958176 - 5958303
Alignment:
Q  44 tttgacttgaaacttgtgcatttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatg 143  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||||||||| ||||||||    
T  5958176 tttgacttgaatcttgtgcatttatattaaatatgtaaatttttaataattaattgttgattttcaatgaaaaattactacttttagtttctttaacatg 5958275  T
Q  144 tgcaatattacacatgttagacaaaccc 171  Q
    || |||||| ||||||||||||||||||    
T  5958276 tgtaatattgcacatgttagacaaaccc 5958303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 15191034 - 15190864
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt--atattaaatatgtaaatttttagtaattaattgttagttt 106  Q
    ||||||||||||| |||||| ||||||||||||| ||||||||||||||||||  |||  ||||||||||||||| |||| |  ||| ||||||| ||||    
T  15191034 aaatttgcacatgttaagaagtttaaagtagtaattttgacttgaaacttgtgtttttttatattaaatatgtaacttttaatcaat-aattgtttgttt 15190936  T
Q  107 tcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaaaatt 178  Q
    |||||||||| |||||||||||| || ||||||||| ||||||||| |||||||||||||||||||| ||||    
T  15190935 tcaatgaaaaattactacttttacttaccttaacatatgcaatattgcacatgttagacaaacccaataatt 15190864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 14 - 168
Target Start/End: Complemental strand, 9184363 - 9184209
Alignment:
Q  14 tgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatg 112  Q
    |||||||| |||||| ||||||||||||||||| ||||| ||||||||  ||| ||||||||||||||  |||||| | | ||||| || ||||||||||    
T  9184363 tgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtag-tttttaatcaataattattggttttcaatg 9184265  T
Q  113 aaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9184264 aaaagttactacttttagttaccttaacatgtgcaatattacacatgttagacaaa 9184209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 30839950 - 30839780
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||  ||| ||||||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  30839950 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 30839851  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||| |||| |||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  30839850 ttggttt-caataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 30839780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 36597748 - 36597578
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||  ||| ||||||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  36597748 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 36597649  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||| |||| |||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  36597648 ttggttt-caataaaaatttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 36597578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 4047581 - 4047412
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||   |||||||||||||||| |  ||||| | |  |||||    
T  4047581 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgt-agcttttaatcaacaattg 4047483  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    || |||||||||||||||||||||||||||||| ||||||||| |||||||||  | |||||||| |||||    
T  4047482 ttggttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgtatatgttagataaacc 4047412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 12642004 - 12642170
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgtt 101  Q
    ||||||||||||||||||| |||||| |||||| || ||||||||| ||| ||||||||  ||| |||||||||||||||  ||| |   || |||||||    
T  12642004 atgtgcaaatttgcacatgttaagaagtttaaattaataactttgatttggaacttgtgttttttatattaaatatgtaacatttaaacgat-aattgtt 12642102  T
Q  102 agttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
     |||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  12642103 ggttttcaatgaaaaattactacttttagttgccttaacatgtacaatattgcacatgttagacaaac 12642170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 30328345 - 30328506
Alignment:
Q  10 aatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttc 108  Q
    |||||||||||| |||||| ||||||||||||||||| ||||| ||||||||  ||| ||||||||||||||  |||| |  ||| ||||||| |||||     
T  30328345 aatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaat-aattgttggttttt 30328443  T
Q  109 aatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||||||| | |||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  30328444 aatgaaaaatgactacttttagttatcttaacatgtgcaatattgcacatgttagacaaaccc 30328506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 31365959 - 31366131
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||| ||||| |||||| |||||| |||||||||||||||| ||||||||  ||| |||||||||||||||  ||| |  ||| |||||    
T  31365959 tcatgtgcaaatttgtacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatttaatcaat-aattg 31366057  T
Q  100 ttagttttcaatgaaaa--gttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || ||||||||| ||||  |||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||    
T  31366058 ttggttttcaataaaaaaagttactacatttagctaccttaacatgtgcaatattgcacatgttagacaaaccc 31366131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 28630043 - 28629896
Alignment:
Q  5 gtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttag 103  Q
    |||||||||||||||||||||||| ||||||||| || |||| |||||| |||||||  ||| ||||||||||||||| |||| | ||| |||||||| |    
T  28630043 gtgcaaatttgcacatgataagaagtttaaagtaatatctttaacttgagacttgtgttttttatattaaatatgtaacttttaa-taaataattgttgg 28629945  T
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt 152  Q
    ||||||||||||||||| || |||||||| | |||||||||||||||||    
T  28629944 ttttcaatgaaaagttattatttttagttgctttaacatgtgcaatatt 28629896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 34578180 - 34578009
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||| || |||||| |||||||||| |||| ||||||||   ||| ||||||||||||||  |||| |  ||  |||||    
T  34578180 tcatgtgcaaatttgcacatgttaaaaagtttaaaatagtaactttaacttaaaacttgtattttttatattaaatatgtagcttttaatcaac-aattg 34578082  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||  ||||||||||||| ||| ||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  34578081 ttgattttcaatgaaaaattattacttttagttaccttaacatgtggaatattgcacatgttagacaaaccca 34578009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 10664986 - 10665144
Alignment:
Q  13 ttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaat 111  Q
    ||||||||  ||||||||||||| | |||| |||| |||| |||||||| |||  ||||||||| | ||| |||||| ||| |||||  || ||||||||    
T  10664986 ttgcacatcttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattgcatattaaatttataactttttaataaataattaata-ttttcaat 10665084  T
Q  112 gaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  10665085 gaaaagttattacttttagttaccttaacatgtgcaatattacacatgttggacaaaccc 10665144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 32019993 - 32020161
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatt-tatattaaatatgtaaattttt-agtaattaatt 98  Q
    ||||||||||||||||||||| ||||||||||||| | |||| |||| |||| |||||||| ||| |||||||||||  ||| ||||| | |||| |||     
T  32019993 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattctatattaaatagataacttttttaataat-aatc 32020091  T
Q  99 gttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    | |  ||||||| ||||||||||||  |||||||||||||||| |||||||||| |||||||||||||||    
T  32020092 ggtgtttttcaaagaaaagttactagatttagtttccttaacaagtgcaatattgcacatgttagacaaa 32020161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 13515935 - 13516106
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatt-tatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||||||||| ||| ||||||||||| | || |||  |||||||||| |  ||| |||||||||||  ||| |||||| |||| |||||    
T  13515935 tcatgtgtaaatttgcacatgttaacaaatttaaagtggaaagtttatcttgaaacttatatattctatattaaatagataattttttaataat-aattg 13516033  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
     || ||| ||||| |||||| |||| ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  13516034 atattttccaatgcaaagttgctacatttagtttccttaacatgtgcaatattacacatattagataaaccca 13516106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 11376129 - 11375972
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaa-cttgtg-catttatattaaatatgtaaatttttagtaattaatt 98  Q
    ||||||| ||||||  ||||||||| || ||||||||||||||||||||||||||  |||||   |||||||||||||||| |  ||||| ||| |||||    
T  11376129 tcatgtgtaaatttatacatgataaaaagtttaaagtagtaactttgacttgaaattttgtgttttttatattaaatatgt-agcttttaataaataatt 11376031  T
Q  99 gttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacaca 157  Q
     ||  ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  11376030 attgattttcaatgaaaagttactacttttagttgctttaacatgtgcaatattgcaca 11375972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 40513120 - 40512945
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    |||||| |||||||||||||| ||| ||||||||| |||||||||||  ||| || |||   ||||  ||| |||||| ||| |||||  ||| ||||||    
T  40513120 tcatgtacaaatttgcacatgttaaaaaatttaaaatagtaactttgcattggaatttgaatattttgtatcaaatatataactttttgttaaataattg 40513021  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaaaa 176  Q
    || | ||||||| |||| ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| |||||    
T  40513020 tt-gatttcaataaaaacttactacttctagttaccttaacatgtgcaatattgcacatgttagacaaaccaaaaaa 40512945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 41350371 - 41350244
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgc-atttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||||  |||||||||||||||| || ||||| ||| ||||||    
T  41350371 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttggaacttgtgctttttatattaaatatgt-aacttttaataaataattg 41350273  T
Q  100 ttagttttcaatgaaaagttactactttt 128  Q
    ||  |||||| || ||| ||| |||||||    
T  41350272 ttgattttcagtgcaaaattaatactttt 41350244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 3398389 - 3398216
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| ||| || ||||  ||| ||||||| ||||| |||||||||||  || |||| | ||| |||||     
T  3398389 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaataaataatt- 3398291  T
Q  100 ttagtttt-caatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
     ||||||| |||  ||||||||||||| ||||||   |||||||||||||| || ||||||||||||||||||||    
T  3398290 atagttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaacccaa 3398216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 6863725 - 6863584
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||   ||| ||||||  || ||| |||||||||| ||| |||||| ||| ||||||    
T  6863725 tcatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttatattggaacttgaacattttgtattaaatatataactttttattaaataattg 6863626  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacat 142  Q
    || | ||||||| |||| || |||||||||||| |||||||||    
T  6863625 tt-ggtttcaataaaaacttgctacttttagttaccttaacat 6863584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 172
Target Start/End: Original strand, 18841717 - 18841886
Alignment:
Q  4 tgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgtta 102  Q
    |||||||||||||| ||| ||| || |||||| ||| || ||||  |||||| |||| |||||| ||||||||||  || |||| | ||| ||||||||     
T  18841717 tgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaatttgtacatttaatattaaatataaaacttttgaataaataattgttg 18841816  T
Q  103 gttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
     ||| |||  ||||||||||||| ||||||   |||||||||||||| || |||||||||||||||||||    
T  18841817 ttttccaaaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaaccca 18841886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 24329657 - 24329813
Alignment:
Q  14 tgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattgttagttttcaatg 112  Q
    |||||||| ||| || |||||||| |||||||||||||| ||||||| || ||||||||||||| |||  |||| | ||| ||| ||||  ||||||||     
T  24329657 tgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtacattttatattaaataggtatcttttaaataaataaatgttgtttttcaatt 24329756  T
Q  113 aaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    |||| ||||||||||||| |  |||||||||  |||| || |||||||||||||||||    
T  24329757 aaaaattactacttttagatatcttaacatgcacaat-ttgcacatgttagacaaacc 24329813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 15240959 - 15241092
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcat-ttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||| ||||| ||| || || ||| || ||| ||||  |||||| |||||||| ||||||||||||| ||| |||||| ||| ||||||    
T  15240959 tcatgtgcaaatttgtacatgttaaaaagttcaaaatattaaatttgtattgaaatttgtgcatgttatattaaatatataattttttaataaataattg 15241058  T
Q  100 ttagttttcaatgaaaagttactacttttagttt 133  Q
    ||  |||||||||||| | ||||| |||||||||    
T  15241059 ttgtttttcaatgaaatgatactatttttagttt 15241092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 35469723 - 35469551
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaa-ctttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaatt 98  Q
    ||||||| ||||||||||||| ||| ||||||||| |||||| |||| | ||| |||| ||  |||| ||||||||||| ||| |||||  ||||| |||    
T  35469723 tcatgtgtaaatttgcacatgttaaaaaatttaaaatagtaagctttta-ttggaactagtttattttatattaaatatataactttttcttaattgatt 35469625  T
Q  99 gttagttttcaatgaaaag-ttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||  |||||||| ||||  || |||||||||||| | |||||||||||| || | ||||||||||||||||||    
T  35469624 gttgtttttcaataaaaaaattgctacttttagttactttaacatgtgcactaattcacatgttagacaaaccc 35469551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14466503 - 14466583
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgta 80  Q
    ||||||||||||||  ||||| |||||| ||||||||||||||||| ||||||||||||||   |||||||||||||||||    
T  14466503 tcatgtgcaaatttagacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgta 14466583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 31567500 - 31567632
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||| |||||||||||||||| ||| ||||||||| | |||| |||| ||||||| |||| || |||||||||||||||||  |||||| | | |||||     
T  31567500 tcatatgcaaatttgcacatgttaaaaaatttaaaatggtaattttgtcttgaaatttgttcattttatattaaatatgtagttttttaatgaataatta 31567599  T
Q  100 ttagttttcaatgaaaagttactacttttagtt 132  Q
    ||  |||||||| ||||||||||  ||||||||    
T  31567600 ttgtttttcaataaaaagttactctttttagtt 31567632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30893798 - 30893741
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaactt 58  Q
    ||||||||||||||||||||| |||||| |||||| ||||||||||||||| ||||||    
T  30893798 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgacttaaaactt 30893741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 11249967 - 11250136
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    |||||| |||||||| |||| || ||||  ||||| |||||||||||  ||||||| ||| |||||  ||||||| || ||| || ||| ||| ||||||    
T  11249967 tcatgtacaaatttgtacat-attagaagattaaaatagtaactttgcattgaaacatgtacattttgtattaaacatataatttattactaaataattg 11250065  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  || ||| | |||| || |||||||||||| | ||||||||||||||||| ||||||||| ||||||||    
T  11250066 ttgtttatcatt-aaaacttgctacttttagttgctttaacatgtgcaatattgcacatgttaaacaaaccc 11250136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 29628500 - 29628671
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgc-atttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||| ||||||||| ||| || ||| ||||||||| || ||| ||||  ||||| ||  ||| ||||| |||||||||  ||||||||| ||||| ||||    
T  29628500 tcatatgcaaatttacacgtgttaataaatttaaaataataaatttgttttgaatctcatgccatttacattaaatatacaaatttttaataattgattg 29628599  T
Q  100 ttagttttcaatgaaaag-ttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    ||| |||||||| ||||  ||  || |||||||||  ||| ||||||||||||| |||||| ||||||||||    
T  29628600 ttatttttcaataaaaaaattgttaattttagtttatttagcatgtgcaatattgcacatgctagacaaacc 29628671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 24014697 - 24014866
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||||||||| ||| || ||| || |||||||||    |||||||||||  ||||  |||||||||| ||  ||||| |||| || ||     
T  24014697 tcatgtgaaaatttgcacatgttaaaaagttttaaatagtaacttcacattgaaacttgtatattttgtattaaatatatatctttttggtaaata-tta 24014795  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    |||||||| ||| |||| ||  |||||||||||   |||||||||||||| || |||||||||||||||||    
T  24014796 ttagttttgaataaaaactttatacttttagttgttttaacatgtgcaatgttgcacatgttagacaaacc 24014866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 15241226 - 15241274
Alignment:
Q  125 ttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||||    
T  15241226 ttttagtttctttaacatgtgcaatattgcatatgttagacaaacccaa 15241274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 40166299 - 40166244
Alignment:
Q  122 tacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaaaat 177  Q
    |||||||||||   ||||||||||||||| | ||||||||||||||||||||||||    
T  40166299 tacttttagttgttttaacatgtgcaatactccacatgttagacaaacccaaaaat 40166244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 13761736 - 13761667
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || ||||||||||| ||| ||||    
T  13761736 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttagaaaaatccaa 13761667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 31613261 - 31613330
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || ||||||||||| ||| ||||    
T  31613261 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttagaaaaatccaa 31613330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 171
Target Start/End: Original strand, 10658363 - 10658467
Alignment:
Q  64 tttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttag 163  Q
    |||||||||||||| ||| |||||| |||  ||||  || ||||||||| |||||| |||||||||||| | ||| |||||| |||||  |||||||||     
T  10658363 tttatattaaatatataa-tttttaataaagaatt--tatttttcaatgtaaagttgctacttttagttcctttatcatgtgtaatatcgcacatgttaa 10658459  T
Q  164 acaaaccc 171  Q
    ||||||||    
T  10658460 acaaaccc 10658467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 12332403 - 12332343
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  12332403 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 12332343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 31704995 - 31704935
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  31704995 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 31704935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 40454127 - 40454067
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  40454127 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 40454067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 171
Target Start/End: Original strand, 14466634 - 14466669
Alignment:
Q  136 ttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||||||||||||||| ||||||||||||||||||    
T  14466634 ttaacatgtgcaatattgcacatgttagacaaaccc 14466669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 16160924 - 16160885
Alignment:
Q  136 ttaacatgtgcaatattacacatgttagacaaacccaaaa 175  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  16160924 ttaacatgtgcaatattacacatgttttacaaacccaaaa 16160885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 11692758 - 11692808
Alignment:
Q  118 ttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    |||||||||||||||   |||||||||||||||||  ||||||||||||||    
T  11692758 ttactacttttagttattttaacatgtgcaatattgtacatgttagacaaa 11692808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 18150435 - 18150377
Alignment:
Q  113 aaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||| ||| |||||||| | || ||||||| ||||||||| ||||||||||||||||||    
T  18150435 aaaacttattacttttaatatctttaacatatgcaatattgcacatgttagacaaaccc 18150377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 33072727 - 33072677
Alignment:
Q  119 tactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    ||||||||||||||   ||||||||||||||||| ||||||||| ||||||    
T  33072727 tactacttttagttgatttaacatgtgcaatattgcacatgttaaacaaac 33072677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 34903459 - 34903409
Alignment:
Q  15 gcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatt 65  Q
    |||| |||||||||| ||||||||||||||||  ||||||| |||||||||    
T  34903459 gcacttgataagaaacttaaagtagtaactttatcttgaaaattgtgcatt 34903409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 2e-59; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 39869276 - 39869121
Alignment:
Q  15 gcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaa 114  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  39869276 gcacatgataagaagtgtaaagtagtaa-tttgacttgaaacttgtgcatttatattaaatatgtaaatttttaataattaattgttggttttcaatgaa 39869178  T
Q  115 aagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||||||| |||||||||| ||||||||||||||||| || |||||||||||||||    
T  39869177 aagttactatttttagtttctttaacatgtgcaatattgcatatgttagacaaaccc 39869121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 19889509 - 19889339
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  ||| ||||||||||||||| |||| | ||| ||||||    
T  19889509 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaa-taaataattg 19889411  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  19889410 ttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaaccc 19889339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 7170171 - 7170005
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||| ||||||| ||||||||||    
T  7170171 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaattg 7170072  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaa 167  Q
    || | ||||||| ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  7170071 tt-ggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 7170005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23982764 - 23982935
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| ||| |||||| ||||||||||    
T  23982764 tcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaatatttaagtttttaataattaattg 23982863  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || ||||| |||||||||||||||||||||||| |||||||||||  |||||| ||||||||||||||||||    
T  23982864 ttggttttgaatgaaaagttactacttttagttgccttaacatgtataatattgcacatgttagacaaaccc 23982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 5909291 - 5909461
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||||||  |||| | ||| ||||||    
T  5909291 tcatgtgtaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtagcttttaa-taaataattg 5909389  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  5909390 ttggttttcaatgaaaagttactgcttttagttgccttaacatgtgcaatattgcacatgttagtcaaaccc 5909461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 9332130 - 9331960
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||  ||| |||||||||||||||  ||| |  ||| |||||    
T  9332130 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaacatttaatcaat-aattg 9332032  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  9332031 ttgattttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 9331960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 12085940 - 12086109
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||| ||||||| ||||||  ||||| ||||||||||||||||||  ||| ||||||||||| ||| |||| | ||| ||||||    
T  12085940 tcatgtgcaaatttgcacataataagaagtttaaataagtaattttgacttgaaacttgtgttttttatattaaatatttaacttttaa-taaataattg 12086038  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    ||  ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12086039 ttgattttcaacgaaaagttactacttttagttgccttaacatgtgcaatattacacatgttagacaaacc 12086109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 39757119 - 39757287
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||| |||||||| |||||  ||| ||||||||||||||  |||| |  ||| |||||    
T  39757119 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaacttgaaatttgtgttttttatattaaatatgtagcttttaatcaat-aattg 39757217  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    ||  ||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  39757218 ttgattttcaatgaaaaattactacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 39757287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 3561887 - 3562054
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||| |||| |||||||||  ||| ||||||||||||||  |||| |  ||| ||||     
T  3561887 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttatattaaatatgtagcttttaatcaat-aatta 3561985  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    ||  ||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||    
T  3561986 ttgattttcaatgaaaagttactgcttttagttaccttaacatgtgcaatattgcacatgttagacaaa 3562054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 36548469 - 36548636
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgt-gcatttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| ||||||||||||||| ||| ||||    |||||||||||||||| ||| |||| | | ||||||    
T  36548469 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttaaaatttgtattttttatattaaatatgt-aatatttaatcaataattg 36548567  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    || ||||||||| |||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  36548568 ttggttttcaataaaaaattactacttttagttcccttaacatgtgcaatattgcacatgttagacaaa 36548636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 24462964 - 24463140
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| || |||||||||||| ||  |||| ||||| ||||||||||||||  |||||| ||| || |||    
T  24462964 tcatgtgcaaatttgcacatgttaagaagtttaaaataataactttgacttaaagtttgtacattttatattaaatatgtagttttttaataaatacttg 24463063  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaaaat 177  Q
    || ||||||||| | || ||||||||||||||| |||||||||||| |||||| ||||||||||||||||||| ||||    
T  24463064 tt-gttttcaataagaaattactacttttagttgccttaacatgtgaaatatttcacatgttagacaaacccataaat 24463140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 33343157 - 33342987
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||  ||| ||||||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  33343157 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtattggaacttgaacattttgtattaaatatataactttttgttaaataattg 33343058  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||| |||| |||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  33343057 ttggttt-caataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 33342987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 46290179 - 46290008
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||  ||| ||||||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  46290179 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 46290080  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    || |||| |||| |||| || |||||||||||| |||||||||||||||| || |||||||||||||||||||    
T  46290079 ttggttt-caataaaaacttgctacttttagttaccttaacatgtgcaattttgcacatgttagacaaaccca 46290008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 47457470 - 47457638
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||| || || |||| ||||||||| || ||||  |||| | ||| ||||||    
T  47457470 tcatgtgcaaatttgcacatgttaaaaaatttaaagtagtaactttgacttggaatttatgcattttatattatatgtgtagcttttaaataaataattg 47457569  T
Q  100 ttagttttcaat-gaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    ||| ||||||||  |||| |||||||||||||||   ||||||||||||||||| |||||||||||||||    
T  47457570 tta-ttttcaataaaaaaattactacttttagttgttttaacatgtgcaatattgcacatgttagacaaa 47457638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 32117983 - 32117813
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatt-tatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||||| | || |||  ||||||||||||  ||| |||||||||||  ||| |||||| |||| |||||    
T  32117983 tcatgtgcaaatttgcacatgttaagaaatttaaagtggcaagtttatcttgaaacttgtatattctatattaaatagataactttttaataat-aattg 32117885  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
     |  ||| ||||| |||||| |||| ||||||||||||||||||||||||||| ||||||||||| ||||||    
T  32117884 gtgttttccaatgcaaagttgctacatttagtttccttaacatgtgcaatattgcacatgttagataaaccc 32117813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 47120232 - 47120374
Alignment:
Q  30 tttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactactttt 128  Q
    |||||| |||||||||||||||| ||||||||  ||| |||||||||||||||  ||| |  ||| ||||||| |||||||||||||| |||||||||||    
T  47120232 tttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatttaatcaat-aattgttggttttcaatgaaaaattactactttt 47120330  T
Q  129 agtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    |||| || |||||||||||||||| |||||||||||||||||||    
T  47120331 agttaccataacatgtgcaatattgcacatgttagacaaaccca 47120374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 24250417 - 24250312
Alignment:
Q  65 ttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  24250417 ttatattaaatatgtagcttttaa-taaataattgttggttttcaatgaaaagttaatacttttagtttccttaacatgtgcaatattgcacatgttaga 24250319  T
Q  165 caaaccc 171  Q
    |||||||    
T  24250318 caaaccc 24250312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 25709408 - 25709577
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||  ||| ||||||| ||||| |||||||||| |||  |||||| ||| | ||||    
T  25709408 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtattggaacttgttcatttcatattaaataggtagctttttaataaattattg 25709507  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    ||  || ||||| |||| |||||||||||||||   ||||||||||||||||| ||||||||||| ||||    
T  25709508 ttgtttatcaataaaaaattactacttttagttgatttaacatgtgcaatatttcacatgttagaaaaac 25709577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 41331465 - 41331545
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgta 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  41331465 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatatgta 41331545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 34270430 - 34270264
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||  ||| ||||||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  34270430 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 34270331  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||| |||| |||| ||    ||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  34270330 ttggttt-caataaaaactt----cttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 34270264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 39 - 169
Target Start/End: Complemental strand, 19868245 - 19868114
Alignment:
Q  39 gtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttcctt 137  Q
    |||| |||| ||||||||||||| |||| ||||||||||| ||| |||||  ||| |||||| |  ||||||||||||| |||||||||||||||  |||    
T  19868245 gtaagtttgtcttgaaacttgtgtattttatattaaatatataactttttgataaataattggtgtttttcaatgaaaatttactacttttagttgtctt 19868146  T
Q  138 aacatgtgcaatattacacatgttagacaaac 169  Q
    ||||||||||||||| ||||||||||||||||    
T  19868145 aacatgtgcaatattgcacatgttagacaaac 19868114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 12650986 - 12650819
Alignment:
Q  4 tgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgtta 102  Q
    ||||| || ||||||||| ||||||||||||| | |||| |||| ||||||||||  | |||| || ||||| || ||| |||||| ||| |||||| ||    
T  12650986 tgtgctaaattgcacatgttaagaaatttaaaatggtaagtttgtcttgaaacttcagtattttatgttaaa-atataactttttaataaataattggta 12650888  T
Q  103 gttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||||||||||||||||||| ||||||||  |||||||||| ||||||| |||||| |||| ||||||    
T  12650887 gttttcaatgaaaagttactatttttagttggcttaacatgtacaatattgcacatgctagataaaccc 12650819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 384444 - 384570
Alignment:
Q  6 tgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttg-tgcatttatattaaatatgtaaatttttagtaattaattgttagt 104  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||| |||||| |   |||||||||||||||| |  ||||| | | ||||||||  |    
T  384444 tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgttttttttatattaaatatgt-agcttttaatcaataattgttgat 384542  T
Q  105 tttcaatgaaaagttactacttttagtt 132  Q
    ||||||||||||||||||||||||||||    
T  384543 tttcaatgaaaagttactacttttagtt 384570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 42750452 - 42750289
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||| |||||||||||| ||| |||||| |||||||||||| |||||||||     || |||| |||||||||||  ||||| |||||| ||| |||||     
T  42750452 tcatatgcaaatttgcatatgttaagaagtttaaagtagtagctttgactt-----ttttgcattttatattaaaattgtaactttttaataaataatta 42750358  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    || ||||||||| |||||||| || |||||||| | ||||||| ||||||||| ||||||||| ||||||    
T  42750357 tt-gttttcaataaaaagttattatttttagttgctttaacatatgcaatattgcacatgttaaacaaac 42750289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 45501628 - 45501456
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||  |||||| |||||| ||| || ||||  ||| ||||||| |||||| ||||||||||  || | || | ||| ||||||    
T  45501628 tcatgtgcaaatttgcacatcttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaactgttgaataaataattg 45501529  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||  |||| ||  ||||||||||||| ||||||   |||||||||||||| || |||||||||||||||||||    
T  45501528 ttgttttttaagaaaaagttactactattagttattttaacatgtgcaatgttgcacatgttagacaaaccca 45501456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 7040261 - 7040431
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||| ||  ||||| ||| |||||||| | ||| |||| ||||| |||||||||| ||| ||||||    
T  7040261 tcatgtgcaaatttgcacatgttaagaagtttaaagtactatgtttgatttggaacttgtgtattttctatt-aatatataaatttttaataaataattg 7040359  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||| |||| || |||| |  ||||||||| | ||||||| |||||| || || |||||||||||||||    
T  7040360 ttgttttccaataaatagttgccgcttttagttactttaacatatgcaattttgcaaatgttagacaaaccc 7040431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 18102239 - 18102364
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg--catttatattaaatatgtaaatttttagtaattaatt 98  Q
    ||||||||||||||||||||| |||||| |||||| || ||||||||||||||||||||||    |||||||||||||||| ||  |||| | | |||||    
T  18102239 tcatgtgcaaatttgcacatgttaagaagtttaaattaataactttgacttgaaacttgtgtttttttatattaaatatgt-aacatttaatcaataatt 18102337  T
Q  99 gttagttttcaatgaaaagttactact 125  Q
    |||  ||||||||||||| ||||||||    
T  18102338 gttgattttcaatgaaaaattactact 18102364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 26300740 - 26300573
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||| |||||||||||||| ||| || |||||| |||||||||||| |||||||||||  | ||| |||||||| | ||| |||||| |||||  ||     
T  26300740 tcatgtacaaatttgcacatgttaaaaagtttaaaatagtaactttgaattgaaacttgtatattttgtattaaatgtataactttttaataatt--ttt 26300643  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    ||  ||||||||  | | ||| |||||||||||   ||||||| ||||||||||||||||||||||||||    
T  26300642 ttttttttcaatacagaattaatacttttagttgttttaacatatgcaatattacacatgttagacaaac 26300573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 4969942 - 4969771
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| ||| || ||||  ||| ||||||| ||||| |||||||||||  || |||| | ||| |||||     
T  4969942 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaataaataatt- 4969844  T
Q  100 ttagtttt-caatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
     ||||||| |||  ||||| ||||||| ||||||   |||||||||||||| || ||||||||||||||||||    
T  4969843 atagttttccaagaaaaagctactactattagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 4969771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 8 - 171
Target Start/End: Complemental strand, 12624798 - 12624636
Alignment:
Q  8 caaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattgttagttt 106  Q
    |||||||||||||| ||||||||||||| | |||| |||| ||| ||||||||| | ||||||||||||||  || |||||| ||| |||||| || |||    
T  12624798 caaatttgcacatgttaagaaatttaaaatggtaagtttgtctt-aaacttgtgtattttatattaaatatacaagtttttaataaataattgatatttt 12624700  T
Q  107 tcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||| |||| | |||| |||||||| |||||| ||||  |||||| ||||| ||| ||||||||    
T  12624699 tcaataaaaaataacta-ttttagttaccttaatatgtataatattgcacatcttaaacaaaccc 12624636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24250667 - 24250595
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttatattaa 73  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||||||||| ||||||||  ||||||||||    
T  24250667 tcatgtggaaatttgaacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttatattaa 24250595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 4161938 - 4161880
Alignment:
Q  113 aaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  4161938 aaaagttactacttttagttcctttaacatgtgcaatattacacatgttagacataccc 4161880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 8091321 - 8091470
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||||| |||||| |||||| |||||||||||  ||| ||||| | || ||| | |||||||| ||| |||||| ||| |||||     
T  8091321 tcatgtgcaaatttacacatgttaagaagtttaaaatagtaactttgcattgtaacttttacattttgtgttaaatatataactttttaataaataatta 8091420  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaat 149  Q
    ||  |||||||| |||| || |||||||||||| | || |||||||||||    
T  8091421 ttgattttcaataaaaatttgctacttttagttgctttgacatgtgcaat 8091470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 24699240 - 24699153
Alignment:
Q  64 tttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt 152  Q
    |||||||||||||||||| ||| || ||| ||||||||  |||||||||||||||||||| |||||||   ||||||||||||||||||    
T  24699240 tttatattaaatatgtaactttataataaataattgttgtttttcaatgaaaagttacta-ttttagtagtcttaacatgtgcaatatt 24699153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22334030 - 22334085
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaac 56  Q
    ||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  22334030 tcatgtgcaaatttgtacatgttaagaagtttaaagtagtaactttgacttgaaac 22334085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5833524 - 5833444
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatt-tatattaaatatgta 80  Q
    ||||||||||||||||||||| ||| || ||||||| |||||||| | |||  |||||||||||| |||||||||||||||    
T  5833524 tcatgtgcaaatttgcacatgttaaaaagtttaaagcagtaacttcgtcttagaacttgtgcattctatattaaatatgta 5833444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 3530123 - 3530276
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||||  |||||  |||| | |||||| |||   |||||| ||||||| ||||||| |||||| ||| |||||| ||| ||||||    
T  3530123 tcatgtgcaaatttacacatattaagacgtttagaatagtaagtttttattgaaatttgtgcattttatatcaaatatataattttttaataaataattg 3530222  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattac 154  Q
    || ||||||||| |||| ||| || | ||| || | ||||||||||| |||||||    
T  3530223 tt-gttttcaataaaaaattattattcttaattgctttaacatgtgcgatattac 3530276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 7899495 - 7899617
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||| ||||||||| | |||| |||| |||  |||||||  | |||||||||||||| |||  ||||| ||| | ||||    
T  7899495 tcatgtgcaaatttgcacatgttaaaaaatttaaaatggtaagtttgtcttataacttgtatattttatattaaatatataacattttaataaattattg 7899594  T
Q  100 ttagttttcaatgaaaagttact 122  Q
     |  ||||||||||||| |||||    
T  7899595 gtgtttttcaatgaaaaattact 7899617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 27300598 - 27300428
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaactt-gtgcattt-atattaaatatgtaaatttttagtaattaatt 98  Q
    |||||| |||||||||||||  |||||| ||||||| | ||| |||| |||||  ||| |||||||| |||||||||||||| ||||||| ||| || ||    
T  27300598 tcatgtacaaatttgcacatattaagaagtttaaagcaataattttgtcttgacgctttgtgcattttatattaaatatgtagatttttaataaatagtt 27300499  T
Q  99 gttagttttcaat-gaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
      |  ||||||||  |||| |||||||||||||     ||||||| ||||||||| ||||| |||||||||    
T  27300498 aatgtttttcaataaaaaaattactacttttagaagatttaacatatgcaatattgcacatattagacaaa 27300428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33072150 - 33072104
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttg 47  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  33072150 tcatgtgcaaatttgtacatgttaagaaatttaaaatagtaactttg 33072104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26050470 - 26050527
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaactt 58  Q
    ||||||||||||||||||||| ||||||||||||| | |||| |||| |||| |||||    
T  26050470 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttgtcttgtaactt 26050527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26059829 - 26059886
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaactt 58  Q
    ||||||||||||||||||||| ||||||||||||| | |||| |||| |||| |||||    
T  26059829 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttgtcttgtaactt 26059886  T

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Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 26951625 - 26951674
Alignment:
Q  122 tacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||||||||| | ||||||||||||||||||||||||| ||| ||||||    
T  26951625 tacttttagttcctttaacatgtgcaatattacacatgtcagaaaaaccc 26951674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 27696740 - 27696704
Alignment:
Q  136 ttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||||||||||||||||| |||||||||||||||||||    
T  27696740 ttaacatgtgcaatattccacatgttagacaaaccca 27696704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 28061435 - 28061495
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  28061435 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 28061495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 38798320 - 38798380
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  38798320 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 38798380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 42593506 - 42593566
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  42593506 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 42593566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 29398227 - 29398294
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||||||||||| ||| || | ||||||   |||||||||||||| || ||||||||||||||||||    
T  29398227 ttttcaatgaaaaattagtattattagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 29398294  T

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Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 38798182 - 38798240
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgtta 162  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||    
T  38798182 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgtta 38798240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8170690 - 8170633
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaactt 58  Q
    |||||| ||||||| |||||| ||| || ||||||||||||||||| |||| ||||||    
T  8170690 tcatgtacaaatttacacatgttaaaaagtttaaagtagtaactttaacttaaaactt 8170633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 29398143 - 29398220
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatat 77  Q
    |||||| |||||||||||||| |||||| |||||| ||| || ||||  ||| ||||||| ||||| |||||||||||    
T  29398143 tcatgttcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatat 29398220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 44807068 - 44807035
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaa 34  Q
    ||||||||||||||||||||||||| ||||||||    
T  44807068 tcatgtgcaaatttgcacatgataataaatttaa 44807035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 2276795 - 2276719
Alignment:
Q  50 ttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactact 125  Q
    |||||||||||| |||| ||||||||||  ||| |||||| ||| |||||| |  ||||||||||| ||||||||||    
T  2276795 ttgaaacttgtgtattttatattaaatagataactttttaataaataattggtgtttttcaatgaagagttactact 2276719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8595066 - 8595007
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg 61  Q
    |||||||||||||| |||||| |||||| |||||| |||| ||||| ||||| ||||||||    
T  8595066 tcatgtgcaaatttacacatgttaagaagtttaaa-tagtgactttaacttggaacttgtg 8595007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 24639644 - 24639541
Alignment:
Q  67 atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagaca 166  Q
    |||||||||||||| ||||||| | | ||||||||  || ||||| ||||  | | | ||||| || | |||||||||||| |||| |||||||||||||    
T  24639644 atattaaatatgtatatttttaatgaataattgttgtttgtcaataaaaaaattccatttttaattactttaacatgtgca-tattgcacatgttagaca 24639546  T
Q  167 aaccc 171  Q
    |||||    
T  24639545 aaccc 24639541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 161
Target Start/End: Complemental strand, 38554342 - 38554246
Alignment:
Q  65 ttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgtt 161  Q
    ||||||||||||| |||||||||| ||  ||||||||  |||||||| |||| |||| | ||||||||   |||||||||  ||||||  |||||||    
T  38554342 ttatattaaatatataaatttttaatatataattgttgtttttcaataaaaatttacgatttttagttagtttaacatgtataatattgtacatgtt 38554246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 44807020 - 44806932
Alignment:
Q  83 tttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||||| ||| ||||| ||  |||||| ||||||  |||||||||||  |  ||||||||||| |||||| ||||| ||||||||||||    
T  44807020 tttttaataaataattattgtttttcagtgaaaaaatactacttttaaatgtcttaacatgtgtaatattgcacatattagacaaaccc 44806932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 45645433 - 45645389
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaa 148  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||    
T  45645433 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaa 45645389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 2e-59; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 27665053 - 27665224
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  ||| ||||||||||||||| |||| | ||| ||||||    
T  27665053 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaa-taaataattg 27665151  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  27665152 ttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaaccca 27665224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 14377593 - 14377422
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||| |  ||| |||||    
T  14377593 tcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaacttttaacaaat-aattg 14377495  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    || ||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  14377494 ttggttttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcacgtgttagacaaaccca 14377422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 19228594 - 19228424
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||  |||  |||||||||||||| |||| |  ||| |||||    
T  19228594 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaat-aattg 19228496  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  19228495 ttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 19228424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 16126568 - 16126738
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||  ||| ||||||||||||||  |||| |  ||| |||||    
T  16126568 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgtagcttttaatcaat-aattg 16126666  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  16126667 ttggttttcaatgaaaaattactacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 16126738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 22705621 - 22705452
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgtt 101  Q
    ||||||||||||||||||  |||||| ||||||||||||| ||| ||||||||||||||  ||| ||||||||||||||| |||  | |||| |||||||    
T  22705621 atgtgcaaatttgcacattttaagaagtttaaagtagtaattttaacttgaaacttgtgttttttatattaaatatgtaactttaaattaat-aattgtt 22705523  T
Q  102 agttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
     |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  22705522 ggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccca 22705452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 16919163 - 16919335
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||  ||| || ||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||| |  ||| |||||    
T  16919163 tcatgtgcaaatttgcacatattaacaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaacttttaatcaat-aattg 16919261  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    || ||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  16919262 ttggttttcaacaaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaacccaa 16919335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 15411632 - 15411802
Alignment:
Q  2 catgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgt 100  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||| |||||||||||| ||||| ||||||||||||||  |||||| ||| | |||||    
T  15411632 catgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagctttttaataaattattgt 15411731  T
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |  |||||||| |||| ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  15411732 tgtttttcaataaaaaattactacttttagttactttaacatgtgcaatattgcacatgttagacaaaccc 15411802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 12016835 - 12016665
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||  |||||| ||||||||||||| ||| ||||| ||||||||  ||| ||||||||||||||  |||| |  ||| |||||    
T  12016835 tcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaat-aattg 12016737  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || ||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  12016736 ttggttttcaataaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 12016665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 3 - 174
Target Start/End: Complemental strand, 4821443 - 4821278
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattgtt 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||   |||||||||||||||| |  ||||| ||| ||||||||    
T  4821443 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgatttgaaacttgtgttttttatattaaatatgt-agcttttaataaataattgtt 4821345  T
Q  102 agttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaa 174  Q
     |||||||||||||||||||      ||||| || |||||| ||||||||| |||||||||||||||||||||    
T  4821344 ggttttcaatgaaaagttac------tagttgccataacatatgcaatattgcacatgttagacaaacccaaa 4821278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 5583567 - 5583738
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||  ||| ||||||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  5583567 tcatgcgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 5583666  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    || |||| |||| |||| || |||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  5583667 ttggttt-caataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccca 5583738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 12919359 - 12919528
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||||| ||| ||||||||| ||||||||||  |||||||||||| || |||||||||||||||||  |||||| ||| | ||||    
T  12919359 tcatgtgcaaatttacacatgttaaaaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaatatgtagttttttaataaattattg 12919458  T
Q  100 ttagttttcaat-gaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
     || ||||||||  |||| ||| |||||||| || | ||||||||||||||||| |||||||||||||||    
T  12919459 ctacttttcaataaaaaaattaatacttttaattgctttaacatgtgcaatattgcacatgttagacaaa 12919528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16123447 - 16123291
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||| | | ||||||||  ||| |||||||||||||||  ||| |  ||  |||||    
T  16123447 tcatgtgcaaatttgcacatgataagaagtttaaattagtaattttgattaggaacttgtgttttttatattaaatatgtaacatttaatcaac-aattg 16123349  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacaca 157  Q
    || |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  16123348 tttgttttcaatgaaaagttacttcttttagttaccttaacatgtgcaatattgcaca 16123291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 23932734 - 23932562
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||| ||  |||||| |||||| ||||||  |||  | | ||||||||||||| ||||||| |||  || |||||| ||| ||||||    
T  23932734 tcatgtgcaaatttgcatatattaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaactttttaataaataattg 23932635  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||  ||||||||| |||||||||| |||||||| | ||||||||||||||||| |||||||||||||||||||    
T  23932634 ttctttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcacatgttagacaaaccca 23932562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 39904074 - 39904228
Alignment:
Q  18 catgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaa 116  Q
    |||| |||||| ||||||||||||| ||| ||||| ||||| ||   ||||||||||| |||| |  ||||| | | ||||||||  |||||||||||||    
T  39904074 catgttaagaagtttaaagtagtaaatttaacttggaacttatgttttttatattaaacatgt-agcttttaatcaataattgttgattttcaatgaaaa 39904172  T
Q  117 gttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  39904173 gttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccca 39904228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 9747486 - 9747314
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||||| |||||| |||||| |||||| |||| |||| ||||||| ||||| ||||||||||||||  |||||   || || |||    
T  9747486 tcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgttcattttatattaaatatgtagcttttttacaaatagttg 9747387  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||  |||||||| || |||||||||||||||||   |||||||||| | |||| |||||||||||||||||||    
T  9747386 ttgtttttcaataaatagttactacttttagttaatttaacatgtgtactattgcacatgttagacaaaccca 9747314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 7 - 172
Target Start/End: Original strand, 13351226 - 13351392
Alignment:
Q  7 gcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattgttagtt 105  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||  ||||||||   |||||||| ||||||||| |||| | ||| ||||||||  ||    
T  13351226 gcaaatttgcacatgttaagaagtttaaagtagtaactttgacttagaacttgtgttttttatatttaatatgtaacttttaattaa-taattgttgatt 13351324  T
Q  106 ttcaat-gaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||||||  |||| | ||||||||||||| ||||||||||||||||||| ||||| |||| || |||||    
T  13351325 ttcaataaaaaaataactacttttagttaccttaacatgtgcaatattgcacatattagtcagaccca 13351392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 2060053 - 2060183
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattgtt 101  Q
    |||||||||||| |||||| |||||||||||||||||||||||| ||||| || ||||| | |||||||||||||||||  | |||| ||| ||||||||    
T  2060053 atgtgcaaatttacacatgttaagaaatttaaagtagtaactttaacttggaatttgtgtcttttatattaaatatgtagctctttaataaataattgtt 2060152  T
Q  102 agttttcaatgaaaagttactacttttagtt 132  Q
      |||| |||||||||||| |||||||||||    
T  2060153 gatttttaatgaaaagttattacttttagtt 2060183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 26229864 - 26230032
Alignment:
Q  2 catgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgt 100  Q
    ||||||||||||||  || | |||||| |||||| ||||||||||||||| ||| || |   ||| ||||||||||||||| |||| |  ||| ||||||    
T  26229864 catgtgcaaatttgtccaggttaagaagtttaaaatagtaactttgacttaaaatttatattttttatattaaatatgtaacttttaatcaat-aattgt 26229962  T
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    | ||||| ||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  26229963 tggtttt-aataaaaaattactacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 26230032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 37471757 - 37471927
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattgttagtttt 107  Q
    ||||||||||||| |||||| |||||| ||||||||||| |||||||||||| || |||||||||||||||||  |||||| ||| | ||||||   |||    
T  37471757 aaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagttttttaataaattattgttgtcttt 37471856  T
Q  108 caat-gaaaagttactacttttagtttcctt-aacatgtgcaatattacacatgttagacaaacccaaaaa 176  Q
    ||||  ||||  ||||| |||||||| | || |||||||||||||||||| ||||||||||||| ||||||    
T  37471857 caataaaaaaaatactatttttagttgctttaaacatgtgcaatattacaaatgttagacaaactcaaaaa 37471927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 7757795 - 7757963
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||||| ||||||||||||| |||||||||||  ||| ||||||  || ||| |||||||||| ||| |||||  ||| ||||||    
T  7757795 tcatgtgcaaatttacacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 7757894  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    || ||||| ||| |||| ||  ||||||||||| ||||||||||| |||| || ||||||||||||||||    
T  7757895 ttggtttt-aataaaaacttgttacttttagttaccttaacatgtacaattttgcacatgttagacaaac 7757963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 52 - 152
Target Start/End: Original strand, 22162137 - 22162237
Alignment:
Q  52 gaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaata 150  Q
    ||||||||||||||| ||||||| |||||| ||||||| |||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||    
T  22162137 gaaacttgtgcattttatattaactatgtagatttttaataattaattgttggttt-caataaaaagttactacttttagttgccttaacatgtgcaata 22162235  T
Q  151 tt 152  Q
    ||    
T  22162236 tt 22162237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 34213961 - 34214136
Alignment:
Q  4 tgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttat-attaaa--tatgtaaatttttagtaattaattgt 100  Q
    |||||||||||||||||| ||||||||||||| |||||| |||   ||| ||||||  ||||| | ||||||  ||| ||| ||||||  || |||||||    
T  34213961 tgtgcaaatttgcacatgttaagaaatttaaaatagtaatttttcattggaacttgaacattttttattaaaaatatataactttttataaaataattgt 34214060  T
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaaaa 176  Q
    | ||||||||| |||| |||||| |||||||| | |||||||||||| ||||| ||||||||||||||||| ||||    
T  34214061 tggttttcaataaaaacttactatttttagttgctttaacatgtgcagtattatacatgttagacaaaccctaaaa 34214136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 8770895 - 8771021
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||| || ||   |||||||||||||||| || ||||| ||| ||||||    
T  8770895 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttgaaatttttgttttttatattaaatatgt-aacttttaataaataattg 8770993  T
Q  100 ttagttttcaatgaaaagttactacttt 127  Q
    || ||||| | |||||||||||||||||    
T  8770994 ttggtttttattgaaaagttactacttt 8771021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 15231998 - 15231912
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaattttta 88  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||||| |||||||||||||| ||||||||||||||| ||||||    
T  15231998 atgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttaaaacttgtgcatttcatattaaatatgtaacttttta 15231912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20566026 - 20566199
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttat-attaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||||| |||||| ||||||||| ||  ||||  ||| |||||||| |||| | ||||||||  |||  ||||| ||| ||||||    
T  20566026 tcatgtgcaaatttacacatgttaagaagtttaaagtattatgtttgtattggaacttgtgtattttttattaaatagataatattttaataaataattg 20566125  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    ||  |||||||| || |||| ||| |||||||| | ||||||||||||||||| ||||||||||||| ||||||    
T  20566126 ttgtttttcaataaatagttgctatttttagttactttaacatgtgcaatattgcacatgttagacagacccaa 20566199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 153
Target Start/End: Original strand, 41492150 - 41492293
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattgttagtttt 107  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||||||||||||| ||| ||||||||||| |  ||||||  || ||||||||  ||||    
T  41492150 aaatttgcacatgataagaagtttaaagtaataactttaacttgaaacttgtgcattttttattaaatatgaagtttttta--aaataattgttcttttt 41492247  T
Q  108 caatgaaaagttactacttttagtttccttaacatgtgcaatatta 153  Q
    |||| | ||  || |||||||| ||||||||| |||| ||||||||    
T  41492248 caataataaaatattacttttaatttccttaatatgtacaatatta 41492293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 64 - 173
Target Start/End: Complemental strand, 10690887 - 10690779
Alignment:
Q  64 tttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttag 163  Q
    |||||||||||||||||  |||| |  ||| ||||||| ||||| |||||||| |||||| ||||||||  |||||||||||||||||| ||||||||||    
T  10690887 tttatattaaatatgtagcttttaatcaat-aattgttggtttttaatgaaaaattactaattttagttaacttaacatgtgcaatattgcacatgttag 10690789  T
Q  164 acaaacccaa 173  Q
    ||||||||||    
T  10690788 acaaacccaa 10690779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 36731349 - 36731181
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatt-tatattaaatatgtaaattttt-agtaattaatt 98  Q
    ||||||| |||||| |||||| ||||||||||||| | |||| |||| |||  |||||||| ||| |||||||||||  ||| ||||| | |||| ||||    
T  36731349 tcatgtgtaaatttacacatgttaagaaatttaaaatggtaaatttgtcttagaacttgtgtattctatattaaatagataatttttttaataat-aatt 36731251  T
Q  99 gttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
      |  ||||||||||||||||||||| |||||||| ||||||| ||||||| || ||||||||||||||||    
T  36731250 agtgtttttcaatgaaaagttactacatttagttttcttaacaagtgcaat-ttgcacatgttagacaaac 36731181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 4579901 - 4579966
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||||| ||||||||||||||||    
T  4579901 ttttcaatgaaaagttactatatttagtttccttaacatgtgtaatattgcacatgttagacaaac 4579966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 38248429 - 38248580
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||   ||| ||||||  || ||| |||||||||| ||| |||||  ||| ||||||    
T  38248429 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattttacattggaacttgaacattttgtattaaatatataattttttgttaaataattg 38248528  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatta 153  Q
    || ||||| ||| |||| || ||| |||||||| ||||||||||||||||||||    
T  38248529 ttggtttt-aataaaaacttgcta-ttttagttaccttaacatgtgcaatatta 38248580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 43806526 - 43806358
Alignment:
Q  4 tgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgtta 102  Q
    |||| ||||||||||||| ||| || |||||| ||| || ||||  ||||||||||| |||||| ||||||||||  || |||| | ||| ||||||||     
T  43806526 tgtgtaaatttgcacatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttgaataaataattgttg 43806427  T
Q  103 gttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
     ||| |||  ||||||||||||| ||| ||   |||||||||||||| || ||||||||||||||||||    
T  43806426 ttttccaagaaaaagttactactattaattgttttaacatgtgcaatgttgcacatgttagacaaaccc 43806358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 9450426 - 9450264
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||| |||||||| |||||||||||||||||||  ||||  ||| || ||||| | ||| |||||||||| ||| |||||| ||| ||||||    
T  9450426 tcatgtgcaaatctgcacatgttaagaaatttaaagtagtatgtttgtattggaatttgtgtattttctattaaatatataattttttaataaataattg 9450327  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgtta 162  Q
    ||  |||||||| || ||||  || |||||  | | |||| |||||||||||| |||||||||    
T  9450326 ttgtttttcaataaatagtttttatttttaactactttaagatgtgcaatattgcacatgtta 9450264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 45062367 - 45062238
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||  |||||| || ||| ||||||||||   ||| |||||||||| ||||||||||| |||||| |||||| ||| |||||     
T  45062367 tcatgtgcaaatttgcacatattaagaagttcaaaatagtaactttattttggaacttgtgcattttatattaaacatgtaactttttaataaataattt 45062268  T
Q  100 ttagttttcaatgaaaagttactactttta 129  Q
    ||  |||| ||| ||||||||| |||||||    
T  45062267 ttgttttttaataaaaagttaccactttta 45062238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 7720284 - 7720111
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||| || ||| || |||||  ||| || ||||  ||| ||| ||| || ||| ||||||||||  || |||| | ||| ||||||    
T  7720284 tcatgtgcaaatttgcacgtgttaaaaagtttaagatagaaattttgtattggaacgtgtacacttagtattaaatattaaacttttgaataaataattg 7720185  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    ||  |||||||  ||||||||||||| ||||||   |||||||||||||| || ||||||||||||||| ||||    
T  7720184 ttgtttttcaaaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaatccaa 7720111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 174
Target Start/End: Original strand, 12438723 - 12438830
Alignment:
Q  65 ttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    ||||||||||||| ||  |||||| ||| |||||||| ||||| |||||||||||| || ||||||||  || ||||| ||||||||| ||||||||| |    
T  12438723 ttatattaaatatatag-tttttaataaataattgttggtttt-aatgaaaagttattatttttagttgtctgaacatatgcaatattgcacatgttata 12438820  T
Q  165 caaacccaaa 174  Q
    ||||||||||    
T  12438821 caaacccaaa 12438830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 24729586 - 24729718
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||  ||| || ||||  | ||| |||||| ||  ||| |||||| ||| |||||     
T  24729586 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgtatattttgtattaattacataactttttaataaataatta 24729685  T
Q  100 ttagttttcaatgaaaagttactacttttagtt 132  Q
    ||  |||||||| |||| |||||| ||||||||    
T  24729686 tttattttcaataaaaatttactatttttagtt 24729718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 25998015 - 25998179
Alignment:
Q  5 gtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgttag 103  Q
    |||||||||||||  || ||| ||| |||||  | ||| ||||  ||| ||||||| |||||| || ||||||||||  |||||| ||| ||||||||      
T  25998015 gtgcaaatttgcatgtgttaaaaaaattaaaaaattaattttgcattggaacttgttcatttaataataaatatgtatctttttaataaataattgttgt 25998114  T
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    |||||||| |||||||   |||||||||| | ||||||||||||||| | |||||||| ||||||    
T  25998115 ttttcaataaaaagttttcacttttagttactttaacatgtgcaataatgcacatgttcgacaaa 25998179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 43388858 - 43388946
Alignment:
Q  83 tttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||||| ||| ||||||||  |||||||| |||| || |||||||||||| | |||| |||||||||||| ||||| ||||||||||||    
T  43388858 tttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcacatattagacaaaccc 43388946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 26003613 - 26003672
Alignment:
Q  113 aaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||||||||||||| ||||||   |||||||||||||| || |||||||||||||||||||    
T  26003613 aaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaaccca 26003672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 29157838 - 29157897
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgt 60  Q
    ||||||||||||||||||||| |||||||||| || |||||||||||  ||| |||||||    
T  29157838 tcatgtgcaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgt 29157897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 3504548 - 3504467
Alignment:
Q  91 aattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    |||| ||||||| |||||||| ||||||||||||||| |||| | ||||||||||||  | | |||||||||| |||||||||    
T  3504548 aatttattgttatttttcaataaaaagttactactttcagttgctttaacatgtgcagaaatgcacatgttag-caaacccaa 3504467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 172
Target Start/End: Complemental strand, 35729285 - 35729113
Alignment:
Q  2 catgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgt 100  Q
    ||||| |||||||||||||| | |||| |||||||||| || |||   ||| |||||||| |||| ||| ||||||| |||||||||| ||| ||||| |    
T  35729285 catgtacaaatttgcacatgttgagaagtttaaagtagcaaatttatattggaacttgtgtattttatagtaaatatataaatttttaataaataatt-t 35729187  T
Q  101 tagttttcaatgaaaa--gttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    | ||||  ||  ||||  |||  | |||||  | || ||||||||||||||||| |||||||||||||||||||    
T  35729186 tggtttaaaaaaaaaaaagttgattcttttgatatctttaacatgtgcaatattgcacatgttagacaaaccca 35729113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 2051719 - 2051630
Alignment:
Q  64 tttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatta 153  Q
    |||||||||||||| |||||||||| ||| ||||||||  |||||||| |||| || ||| ||||||||   ||||||| | ||||||||    
T  2051719 tttatattaaatatttaaatttttaataaataattgttgtttttcaataaaaacttgctaattttagttgttttaacatatacaatatta 2051630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4576335 - 4576412
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatat 77  Q
    ||||||||||||| ||| ||| ||||||||||||| ||| || ||||  ||||||||||| ||||| |||||||||||    
T  4576335 tcatgtgcaaattcgcatatgttaagaaatttaaaatagaaattttgtattgaaacttgtacatttaatattaaatat 4576412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 3286561 - 3286501
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  3286561 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 3286501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 3951316 - 3951256
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  3951316 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 3951256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 8847853 - 8847793
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  8847853 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 8847793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 25970100 - 25970068
Alignment:
Q  136 ttaacatgtgcaatattacacatgttagacaaa 168  Q
    |||||||||||||||||||||||||||||||||    
T  25970100 ttaacatgtgcaatattacacatgttagacaaa 25970068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26003355 - 26003431
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaata 76  Q
    ||||||||||||||||||||| |||||| |||||| ||| || ||||  |||||| |||| ||||| ||||||||||    
T  26003355 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaatttgtacatttgatattaaata 26003431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 34817644 - 34817541
Alignment:
Q  68 tattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaa 167  Q
    |||||||||| ||| |||||| ||| |||||||| ||||||||| || ||||  || ||||||||   |||| | |||||||||| || |||||||||||    
T  34817644 tattaaatatataactttttaataaataattgtt-gttttcaataaatagttgatatttttagttattttaatacgtgcaatattgcatatgttagacaa 34817546  T
Q  168 accca 172  Q
    |||||    
T  34817545 accca 34817541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 43941966 - 43942026
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  43941966 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 43942026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 29795111 - 29795056
Alignment:
Q  116 agttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||| ||| |||||||| | |||| |||||||||||| ||||||||||||||||||    
T  29795111 agttgctatttttagttactttaatatgtgcaatattgcacatgttagacaaaccc 29795056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 171
Target Start/End: Original strand, 36612792 - 36612911
Alignment:
Q  53 aaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatat 151  Q
    |||||||| |||||| ||||||||||  || |||| | ||| ||| ||||  ||| |||  ||||||||||||| ||||||   |||||||| ||||| |    
T  36612792 aaacttgtacatttaatattaaatataaaacttttgaataaataaatgttgttttccaaaaaaaagttactactattagttattttaacatgagcaatgt 36612891  T
Q  152 tacacatgttagacaaaccc 171  Q
    | ||||||||||||||||||    
T  36612892 tgcacatgttagacaaaccc 36612911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 171
Target Start/End: Original strand, 36620643 - 36620762
Alignment:
Q  53 aaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatat 151  Q
    |||||||| |||||| ||||||||||  || |||| | ||| ||| ||||  ||| |||  ||||||||||||| ||||||   |||||||| ||||| |    
T  36620643 aaacttgtacatttaatattaaatataaaacttttgaataaataaatgttgttttccaaaaaaaagttactactattagttattttaacatgagcaatgt 36620742  T
Q  152 tacacatgttagacaaaccc 171  Q
    | ||||||||||||||||||    
T  36620743 tgcacatgttagacaaaccc 36620762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 16755027 - 16754969
Alignment:
Q  113 aaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||||||||||| ||||||   ||||||| |||||| || ||||||||||||||||||    
T  16755027 aaaagttactactattagttgttttaacatttgcaatgttgcacatgttagacaaaccc 16754969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17265573 - 17265527
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttg 47  Q
    |||||| ||||||||||| || ||||||||||||| |||||||||||    
T  17265573 tcatgtccaaatttgcacttgttaagaaatttaaaatagtaactttg 17265527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 27865907 - 27865992
Alignment:
Q  83 tttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    |||||| ||||| ||||||  |||||||| |||| ||| ||||||||||||| ||||||| |||||  || | ||||||||||||||    
T  27865907 tttttaataattgattgttgtttttcaataaaaa-ttattacttttagtttctttaacatatgcaacgttgctcatgttagacaaac 27865992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 29142243 - 29142110
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||||| | |||| |||||  ||| || ||||  ||  ||||||| |||||| ||||||||||  || |||| | ||| ||||||    
T  29142243 tcatgtgcaaatttacacatgtttagaagtttaatatagaaattttgtattttaacttgtacatttaatattaaatataaaatttttgaataagtaattg 29142144  T
Q  100 ttagttttcaatgaaaagttactacttttagttt 133  Q
    ||  |||||||  ||||||||||||| |||||||    
T  29142143 ttgtttttcaagaaaaagttactactattagttt 29142110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 40562094 - 40562255
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattgttagtttt 107  Q
    ||||||||||||| ||| || |||||| || ||||||||  ||||||||| |  | ||| |||| ||||| ||| | |||| ||| ||||||||  ||||    
T  40562094 aaatttgcacatgttaaaaagtttaaaatattaactttgcattgaaacttttatattttgtatttaatatataactctttaataaataattgttgatttt 40562193  T
Q  108 caatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    |||| |||| ||||| ||||||  | | ||||||||| ||||||| || ||| |||| ||||    
T  40562194 caataaaaacttactgcttttaactactttaacatgtacaatattgcaaatggtagataaac 40562255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 44195993 - 44195940
Alignment:
Q  125 ttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaaaatt 178  Q
    |||||||||| ||||||||||||||| | ||||| ||| |||||||| ||||||    
T  44195993 ttttagtttctttaacatgtgcaatactgcacatattaaacaaaccctaaaatt 44195940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 45302445 - 45302340
Alignment:
Q  64 tttatattaaatatgtaaatttttagtaattaattgttagttttc-aatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgtta 162  Q
    |||||||||||||| ||| |||||| ||| ||||| ||  ||||  ||| |||| ||| ||||||| ||||| |||||||||| | ||||  ||||||||    
T  45302445 tttatattaaatatataattttttaataaataattattgtttttttaataaaaacttattactttttgtttctttaacatgtgtattattgtacatgtta 45302346  T
Q  163 gacaaa 168  Q
    ||||||    
T  45302345 gacaaa 45302340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 9e-59; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 11611083 - 11610913
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  ||| ||||||||||||||| |||| | ||| ||||||    
T  11611083 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaa-taaataattg 11610985  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  11610984 ttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaaccc 11610913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 20938226 - 20938057
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt--atattaaatatgtaaatttttagtaattaatt 98  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  |||  ||||||||||||||| |||||| | | |||||    
T  20938226 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttttatattaaatatgtaa-tttttaatcaataatt 20938128  T
Q  99 gttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  20938127 gttagttttcaataaaaagttattacttttagttaccttaacatgtgcaatattgcacatgttagacaaac 20938057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 13495463 - 13495292
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||  |||||| ||| ||||||    
T  13495463 tcatgtgaaaatttgcacatgataagaagtttaaagtagtaattttgacttggaacttgtgcattttatattaaatatgtaggtttttaataaataattg 13495364  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  |||||||| |||| ||||||||||||||| |||||||||||||||  || ||||||||||||||||||    
T  13495363 ttgattttcaataaaaaattactacttttagttaccttaacatgtgcaaatttgcacatgttagacaaaccc 13495292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 40497216 - 40497073
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||  |||||||||| |||||||||| |||||| ||||||| ||||||||||    
T  40497216 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgcattttatattaactatgtagatttttaataattaattg 40497117  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgt 144  Q
    || | ||||||| |||||||||||||||||||| |||||||||||    
T  40497116 tt-gatttcaataaaaagttactacttttagttgccttaacatgt 40497073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 38389616 - 38389442
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||||| |||| ||||||||| ||||||||||||| ||||||||||||||  |||||| ||| ||| |     
T  38389616 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 38389517  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaa 174  Q
    ||  |||||||| |||| ||||||||||||| |  ||||||||||||||| || |||||||||||||||||||||    
T  38389516 ttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaacccaaa 38389442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 3863498 - 3863328
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||  |||| ||||||||  ||| ||||||||||||||  |||| |  ||| |||||    
T  3863498 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttagcttggaacttgtgttttttatattaaatatgtagcttttaatcaat-aattg 3863400  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
     |  ||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  3863399 ctgattttcaatgaaaagttactacctttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 3863328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 2571437 - 2571265
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||  ||| ||||||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  2571437 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 2571338  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    || |||| |||| |||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  2571337 ttggttt-caataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaacccaa 2571265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 12 - 170
Target Start/End: Complemental strand, 50364348 - 50364190
Alignment:
Q  12 tttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaa 110  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||||  ||| ||||||||||||||| |||| |  ||| ||||||| ||||||||    
T  50364348 tttgcacatgctaagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaatcaat-aattgttggttttcaa 50364250  T
Q  111 tgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    | | |||||||||||||||||| |||| |||||||||||| | |||||||||||||||||    
T  50364249 ttataagttactacttttagttacctttacatgtgcaatactgcacatgttagacaaacc 50364190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 10307935 - 10307764
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||| ||||  ||| ||||||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  10307935 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaaatttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 10307836  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    || |||| |||| |||| || |||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  10307835 ttggttt-caataaaaatttgctacttttagttaccttatcatgtgcaatattgcacatgttagacaaaccca 10307764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 46492352 - 46492525
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||| | |||||||||||||||||||||||||  ||||||||||| || ||| |||||||||| ||| |  ||| ||| ||||||    
T  46492352 tcatgtgcaaattttcacacgttaagaaatttaaagtagtaactttgcattgaaacttgtacattttgtattaaatatataactcgttaataaataattg 46492451  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    ||  |||||||| |||| |||| |||||||||| | ||||||||||||||||| ||||| ||| |||| |||||    
T  46492452 ttgtttttcaataaaaacttaccacttttagttgctttaacatgtgcaatattgcacattttaaacaaccccaa 46492525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12515483 - 12515654
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||||||||| ||| ||||||||| |||||||||||  | | ||||||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  12515483 tcatgtgtaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatatataactttttgttaaataattg 12515582  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    || ||||| ||| |||| || |||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  12515583 ttggtttt-aataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccca 12515654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 23638058 - 23638230
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||| ||||||||||||||| ||||||||||||| | |||| || | ||||||||||||| |||| |||||||||||  || |||||| ||| ||||||    
T  23638058 tcatgagcaaatttgcacatgttaagaaatttaaaatggtaagttagtcttgaaacttgtgtattttatattaaatatacaactttttattaaataattg 23638157  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
     |  ||||||||  |||||||||||||| ||||  |||||||||  ||||||| |||||||||||||||||||    
T  23638158 atgtttttcaatagaaagttactactttaagttaacttaacatgcacaatattgcacatgttagacaaaccca 23638230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 32553535 - 32553366
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| |||||| |||||| |||||| |||||| || ||||||| | ||||||||||||  ||| |||||||||||||||  ||| | |||| ||||     
T  32553535 tcatgtgtaaatttacacatgttaagaagtttaaattaataactttaatttgaaacttgtgttttttatattaaatatgtaatatttaactaat-aatta 32553437  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    ||  |||||||||||||||||||||||||| || |||||||||||| |||||| ||||||||||| |||||    
T  32553436 ttgattttcaatgaaaagttactacttttaattaccttaacatgtgtaatattgcacatgttagataaacc 32553366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 16875037 - 16875175
Alignment:
Q  4 tgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattgtta 102  Q
    |||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||   |||||||||||||||| |  ||||| | |  |||||||     
T  16875037 tgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgt-agcttttaatcaacaattgttg 16875135  T
Q  103 gttttcaatgaaaagttactacttttagtttccttaacat 142  Q
    ||||||||| |||| ||||||||||||||| |||||||||    
T  16875136 gttttcaataaaaaattactacttttagttaccttaacat 16875175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 65 - 167
Target Start/End: Complemental strand, 37444250 - 37444149
Alignment:
Q  65 ttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||||  ||||| ||||||| |||||||||||| | ||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  37444250 ttatattaaccatgtagatttttaataattaattgtt-gatttcaataaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttaga 37444152  T
Q  165 caa 167  Q
    |||    
T  37444151 caa 37444149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 27 - 168
Target Start/End: Original strand, 54621253 - 54621394
Alignment:
Q  27 aaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactact 125  Q
    ||||||||| |||||||||||||||| || |||||  ||| |||||||||||||||  ||| |  ||| ||||||| ||||| |||||||| ||||||||    
T  54621253 aaatttaaattagtaactttgacttggaagttgtgttttttatattaaatatgtaacatttaatcaat-aattgttggtttttaatgaaaaattactact 54621351  T
Q  126 tttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    |||| || ||||||||| ||||||||| |||||||||||||||    
T  54621352 tttaattaccttaacatatgcaatattgcacatgttagacaaa 54621394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 54527717 - 54527884
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgtt 101  Q
    ||||||||||||||||||| ||||||||||||| ||  || ||||  ||| ||||||| |||||| ||||||||||  || |||| | ||| ||||||||    
T  54527717 atgtgcaaatttgcacatgttaagaaatttaaaatataaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaataattgtt 54527816  T
Q  102 agttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
      ||| |||  ||||||||||||| ||||||   |||||||||||||| || ||||||||||||||||    
T  54527817 gttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaac 54527884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 51339286 - 51339360
Alignment:
Q  94 taattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    |||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  51339286 taattgttggttttcaatgaaaaattactatttttagttaccttaacatgtgcaatattgcacatgttagacaaa 51339360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 51618216 - 51618048
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||| || | |||||||||  ||| ||||||| |||||  |||||||||| ||   ||||| ||| ||||||    
T  51618216 tcatgtgcaaatttgcacatgttaagaagtttcaaattgtaactttgcattggaacttgtacattttgtattaaatatata---ttttaataaataattg 51618120  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  |||||| | |||| || || |||||||||   ||||||||||||||||| ||||||||||||||||||    
T  51618119 ttgtttttcagtaaaaacttgctgcttttagttgttttaacatgtgcaatattgcacatgttagacaaaccc 51618048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23523115 - 23523035
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgta 80  Q
    ||||||||||||||||||||| |||||| |||||||| |||| ||||||||| ||||||||||||| ||||||||||||||    
T  23523115 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgta 23523035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 37055375 - 37055546
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||||||||  |||||| |||||| ||||||  |||  | | ||||||||   |||||||||| |||  || |||||| ||| ||||||    
T  37055375 tcatgtgaaaatttgcacatattaagaagtttaaaatagtaaagttgtatcggaacttgtgttttttatattaactataaaactttttaataaataattg 37055474  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||||||||| |||||||||| |||||||| | ||||||| |||||||||  |||||||||||||||||    
T  37055475 ttctttttcaatgtaaagttactatttttagttcctttaacatatgcaatattgtacatgttagacaaaccc 37055546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 50204572 - 50204401
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| ||| || ||||  ||| ||| ||| |||||| ||||||||||  || |||| | ||  ||||||    
T  50204572 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacctgtacatttaatattaaatataaaacttttgaatatataattg 50204473  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||| ||| |||  |||| |||||||| ||||||   |||||||||||||| || ||||||||||||||||||    
T  50204472 ttattttccaagaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 50204401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 36426418 - 36426591
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| |||||| |||||| |||||| |||||||| |||| ||||||||| ||||||||||||| ||||||||||||||  |||||| ||| ||| |     
T  36426418 tcatgtgtaaatttacacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 36426517  T
Q  100 ttagttttcaat--gaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||||| ||   |||| ||||||||||||| |   |||||||||||||| || |||||| |||| ||||||    
T  36426518 ttgtttttcgataaaaaaaattactacttttagatattttaacatgtgcaatgttgcacatgatagaaaaaccc 36426591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11611145 - 11611094
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttg 52  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11611145 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttg 11611094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 42180221 - 42180049
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||||||||| |||||| |||||| ||  || ||||  ||| ||||||| ||||| |||||||||||  || |||| | ||| |||||     
T  42180221 tcatgtgtaaatttgcacatgttaagaagtttaaaataaaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaataaataatt- 42180123  T
Q  100 ttagtttt-caatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
     ||||||| |||  ||||||||||||| ||||||   |||||||||||||| || |||||||||||||||||||    
T  42180122 atagttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaaccca 42180049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29686489 - 29686429
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg 61  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||  ||||||||    
T  29686489 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtg 29686429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 51567829 - 51567998
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||   |||||| ||| || ||||  ||||||||||| |||||| ||||||||||  || |||| | ||| ||||||    
T  51567829 tcatgtgcaaatttgcacatgttaag---tttaaaatagaaattttgtattgaaacttgtacatttactattaaatataaaacttttgaataaataattg 51567925  T
Q  100 ttagttttcaatgaaaa--gttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||| | |||||  ||||||||| ||||||   |||||||||||||| || | ||||||||||||||||    
T  51567926 tt-gttttccaagaaaaaagttactactattagttgttttaacatgtgcaatgttgcgcatgttagacaaaccc 51567998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 30214103 - 30214189
Alignment:
Q  84 ttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||| ||| ||||||||  |||||||||||||||||||| |||||||| |||||  ||||| |||||| ||||||||||||||||||    
T  30214103 ttttaataaataattgttgattttcaatgaaaagttacta-ttttagttgccttagaatgtgtaatattgcacatgttagacaaaccc 30214189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 173
Target Start/End: Original strand, 46845532 - 46845622
Alignment:
Q  83 tttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    |||||| ||| ||||||||  |||||||| |||| || |||||||||||| | |||| |||||||||||| ||||| ||||||||||||||    
T  46845532 tttttaataaataattgttgattttcaataaaaaatttctacttttagttgctttaagatgtgcaatattgcacatattagacaaacccaa 46845622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 53794894 - 53794780
Alignment:
Q  40 taactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttcctta 138  Q
    |||||||  |||||||||| | ||||| ||||||||||||||| |||||| ||| | ||||||| |||||||| || ||||| || ||||||||   |||    
T  53794894 taactttatcttgaaacttattcattttatattaaatatgtaactttttaataaattattgttacttttcaataaatagttattatttttagttggttta 53794795  T
Q  139 acatgtgcaatatta 153  Q
    |||||||||||||||    
T  53794794 acatgtgcaatatta 53794780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 35095021 - 35094973
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt 152  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  35095021 ttttcaatgaaaagttactgcttttagttaccttaacatgtgcaatatt 35094973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 48240218 - 48240266
Alignment:
Q  121 ctacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  48240218 ctacttttagtttctttaacatgtgtaatattacacatgttagacaaac 48240266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 160
Target Start/End: Original strand, 2379088 - 2379238
Alignment:
Q  8 caaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgttagttt 106  Q
    ||||||| |||||| || |||||||||| || ||||||||  || ||||||||  ||||  |||| ||||| | | |||||| ||| |||||||||   |    
T  2379088 caaatttacacatgttaggaaatttaaactaataactttgcattaaaacttgtatattttgtatttaatatatgactttttaataaataattgtta---t 2379184  T
Q  107 tcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgt 160  Q
    ||||| |||| |||||||||||||||   ||||||||||||||||| |||||||    
T  2379185 tcaataaaaacttactacttttagttgttttaacatgtgcaatattgcacatgt 2379238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 170
Target Start/End: Original strand, 39365255 - 39365310
Alignment:
Q  115 aagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    |||||||||||||||||  | ||||||||||||||||| |||||||||||||||||    
T  39365255 aagttactacttttagtagctttaacatgtgcaatattgcacatgttagacaaacc 39365310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 47386987 - 47386920
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||||||| |||| ||||||||||||||| | |||| ||| |||||||| ||||||||||||||||||    
T  47386987 ttttcaataaaaacttactacttttagttgctttaatatgcgcaatattgcacatgttagacaaaccc 47386920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 38786343 - 38786463
Alignment:
Q  11 atttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattgttagttttca 109  Q
    ||||||||||| |||||| |||||| |||||| ||||| |||||| ||||| | |||||| ||||| ||| | |||||| ||| ||||||||| ||||||    
T  38786343 atttgcacatgttaagaagtttaaaatagtaattttgatttgaaatttgtggattttatactaaatgtgt-attttttaataaataattgtta-ttttca 38786440  T
Q  110 atgaaaagttactacttttagtt 132  Q
    || |||| |||||| ||||||||    
T  38786441 ataaaaaattactatttttagtt 38786463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39364879 - 39364955
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaata 76  Q
    |||| |||||||||||||||| ||| || ||| || ||||||||||| |||| |||||||||| |||||||||||||    
T  39364879 tcatttgcaaatttgcacatgttaacaagttttaaatagtaactttgtcttgtaacttgtgcattttatattaaata 39364955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 15863008 - 15863079
Alignment:
Q  94 taattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagac 165  Q
    ||||||||  ||||||||| |||||| ||||||||| || |  |||||||||||||||| ||||||||||||    
T  15863008 taattgttctttttcaatgtaaagttgctacttttaattcctgtaacatgtgcaatattgcacatgttagac 15863079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 24978815 - 24978693
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||| ||| |||||||||| ||| || ||||||||||| || |||||||||||||||||   |||| ||| ||||||| |||||||| | | |||||     
T  24978815 tcatgtacaagtttgcacatgttaacaagtttaaagtagttacgttgacttgaaacttgtgttttttaaatttaatatgt-aatttttaatcaataatta 24978717  T
Q  100 ttagttttcaatgaaaagttacta 123  Q
    || ||| ||||| |||||||||||    
T  24978716 ttggttctcaataaaaagttacta 24978693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 28992869 - 28992959
Alignment:
Q  83 tttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgca--atattacacatgttagacaaaccc 171  Q
    |||||| ||| |||||  || |||| ||||||||||||||||||||| ||   ||||||||||||  ||||| ||||||||||||||||||    
T  28992869 tttttattaaataattaatattttttaatgaaaagttactacttttaattgttttaacatgtgcaatatattgcacatgttagacaaaccc 28992959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41151802 - 41151743
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgt 60  Q
    |||||||||||||| ||||||||||||| ||||||||||||| ||  ||||| |||||||    
T  41151802 tcatgtgcaaatttacacatgataagaagtttaaagtagtaatttgaacttggaacttgt 41151743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 36812419 - 36812373
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaa 55  Q
    ||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  36812419 aaatttgcacatgttaagaagtttaaagtagtaactttgatttgaaa 36812373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 169
Target Start/End: Original strand, 1569215 - 1569368
Alignment:
Q  17 acatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaa 115  Q
    ||||| |||||| |||||| || ||||||||  ||| ||||||| ||||| |||||| |||||||| ||| || ||| | ||||||  |||| ||| |||    
T  1569215 acatgttaagaagtttaaaataataactttgtattggaacttgttcattttatattagatatgtaactttctaataaattattgttgttttttaataaaa 1569314  T
Q  116 agttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    | |||||| ||   ||| | |||| |||||||||||| || |||||||||||||    
T  1569315 aattactagttcgggttgctttaaaatgtgcaatattgcatatgttagacaaac 1569368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 23803055 - 23803180
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||| |||||||||||||||| |||||| |||||| ||| || ||||  ||| |||||||  |||| |||||||||||  || |||| | ||| ||||||    
T  23803055 tcatatgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtatatttcatattaaatataaaacttttgaataaataattg 23803154  T
Q  100 ttagttttcaatgaaaagttactact 125  Q
    ||  |||||||  |||||||||||||    
T  23803155 ttgtttttcaagaaaaagttactact 23803180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 29932464 - 29932533
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || ||||||||||| ||| ||||    
T  29932464 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttagaaaaatccaa 29932533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 29981618 - 29981687
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || ||||||||||| ||| ||||    
T  29981618 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttagaaaaatccaa 29981687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 41541333 - 41541406
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaa 81  Q
    ||||||||||||||||| || |||||| |||||| |||   ||||||||||| ||||| |||||||||||||||    
T  41541333 aaatttgcacatgataaaaagtttaaaatagtaaatttatattgaaacttgtacatttaatattaaatatgtaa 41541406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 43750117 - 43750052
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    |||||| |||||  ||||||||||||| |  |||||||||||||||||| | ||||||||||||||    
T  43750117 ttttcagtgaaacattactacttttagatgtcttaacatgtgcaatattgcccatgttagacaaac 43750052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 49396548 - 49396472
Alignment:
Q  2 catgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatat 77  Q
    |||||||||||||| ||||  |||||| ||||||||||||| ||||| || ||| || |||| ||||||||||||||    
T  49396548 catgtgcaaatttgtacatattaagaagtttaaagtagtaaatttgaattaaaatttatgcattttatattaaatat 49396472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 452
Target Start/End: Complemental strand, 275268 - 275229
Alignment:
Q  413 ttttaaaagttgtctataaatgattgtacaaatattattt 452  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  275268 ttttaaaagttgtcaataaatgattgtacaaatatcattt 275229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 27549711 - 27549648
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt 66  Q
    ||||||||||||||||||| ||| ||||||| |||||||| |||| |||  ||||||| |||||    
T  27549711 atgtgcaaatttgcacatgttaaaaaatttagagtagtaagtttgtcttataacttgtacattt 27549648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 53718412 - 53718313
Alignment:
Q  64 tttatattaaatatgtaaatttt-tagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgtta 162  Q
    |||||||||| |||||||||||| || ||| ||||| ||  |||| ||| |||| || |||| |||| | || |||||||||||||||||||| ||||||    
T  53718412 tttatattaagtatgtaaattttctaataaataattattgttttttaataaaaacttgctacatttaatctctttaacatgtgcaatattacaaatgtta 53718313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 54027041 - 54027103
Alignment:
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    ||||||||||| ||||||| || |||||||| || ||||||||||||||||| |||||| ||||    
T  54027041 tagttttcaataaaaagttgcttcttttagtatc-ttaacatgtgcaatattgcacatgataga 54027103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 24569324 - 24569410
Alignment:
Q  78 gtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||| |||||| ||| |||||| |  |||||||| |||||||| || || |||||  |||||||||| ||||||| |||||||||||    
T  24569324 gtaactttttaataaataattgatgtttttcaataaaaagttattatttgtagttgtcttaacatgtccaatattgcacatgttaga 24569410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2566651 - 2566586
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt 66  Q
    |||||||||||||| |||||| ||  ||||||||| |||||| ||||  ||||||||||| |||||    
T  2566651 tcatgtgcaaatttacacatgttagaaaatttaaaatagtaattttgtattgaaacttgtacattt 2566586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 7940939 - 7940838
Alignment:
Q  23 taagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaatt-gttagttttcaatgaaaagtta 120  Q
    ||||||||||||| | |||| |||| |||| ||||| || |||| ||||||||||| ||| |||||| ||| ||||| ||   |||||||||||||||||    
T  7940939 taagaaatttaaaatggtaaatttgtcttgtaacttctgtattttatattaaatatataactttttaataaataattagtgttttttcaatgaaaagtta 7940840  T
Q  121 ct 122  Q
    ||    
T  7940839 ct 7940838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 13879865 - 13879981
Alignment:
Q  50 ttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaa 148  Q
    ||||||| ||| |||||| ||||||||||||| ||||||| ||| |||||| | ||||||||| |||||||   ||||| ||||   |||| ||||| ||    
T  13879865 ttgaaacctgttcatttaatattaaatatgtatatttttaataaataattg-tggttttcaataaaaagttttcactttcagttattttaagatgtgtaa 13879963  T
Q  149 tattacacatgttagaca 166  Q
    |||| ||||| |||||||    
T  13879964 tattgcacatattagaca 13879981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 45983675 - 45983598
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatat 77  Q
    ||||||||||||||||||| | |||||| |||||| ||| || |||   ||||||||||| ||||| |||||||||||    
T  45983675 tcatgtgcaaatttgcacaggttaagaagtttaaaatagaaattttatattgaaacttgtacatttaatattaaatat 45983598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 27549589 - 27549537
Alignment:
Q  118 ttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    |||||||||||||||   |||||||||||||| || ||||| |||||||||||    
T  27549589 ttactacttttagttgttttaacatgtgcaatgttgcacatattagacaaacc 27549537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 29685940 - 29685884
Alignment:
Q  115 aagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||||||| |||||||| || |||||||||||||||| ||||  |||||| |||||    
T  29685940 aagttactaattttagttgccataacatgtgcaatattgcacagattagacgaaccc 29685884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 171
Target Start/End: Original strand, 32321764 - 32321901
Alignment:
Q  32 taaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttag 130  Q
    |||| |||||| ||||  ||||||| |||| |||| ||||||||||| ||| |||||| ||| | ||| ||  |||||||| |||||||  || ||||||    
T  32321764 taaaatagtaaatttgtattgaaacatgtgtatttcatattaaatatataa-ttttta-taaatgatttttgtttttcaat-aaaagttgatatttttag 32321860  T
Q  131 tttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||   ||||||| ||||||||||||||||||| ||||||||    
T  32321861 ttcttttaacatatgcaatattacacatgttatacaaaccc 32321901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 44567981 - 44567929
Alignment:
Q  64 tttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaa 116  Q
    |||| ||||||||| ||| |||||| |||||||| ||||||||||||| ||||    
T  44567981 tttacattaaatatataactttttaataattaatggttagttttcaataaaaa 44567929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 51401607 - 51401479
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgtt 101  Q
    |||| |||||||||||||| |||||| |||||| ||| || ||||  ||| ||||||| ||||| |||||||||||  ||| ||  | ||| ||||||||    
T  51401607 atgtacaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaaaattcaaataaataattgtt 51401508  T
Q  102 agttttcaatgaaaagttactacttttag 130  Q
      ||| |||  ||||||||||||| ||||    
T  51401507 gttttccaaaaaaaagttactactattag 51401479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 2e-56; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 6754640 - 6754474
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||| ||||||| ||||||||||    
T  6754640 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaattg 6754541  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaa 167  Q
    || | ||||||| ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  6754540 tt-ggtttcaataaaaagttactatttttagttgccttaacatgtgcaatattgcacatgttagacaa 6754474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 39150336 - 39150506
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||  ||| ||||||||||||||| |||| | ||| ||||||    
T  39150336 tcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaacttttaa-taaataattg 39150434  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  39150435 ttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaatattgcacatgttagacaaaccc 39150506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 41624998 - 41624827
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| |||||||||| |||||| ||||||| ||||||||||    
T  41624998 tcatgtgcaaatttgcatatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttttaataattaattg 41624899  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    || | ||||||| ||||||||||| |||||||| | ||||||||||||||||| |||||||||||||| ||||    
T  41624898 tt-ggtttcaataaaaagttactatttttagttgctttaacatgtgcaatattgcacatgttagacaatccca 41624827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 17919622 - 17919452
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||| || |||||  ||| ||||||||||||||| |||| | ||| ||||||    
T  17919622 tcatgtgcaaatttgcacataataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaacttttaa-taaataattg 17919524  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  17919523 ttggttttcaatgaaaagttactacttttagttgccttaacatgtacaatattgcacatgttagacaaaccc 17919452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 30363004 - 30363152
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||||||||||||||  |||||| ||||||||||    
T  30363004 tcatgtgcaaatttgcacatgataacaaatttaaaatagtaactttgacttggaacttgtgcattttatattaaatatgtaggtttttaataattaattg 30363103  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaa 148  Q
    || ||||||||| ||||||||||| |||||||  |||||||||||||||    
T  30363104 ttggttttcaataaaaagttactatttttagtagccttaacatgtgcaa 30363152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 313918 - 313748
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||  ||| ||||||||||||||  |||| |  ||| |||||    
T  313918 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaat-aattg 313820  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || ||||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  313819 ttggttttcaatcaaaaattactacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 313748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 30172048 - 30171870
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||||||| ||||||||||||| ||||||||||||||  |||||| ||| ||| |     
T  30172048 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 30171949  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaaaatt 178  Q
    ||  |||||||| |||| ||||||||||||| |  ||||||||||||||| || |||||||||||||||||||| ||||    
T  30171948 ttgtttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaacccaacaatt 30171870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 30187589 - 30187411
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||||||| ||||||||||||| ||||||||||||||  |||||| ||| ||| |     
T  30187589 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 30187490  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaaaatt 178  Q
    ||  |||||||| |||| ||||||||||||| |  ||||||||||||||| || |||||||||||||||||||| ||||    
T  30187489 ttgtttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaacccaacaatt 30187411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 1502729 - 1502899
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||  ||| || |||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  1502729 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatatataactttttgttaaataattg 1502828  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || ||||||||| |||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  1502829 tt-gttttcaataaaaatttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 1502899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 44918193 - 44918024
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| | ||| ||||| ||  ||| ||||||||||||||  |||| |  ||| |||||    
T  44918193 tcatgtgcaaatttacacatgttaagaaatttaaagtagtaactttaatttggaacttatgttttttatattaaatatgtagcttttaatcaat-aattg 44918095  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    ||  |||||||| |||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  44918094 ttgattttcaataaaaatttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaacc 44918024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 23576423 - 23576595
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||  ||||||||||  || ||| |||||||||| ||| |||||  ||| ||||||    
T  23576423 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtattaaatatataactttttgttaaataattg 23576522  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    || | ||||||| |||| ||  ||||||||||| ||||||||||||||||||| || |||||||||||||||||    
T  23576523 tt-ggtttcaataaaaacttgttacttttagttaccttaacatgtgcaatattgcagatgttagacaaacccaa 23576595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 8062370 - 8062206
Alignment:
Q  4 tgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgtta 102  Q
    |||||||||||||||||| ||| || ||||||||||||||||| | |||||| || ||  ||| ||||||||||| ||  |||||| | | ||||||||     
T  8062370 tgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaatttgaaatttatgttttttatattaaatatatag-tttttaatcaataattgttg 8062272  T
Q  103 gttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
     ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||    
T  8062271 attttcaatgaaaagttactacttttagttaccttaacatgttcaatattgcacatgttaaacaaa 8062206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 23591867 - 23591696
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||||||| || ||  |||||||  ||| ||||||| |||||  |||||||||| ||| |||||| ||| |||||     
T  23591867 tcatgtgcaaatttgcacatgttaagaaattttaaataacaactttgcattggaacttgtacattttgtattaaatatataactttttaataaataatta 23591768  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  |||||||| |||| |||||| |||||||| | |||||||||||||| || ||||||||||||||||||    
T  23591767 ttgattttcaataaaaacttactaattttagttgctttaacatgtgcaatgttgcacatgttagacaaaccc 23591696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 34802136 - 34801966
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| | |||| |||| || ||| ||||||||||| ||||||||||||||  |||||| ||| ||| |     
T  34802136 tcatgtgcaaatttgcacatgttaagaagtttaaaatggtaattttgtctggaa-cttgtgcatttcatattaaatatgtagttttttaataaataagtt 34802038  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  |||||||| |||| ||||||||||||| |  ||||||||||||||| || ||||||||||||||||||    
T  34802037 ttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaaccc 34801966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 39930812 - 39930941
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgt-gcatttatattaaatatgtaaatttttagtaattaattgtt 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    ||||||||| |||||| | |||||| ||| ||||| ||    
T  39930812 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttgaaacttgtattttttatattatatatgt-agtttttaataaataattatt 39930910  T
Q  102 agttttcaatgaaaagttactacttttagtt 132  Q
     |||||||||||||| |||||||||||||||    
T  39930911 tgttttcaatgaaaaattactacttttagtt 39930941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 39627603 - 39627752
Alignment:
Q  24 aagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttact 122  Q
    ||||| || ||| |||||| ||||  ||| ||||||||||||| ||||||||||||||| |||| | ||| | ||||||  |||||||| ||||||| ||    
T  39627603 aagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataagtgattgttgtttttcaattaaaagttgct 39627702  T
Q  123 acttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    | ||||||||||||||||||||| |||||| |||||||||||||||||||    
T  39627703 atttttagtttccttaacatgtgtaatattgcacatgttagacaaaccca 39627752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 51382447 - 51382370
Alignment:
Q  94 taattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  51382447 taattgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 51382370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 22167504 - 22167332
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||  ||| ||||||| ||||| |||||||||||  |  |||| | ||| ||||||    
T  22167504 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatataaattttttgaataaataattg 22167405  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||  |||||||  ||||||||||||| ||||||   |||||||||||||| || |||||| ||||||||||||    
T  22167404 ttgtttttcaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatggtagacaaaccca 22167332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 36490948 - 36490796
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||| ||||||||||||||| |||||| |||||| |||||||||||  ||| ||||||| |||||  |||| ||||| ||| |||||| ||| ||||||    
T  36490948 tcatgagcaaatttgcacatgttaagaagtttaaaatagtaactttgcattggaacttgtacattttgtatttaatatataactttttaataaataattg 36490849  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt 152  Q
    ||  |||||||| |||| |||||||||||| || | |||||||||||||||||    
T  36490848 ttgtttttcaataaaaacttactacttttaattgctttaacatgtgcaatatt 36490796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 6569994 - 6570120
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||   |||||||||||||||| |  ||||| | | ||||||    
T  6569994 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgt-agcttttaatcaataattg 6570092  T
Q  100 ttagttttcaatgaaaagttactacttt 127  Q
    || |||||||||||||||||| ||||||    
T  6570093 ttggttttcaatgaaaagttagtacttt 6570120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 32716195 - 32716339
Alignment:
Q  24 aagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttact 122  Q
    ||||| ||||||||||||| ||||| | | ||||||||  ||| |||||||||||||||  ||| |  ||| ||||||| |||||||| |||||||||||    
T  32716195 aagaagtttaaagtagtaattttgattaggaacttgtgttttttatattaaatatgtaacatttaatcaat-aattgtttgttttcaacgaaaagttact 32716293  T
Q  123 acttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
     | ||||||| ||||||||||||||||||| |||||||||||||||    
T  32716294 tcatttagttaccttaacatgtgcaatattgcacatgttagacaaa 32716339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 31100952 - 31101071
Alignment:
Q  11 atttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattgttagttttca 109  Q
    ||||||||||  ||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||   |||||| ||| ||| ||||  ||||||    
T  31100952 atttgcacatattaagaaatttaaagtggtaactttgacttaaaacttgtgcattttatattaaatatgttgctttttaataaataagtgttgtttttca 31101051  T
Q  110 atgaaaagttactacttttag 130  Q
    ||||||| |||||||||||||    
T  31101052 atgaaaa-ttactacttttag 31101071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 6307671 - 6307501
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||| ||  ||||| ||| |||||||| ||||  |||||| ||| |||||||||| ||| ||||||    
T  6307671 tcatgtgcaaatttgcacatgttaagaagtttaaagtaatatgtttgatttggaacttgtgtattttctattaa-tatataaatttttaataaataattg 6307573  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||| |||| || |||| |  ||||||||| | ||||||| |||||| || ||||||||||||||||||    
T  6307572 ttgttttccaataaatagttgccgcttttagttactttaacatatgcaattttgcacatgttagacaaaccc 6307501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 6180355 - 6180183
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| ||| || |||   ||| ||||||| |||||| ||||||||||  || |||| | ||| |||||     
T  6180355 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgtacatttaatattaaatataaaacttttaaataaataatta 6180256  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    | | ||| |||  ||||||||||||| ||||||   |||||||||||||| || |||||||||||||||||||    
T  6180255 taattttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaaccca 6180183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 21854139 - 21854295
Alignment:
Q  14 tgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattgttagttttcaatg 112  Q
    |||||||| ||| || |||||||| |||||||||||||| ||||||| || ||||||||||||| |||  |||| | ||| ||| ||||  ||||||||     
T  21854139 tgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtacattttatattaaataggtatcttttaaataaataaatgttgtttttcaatt 21854238  T
Q  113 aaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    |||| ||||||||||||| |  |||||||||  |||| || |||||||||||||||||    
T  21854239 aaaaattactacttttagatatcttaacatgcacaat-ttgcacatgttagacaaacc 21854295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 47355395 - 47355562
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagtttt 107  Q
    |||||| |||||| ||||||||||||| || ||| ||||  ||| ||||||| ||||| |||||||  || ||  |||||  ||| |||||||| |||||    
T  47355395 aaatttacacatgttaagaaatttaaaataataaatttgtattggaacttgttcattttatattaatgatatacctttttgataagtaattgtt-gtttt 47355493  T
Q  108 caatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaaaa 176  Q
    |||| |||||||  ||||||||||| | ||||||||||||||||| ||||| ||||| ||||| |||||    
T  47355494 caataaaaagtttatacttttagttgctttaacatgtgcaatattgcacattttagataaaccaaaaaa 47355562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 13322045 - 13321874
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||| ||| |||||| |||||| ||| || ||||  ||| || |||| |||||| ||||||||||  || |||| |  || ||||||    
T  13322045 tcatgtgcaaatttgcatatgttaagaagtttaaaatagaaattttgtattggaatttgtacatttaatattaaatataaaacttttgaaaaaataattg 13321946  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  |||||||  ||||||||||||| ||||||   ||||||||| |||| || ||||||||||||||||||    
T  13321945 ttgtttttcaagaaaaagttactactattagttgttttaacatgtacaatgttgcacatgttagacaaaccc 13321874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 30288873 - 30288995
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||||| |||||| ||||||||||||| ||| ||||| ||||||||   |||||||||||||||| |  ||||| | | ||||||    
T  30288873 tcatgtgcaaatttacacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgt-agcttttaatcaataattg 30288971  T
Q  100 ttagttttcaatgaaaagttacta 123  Q
    || |||||||||||||| ||||||    
T  30288972 ttggttttcaatgaaaaattacta 30288995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 9516750 - 9516628
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||||||||| ||||||||||||| | |||| |||  |||  |||||||| |||| ||||||||||| ||| |||||| ||| ||||||    
T  9516750 tcatgtgtaaatttgcacatgttaagaaatttaaaatggtaagtttctcttataacttgtgtattttatattaaatatataactttttaataaataattg 9516651  T
Q  100 ttagttttcaatgaaaagttact 122  Q
     |  |||||||||||||||||||    
T  9516650 gtgtttttcaatgaaaagttact 9516628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 25465327 - 25465170
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| || ||| |||||| ||||  ||| ||||||||||||| ||   |||||| ||| |||||  ||| ||||||    
T  25465327 tcatgtgcaaatttgcacatgttaagaagttcaaaatagtaaatttgcattggaacttgtgcatttaatggaaaatatttaactttttgataaataattg 25465228  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacat 158  Q
    ||  || ||||| ||||||| |||||||||||  | ||||||||||||||||| |||||    
T  25465227 ttgtttctcaat-aaaagttgctacttttagtgactttaacatgtgcaatattgcacat 25465170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 38539245 - 38539086
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttatattaaatatgtaaatttttagtaattaattgttagttttc 108  Q
    ||||||||||||| ||||||||||||||| | || |||  ||| ||| ||||  |||  ||| |||||  ||| |||||| |||| ||||| |  ||| |    
T  38539245 aaatttgcacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattc-tataaaatagataactttttaataat-aattggtgttttcc 38539148  T
Q  109 aatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    |||| |||||| |||| ||||||||||||||||||||||||||| ||||||||||| |||||    
T  38539147 aatgcaaagttgctacatttagtttccttaacatgtgcaatattgcacatgttagataaacc 38539086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 38561463 - 38561304
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttatattaaatatgtaaatttttagtaattaattgttagttttc 108  Q
    ||||||||||||| ||||||||||||||| | || |||  ||| ||| ||||  |||  ||| |||||  ||| |||||| |||| ||||| |  ||| |    
T  38561463 aaatttgcacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattc-tataaaatagataactttttaataat-aattggtgttttcc 38561366  T
Q  109 aatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    |||| |||||| |||| ||||||||||||||||||||||||||| ||||||||||| |||||    
T  38561365 aatgcaaagttgctacatttagtttccttaacatgtgcaatattgcacatgttagataaacc 38561304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 38812909 - 38812738
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| || ||| ||| || |||   ||||||||||| |||||| ||||||||||  || |||| | ||| ||||||    
T  38812909 tcatgtgcaaatttgcacatgttaagaagttcaaaatagaaattttatattgaaacttgtacatttaatattaaatataaaacttttgaataaataattg 38812810  T
Q  100 ttagttttcaatgaaaa-gttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||| | ||||| ||||||||| ||||||   ||||||||| |||| || ||||||||| ||||||||    
T  38812809 tt-gttttctaagaaaaagttactactattagttgttttaacatgtacaatgttgcacatgttaaacaaaccc 38812738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 52833491 - 52833602
Alignment:
Q  11 atttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattgttagttttca 109  Q
    |||||||||||||||||| |||||| |||||| |||||||||||| |||||   |||||| ||||||||| |  ||||| ||| |||||||| |||||||    
T  52833491 atttgcacatgataagaagtttaaaatagtaattttgacttgaaatttgtgatttttataataaatatgt-agcttttaataaataattgtttgttttca 52833589  T
Q  110 atgaaaagttact 122  Q
    ||||||| |||||    
T  52833590 atgaaaaattact 52833602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 6520816 - 6520710
Alignment:
Q  64 tttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttag 163  Q
    |||| ||||||||| ||| |||||| ||| ||||||||  ||||||| ||||||||  ||||||||||||| ||||| |||| ||||||  |||||||||    
T  6520816 tttaaattaaatatttaattttttaataaataattgttgtttttcaa-gaaaagttgttacttttagtttctttaacctgtgtaatattgtacatgttag 6520718  T
Q  164 acaaaccc 171  Q
    ||||||||    
T  6520717 acaaaccc 6520710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 7520005 - 7520175
Alignment:
Q  1 tcatgtgcaaa-tttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaatt 98  Q
    ||||||||||| ||| |||||| |||||| |||||| ||  |||||||  |||||| |||| |||||  |||| ||||| |||  ||||| ||| ||| |    
T  7520005 tcatgtgcaaaattttcacatgttaagaagtttaaaataacaactttgcattgaaatttgtacattttgtatttaatatataacattttaataaataagt 7520104  T
Q  99 gttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
     ||| |||| ||| |||| ||||||||||||||| | ||||||||||||||||| ||||| |||| |||||    
T  7520105 attattttttaataaaaatttactacttttagttgctttaacatgtgcaatattgcacattttagtcaaac 7520175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 34050317 - 34050463
Alignment:
Q  26 gaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactac 124  Q
    |||||||||| || ||| ||||  ||||||||| | ||||| ||||| ||||| ||| |||||  ||| ||||||||  |||||||| | || ||  |||    
T  34050317 gaaatttaaaataataattttgtattgaaacttttacattttatatttaatatataattttttgataaataattgttgtttttcaataataatttgttac 34050416  T
Q  125 ttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||| ||| | ||||||||||||||||| ||||||||||||||||||    
T  34050417 ttttggttgctttaacatgtgcaatattgcacatgttagacaaaccc 34050463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 12947563 - 12947660
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaat 97  Q
    |||||||| ||||| || ||| |||||| |||||| ||||||||||||||| ||||||||||| ||||||||||||| |||  |||||| ||| ||||    
T  12947563 tcatgtgcgaatttacatatggtaagaagtttaaattagtaactttgacttaaaacttgtgcattttatattaaataggtagttttttactaaataat 12947660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 3096376 - 3096292
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttt 86  Q
    ||||||||||||||||||||||| |||||||||||| ||| ||| |||| |||||| ||   ||||||||||||||||| |||||    
T  3096376 atgtgcaaatttgcacatgataaaaaatttaaagtaataattttaacttaaaacttatgttttttatattaaatatgtagatttt 3096292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 35512894 - 35512722
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| ||| || |||   ||| ||||||  |||||| ||||||||||  || |||| | ||  ||| ||    
T  35512894 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgcacatttaatattaaatataaaacttttgaatatataaatg 35512795  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||  ||| |||  ||||||||||||| ||||||   ||||||| |||||| || |||||||||||||||||||    
T  35512794 ttgttttccaagaaaaagttactactattagttgttttaacatttgcaatgttgcacatgttagacaaaccca 35512722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 13241926 - 13241828
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaatt 98  Q
    ||||||| ||||||||||||| ||||||||||||| | |||| |||| | || |||||||| |||| ||||||||||| ||| |||||| ||| |||||    
T  13241926 tcatgtgaaaatttgcacatgttaagaaatttaaaatggtaagtttgtcgtgtaacttgtgtatttcatattaaatatataattttttaataaataatt 13241828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 35438884 - 35438762
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| | |||| |||  |||  || ||||| | |||||||||||||| ||| |||||| |||  |||||    
T  35438884 tcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttatcttataatttgtgtattttatattaaatatataactttttaataaacaattg 35438785  T
Q  100 ttagttttcaatgaaaagttact 122  Q
     |  |||||||| ||||||||||    
T  35438784 gtgtttttcaattaaaagttact 35438762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 7824874 - 7825039
Alignment:
Q  8 caaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgttagttt 106  Q
    |||||||||||||| ||| || |||||| ||  || ||||   ||||| |||| |||||| ||||||||||  || |||| | ||| |||||||   |||    
T  7824874 caaatttgcacatgttaaaaagtttaaaataaaaattttgtaatgaaatttgtacatttaatattaaatataaaacttttgaataaataattgtggtttt 7824973  T
Q  107 tcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
     |||  ||||||||||||| ||||||   |||||||||||||| || |||||||||||||||||||    
T  7824974 ccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaaccca 7825039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 5057166 - 5057094
Alignment:
Q  6 tgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatat 77  Q
    |||||||||||| ||| | | || |||||||| |||||||||||||||||||||| || ||||||||||||||    
T  5057166 tgcaaatttgcaaatgttcaaaagtttaaagtggtaactttgacttgaaacttgtacattttatattaaatat 5057094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 22331698 - 22331619
Alignment:
Q  94 taattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    ||||||||  |||||||  ||||||||||||| |||| |   |||||||||||||| || ||||||||||||||||||||    
T  22331698 taattgttgtttttcaagaaaaagttactactattagatattttaacatgtgcaatgttgcacatgttagacaaacccaa 22331619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 43317556 - 43317490
Alignment:
Q  103 gttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    ||||||||  || ||||||||||||||||| | ||||||||| ||||||| |||||||| |||||||    
T  43317556 gttttcaaaaaatagttactacttttagttgctttaacatgtacaatattgcacatgtttgacaaac 43317490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 11744920 - 11745001
Alignment:
Q  83 tttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||| ||| ||||||||  |||||||| |||||||  |||||||| |||| ||||||||||||| ||| |||||| ||||    
T  11744920 tttttaataaataattgttgtttttcaataaaaagtttatacttttaatttctttaacatgtgcaacattgcacatggtaga 11745001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16966534 - 16966469
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt 66  Q
    ||||||||| ||||| ||||| |||||||||||||    ||||||||| |||||||||||||||||    
T  16966534 tcatgtgcatatttgaacatgttaagaaatttaaaccgataactttgatttgaaacttgtgcattt 16966469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 40799348 - 40799425
Alignment:
Q  81 aatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacat 158  Q
    |||||||| ||| ||||| ||| |||||||| |||||||  ||||||||||| |  |||||||||||||||| |||||    
T  40799348 aatttttaataaataatttttatttttcaataaaaagttcatacttttagttgctctaacatgtgcaatattgcacat 40799425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41676569 - 41676634
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt 66  Q
    ||||||||||||||||||||| ||||||||| ||| || ||| ||||  || ||||||||||||||    
T  41676569 tcatgtgcaaatttgcacatgttaagaaattcaaaataataattttgtattaaaacttgtgcattt 41676634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 9661962 - 9661902
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  9661962 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 9661902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10896522 - 10896462
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg 61  Q
    ||||||| ||| ||||||||| |||||| ||||||||||||||||| ||||  ||||||||    
T  10896522 tcatgtgtaaaattgcacatgttaagaagtttaaagtagtaactttaactttgaacttgtg 10896462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 23808595 - 23808432
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgttagtttt 107  Q
    ||||||||||||| |||||| ||| || ||| || ||||  ||| ||||| | |||||| ||||||||||  || |||| | ||| ||| |||| |||||    
T  23808595 aaatttgcacatgttaagaagttttaaatagaaattttgtattggaacttatacatttaatattaaatatcaaacttttgaataaataaatgtt-gtttt 23808497  T
Q  108 caatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    | | ||||| |||||||| | ||||   |||||||||||||| ||  ||||||||||||||||||    
T  23808496 ccaagaaaaattactactatcagttattttaacatgtgcaatgttgtacatgttagacaaaccca 23808432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 42589238 - 42589178
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  42589238 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 42589178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 44007547 - 44007599
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg 61  Q
    ||||||||||||| |||||| |||||||||| |||||| ||||| ||||||||    
T  44007547 aaatttgcacatgttaagaagtttaaagtagcaactttaacttggaacttgtg 44007599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 44012991 - 44012931
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  44012991 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 44012931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 2222245 - 2222375
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcat--ttatattaaatatgtaaatttttagtaattaatt 98  Q
    ||||||| |||||| |||||| ||||||||||||  || |||||||  ||| ||||||||| ||  | ||||||||||  ||  |||||| ||| |||||    
T  2222245 tcatgtgaaaatttacacatgttaagaaatttaa--taataactttatcttaaaacttgtgtattatgatattaaatagttagctttttaataaataatt 2222342  T
Q  99 gttagttttcaatgaaaagttactacttttagtt 132  Q
     ||  |||||||| ||||||||||||||||||||    
T  2222343 attgtttttcaat-aaaagttactacttttagtt 2222375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 36578383 - 36578332
Alignment:
Q  118 ttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    |||||||||||| || | ||||||||||||||||| ||||||||||| ||||    
T  36578383 ttactacttttaattgctttaacatgtgcaatattgcacatgttagataaac 36578332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 399544 - 399602
Alignment:
Q  113 aaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||| ||||||| ||||||| |  |||||||||||||||| | ||||||||||||||||    
T  399544 aaaaattactacgtttagttgctataacatgtgcaatattgcgcatgttagacaaaccc 399602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 33694222 - 33694275
Alignment:
Q  405 gagagttgttttaaaagttgtctataaatgattgtacaaatattatttttctta 458  Q
    |||||||||||||||||||||  | || ||||||||||||||| |||| |||||    
T  33694222 gagagttgttttaaaagttgttaaaaagtgattgtacaaatatcatttctctta 33694275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 457
Target Start/End: Original strand, 38520017 - 38520066
Alignment:
Q  408 agttgttttaaaagttgtctataaatgattgtacaaatattatttttctt 457  Q
    |||||||| |||||||||| |  |||||||||||||||||||||| ||||    
T  38520017 agttgtttcaaaagttgtcaaataatgattgtacaaatattatttctctt 38520066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 51920440 - 51920609
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||| ||||||||| ||| || |||   || ||| ||||  |||| |||||||||||  || |||| | ||| ||||||    
T  51920440 tcatgtgcaaatttgcacatgttaataaatttaaaatagaaattttatattaaaatttgtatatttaatattaaatataaaacttttgaataaataattg 51920539  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    ||  |||||||  |||| |||||||| ||| ||   |||||||||  ||| |||||||  ||||||||||    
T  51920540 ttgtttttcaaaaaaaaattactactattaattgttttaacatgtataatgttacacactttagacaaac 51920609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 4249273 - 4249225
Alignment:
Q  103 gttttcaatgaaaagttactacttttagtttccttaacatgtgcaatat 151  Q
    ||||||||| ||||||  || |||||||| |||||||||||||||||||    
T  4249273 gttttcaataaaaagtcgcttcttttagtatccttaacatgtgcaatat 4249225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 19348860 - 19348920
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttata 69  Q
    |||||||||  || |||||| |||||||||||| |||| |||||||| |||| ||||||||    
T  19348860 aaatttgcatgtgttaagaagtttaaagtagtagctttaacttgaaatttgttcatttata 19348920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 52788 - 52958
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||  |||  |||||||||||||| |||| |  ||| |||||    
T  52788 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaat-aattg 52886  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  52887 ttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 52958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 145846 - 145676
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||  |||  |||||||||||||| |||| |  ||| |||||    
T  145846 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaat-aattg 145748  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  145747 ttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 145676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 2 - 169
Target Start/End: Original strand, 1017788 - 1017956
Alignment:
Q  2 catgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgt 100  Q
    |||||| |||||| |||||| |||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||| |||||||    
T  1017788 catgtgtaaatttacacatgttaagaagtttaaagtagtaactttgacttgaaagttgtgcattttatattaaatatgtaaatttttaataaataattgt 1017887  T
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    | |||||||| |||||||||||||||||||||   | | |||||||| |||| ||||||||||||||||    
T  1017888 tggttttcaacgaaaagttactacttttagttatttaatcatgtgcagtattgcacatgttagacaaac 1017956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 31169772 - 31169940
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||  |||||| |||||||||     
T  31169772 tcatgtgtaaatttgcacatgttaacaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatatgtaggtttttaataattaatta 31169871  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    || |||||||| ||||| |||||| |||||||  |||||||||||||||  || |||| ||||||||||    
T  31169872 ttggttttcaaagaaaaattactatttttagtagccttaacatgtgcaagtttgcacaggttagacaaa 31169940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 6017025 - 6016854
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||| || |||||||| |||||||||||||| ||||||||||||| ||||||||||| ||| ||||||  || ||| ||    
T  6017025 tcatgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatataactttttaaaaaataagtg 6016926  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||||||||||||||||||||||||||| |  |||| |||||||||| || ||||||||||||||||||    
T  6016925 ttgtttttcaatgaaaagttactacttttagatgtcttaccatgtgcaatgttgcacatgttagacaaaccc 6016854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 8977475 - 8977648
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| |||||||||| || |||||| || ||| |||||| ||||  ||| ||||||||||||| ||||||||||||||| |||| | ||| | ||||    
T  8977475 tcatgtgtaaatttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataaatgattg 8977574  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    ||  |||||||| ||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8977575 ttgtttttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcacatgttagacaaacccaa 8977648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 28943778 - 28943954
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||  ||| ||||||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  28943778 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 28943877  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaaaat 177  Q
    || |||| |||| |||| || ||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  28943878 ttggttt-caataaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgttagacaaacccaaaaat 28943954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 24 - 170
Target Start/End: Original strand, 5362925 - 5363071
Alignment:
Q  24 aagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttact 122  Q
    ||||| ||||||||||||||||| ||||| ||||||||  ||| ||||||||||||||  |||| |  ||  ||||||| ||||||||||||||||||||    
T  5362925 aagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaac-aattgttggttttcaatgaaaagttact 5363023  T
Q  123 acttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  5363024 acttttagttaccttaacatgtgcaatattgcacatgttagacaaacc 5363071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 14228135 - 14228305
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||  ||| ||||||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  14228135 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 14228234  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||| |||| |||| || ||||||||| || ||||||||||||||||||| ||||||||||||||||||    
T  14228235 ttggttt-caataaaaacttgctacttttaattaccttaacatgtgcaatattgcacatgttagacaaaccc 14228305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 17596510 - 17596385
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||| ||| |||||||||| |||||||||| |||||| ||||||| ||||||||||    
T  17596510 tcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgatttggaacttgtgcattttatattaactatgtagatttttaataattaattg 17596411  T
Q  100 ttagttttcaatgaaaagttactactt 126  Q
    || | ||||||| ||||||||||||||    
T  17596410 tt-ggtttcaataaaaagttactactt 17596385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 10887198 - 10887026
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||||| |||| ||||| ||| |||||||| |||| ||||||||||||||  |||||| ||| ||| |     
T  10887198 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgatttggaacttgtgtattttatattaaatatgtagctttttaataaataagtt 10887099  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||  |||||||| |||| ||||||||||||| |  ||||||||||||||| || |||||||||||||| ||||    
T  10887098 ttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaacccca 10887026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 73 - 171
Target Start/End: Original strand, 26602512 - 26602610
Alignment:
Q  73 aatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||||||| |||||| |||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  26602512 aatatgtaagtttttaataattaattgttggttttcagtgaaaaattactacttttagtttccttaatatgtgcaatattgcacatgttagacaaaccc 26602610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 31069591 - 31069738
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||||| |||||| |||||| |||||||||||||||| ||||||||   |||||||||||||||| ||  |||| | | ||||||    
T  31069591 tcatgtgcaaatttacacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgt-aacatttaatcaataattg 31069689  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaa 148  Q
    || ||||||||| |||| ||||||||||||||| |||||||||||||||    
T  31069690 ttggttttcaataaaaacttactacttttagttaccttaacatgtgcaa 31069738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 17552596 - 17552766
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||||||||||||| |||||| | ||  ||| ||||||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  17552596 tcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattatgcattggaacttgaacattttgtattaaatatataattttttgttaaataattg 17552695  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||| | || |||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  17552696 ttggttt-cgataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 17552766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 18332697 - 18332868
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||||| |||||| ||||||||  ||| ||||||||| ||||| ||||||| ||||||||||| ||  |||||| ||| ||| |     
T  18332697 tcatgtgcaaattttcacatgttaagaagtttaaagtgataattttgacttggaacttatgcatttcatattaaatatatagctttttaataaataagtt 18332796  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  |||||||| |||| ||||||||||||| |  ||||||||||||||| || ||||||||||||||||||    
T  18332797 ttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaaccc 18332868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 29863311 - 29863482
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| ||||||  |||  | | ||||| ||||||| ||||||| |||  || |||||| ||| |||||     
T  29863311 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaaaattgtgtcggaacttttgcattttatattaactataaaactttttaataaataatta 29863410  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||||||||| |||||||||| |||||||| | ||||||||||||||||| ||||||||||||||||||    
T  29863411 ttctttttcaatgtaaagttactatttttagttcctttaacatgtgcaatattgcacatgttagacaaaccc 29863482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 33017891 - 33017723
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgtt 101  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||||  | | ||||||  |||||  |||||||||| ||| |||||  ||| ||||||||    
T  33017891 atgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatatataactttttgttaaataattgtt 33017792  T
Q  102 agttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
     ||||| ||| |||| || ||| |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  33017791 ggtttt-aataaaaacttgctaattttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 33017723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 2830690 - 2830857
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||| |||||||||||||| |||||| |||||| || ||||||| | ||  || |||||   |||||||||||||||| |  ||||| | | ||||||    
T  2830690 tcatgtacaaatttgcacatgttaagaagtttaaaataataactttaatttagaatttgtgttttttatattaaatatgt-agcttttaatcaataattg 2830788  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||    
T  2830789 ttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatactgtacatgttagacaaa 2830857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 23 - 150
Target Start/End: Original strand, 22974604 - 22974731
Alignment:
Q  23 taagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttac 121  Q
    |||||| |||||| |||||||||| ||||| ||||||||  ||| ||||||||||||||| |||| |  ||| |||||||  ||||||||||||||||||    
T  22974604 taagaagtttaaaatagtaactttaacttggaacttgtgttttttatattaaatatgtaacttttaatcaat-aattgttgattttcaatgaaaagttac 22974702  T
Q  122 tacttttagtttccttaacatgtgcaata 150  Q
    ||||||||||| |||||||||||||||||    
T  22974703 tacttttagttaccttaacatgtgcaata 22974731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 23 - 150
Target Start/End: Complemental strand, 23813797 - 23813670
Alignment:
Q  23 taagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttac 121  Q
    |||||| |||||| |||||||||| ||||| ||||||||  ||| ||||||||||||||| |||| |  ||| |||||||  ||||||||||||||||||    
T  23813797 taagaagtttaaaatagtaactttaacttggaacttgtgttttttatattaaatatgtaacttttaatcaat-aattgttgattttcaatgaaaagttac 23813699  T
Q  122 tacttttagtttccttaacatgtgcaata 150  Q
    ||||||||||| |||||||||||||||||    
T  23813698 tacttttagttaccttaacatgtgcaata 23813670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 31790925 - 31791096
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatt-tatattaaatatgtaaatttttagtaattaattg 99  Q
    |||| |||||||||||||||  ||||||||||||| | | || |||| |||||||||| || ||| ||||||||||| | ||  ||||| |||| ||||     
T  31790925 tcatatgcaaatttgcacatattaagaaatttaaaatggcaagtttgtcttgaaacttatgtattctatattaaataggaaacgttttaataat-aatta 31791023  T
Q  100 ttagttttcaatgaaaagttactacttttagtttcctt-aacatgtgcaatattacacatgttagacaaaccc 171  Q
     |  |||||||| |||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  31791024 gtgtttttcaataaaaagttactacatttagtttcctttaacatgtgcaatattgcacatgttagacaaaccc 31791096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 31568278 - 31568111
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||| ||||||||||||   |||||| ||||||||||  |||| | |||  |||||    
T  31568278 tcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttgatttgaaacttgtgttttttataataaatatgtagcttttgaataa-aaattg 31568180  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  |||||||| |||||   ||||| ||  || ||||||||||||||||||| ||| ||||||||||||||    
T  31568179 ttgattttcaataaaaag---ctactcttgattaccttaacatgtgcaatattgcacgtgttagacaaaccc 31568111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 34692523 - 34692352
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| ||| || ||||  ||| ||||||| ||||| |||||||||||  || |||| | ||| |||||     
T  34692523 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttaaataaataatt- 34692425  T
Q  100 ttagtttt-caatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
     ||||||| |||  ||||||||||||| ||||||   |||||||||||||| || ||||||||||||||||||    
T  34692424 atagttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 34692352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3853112 - 3853051
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgc 62  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||    
T  3853112 tcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaagttgtgc 3853051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 31503909 - 31503748
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgta-aatttttagtaattaattgt 100  Q
    ||||||||||||||||||| |||||||||||||||||||| |||   ||| |||||||| | |||||||||||||| ||   |||||| |||  || |||    
T  31503909 atgtgcaaatttgcacatgttaagaaatttaaagtagtaagtttatattggaacttgtgtattttatattaaatatatattctttttaataa-caactgt 31503811  T
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
     | |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  31503810 ga-ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 31503748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 30623473 - 30623324
Alignment:
Q  23 taagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttac 121  Q
    |||||| |||||| ||| || ||||  ||||||||||| ||||| |||||||||||  || |||| | ||| ||||||||  |||||||  |||||||||    
T  30623473 taagaagtttaaaatagaaattttgtattgaaacttgtacatttgatattaaatataaaacttttgaataaataattgttgtttttcaagaaaaagttac 30623374  T
Q  122 tacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||| ||||||   |||||||||| ||| || ||||||||||||||||||    
T  30623373 tactattagttgttttaacatgtgtaatgttgcacatgttagacaaaccc 30623324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 17154784 - 17154620
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatt-tatattaaatatgtaaatttttagtaattaattgttagtttt 107  Q
    |||||| |||||| ||| ||||||||| || ||  ||||  |||||||||||| ||| |||||||||| | ||| |||||| ||||| ||| ||  ||||    
T  17154784 aaatttacacatgttaaaaaatttaaaataataggtttgttttgaaacttgtgtattctatattaaatgtataattttttaataattgattattgttttt 17154685  T
Q  108 caat-gaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||  |||| ||| |||||||| |||| ||||||||| ||||||| |||||||| |||||||||    
T  17154684 caataaaaaaattaatacttttaatttctttaacatgtacaatatttcacatgtttgacaaaccc 17154620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 27819636 - 27819807
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||| |||||||||||||| |||||| |||||| | |||  |||| ||| |||||| | ||||| ||| ||||||||||| |||||| ||| |   ||    
T  27819636 tcatgtacaaatttgcacatgttaagaagtttaaaattgtatttttgtcttaaaacttattcattttatactaaatatgtaactttttaataaattgatg 27819735  T
Q  100 ttagttttcaatgaaaa--gttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    || ||||||||| ||||  |||| || |||||||| | |||| |||||||||||| ||||| ||||||||||    
T  27819736 ttggttttcaataaaaaatgttaatatttttagttgctttaatatgtgcaatattgcacatcttagacaaac 27819807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 17596369 - 17596315
Alignment:
Q  113 aaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaa 167  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  17596369 aaaagttactacttttagttgtcttaacatgtgcaatattgcacatgttagacaa 17596315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 32615572 - 32615640
Alignment:
Q  104 ttttcaatgaaaagttacta---cttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    ||||||||||||||||||||   ||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  32615572 ttttcaatgaaaagttactagtacttttagttaccttaacatatgcaatattacacatgttaaacaaac 32615640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 174
Target Start/End: Complemental strand, 12454132 - 12454061
Alignment:
Q  103 gttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaa 174  Q
    ||||||||| |||| ||||||| |||| ||| |||||||||||||||||| ||||||||| |||||| ||||    
T  12454132 gttttcaataaaaaattactacatttaattttcttaacatgtgcaatattgcacatgttacacaaactcaaa 12454061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 10345671 - 10345720
Alignment:
Q  123 acttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    |||||||||||| ||||||||||||||||| ||||||||||||| |||||    
T  10345671 acttttagtttctttaacatgtgcaatattgcacatgttagacagaccca 10345720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 1814912 - 1814960
Alignment:
Q  122 tacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    ||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  1814912 tacttttagttgctttaacatgtgcaatattgcacatgttagacaaacc 1814960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 2086949 - 2086996
Alignment:
Q  105 tttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt 152  Q
    |||||||||||| |||||||||||| || |||||||||||||||||||    
T  2086949 tttcaatgaaaaattactacttttaattaccttaacatgtgcaatatt 2086996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 3485677 - 3485776
Alignment:
Q  70 ttaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    |||||||| ||| |||||| ||||| ||| ||  |||||||| ||||| | ||| |||||||| | ||||||| || ||||||||| |||||||||||||    
T  3485677 ttaaatatataactttttaataattgattattgtttttcaataaaaaggtgctaattttagttcctttaacatatgtaatattacatatgttagacaaac 3485776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 3850654 - 3850577
Alignment:
Q  66 tatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgt 144  Q
    |||||||||||||||| |||| |  ||| |||| ||  |||||||||||||||| |||||||||||| |||||||||||    
T  3850654 tatattaaatatgtaacttttaatgaat-aattattgattttcaatgaaaagttgctacttttagttgccttaacatgt 3850577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 17141444 - 17141315
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||| ||| |||||  |||||  |||||| |||| |||  ||||||  ||||| ||||||||||||||  |||||| ||| | ||||    
T  17141444 tcatgtgcaaatttgcatatgttaagatgtttaagatagtaattttgtcttagaacttgctcattttatattaaatatgtagctttttaataaattattg 17141345  T
Q  100 ttagttttcaatgaaaagttactactttta 129  Q
    ||  |||| ||| |||||| ||||||||||    
T  17141344 ttgttttttaataaaaagtaactactttta 17141315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 167
Target Start/End: Complemental strand, 31039843 - 31039706
Alignment:
Q  31 ttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactactttta 129  Q
    |||||||||||  ||||  ||| |||||||| ||||  ||||| | || ||| |||||| ||| ||||| ||  |||||||| || |||||||| |||||    
T  31039843 ttaaagtagtatgtttgtattgtaacttgtgtattttctattataaatataactttttaataaataatttttgtttttcaataaatagttactattttta 31039744  T
Q  130 gtttccttaacatgtgcaatattacacatgttagacaa 167  Q
     || | |||||| ||||||||||| |||||||||||||    
T  31039743 attactttaacacgtgcaatattaaacatgttagacaa 31039706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 29730384 - 29730276
Alignment:
Q  63 atttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgtta 162  Q
    ||||||||||||||| ||| |||||| ||| ||| ||||  |||||||| |||| ||| || ||||| |  | ||||||| |||||||||| | |||| |    
T  29730384 atttatattaaatatataactttttaataaataactgttgtttttcaataaaaacttattaattttaatagctttaacatatgcaatattatatatgtca 29730285  T
Q  163 gacaaaccc 171  Q
    |||||||||    
T  29730284 gacaaaccc 29730276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 30591172 - 30591320
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||| |||||| |||||| ||| || | |||| ||||  ||| |||||||  ||||  |||||||| | ||| |||||  ||| ||||||    
T  30591172 tcatgtgcaaatttacacatgttaagaagttttaaatggtaattttgcattgtaacttgtatattttgtattaaatgtataactttttgataaataattg 30591271  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaa 148  Q
    |   |||||||| |||| ||||||| ||||||| | |||||||||||||    
T  30591272 tattttttcaataaaaacttactacatttagttgcgttaacatgtgcaa 30591320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 34733813 - 34733873
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  34733813 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 34733873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 24979262 - 24979329
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||||||  ||||||||||| | ||||||   |||||||||||||| || ||||||||||||||||||    
T  24979262 ttttcaagaaaaagttactattattagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 24979329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 28757617 - 28757664
Alignment:
Q  122 tacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    |||||||| || | ||||||||||||||| ||||||||||||||||||    
T  28757617 tacttttaattgctttaacatgtgcaatactacacatgttagacaaac 28757664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 29065434 - 29065587
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||| ||||||||| ||| || |||||| ||||||  |||  | | ||||  ||||||| ||||||||||| | |||||||| ||| |||||     
T  29065434 tcatgtgcaaacttgcacatgttaaaaagtttaaaatagtaatattgtatcggaactaatgcatttcatattaaatatat-aatttttaataaataattt 29065532  T
Q  100 tt--agttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt 152  Q
    ||    ||||||||| ||||||| ||||| ||||| | |||||||||||||||||    
T  29065533 tttcttttttcaatgtaaagttattacttgtagttcctttaacatgtgcaatatt 29065587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 29120287 - 29120440
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||| ||||||||| ||| || |||||| ||||||  |||  | | ||||  ||||||| ||||||||||| | |||||||| ||| |||||     
T  29120287 tcatgtgcaaacttgcacatgttaaaaagtttaaaatagtaatattgtatcggaactaatgcatttcatattaaatatat-aatttttaataaataattt 29120385  T
Q  100 tt--agttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt 152  Q
    ||    ||||||||| ||||||| ||||| ||||| | |||||||||||||||||    
T  29120386 tttcttttttcaatgtaaagttattacttgtagttcctttaacatgtgcaatatt 29120440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23936385 - 23936483
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaatt 98  Q
    ||||||||||||||||||||| ||| || |||||  ||||||||||   ||| ||||||| || |||||||||||||  ||| |||||| ||| |||||    
T  23936385 tcatgtgcaaatttgcacatgttaacaagtttaacatagtaactttcttttggaacttgtacattttatattaaatacataactttttaataaataatt 23936483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 170
Target Start/End: Original strand, 2086999 - 2087032
Alignment:
Q  137 taacatgtgcaatattacacatgttagacaaacc 170  Q
    |||||||||||||||| |||||||||||||||||    
T  2086999 taacatgtgcaatattgcacatgttagacaaacc 2087032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 26602478 - 26602511
Alignment:
Q  18 catgataagaaatttaaagtagtaactttgactt 51  Q
    ||||||||||| ||||||||||||||||||||||    
T  26602478 catgataagaagtttaaagtagtaactttgactt 26602511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 29061095 - 29061143
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt 152  Q
    ||||||||| ||||||| ||||| ||||| | |||||||||||||||||    
T  29061095 ttttcaatgtaaagttattacttgtagttcctttaacatgtgcaatatt 29061143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 29074552 - 29074600
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt 152  Q
    ||||||||| ||||||| ||||| ||||| | |||||||||||||||||    
T  29074552 ttttcaatgtaaagttattacttgtagttcctttaacatgtgcaatatt 29074600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 29079316 - 29079364
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt 152  Q
    ||||||||| ||||||| ||||| ||||| | |||||||||||||||||    
T  29079316 ttttcaatgtaaagttattacttgtagttcctttaacatgtgcaatatt 29079364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 29107125 - 29107173
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt 152  Q
    ||||||||| ||||||| ||||| ||||| | |||||||||||||||||    
T  29107125 ttttcaatgtaaagttattacttgtagttcctttaacatgtgcaatatt 29107173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 8e-47; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7349857 - 7349687
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||||||  ||| ||||||||||||||| |||| |  ||| |||||    
T  7349857 tcatgtgtaaatttgtacatgataagaagtttaaagtagtaactttgacttaaaacttgtgttttttatattaaatatgtaacttttaacaaat-aattg 7349759  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  7349758 ttggttttcaatgaaaagttattacttttagttgccttaacatgtgcaatattgcacgtgttagacaaaccc 7349687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 47326901 - 47327072
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||||||| ||||||||||||||  |||||| ||| ||| |     
T  47326901 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgtagttttttaataaataagtt 47327000  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||||||||||||| ||||||||||||| |  ||||||||||||||| || |||| |||||||||||||    
T  47327001 ttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacaggttagacaaaccc 47327072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 47341697 - 47341868
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||||||| ||||||||||||||  |||||| ||| ||| |     
T  47341697 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgtagttttttaataaataagtt 47341796  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||||||||||||| ||||||||||||| |  ||||||||||||||| || |||| |||||||||||||    
T  47341797 ttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacaggttagacaaaccc 47341868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 4 - 171
Target Start/End: Original strand, 8736823 - 8736990
Alignment:
Q  4 tgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgtta 102  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||| |||||| ||| ||| | ||     
T  8736823 tgtgtaaatttgcacatgttaagaaatttaaagtggtaactttgacttggaact-gtgcatttcatattaaatatgtaactttttaataaataagttttg 8736921  T
Q  103 gttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
     |||||||| |||| ||||||||||||| |  ||||||||||||||| || ||||||||||||||||||    
T  8736922 tttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaaccc 8736990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 16667393 - 16667564
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |  ||| ||| |||||||||||||| |||| ||||||||||||||  |||||| ||| ||| ||    
T  16667393 tcatgtgcaaatttgcacatgttaagaagtttaaaatgataattttaacttgaaacttgtgtattttatattaaatatgtagctttttaataaataagtg 16667492  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||||||||||||| ||||||||||||| |  ||||||||||||||| || ||||||||||||||||||    
T  16667493 ttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaaccc 16667564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 54495646 - 54495817
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||| ||||| ||||||||||||| ||||||||||||||  |||||| ||| ||| |     
T  54495646 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttaacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 54495745  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  |||||||  |||| ||||||||||||| |  ||||||||||||||| || ||||||||||||||||||    
T  54495746 ttgtttttcaaaaaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaaccc 54495817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 34941447 - 34941275
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||| ||||||||||||||||||| |||||| |||||| ||||  ||| ||||||| |||||  |||| ||||| ||| |||||| ||| || |||    
T  34941447 tcatgtgcgaatttgcacatgataagaagtttaaaatagtaattttgcattggaacttgtacattttgtatttaatatataactttttaataaatagttg 34941348  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||  |||||||| |||||||  ||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  34941347 ttgtttttcaataaaaagttgttacttttagttaccttaatatgtgcaatattacacatgttagacaaaccca 34941275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 49181241 - 49181074
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||| || |||||| || ||| |||||| ||||  ||| ||||||||||||| ||||||||||||||| |||| | ||| | ||||    
T  49181241 tcatgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaataaatgattg 49181142  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaa 167  Q
    ||  |||||||| ||| ||| |||||||||||||||||||||||||||||||| ||||| ||||||||    
T  49181141 ttgtttttcaattaaaggttgctacttttagtttccttaacatgtgcaatattgcacattttagacaa 49181074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 29190825 - 29190982
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||||||| ||||||||  ||| ||||||||||||  ||  |||| | | ||||||    
T  29190825 tcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacttgtgtttttaatattaaatatg-caacatttaatcaataattg 29190923  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacat 158  Q
    || |||||||||||||| ||||||||||||||| ||||||||| ||||||||| |||||    
T  29190924 ttggttttcaatgaaaaattactacttttagttaccttaacatatgcaatattgcacat 29190982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 50352471 - 50352301
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    |||| |||||||||||||||| ||||||||||||| |||||| ||||  ||| ||||||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  50352471 tcatatgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaacttgaacattttgtattaaatatataactttttgttaaataattg 50352372  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||| |||| |||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  50352371 ttggttt-caataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaaccc 50352301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 9759151 - 9759320
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    |||||| |||||||||||||| ||||||||||||| |||||||||||  ||| || |||  |||||  |||||||||| ||| |||||  ||| ||||||    
T  9759151 tcatgtacaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaagttgaacattttgtattaaatatataactttttgttaaataattg 9759250  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    || |||| |||| |||| || |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  9759251 ttggttt-caataaaaacttgctacttttagttaccttaacatgtgcaatattgcacatgttagacaaacc 9759320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 41415566 - 41415703
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||   |||||||||||||||| |  ||||| ||| ||||||    
T  41415566 tcatgtgcaaatttgcacatgataataagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgt-agcttttaataaataattg 41415664  T
Q  100 ttagttttcaatgaaaagttactacttttagtttcctta 138  Q
    ||  |||||||| |||||||||||||||||||| |||||    
T  41415665 ttgattttcaattaaaagttactacttttagttgcctta 41415703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 17409993 - 17409820
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||  ||| ||||||| |||||| ||||||||||  |  |||| | ||| ||||||    
T  17409993 tcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatataaattttttgaataaataattg 17409894  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    ||  |||||||  ||||||||||||| ||||||   |||||||||||||| || ||||||||||||||||||||    
T  17409893 ttgtttttcaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaacccaa 17409820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 23553739 - 23553571
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgt-gcatttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||| |||| ||| ||||    |||||||||||||||| | |||||| | | ||||||    
T  23553739 tcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaatatgt-agtttttaatcaataattg 23553641  T
Q  100 ttagttttcaat-gaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    || |||||||||  |||| |||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  23553640 ttggttttcaataaaaaaattactatttttagttaccttaacatgtgcaatattgcacatgttagacaaa 23553571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 40049725 - 40049556
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttat-attaaatatgtaaatttttagtaattaattgtt 101  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||  ||| |||||   ||||| | ||||||||| ||| |||||  ||| ||||||||    
T  40049725 atgtgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaactttaacattttttattaaatatataattttttgttaaataattgtt 40049626  T
Q  102 agttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
     |||| | || |||| ||||||||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  40049625 ggttt-ctataaaaacttactacttttagttactttaacatgtgcaatattgcacatgttagacaaaccca 40049556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 10389279 - 10389446
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgtt 101  Q
    ||||| ||||||||||||| ||| |||||| ||||||||| ||||||||  ||||||||  ||| |||| |||||||||| |||| |  ||| |||||||    
T  10389279 atgtgtaaatttgcacatgttaaaaaatttcaagtagtaattttgacttagaacttgtgttttttatatgaaatatgtaacttttaatcaat-aattgtt 10389377  T
Q  102 agttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
     ||||||||| |||||||| ||||||||||| |  ||||||||| |||||| |||||||||||||||||    
T  10389378 ggttttcaattaaaagttaatacttttagttactataacatgtgtaatattgcacatgttagacaaacc 10389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 35999956 - 36000117
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatttatattaaatatgtaaatttttagtaattaattgt 100  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||| |||||     |||   |||||||||||||||||  |||| |  ||| ||||||    
T  35999956 tcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttg-----tgttt-tttatattaaatatgtagcttttaatcaat-aattgt 36000048  T
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    | ||||||||| |||||||||||||||||||| ||||||||||| ||||||| || |||||||| ||||    
T  36000049 tggttttcaataaaaagttactacttttagttaccttaacatgtacaatattgcatatgttagataaac 36000117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 23051391 - 23051477
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttt 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||| ||||    
T  23051391 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgttttttatataaaatatgtaactttt 23051477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 4 - 172
Target Start/End: Complemental strand, 2097037 - 2096868
Alignment:
Q  4 tgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgtta 102  Q
    |||| ||||||||||||| |||||| || ||| | |||| ||||  ||| ||||||||||||| ||||||||||| ||| |||||| ||| ||||||||     
T  2097037 tgtgaaaatttgcacatgttaagaagttcaaaatggtaagtttgtattggaacttgtgcattttatattaaatatataactttttaataaataattgttg 2096938  T
Q  103 gttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
     |||||||| |||||||   ||||||||||   ||||| ||||||||||| |||||||||||||||||||    
T  2096937 tttttcaataaaaagttgtcacttttagttgatttaacttgtgcaatattgcacatgttagacaaaccca 2096868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 19468361 - 19468193
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgtt 101  Q
    ||||||||||||||||||| |||||| |||||| ||| || ||||  ||||||||||| |||||| ||||||||||  || |||| | ||| ||||||||    
T  19468361 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttgaataaataattgtt 19468262  T
Q  102 agttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
      ||| |||  ||||||||||||| ||||||   |||||||||||||| || |||||||||||||||||    
T  19468261 gttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaacc 19468193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 39876999 - 39876848
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||||  ||| ||||||  |||||  ||| |||||| ||| |||||  ||| ||||||    
T  39876999 tcatgtgtaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtatcaaatatataactttttgttaaataattg 39876900  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt 152  Q
    || |||| |||| |||| ||||||||||||||| |||||||||||||||||||    
T  39876899 ttggttt-caataaaaacttactacttttagttaccttaacatgtgcaatatt 39876848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 49228431 - 49228355
Alignment:
Q  95 aattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  49228431 aattgttggttttcaatgaaaagttactacttttagttaccttaacatatgcaatattgcacatgttagacaaaccc 49228355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 27362560 - 27362389
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||||| |||| ||||||||| || |||||||||| ||||||||||||||  |||||  ||| ||| |     
T  27362560 tcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaatttgtgcatttcatattaaatatgtagctttttgataaataagtt 27362461  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  |||||||| |||| ||||||||||||| |  |||||||| |||||| || |  |||||||| ||||||    
T  27362460 ttgtttttcaataaaaaattactacttttagatatcttaacatatgcaatgttgcgtatgttagataaaccc 27362389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 27756730 - 27756561
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatt-tatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||| ||||||| || ||| ||||||||||||||||| || |||| ||||||||||||  ||| |||||||||||  ||| |||||| |||| |||||    
T  27756730 tcatgtacaaatttacaaatgttaagaaatttaaagtagcaagtttgtcttgaaacttgtatattctatattaaatagataactttttaataat-aattg 27756632  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt--acacatgttagacaaa 168  Q
     |  ||| ||||| |||||| |||| |||||||||||||||||||||||||||  |||||| |||||||||    
T  27756631 gtgttttccaatgcaaagttgctacatttagtttccttaacatgtgcaatattgcacacatattagacaaa 27756561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 52391467 - 52391296
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||||||||| |||||| |||||| ||| || ||||  ||| ||||||| |||||| ||||||||||  || |||| | ||| ||||||    
T  52391467 tcatgtgtaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaataattg 52391368  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  |||||||  ||||||||||||| ||||||   ||||||||||||| ||||||||| ||||||||||||    
T  52391367 ttgtttttcaaaaaaaagttactactattagttattttaacatgtgcaacattacacatattagacaaaccc 52391296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 10813503 - 10813655
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaa-tatgtaaatttttagtaattaatt 98  Q
    ||||||||| ||||||| ||||||| || |||||||||||||||||||||| ||| |||||  ||| | |||||| ||||||| |||| |  ||| ||||    
T  10813503 tcatgtgcagatttgcatatgataataagtttaaagtagtaactttgacttaaaatttgtgttttttaaattaaaatatgtaacttttaacaaat-aatt 10813601  T
Q  99 gttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt 152  Q
    ||| ||||||||| |||||||| ||||||||||| ||||||||| |||||||||    
T  10813602 gttggttttcaataaaaagttattacttttagttgccttaacatatgcaatatt 10813655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 53961488 - 53961350
Alignment:
Q  4 tgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattgtta 102  Q
    |||||||||||||||||| |||||| |||||| |||||| |||||||||||| |||||   ||||||||||||||||||  ||| |  || ||||||||     
T  53961488 tgtgcaaatttgcacatgttaagaagtttaaattagtaattttgacttgaaatttgtgttttttatattaaatatgtaacatttaaacaa-taattgttg 53961390  T
Q  103 gttttcaatgaaaagttactacttttagtttccttaacat 142  Q
     ||||||||||||| ||||||||||||||| | |||||||    
T  53961389 attttcaatgaaaaattactacttttagttactttaacat 53961350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 167
Target Start/End: Original strand, 19450911 - 19451076
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgtt 101  Q
    ||||||||||||||||||| |||||| |||||| ||| || ||||  ||| ||||||| |||||| ||||||||||  || |||| | ||| ||||||||    
T  19450911 atgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaataattgtt 19451010  T
Q  102 agttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaa 167  Q
      ||| |||  ||||||||||||| ||||||   |||||||||||||| || ||||||||||||||    
T  19451011 gttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaa 19451076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 51691510 - 51691343
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||||||||| |||||||||| || |||||||||||  ||| |||||||  | |||  ||||||||| ||  |||||| ||| |||||     
T  51691510 tcatgtgtaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgaattaaatatatagctttttaataaataatta 51691411  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    |||||||||||| || | |||||| |||||||| | |||||||||||||| || ||||| |||||||||    
T  51691410 ttagttttcaataaagacttacta-ttttagttgctttaacatgtgcaatgttgcacattttagacaaa 51691343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 27019429 - 27019258
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||| ||| ||| || |||||| ||| || ||||  ||||||||||| |||||| ||||||||||  || |||| | ||| ||||||    
T  27019429 tcatgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttgaataaataattg 27019330  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||| |||  ||||||||||||| ||||||   |||||||||||||| || |||| |||||||||||||    
T  27019329 ttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacacgttagacaaaccc 27019258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 176
Target Start/End: Complemental strand, 39539604 - 39539457
Alignment:
Q  30 tttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactactttt 128  Q
    |||||| | |||||| |||||||||||||||| |||| ||||||||||||||  |||||| ||| ||| ||||  ||||||||||||| ||||||  |||    
T  39539604 tttaaaatggtaactatgacttgaaacttgtgaatttcatattaaatatgtagctttttaataaataagtgttgtttttcaatgaaaaattactaagttt 39539505  T
Q  129 agtttccttaacatgtgcaatattacacatgttagacaaacccaaaaa 176  Q
    || |  |||| |||||||||| || | ||||||||||||| |||||||    
T  39539504 agatgtcttagcatgtgcaatgttgcgcatgttagacaaatccaaaaa 39539457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 4329763 - 4329635
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||| ||| ||| || |||||||||||||||||||||||||| || ||   |||||||||||||||| || ||||| | | |||| |    
T  4329763 tcatgtgcaaatttgcatatgttaaaaagtttaaagtagtaactttgacttgaaatttatgttttttatattaaatatgt-aacttttaatcaataatcg 4329665  T
Q  100 ttagttttcaatgaaaagttactactttta 129  Q
    || ||||||||| |||| ||||||||||||    
T  4329664 ttggttttcaattaaaaattactactttta 4329635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 9326884 - 9327054
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatt-tatattaaatatgtaaatttttagtaattaattgttagt--- 104  Q
    ||||||||||||| ||||||||||||| |   || |||  |||| |||||||| ||| |||||||||||   || |||||| |||| ||||| || |       
T  9326884 aaatttgcacatgttaagaaatttaaaatgacaagtttatcttggaacttgtgtattctatattaaatagacaactttttaataat-aattgatactatt 9326982  T
Q  105 tttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaaaaa 176  Q
    ||||||||||||||||||||  |||||||| ||||||| ||||||||| || ||||||||||||||||||||    
T  9326983 tttcaatgaaaagttactacaattagtttctttaacatatgcaatattgcatatgttagacaaacccaaaaa 9327054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 70 - 171
Target Start/End: Complemental strand, 49332432 - 49332331
Alignment:
Q  70 ttaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    |||||| | ||| |||||| ||| |||||  || ||||||||||||||||| |||||||| || |||||||||||| |||||| ||||||||||||||||    
T  49332432 ttaaatttataactttttaataaataattaatatttttcaatgaaaagttattacttttaattaccttaacatgtgaaatattgcacatgttagacaaac 49332333  T
Q  170 cc 171  Q
    ||    
T  49332332 cc 49332331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 23545645 - 23545473
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||| || |||||| ||  || ||||  ||| || |||| |||||| ||||||||||  || |||| | ||| ||||||    
T  23545645 tcatgtgcaaatttgcacatgttaataagtttaaaatataaattttgtattggaaattgtacatttaatattaaatataaaacttttgaataaataattg 23545546  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||  |||||||  |||| |||||||| ||||||   |||||||||||||| || |||||||||||||||||||    
T  23545545 ttgtttttcaagaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgttagacaaaccca 23545473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 49650286 - 49650210
Alignment:
Q  94 taattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacc 170  Q
    |||||||| ||||| |||||||||||||| ||||||||| |||||| |||||||||||| |||| ||||||||||||    
T  49650286 taattgtttgtttttaatgaaaagttacttcttttagttaccttaatatgtgcaatattgcacaggttagacaaacc 49650210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 9373606 - 9373772
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatt-tatattaaatatgtaaatttttagtaattaattgttagt--- 104  Q
    ||||||||||||| ||||||||||||| |   || |||  |||| |||||||| ||| |||||||||||   || |||||| |||| ||||| || |       
T  9373606 aaatttgcacatgttaagaaatttaaaatgacaagtttatcttggaacttgtgtattctatattaaatagacaactttttaataat-aattgatactatt 9373704  T
Q  105 tttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||||||||||||||||||||  |||||||| ||||||| ||||||||| || ||||||||||||||||    
T  9373705 tttcaatgaaaagttactacaattagtttctttaacatatgcaatattgcatatgttagacaaaccca 9373772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 9381918 - 9382084
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatt-tatattaaatatgtaaatttttagtaattaattgttagt--- 104  Q
    ||||||||||||| ||||||||||||| |   || |||  |||| |||||||| ||| |||||||||||   || |||||| |||| ||||| || |       
T  9381918 aaatttgcacatgttaagaaatttaaaatgacaagtttatcttggaacttgtgtattctatattaaatagacaactttttaataat-aattgatactatt 9382016  T
Q  105 tttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||||||||||||||||||||  |||||||| ||||||| ||||||||| || ||||||||||||||||    
T  9382017 tttcaatgaaaagttactacaattagtttctttaacatatgcaatattgcatatgttagacaaaccca 9382084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 10658557 - 10658625
Alignment:
Q  105 tttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    ||||||| |||| || |||||||||||| |||||||||||| |||||| ||||||||||||||||||||    
T  10658557 tttcaataaaaacttgctacttttagttaccttaacatgtgtaatattgcacatgttagacaaacccaa 10658625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 10872702 - 10872770
Alignment:
Q  105 tttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    ||||||| |||| || |||||||||||| |||||||||||| |||||| ||||||||||||||||||||    
T  10872702 tttcaataaaaacttgctacttttagttaccttaacatgtgtaatattgcacatgttagacaaacccaa 10872770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 23438322 - 23438193
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattgtt 101  Q
    ||||||||||||||||||| | |||| |||||| |||||||||||  ||||||||||| || |||||| |||||||||    ||||| ||| | ||||||    
T  23438322 atgtgcaaatttgcacatgttgagaattttaaaatagtaactttgttttgaaacttgttcattttata-taaatatgttgccttttaataaattattgtt 23438224  T
Q  102 agttttcaatgaaaagttactacttttagtt 132  Q
      |||||||| |||||||||||| |||||||    
T  23438223 gtttttcaataaaaagttactacatttagtt 23438193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 24685006 - 24684834
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| ||| || ||||  ||| ||||||| ||||| |||||||||||  || |||| | ||| ||||||    
T  24685006 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtacatttaatattaaatataaaacttttgaataaataattg 24684907  T
Q  100 ttagttttc--aatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || ||||||  ||  ||||||||||||| ||||||   |||||||||| ||| || || |||||| ||||||||    
T  24684906 tt-gttttccaaaaaaaaagttactactattagttgttttaacatgtgtaatgttgcaaatgttaaacaaaccc 24684834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 25843459 - 25843291
Alignment:
Q  5 gtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaactt--gtgcattt-atattaaatatgtaaa-tttttagtaattaattgt 100  Q
    ||||||||||| | ||| ||| || |||||||||||||||||| |||  |||||  |||||||| ||||||||||| |||  ||||||  || |  ||||    
T  25843459 gtgcaaatttgtagatgttaaaaagtttaaagtagtaactttgtcttagaacttttgtgcattttatattaaatatataagctttttaacaaatggttgt 25843360  T
Q  101 tagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    |  |||||||| |||||||||||||||||||| | |||||||||   |||||  |||||||||||||||    
T  25843359 tgtttttcaataaaaagttactacttttagttgctttaacatgtattatattgtacatgttagacaaac 25843291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 48910811 - 48910947
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg-catttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||| |||||||||||| ||| |||||| ||||||||||||||||| ||| | || |||||   ||||| |||||||||| |  ||||| | | ||||||    
T  48910811 tcatatgcaaatttgcatatgttaagaagtttaaagtagtaactttaactaggaatttgtgttttttatgttaaatatgt-agcttttaatcaataattg 48910909  T
Q  100 ttagttttcaatgaaaagttactacttttagtttcctt 137  Q
    ||| |||||||| |||| ||||||||||||||| ||||    
T  48910910 ttaattttcaataaaaaattactacttttagttacctt 48910947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 36971439 - 36971363
Alignment:
Q  5 gtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgta 80  Q
    |||||||||| | |||| ||||||||||||| ||||||||||  |||||||||||| || |||||||||||||||||    
T  36971439 gtgcaaatttacgcatgttaagaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaatatgta 36971363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 49228823 - 49228763
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg 61  Q
    |||||||||||||||||| || |||||| |||||| |||||||||||||||| ||||||||    
T  49228823 tcatgtgcaaatttgcacgtgttaagaagtttaaattagtaactttgacttggaacttgtg 49228763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 16069216 - 16069387
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    |||| |||||||||||||||| |||||| ||| || ||| |  ||||  |||||| |||| |||||| ||||||||||  |  |||||| ||| ||||||    
T  16069216 tcatatgcaaatttgcacatgttaagaagttttaaatagaatttttgtattgaaatttgtacatttaatattaaatataaatttttttaataaataattg 16069315  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaacccaa 173  Q
    ||  |||||||| |||| |||||||| ||  |||  ||||| |||||||| || ||||||||||||||| ||||    
T  16069316 ttgtttttcaataaaaaattactactcttgattt--ttaacgtgtgcaatgttgcacatgttagacaaatccaa 16069387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 48910965 - 48911015
Alignment:
Q  122 tacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    |||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  48910965 tacttttagttatcttaacatgtgcaatattgcacatgttagacaaaccca 48911015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 33632212 - 33632379
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||| |||||||||||| ||| || |||||| ||| || ||  | ||||||||||| |||||| ||||||||||  || |||| | ||| ||||||    
T  33632212 tcatgtgcgaatttgcacatgttaaaaagtttaaaatagaaatttata-ttgaaacttgtacatttaatattaaatataaaacttttgaataaataattg 33632310  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    ||  |||||||  ||||||||||||| ||||||   || ||||||  ||| || |||||||||||||||    
T  33632311 ttgtttttcaaaaaaaagttactactattagttgtttttacatgtataatgttgcacatgttagacaaa 33632379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 150
Target Start/End: Original strand, 35645074 - 35645163
Alignment:
Q  64 tttatattaaatatgtaaatttttagtaattaattgttagttttcaat---gaaaagttactacttttagtttccttaacatgtgcaata 150  Q
    |||||||||||||| ||| |||||| ||| ||||||||| ||||||||    ||||||| |||||||||||||| ||||| | |||||||    
T  35645074 tttatattaaatatataactttttaataaataattgttatttttcaataaaaaaaagttgctacttttagtttctttaacgtatgcaata 35645163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42479901 - 42479988
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaattttt 87  Q
    ||||||||||||||||||||| ||||||||||||  |  ||| |||| |||| |||||||||| ||||||| |||||| ||| |||||    
T  42479901 tcatgtgcaaatttgcacatgttaagaaatttaatatgataaatttgtcttggaacttgtgcattttatatcaaatatataacttttt 42479988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 1378178 - 1378088
Alignment:
Q  10 aatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||||||| ||||||||||||| | |||| |||  |||||||||||| ||||| ||||||||||| |||  ||||| ||| ||||||    
T  1378178 aatttgcacatgttaagaaatttaaaatggtaaatttatcttgaaacttgtacatttaatattaaatatataacattttaataaataattg 1378088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 3085427 - 3085349
Alignment:
Q  94 taattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||||||||| |||||||  |||| |||||||| ||| ||   |||||||||||||| || |||||||||||||||||||    
T  3085427 taattgttatttttcaagaaaaaattactactattaattgttttaacatgtgcaatgttgcacatgttagacaaaccca 3085349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 37784877 - 37785003
Alignment:
Q  9 aaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattgttagtttt 107  Q
    ||||||| ||||| |||||| || ||| |||||| |||   ||| || |||||||||| || |||||||||||| |||||| ||| | ||| ||  ||||    
T  37784877 aaatttggacatgttaagaagttcaaaatagtaaatttatattgtaatttgtgcattttatgttaaatatgtaactttttaataaatgattattgttttt 37784976  T
Q  108 caatgaaaagttactacttttagtttc 134  Q
    |||| ||||||| ||||||||||||||    
T  37784977 caataaaaagttgctacttttagtttc 37785003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 169
Target Start/End: Complemental strand, 6875606 - 6875501
Alignment:
Q  64 tttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttag 163  Q
    |||||||||||| | ||| |||| | ||| |||||| || ||| |||| |||  |||||| ||||||||   ||||||||||||||||| || |||||||    
T  6875606 tttatattaaatttataacttttcaataaataattgatattttccaataaaatattactatttttagttgttttaacatgtgcaatattgcaaatgttag 6875507  T
Q  164 acaaac 169  Q
    ||||||    
T  6875506 acaaac 6875501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10658426 - 10658527
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||| |||||||||||| ||| ||||||||| ||||||||||   ||||||||||  || ||| |||||||||| ||| |||||  ||| ||||||    
T  10658426 tcatgtgctaatttgcacatgttaaaaaatttaaaatagtaactttacattgaaacttgaacattttgtattaaatatataactttttgttaaataattg 10658525  T
Q  100 tt 101  Q
    ||    
T  10658526 tt 10658527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10872571 - 10872672
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    |||||||| |||||||||||| ||| ||||||||| ||||||||||   ||||||||||  || ||| |||||||||| ||| |||||  ||| ||||||    
T  10872571 tcatgtgctaatttgcacatgttaaaaaatttaaaatagtaactttacattgaaacttgaacattttgtattaaatatataactttttgttaaataattg 10872670  T
Q  100 tt 101  Q
    ||    
T  10872671 tt 10872672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 13009832 - 13009913
Alignment:
Q  68 tattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaat 149  Q
    |||||||||| ||  |||||||||| ||||| |||||||||||| |||| ||| |||||||||||   ||||||| ||||||    
T  13009832 tattaaatatatagctttttagtaaataattattagttttcaataaaaacttaatacttttagttgttttaacatatgcaat 13009913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40682600 - 40682548
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaa 54  Q
    |||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||    
T  40682600 tcatgtgcaa-tttgcacatgttaagaaatttaaaatagtaactttgtcttgaa 40682548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 18882276 - 18882352
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaata 76  Q
    ||||||||||||||||||||| |||||| |||||| ||| || ||||  ||| ||||||| ||||| ||||||||||    
T  18882276 tcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 18882352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 32459397 - 32459337
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  32459397 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 32459337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 36968338 - 36968286
Alignment:
Q  119 tactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||||||||||||| | |||||||||| |||||| ||||||||||| ||||||    
T  36968338 tactacttttagttactttaacatgtgtaatattgcacatgttagataaaccc 36968286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 40282554 - 40282594
Alignment:
Q  324 aaaggtccatggttggaccttttttgaaagggtgcatatta 364  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  40282554 aaaggtccatggttggacgtttttttaaagggtgcatatta 40282594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 41887681 - 41887741
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttaga 164  Q
    |||||||| ||||||| || |||||||| ||||||||||||||||  || |||||||||||    
T  41887681 ttttcaataaaaagttgcttcttttagtatccttaacatgtgcaaatttgcacatgttaga 41887741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 49250345 - 49250409
Alignment:
Q  2 catgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt 66  Q
    |||||||||||||||| ||| ||||||||||||||||| || |||   |||||||||||| ||||    
T  49250345 catgtgcaaatttgcatatgttaagaaatttaaagtagcaagtttatattgaaacttgtgtattt 49250409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 42480000 - 42480099
Alignment:
Q  69 attaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    ||||||||| ||| |||||| ||| |||||| |  |||||||| ||| ||| ||||| |||||| | |||| |||||||||||| || ||| ||||||||    
T  42480000 attaaatatataactttttaataaataattgatgtttttcaataaaatgttgctactcttagttgctttaagatgtgcaatattgcatatgctagacaaa 42480099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 55814033 - 55813922
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcatt-tatattaaatatgtaaatttttagtaattaattg 99  Q
    |||| |||||||||||||||| ||| || |||||| || ||| ||||  |||||| |||| |||| | |||||||||| ||| |||||| ||| ||||||    
T  55814033 tcatatgcaaatttgcacatgttaaaaagtttaaaataataattttgtattgaaatttgtacattctgtattaaatatataactttttaataaataattg 55813934  T
Q  100 ttagttttcaat 111  Q
    ||  ||||||||    
T  55813933 ttgattttcaat 55813922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 9971710 - 9971744
Alignment:
Q  137 taacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||||||||||||||| ||||||||||||||||||    
T  9971710 taacatgtgcaatattgcacatgttagacaaaccc 9971744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 39876844 - 39876806
Alignment:
Q  134 ccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  39876844 ccttaacatatgcaatattgcacatgttagacaaaccca 39876806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 41488734 - 41488792
Alignment:
Q  8 caaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt 66  Q
    |||||||||||||| ||||||||||||| | |||| |||| ||| |||||| |||||||    
T  41488734 caaatttgcacatgttaagaaatttaaaattgtaaatttgtcttaaaacttatgcattt 41488792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 45742424 - 45742366
Alignment:
Q  113 aaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    |||||||| |||| ||||||   |||||||||||||| || ||||||||||||||||||    
T  45742424 aaaagttaatactattagttgttttaacatgtgcaatgttgcacatgttagacaaaccc 45742366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 141
Target Start/End: Complemental strand, 35911180 - 35911143
Alignment:
Q  104 ttttcaatgaaaagttactacttttagtttccttaaca 141  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  35911180 ttttcaatgcaaaattactacttttagtttccttaaca 35911143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 457
Target Start/End: Complemental strand, 961326 - 961274
Alignment:
Q  405 gagagttgttttaaaagttgtctataaatgattgtacaaatattatttttctt 457  Q
    ||||||||||| ||||||| || | |||| |||||||||||||||||| ||||    
T  961326 gagagttgtttcaaaagttatcaaaaaattattgtacaaatattatttctctt 961274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 1377504 - 1377452
Alignment:
Q  119 tactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||||||||||| || | |||||||||| |||||| ||| ||||||||||||||    
T  1377504 tactacttttaattactttaacatgtgtaatattgcacgtgttagacaaaccc 1377452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 3728305 - 3728249
Alignment:
Q  113 aaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaac 169  Q
    ||||||||||||||||||||    |||||||| |||||||  |||||||||||||||    
T  3728305 aaaagttactacttttagttgttataacatgttcaatattgtacatgttagacaaac 3728249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 51070407 - 51070520
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| |||||||||| |  ||||||||||||| | |||| ||||  ||| |||||||| |||| ||||||||||| ||| |||||| ||| | ||||    
T  51070407 tcatgtgaaaatttgcacgt--taagaaatttaaaatggtaagtttgttttgtaacttgtgtattttatattaaatatataactttttaataaatgattg 51070504  T
Q  100 ttagttttcaatgaaa 115  Q
     |  ||||||||||||    
T  51070505 gtgtttttcaatgaaa 51070520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 37123 - 37295
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||  ||||||||||||| ||||||||||||| ||||||||||||||  |||||| ||| ||| |     
T  37123 tcatgtgcaaatttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgcatttcatattaaatatgtagctttttaataaataagtt 37222  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||  |||||||| |||| ||||||||||||| |  ||||||||||||||| || |||||||||||||||||||    
T  37223 ttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaaccca 37295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 13254 - 13084
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||| | ||| || |||||  ||| ||||||||||||||  |||| |  ||  |||||    
T  13254 tcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaatttggaatttgtgttttttatattaaatatgtagcttttaatcaac-aattg 13156  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    || |||||||||||||| ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  13155 ttggttttcaatgaaaaattactacttttagttaccttaacatatgcaatattgcacatgttagacaaaccc 13084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 5860 - 5692
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgt-gcatttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||| |||| ||| ||||    |||||||||||||||| | |||||| | | ||||||    
T  5860 tcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaatatgt-agtttttaatcaataattg 5762  T
Q  100 ttagttttcaat-gaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    || |||||||||  |||| |||||| |||||||| ||||||||||||||||||| |||||||||||||||    
T  5761 ttggttttcaataaaaaaattactatttttagttaccttaacatgtgcaatattgcacatgttagacaaa 5692  T

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Target: scaffold0618 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 8423 - 8550
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||||| ||| |||||||||||||||||||||||||| ||  |||||||||| |||||||||||| ||||  |||||| ||| ||||||    
T  8423 tcatgtgtaaatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataaataattg 8522  T
Q  100 ttagttttcaatgaaaagttactactttt 128  Q
    || ||||||||| |||| ||| |||||||    
T  8523 tt-gttttcaataaaaaattaatactttt 8550  T

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Target: scaffold0036 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 94027 - 94195
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||| ||| |||||| ||| || || |||||||   ||| ||||| | |||||  |||||||||| ||  |||||| ||| |||||     
T  94027 tcatgtgcaaatttgcatatgttaagaagttttaaatactaactttacattggaacttatacattttgtattaaatatatagttttttaataaataatta 94126  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    |||||||||||| |||| |||||||||||||||   |||||||||||||| || || ||||||||||||    
T  94127 ttagttttcaataaaaacttactacttttagttgatttaacatgtgcaatgttgcatatgttagacaaa 94195  T

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Target: scaffold0155 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 3422 - 3572
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||||||||  |||||| ||||||||||| ||||| | ||| ||||| ||  ||| ||||||||||||||| |||| |  ||| |||||    
T  3422 tcatgtgtaaatttgcacatattaagaagtttaaagtagttactttaaattggaacttatgttttttatattaaatatgtaacttttaatcaat-aattg 3520  T
Q  100 ttagttttcaatgaaaa-gttactacttttagtttccttaacatgtgcaata 150  Q
    || ||||| |||||||| |||||||||||||||| | |||||||||||||||    
T  3521 ttggtttttaatgaaaaagttactacttttagttacattaacatgtgcaata 3572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 16544 - 16714
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||||||||||||||||| |||||| ||||||||| ||  ||||| ||| |||||||| | ||| |||| ||||| |||||||||| ||| ||||||    
T  16544 tcatgtgcaaatttgcacatgttaagaagtttaaagtaatatgtttgatttggaacttgtgtattttctatt-aatatataaatttttaataaataattg 16642  T
Q  100 ttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccc 171  Q
    ||  ||| |||| || |||| |  ||||||||| | ||||||| |||||| || || |||||||||||||||    
T  16643 ttgttttccaataaatagttgccgcttttagttactttaacatatgcaattttgcaaatgttagacaaaccc 16714  T

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Target: scaffold0018 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 182211 - 182085
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaatttttagtaattaattg 99  Q
    ||||||| ||||||| ||||| |||||| |||||||||||| | |||| ||||||||||||  ||| ||||||||||||||| |||| | ||| ||||||    
T  182211 tcatgtgtaaatttgtacatgttaagaagtttaaagtagta-cgttgatttgaaacttgtgttttttatattaaatatgtaacttttaa-taaataattg 182114  T
Q  100 ttagttttcaatgaaaagttactactttt 128  Q
    || ||||||||| |||| |||||||||||    
T  182113 tttgttttcaataaaaaattactactttt 182085  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 43567 - 43460
Alignment:
Q  64 tttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaatatt--acacatgtt 161  Q
    |||||||||||||| ||| |||| | |||| |||||||  ||||||||||||| |||||||||||| || |||||||| ||||||||||   ||||||||    
T  43567 tttatattaaatatataacttttaattaat-aattgttgattttcaatgaaaaattactactttta-ttaccttaacacgtgcaatattgctcacatgtt 43470  T
Q  162 agacaaaccc 171  Q
    ||| ||||||    
T  43469 agagaaaccc 43460  T

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Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 191326 - 191454
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaatttttagtaattaattgtt 101  Q
    ||||||||||||||||||| ||||||||||||| |   || |||| |||| || ||||| | |||||||||||||| | |||||||| ||| |||| |      
T  191326 atgtgcaaatttgcacatgttaagaaatttaaaatgacaaatttgtcttggaa-ttgtgtattttatattaaatatat-aatttttaataaataatcgga 191423  T
Q  102 agttttcaatgaaaagttactacttttagtt 132  Q
     |||||||||||||| |||| ||||||||||    
T  191424 tgttttcaatgaaaaattaccacttttagtt 191454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 193376 - 193419
Alignment:
Q  135 cttaacatgtgcaatattacacatgttagacaaacccaaaaatt 178  Q
    |||||||||||||||||| |||||||||||||||| || |||||    
T  193376 cttaacatgtgcaatattgcacatgttagacaaactcataaatt 193419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 153
Target Start/End: Original strand, 17802 - 17951
Alignment:
Q  6 tgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgcattta-tattaaatatgtaaatttttagtaattaattgttagt 104  Q
    |||||||||||||||| ||  || || ||| ||||||||||   ||| ||||||| |||||  ||||||| || |||||||||| ||| ||||||||| |    
T  17802 tgcaaatttgcacatgttattaagttaaaaatagtaactttatattggaacttgtacattttgtattaaagatataaatttttaataaataattgttatt 17901  T
Q  105 tttcaatgaaaagttactacttttagttt-ccttaacatgtgcaatatta 153  Q
    ||||||| |||  ||  |||||||||||| | ||||||||||||| ||||    
T  17902 tttcaataaaagcttgttacttttagtttgctttaacatgtgcaacatta 17951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 18069 - 18153
Alignment:
Q  64 tttatattaaatatgtaaatttttagtaattaattgttagttttcaatgaaaagttactacttttagtttccttaacatgtgcaa 148  Q
    |||||||||||||| ||| ||| || ||| ||||||||  |||| ||| || |||||||||||||| || | |||||| ||||||    
T  18069 tttatattaaatatataactttctaataaataattgttgttttttaattaagagttactacttttaattcctttaacacgtgcaa 18153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 13574 - 13632
Alignment:
Q  3 atgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg 61  Q
    ||||||||||||||||||| |||||| |||||| |||||| ||||  ||||||||||||    
T  13574 atgtgcaaatttgcacatgttaagaagtttaaattagtaagtttgcattgaaacttgtg 13632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 13780 - 13839
Alignment:
Q  113 aaaagttactacttttagtttccttaacatgtgcaatattacacatgttagacaaaccca 172  Q
    ||||||||||||| ||||||   |||||||||||||| || ||||||||||| |||||||    
T  13780 aaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagaaaaaccca 13839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 492 - 443
Alignment:
Q  119 tactacttttagtttccttaacatgtgcaatattacacatgttagacaaa 168  Q
    ||||||||||||||   ||||||||||||||||| ||||||||| |||||    
T  492 tactacttttagttgatttaacatgtgcaatattgcacatgttaaacaaa 443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1452 - 1529
Alignment:
Q  1 tcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatat 77  Q
    ||||||||||||||||||||| |||||| ||||||  ||||| |||  ||| ||| |||| || ||||||||||||||    
T  1452 tcatgtgcaaatttgcacatgttaagaagtttaaaagagtaattttatcttaaaatttgttcattttatattaaatat 1529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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