View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11455_low_21 (Length: 304)

Name: NF11455_low_21
Description: NF11455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11455_low_21
NF11455_low_21
[»] chr8 (32 HSPs)
chr8 (12-287)||(35745263-35745537)
chr8 (12-287)||(10684203-10684478)
chr8 (12-276)||(39784763-39785026)
chr8 (23-276)||(25328230-25328480)
chr8 (25-276)||(7289879-7290129)
chr8 (23-276)||(6311180-6311431)
chr8 (23-157)||(18853129-18853264)
chr8 (23-157)||(33037769-33037902)
chr8 (23-157)||(18870523-18870658)
chr8 (23-157)||(36979378-36979512)
chr8 (76-157)||(10689157-10689239)
chr8 (23-157)||(30655647-30655781)
chr8 (61-157)||(4760075-4760171)
chr8 (75-157)||(26287902-26287985)
chr8 (75-157)||(26301159-26301242)
chr8 (75-157)||(26313153-26313236)
chr8 (61-157)||(1261954-1262050)
chr8 (67-158)||(26403235-26403328)
chr8 (61-180)||(23799576-23799695)
chr8 (61-157)||(4456028-4456125)
chr8 (61-180)||(19175754-19175874)
chr8 (61-158)||(5702482-5702581)
chr8 (61-154)||(6127224-6127319)
chr8 (61-154)||(7412344-7412438)
chr8 (61-157)||(31071229-31071326)
chr8 (89-180)||(4696624-4696714)
chr8 (94-155)||(9765852-9765914)
chr8 (61-158)||(19752394-19752492)
chr8 (94-153)||(43079877-43079937)
chr8 (94-153)||(43082248-43082308)
chr8 (94-127)||(18810982-18811015)
chr8 (94-153)||(44721118-44721178)
[»] chr6 (36 HSPs)
chr6 (12-287)||(6005289-6005563)
chr6 (12-287)||(16838616-16838890)
chr6 (12-287)||(33330384-33330660)
chr6 (12-287)||(33335881-33336157)
chr6 (12-283)||(28155510-28155780)
chr6 (12-274)||(6438385-6438645)
chr6 (112-287)||(5343352-5343527)
chr6 (23-276)||(11856854-11857108)
chr6 (23-275)||(28184388-28184638)
chr6 (23-276)||(14737528-14737779)
chr6 (23-276)||(22010648-22010899)
chr6 (23-276)||(14742388-14742638)
chr6 (61-156)||(5674770-5674865)
chr6 (61-180)||(5572240-5572359)
chr6 (61-157)||(5757478-5757575)
chr6 (61-180)||(10077164-10077283)
chr6 (61-180)||(31086472-31086591)
chr6 (61-158)||(31979512-31979611)
chr6 (61-157)||(4629954-4630052)
chr6 (61-157)||(21356036-21356133)
chr6 (61-180)||(22963679-22963797)
chr6 (61-180)||(23824596-23824714)
chr6 (61-145)||(21801343-21801429)
chr6 (61-136)||(18232867-18232943)
chr6 (75-126)||(22709050-22709102)
chr6 (94-158)||(31936586-31936651)
chr6 (75-180)||(5017482-5017587)
chr6 (94-153)||(12195515-12195575)
chr6 (94-153)||(4816231-4816291)
chr6 (94-153)||(5273216-5273276)
chr6 (94-153)||(19704567-19704627)
chr6 (94-153)||(20915356-20915416)
chr6 (94-153)||(26932562-26932622)
chr6 (94-153)||(29754709-29754769)
chr6 (209-276)||(30125940-30126008)
chr6 (94-153)||(33309110-33309170)
[»] chr5 (45 HSPs)
chr5 (12-287)||(2785247-2785521)
chr5 (12-287)||(33791188-33791462)
chr5 (13-287)||(33768051-33768324)
chr5 (12-287)||(31396930-31397206)
chr5 (12-287)||(31401787-31402063)
chr5 (12-287)||(37556562-37556837)
chr5 (12-287)||(37561384-37561659)
chr5 (12-276)||(28807514-28807777)
chr5 (23-276)||(1457113-1457364)
chr5 (23-276)||(43592161-43592413)
chr5 (23-283)||(27449689-27449948)
chr5 (23-283)||(27444845-27445104)
chr5 (23-268)||(43598614-43598858)
chr5 (23-268)||(43604106-43604350)
chr5 (23-268)||(43609598-43609842)
chr5 (23-276)||(15044569-15044819)
chr5 (23-157)||(30631407-30631541)
chr5 (23-232)||(31180141-31180348)
chr5 (61-157)||(38192174-38192270)
chr5 (61-157)||(38219399-38219495)
chr5 (61-157)||(10281751-10281849)
chr5 (61-157)||(35387663-35387759)
chr5 (61-157)||(9353332-9353429)
chr5 (61-157)||(36932350-36932447)
chr5 (61-156)||(11916971-11917068)
chr5 (61-157)||(24135849-24135945)
chr5 (64-180)||(17003962-17004078)
chr5 (61-157)||(15464532-15464629)
chr5 (61-158)||(3880298-3880397)
chr5 (61-157)||(19588746-19588844)
chr5 (61-157)||(14520230-14520327)
chr5 (61-154)||(12084175-12084269)
chr5 (61-158)||(28832258-28832356)
chr5 (61-180)||(42127410-42127528)
chr5 (94-153)||(4410241-4410301)
chr5 (94-153)||(15552464-15552524)
chr5 (94-153)||(31179371-31179431)
chr5 (94-153)||(31542953-31543013)
chr5 (94-153)||(31545299-31545359)
chr5 (100-153)||(27910675-27910729)
chr5 (50-180)||(24553496-24553624)
chr5 (94-158)||(31300629-31300694)
chr5 (94-153)||(3373137-3373197)
chr5 (94-153)||(10749919-10749979)
chr5 (94-153)||(15354575-15354635)
[»] chr2 (43 HSPs)
chr2 (12-287)||(19344292-19344567)
chr2 (12-287)||(19349150-19349425)
chr2 (23-287)||(32246656-32246921)
chr2 (23-276)||(44312575-44312826)
chr2 (23-276)||(39811940-39812190)
chr2 (61-267)||(14291380-14291585)
chr2 (23-157)||(11098889-11099023)
chr2 (61-157)||(3491751-3491847)
chr2 (61-157)||(9296401-9296497)
chr2 (61-180)||(21629923-21630041)
chr2 (61-157)||(25398496-25398592)
chr2 (61-154)||(13569331-13569426)
chr2 (70-158)||(8040059-8040149)
chr2 (61-157)||(25403634-25403730)
chr2 (61-158)||(10445443-10445542)
chr2 (61-158)||(17865202-17865301)
chr2 (61-158)||(34682333-34682432)
chr2 (61-180)||(14699007-14699125)
chr2 (61-180)||(20522199-20522318)
chr2 (61-180)||(34388837-34388956)
chr2 (75-157)||(40738844-40738926)
chr2 (61-180)||(8390149-8390268)
chr2 (61-157)||(28259177-28259274)
chr2 (61-156)||(10707251-10707348)
chr2 (61-180)||(33528620-33528739)
chr2 (64-157)||(31056044-31056139)
chr2 (61-158)||(39482930-39483029)
chr2 (61-180)||(16940208-16940327)
chr2 (61-180)||(17010873-17010992)
chr2 (61-180)||(33118115-33118234)
chr2 (61-127)||(25407653-25407719)
chr2 (61-157)||(23078470-23078567)
chr2 (61-157)||(42039669-42039766)
chr2 (94-153)||(35215586-35215646)
chr2 (94-153)||(35217963-35218023)
chr2 (61-154)||(2838029-2838124)
chr2 (61-154)||(2869692-2869787)
chr2 (61-157)||(36757762-36757859)
chr2 (94-154)||(1345574-1345635)
chr2 (97-153)||(45332181-45332238)
chr2 (94-153)||(23452237-23452297)
chr2 (94-153)||(36558864-36558924)
chr2 (94-153)||(36561141-36561201)
[»] chr3 (54 HSPs)
chr3 (12-287)||(24967979-24968253)
chr3 (12-287)||(2677026-2677301)
chr3 (12-287)||(2672870-2673145)
chr3 (12-287)||(8512087-8512363)
chr3 (12-287)||(8516967-8517243)
chr3 (12-287)||(32475356-32475629)
chr3 (12-287)||(32480214-32480487)
chr3 (109-287)||(10207805-10207983)
chr3 (12-276)||(18656314-18656579)
chr3 (23-276)||(22173146-22173397)
chr3 (23-168)||(28503826-28503970)
chr3 (23-259)||(7167144-7167379)
chr3 (61-276)||(2671586-2671800)
chr3 (61-157)||(8477363-8477459)
chr3 (61-157)||(8739063-8739159)
chr3 (61-157)||(9091301-9091397)
chr3 (61-157)||(40372795-40372891)
chr3 (61-158)||(18552872-18552971)
chr3 (61-180)||(1736294-1736413)
chr3 (61-180)||(36029072-36029191)
chr3 (61-157)||(26928591-26928687)
chr3 (61-157)||(8370476-8370573)
chr3 (61-180)||(21711202-21711320)
chr3 (61-157)||(27974942-27975039)
chr3 (61-157)||(30709779-30709877)
chr3 (61-157)||(1305949-1306045)
chr3 (61-180)||(16264327-16264447)
chr3 (61-178)||(48438195-48438312)
chr3 (61-158)||(3715991-3716090)
chr3 (61-158)||(40592771-40592870)
chr3 (75-157)||(27986449-27986533)
chr3 (61-158)||(26298987-26299086)
chr3 (61-180)||(6794703-6794821)
chr3 (61-157)||(25795781-25795879)
chr3 (23-114)||(28501659-28501750)
chr3 (61-157)||(32143321-32143418)
chr3 (75-157)||(33386669-33386753)
chr3 (61-158)||(47923895-47923994)
chr3 (61-157)||(27452958-27453055)
chr3 (61-158)||(40844651-40844749)
chr3 (61-180)||(24695153-24695272)
chr3 (61-180)||(37466270-37466388)
chr3 (94-158)||(1417513-1417578)
chr3 (91-127)||(4386947-4386983)
chr3 (94-153)||(38210569-38210629)
chr3 (75-157)||(39039995-39040079)
chr3 (94-153)||(50494198-50494258)
chr3 (90-153)||(53894055-53894119)
chr3 (61-158)||(3328346-3328444)
chr3 (202-259)||(28503995-28504052)
chr3 (94-153)||(458483-458543)
chr3 (94-153)||(6063444-6063504)
chr3 (94-153)||(10621528-10621588)
chr3 (110-157)||(39153357-39153405)
[»] scaffold0197 (2 HSPs)
scaffold0197 (12-287)||(19104-19378)
scaffold0197 (12-287)||(14248-14523)
[»] scaffold0028 (1 HSPs)
scaffold0028 (12-287)||(148895-149169)
[»] scaffold0259 (1 HSPs)
scaffold0259 (12-283)||(2190-2460)
[»] chr7 (47 HSPs)
chr7 (12-287)||(24261262-24261537)
chr7 (12-287)||(24266141-24266416)
chr7 (12-287)||(16879944-16880218)
chr7 (12-287)||(16884800-16885074)
chr7 (12-276)||(19992195-19992458)
chr7 (12-287)||(21812178-21812452)
chr7 (23-276)||(24024278-24024530)
chr7 (23-276)||(12406214-12406465)
chr7 (23-276)||(12396794-12397045)
chr7 (23-276)||(31109535-31109785)
chr7 (23-276)||(20357509-20357761)
chr7 (72-276)||(4866612-4866816)
chr7 (61-157)||(2057966-2058062)
chr7 (61-157)||(1533444-1533540)
chr7 (61-157)||(18408764-18408860)
chr7 (61-157)||(21639809-21639905)
chr7 (61-158)||(29159802-29159901)
chr7 (61-180)||(46516309-46516428)
chr7 (61-157)||(18413641-18413736)
chr7 (61-157)||(21646007-21646103)
chr7 (61-158)||(49091660-49091759)
chr7 (61-180)||(2647695-2647814)
chr7 (61-156)||(21983285-21983383)
chr7 (61-180)||(33332449-33332568)
chr7 (61-158)||(55947-56045)
chr7 (61-157)||(44848684-44848781)
chr7 (94-180)||(20284068-20284153)
chr7 (61-158)||(9190008-9190106)
chr7 (61-183)||(2580366-2580487)
chr7 (61-178)||(4796666-4796783)
chr7 (61-158)||(35960815-35960914)
chr7 (94-158)||(9185198-9185263)
chr7 (94-154)||(28617258-28617319)
chr7 (94-153)||(31155911-31155971)
chr7 (61-156)||(21988909-21989005)
chr7 (61-157)||(2479337-2479433)
chr7 (89-157)||(47263678-47263745)
chr7 (94-153)||(1049296-1049356)
chr7 (94-153)||(2935497-2935557)
chr7 (94-153)||(3035953-3036013)
chr7 (94-153)||(7351652-7351712)
chr7 (110-157)||(8153466-8153514)
chr7 (94-153)||(9027194-9027254)
chr7 (94-153)||(22108295-22108355)
chr7 (94-153)||(22137306-22137366)
chr7 (94-153)||(40550055-40550115)
chr7 (94-153)||(40552333-40552393)
[»] chr1 (35 HSPs)
chr1 (12-287)||(43988401-43988679)
chr1 (12-276)||(39445382-39445644)
chr1 (12-276)||(25445029-25445292)
chr1 (12-276)||(44023814-44024075)
chr1 (12-276)||(1054952-1055214)
chr1 (23-168)||(41398227-41398369)
chr1 (23-157)||(41390582-41390714)
chr1 (23-259)||(24787326-24787559)
chr1 (61-157)||(24202769-24202865)
chr1 (61-158)||(47703935-47704034)
chr1 (61-157)||(19072928-19073026)
chr1 (61-157)||(19120818-19120916)
chr1 (61-158)||(16124515-16124614)
chr1 (61-158)||(27104371-27104470)
chr1 (61-180)||(9476240-9476359)
chr1 (61-180)||(13598377-13598496)
chr1 (61-157)||(26644897-26644994)
chr1 (61-180)||(29651790-29651909)
chr1 (61-157)||(19358843-19358939)
chr1 (61-157)||(19361432-19361528)
chr1 (61-157)||(19380072-19380168)
chr1 (61-157)||(3281708-3281805)
chr1 (72-180)||(775651-775759)
chr1 (64-157)||(37069770-37069864)
chr1 (61-180)||(47098824-47098942)
chr1 (61-127)||(21536569-21536635)
chr1 (61-157)||(13604623-13604720)
chr1 (12-58)||(25439836-25439882)
chr1 (94-153)||(9459419-9459479)
chr1 (94-153)||(9463246-9463306)
chr1 (94-153)||(16226386-16226446)
chr1 (94-180)||(47102874-47102959)
chr1 (61-158)||(32889438-32889536)
chr1 (94-153)||(23786058-23786118)
chr1 (94-153)||(51752582-51752642)
[»] scaffold0009 (1 HSPs)
scaffold0009 (82-287)||(181973-182178)
[»] scaffold0464 (1 HSPs)
scaffold0464 (12-276)||(245-507)
[»] chr4 (39 HSPs)
chr4 (12-276)||(18855609-18855871)
chr4 (12-276)||(5732544-5732809)
chr4 (12-283)||(3813899-3814168)
chr4 (12-276)||(9224346-9224609)
chr4 (12-276)||(9229133-9229396)
chr4 (23-287)||(45357248-45357510)
chr4 (23-276)||(51520339-51520591)
chr4 (25-268)||(56146664-56146906)
chr4 (23-287)||(45347768-45348031)
chr4 (23-157)||(24741941-24742075)
chr4 (61-157)||(29760642-29760738)
chr4 (61-180)||(10047358-10047477)
chr4 (61-180)||(39245973-39246092)
chr4 (61-180)||(38152438-38152557)
chr4 (61-158)||(16623292-16623391)
chr4 (75-157)||(28468542-28468625)
chr4 (61-180)||(36315229-36315347)
chr4 (61-180)||(36329438-36329556)
chr4 (61-157)||(3796518-3796616)
chr4 (61-180)||(5147656-5147775)
chr4 (61-157)||(5396671-5396768)
chr4 (61-156)||(5143260-5143357)
chr4 (67-158)||(24333808-24333901)
chr4 (75-180)||(5269204-5269309)
chr4 (61-158)||(16630679-16630778)
chr4 (61-157)||(31985634-31985730)
chr4 (61-180)||(3777528-3777646)
chr4 (64-152)||(6743417-6743507)
chr4 (94-153)||(16931789-16931849)
chr4 (94-153)||(16934143-16934203)
chr4 (94-153)||(22780373-22780433)
chr4 (94-153)||(44599838-44599898)
chr4 (61-180)||(54867163-54867281)
chr4 (75-158)||(25862035-25862120)
chr4 (61-120)||(5112275-5112335)
chr4 (94-153)||(6765117-6765177)
chr4 (94-153)||(7941596-7941656)
chr4 (94-153)||(18709164-18709224)
chr4 (94-153)||(22782738-22782798)
[»] scaffold0355 (3 HSPs)
scaffold0355 (12-283)||(9583-9849)
scaffold0355 (12-70)||(3788-3845)
scaffold0355 (197-283)||(13-96)
[»] scaffold0135 (1 HSPs)
scaffold0135 (12-276)||(35001-35264)
[»] scaffold0188 (2 HSPs)
scaffold0188 (61-157)||(17952-18048)
scaffold0188 (61-157)||(24045-24141)
[»] scaffold0140 (3 HSPs)
scaffold0140 (61-157)||(8419-8516)
scaffold0140 (94-153)||(22343-22403)
scaffold0140 (94-153)||(24618-24678)
[»] scaffold0036 (1 HSPs)
scaffold0036 (61-180)||(85662-85780)
[»] scaffold0006 (3 HSPs)
scaffold0006 (61-180)||(5662-5781)
scaffold0006 (61-180)||(2471-2590)
scaffold0006 (61-157)||(133280-133377)
[»] scaffold0148 (1 HSPs)
scaffold0148 (61-158)||(10728-10827)
[»] scaffold0087 (2 HSPs)
scaffold0087 (61-157)||(43961-44058)
scaffold0087 (61-157)||(36832-36929)
[»] scaffold0098 (1 HSPs)
scaffold0098 (89-157)||(45253-45322)
[»] scaffold0176 (1 HSPs)
scaffold0176 (61-154)||(17266-17361)
[»] scaffold0267 (1 HSPs)
scaffold0267 (94-153)||(269-329)
[»] scaffold0154 (1 HSPs)
scaffold0154 (94-127)||(11500-11533)
[»] scaffold0025 (1 HSPs)
scaffold0025 (94-153)||(69292-69352)


Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 35745537 - 35745263
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35745537 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 35745438  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttgtatgcttgttagctc 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  35745437 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttc-cttttatcgtttatcttgtatgcttgttagctc 35745339  T
Q  212 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35745338 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 35745263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 10684203 - 10684478
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||||||||||||||  || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10684203 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 10684302  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatgcttgttagct 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| | |||||||||||||||||||||||||||||||    
T  10684303 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttt-tcttttatcgtttatcttgtatgcttgttagct 10684401  T
Q  211 cttagtgtggttttgctatacattaggcttaggctgttttgttgttg-ttagcttggaggccatttgcactcatagat 287  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10684402 cttagtgtggatttgct-tacattaggcttaggctgttttgttgttgattagcttggaggccatttgcactcatagat 10684478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 12 - 276
Target Start/End: Original strand, 39784763 - 39785026
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  39784763 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 39784860  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatg---cttgtta 207  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |  ||||| || ||||||||| ||    |||  |    
T  39784861 tctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttcc--ttttaccgcttatcttgtttgtgctttggaa 39784958  T
Q  208 gctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttg 276  Q
     ||||| |||||||||||||||||| || ||||| ||||||||||||||| || |||||||| |||||||    
T  39784959 tctctt-gtgtggttttgctatacacta-gcttagggctgttttgttgttattggcttggagaccatttg 39785026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 23 - 276
Target Start/End: Original strand, 25328230 - 25328480
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 122  Q
    ||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  25328230 tctagggtttgttcatgtgtaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 25328327  T
Q  123 ttaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatct--tgtatg-cttgttagctcttagtgt 218  Q
    |||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||   |||| |||||||||  | ||||  ||| || ||||| ||||    
T  25328328 ttaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttttc--ctttaccgtttatctcgtttatgttttggtatctctt-gtgt 25328423  T
Q  219 ggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttg 276  Q
    |||||||||||||| |||  ||| || ||||||||||||||| |||||||| |||||||    
T  25328424 ggttttgctatacactag--ttagggttgttttgttgttgttggcttggagaccatttg 25328480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 25 - 276
Target Start/End: Original strand, 7289879 - 7290129
Alignment:
Q  25 tagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 123  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  7289879 tagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccagat 7289976  T
Q  124 taggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtat---gcttgttagctcttagtgtg 219  Q
    ||||||| |||||||||||||||||||||||||| ||||||| |||||||||     |||||||  ||||||||| |   | |||||| ||||| |||||    
T  7289977 taggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---ccttttatcacttatcttgtttatggtttgttatctctttgtgtg 7290072  T
Q  220 gttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||||||||||| ||| ||  ||||| |||||||||||| | |||||| |||||||    
T  7290073 gttttgctatacactagtctagggctgctttgttgttgtttgtttggagaccatttg 7290129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 276
Target Start/End: Complemental strand, 6311431 - 6311180
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga--ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccca 120  Q
    |||||||||||| | |||||||||||||||  ||||||  |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  6311431 tctagggtttgt-cttgtgtaaagcttgaag-gctagagtttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctccccca 6311335  T
Q  121 gattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagt 216  Q
    |||||||||| |||||||||||||||||||||||||| ||||||| ||||||| || |||| ||   | ||||||||  ||||| |||||| ||||||||    
T  6311334 gattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc-ttcctttctt---gcttatcttgtttatgctttgttatctcttagt 6311240  T
Q  217 gtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    |||||||||||||||| ||| ||  ||||| |||||||||||| |||||||  |||||||    
T  6311239 gtggttttgctatacactagtctagggctgctttgttgttgtttgcttggaaaccatttg 6311180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 18853129 - 18853264
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagcta--gattcttgtaactcttttgtaacacattcac-atattggattggagagctgctctctccccc 119  Q
    |||||||||||||| ||||||| |||||||  ||||  | |||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  18853129 tctagggtttgttcttgtgtaa-gcttgaat-gctattgtttcttgtaacccttttgtaacactttcattatattggattggagagctgctctctccccc 18853226  T
Q  120 agattaggccacattggctgaactgggtcaacaatctt 157  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  18853227 agattaggccatattggctgaactgggtcaacaatctt 18853264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 33037769 - 33037902
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagcta--gattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccca 120  Q
    |||||||||||||| ||||||| |||||||  ||||  | |||||||||| |||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  33037769 tctagggtttgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt-gtaacactttctcatattggattggagagctgctctctccccca 33037865  T
Q  121 gattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| ||||||||||||||||||||||||||    
T  33037866 gattaggccatattggctgaactgggtcaacaatctt 33037902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 18870523 - 18870658
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagcta--gattcttgtaactcttttgtaacacattcac-atattggattggagagctgctctctccccc 119  Q
    |||||||||||||| ||||||| |||||||  ||||  | |||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  18870523 tctagggtttgttcttgtgtaa-gcttgaat-gctattgtttcttgtaacccttttgtaacactttcattatattggattggagagctgctctctccccc 18870620  T
Q  120 agattaggccacattggctgaactgggtcaacaatctt 157  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  18870621 agattaggccatattggatgaactgggtcaacaatctt 18870658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 36979512 - 36979378
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagcta--gattcttgtaactcttttgtaacacattca-catattggattggagagctgctctctccccc 119  Q
    |||||||||||||| ||||||| |||||||  ||||  | |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||    
T  36979512 tctagggtttgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctccccc 36979416  T
Q  120 agattaggccacattggctgaactgggtcaacaatctt 157  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  36979415 agattaggccatattggctgaactgggtcaacaatctt 36979378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 10689157 - 10689239
Alignment:
Q  76 tgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10689157 tgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 10689239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 30655781 - 30655647
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagcta--gattcttgtaactcttttgtaacacattca-catattggattggagagctgctctctccccc 119  Q
    |||||||||||||| ||||||| |||||||  ||||  | |||||||||| |||| ||||||| |||| |||||| ||||||||||||||||||||||||    
T  30655781 tctagggtttgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt-gtaacactttcatcatattagattggagagctgctctctccccc 30655685  T
Q  120 agattaggccacattggctgaactgggtcaacaatctt 157  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  30655684 agattaggccatattggctgaactgggtcaacaatctt 30655647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 4760075 - 4760171
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  4760075 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaatctt 4760171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 26287985 - 26287902
Alignment:
Q  75 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26287985 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 26287902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 26301242 - 26301159
Alignment:
Q  75 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26301242 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 26301159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 26313236 - 26313153
Alignment:
Q  75 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26313236 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 26313153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 1261954 - 1262050
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  1261954 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggttgaactgggtcaacaatctt 1262050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 26403235 - 26403328
Alignment:
Q  67 taactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  26403235 taactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 26403328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 23799576 - 23799695
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||| ||| |||||| || ||||| | ||||||||||||||||||||    
T  23799576 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcctccaaattaggtcatattggaccgaactgggtcaacaatcttg 23799675  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  23799676 gt--gtgtttgttcctttcttt 23799695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 4456125 - 4456028
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||| | |||| |||||| |||||||    
T  4456125 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggaccgaaccgggtcagcaatctt 4456028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 19175754 - 19175874
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||| ||||||||||||||||||||| || ||||| | ||||| |||||||||||||     
T  19175754 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggaccgaactaggtcaacaatcttt 19175852  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  19175853 ttgtgtgtttgttcctttcttt 19175874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 5702482 - 5702581
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||| | |||||||||||||| |||||| || ||||| | ||||||||||||||||||||    
T  5702482 ttcttgtaactcttttgtaacactttcatcataggggattggagggatgctctctcccccatattaggtcatattggaccgaactgggtcaacaatcttg 5702581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 6127319 - 6127224
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 154  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| ||||| |||||| || ||||| | |||||| |||||||||    
T  6127319 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctcttccccaaattaggtcatattggaccgaactgagtcaacaat 6127224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 7412438 - 7412344
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 154  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||||| |||||| || ||||| | ||||||||||||||||    
T  7412438 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggtcaacaat 7412344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 31071229 - 31071326
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||| |||||||||||||    
T  31071229 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactcggtcaacaatctt 31071326  T

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Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 4696624 - 4696714
Alignment:
Q  89 catattggattggagagctgctctctcccccagattaggccacattggct-gaactgggtcaacaatcttgctcggtgtttgttcttttcttt 180  Q
    |||| |||||||||| ||||||||||||||||||||||| || ||||| | |||||||||||||||||||| |  |||||||||| |||||||    
T  4696624 catagtggattggagggctgctctctcccccagattaggtcatattggatcgaactgggtcaacaatcttggt--gtgtttgttcatttcttt 4696714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 9765852 - 9765914
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatc 155  Q
    |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||    
T  9765852 tggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatc 9765914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 19752394 - 19752492
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||||| || ||||||| |||| | || ||||||||||||||||||||||||| ||| |||| || ||||| | ||||| ||||||||||||||    
T  19752394 ttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctctcccctagactaggtcatattggaccgaactaggtcaacaatcttg 19752492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 43079877 - 43079937
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  43079877 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 43079937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 43082248 - 43082308
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  43082248 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 43082308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 18810982 - 18811015
Alignment:
Q  94 tggattggagagctgctctctcccccagattagg 127  Q
    |||||||||| |||||||||||||||||||||||    
T  18810982 tggattggagggctgctctctcccccagattagg 18811015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 44721118 - 44721178
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||||||||||||||||| |||| |||| ||  |||| | |||||||||||||||    
T  44721118 tggattggagagctgctctctcccgcagactaggtcaatttggaccgaactgggtcaacaa 44721178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 264; Significance: 1e-147; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 6005563 - 6005289
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6005563 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 6005464  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttgtatgcttgttagctc 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  6005463 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttc-cttttatcgtttatcttgtatgcttgttagctc 6005365  T
Q  212 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6005364 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 6005289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 16838890 - 16838616
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16838890 caaagggtagatctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 16838791  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttgtatgcttgttagctc 211  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  16838790 tctcccccagattaagccacattggctgaactgggtcaacaatcttgctcggtgtttgttcgttt-tcttttatcgtttatcttgtatgcttgttagctc 16838692  T
Q  212 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16838691 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttgaaggccatttgcactcatagat 16838616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 33330384 - 33330660
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33330384 caaagggtagatctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 33330483  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttg-tatgcttgttagct 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| || |||||||||| ||||||||||||||    
T  33330484 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgtttgttcttttc-ttttcatggtttatcttgttatgcttgttagct 33330582  T
Q  211 cttagtgtgg-ttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33330583 cttagtgtggtttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 33330660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 33335881 - 33336157
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33335881 caaagggtagatctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 33335980  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttg-tatgcttgttagct 210  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||| || |||||||||| ||||||||||||||    
T  33335981 tctcccccagattaggtcacattggctgaactgggtcaacaatcttgcttggtgtttgttcttttc-ttttcatggtttatcttgttatgcttgttagct 33336079  T
Q  211 cttagtgtgg-ttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33336080 cttagtgtggtttttactatacattaggcttaggctgttttgttgttgttagtttggaggccatttgcactcatagat 33336157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 12 - 283
Target Start/End: Original strand, 28155510 - 28155780
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  28155510 caaagggtagatctagggtttgttcatgtgtaaagcttgaaa-gctaaattcttgtaac-cttttgtaacactttctcatattggattggagagctgctc 28155607  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgttag 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |   |||| |||||||||||  ||||||||||||    
T  28155608 tctcccccagattaggccacattggctgaactgggtcaacaatcttgttcggtgttttgttctttcc--atttaccgtttatcttgtttatgcttgttag 28155705  T
Q  209 ctcttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcat 283  Q
    ||||||||||||||||||||||||  || | |||||||||||||||||||||||||| || |||||||| |||||    
T  28155706 ctcttagtgtggttttgctatacacaagtcataggctgttttgttgttgttagcttgaagaccatttgctctcat 28155780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 12 - 274
Target Start/End: Complemental strand, 6438645 - 6438385
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  6438645 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 6438548  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgttag 208  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||| |  ||||| |||||||||||  ||||||||||||    
T  6438547 tctcccccagattaggccatattggctgaactgggacaacaatcttgctcggtgttttgttctttcc--ttttaccgtttatcttgtttatgcttgttag 6438450  T
Q  209 ctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatt 274  Q
    ||||| |||||||||||||||||| || ||||| ||||| |||||||||||| ||||||| ||||||    
T  6438449 ctctttgtgtggttttgctatacacta-gcttagggctg-tttgttgttgtttgcttggaagccatt 6438385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 112 - 287
Target Start/End: Complemental strand, 5343527 - 5343352
Alignment:
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttgtatgcttgttagctc 211  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  |||||||||||||||||||||||||||||||    
T  5343527 tctcccctagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcgttt-tcctttatcgtttatcttgtatgcttgttagctc 5343429  T
Q  212 ttagtgtggtttt-gctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5343428 ttagtgtggtttttgctatactttaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 5343352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 23 - 276
Target Start/End: Complemental strand, 11857108 - 11856854
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||     
T  11857108 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccat 11857011  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttctt--ttttatcgtttatcttg-tatgc-ttgttagctcttagtg 217  Q
    ||||||||| |||||||||||||||||||||||||| || ||||||| || | |||||  |||||||| || ||||| | ||| ||| || ||||| |||    
T  11857010 attaggccatattggctgaactgggtcaacaatctt-cttggtgttt-ttttgttcttccttttatcgcttgtcttgttttgctttggtatctctttgtg 11856913  T
Q  218 tggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||||||||||||| ||| ||  |||||||||||||||||| |||||||| |||||||    
T  11856912 tggttttgctatacactagtctagggctgttttgttgttgtttgcttggagaccatttg 11856854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 23 - 275
Target Start/End: Complemental strand, 28184638 - 28184388
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 122  Q
    ||||||||||||||||||||||||||||||  |||||| | ||||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||    
T  28184638 tctagggtttgttcatgtgtaaagcttgaag-gctagagtgttgtaac-cttttgtaacactttctcatattagattggagagctgctctctcccccaga 28184541  T
Q  123 ttaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagtgt 218  Q
    |||||||| |||||||||||||||||||||||||| ||||||| ||||||||||   |||||| || ||||||||  ||||| |||  | ||||| ||||    
T  28184540 ttaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttt--ctttttaccgcttatcttgtttatgctttggaatctctt-gtgt 28184445  T
Q  219 ggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccattt 275  Q
    |||||||||||||| ||| ||  |||||||||||||||||| |||||||| ||||||    
T  28184444 ggttttgctatacactagtctagggctgttttgttgttgtttgcttggagaccattt 28184388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 23 - 276
Target Start/End: Original strand, 14737528 - 14737779
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 122  Q
    |||||||||||||||| |||||||||||||  |||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  14737528 tctagggtttgttcatatgtaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 14737625  T
Q  123 ttaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg-tatgc-ttgttagctc-ttagtgt 218  Q
    |||||||| |||||||||||||| ||||||||||| ||||||| |||||||||   | ||||| || |||||||| | ||| ||| || ||| || ||||    
T  14737626 ttaggccatattggctgaactggatcaacaatctt-ctcggtgttttgttctt---tcttttaccgcttatcttgttttgctttggtatctcttttgtgt 14737721  T
Q  219 ggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    |||||||||||||| ||| ||  |||||||||||||||||| |||||||| |||||||    
T  14737722 ggttttgctatacactagtctagggctgttttgttgttgtttgcttggagaccatttg 14737779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 23 - 276
Target Start/End: Original strand, 22010648 - 22010899
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  22010648 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 22010745  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg-tatgc-ttgttagctcttagtgt 218  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| |||||||||     |||||||| |||||||| | ||| ||| || ||||| ||||    
T  22010746 attaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---ccttttatcgcttatcttgttttgctttggtatctctttgtgt 22010841  T
Q  219 ggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    |||||||||||||| | | ||  ||| | |||||||||||| |||||||| |||||||    
T  22010842 ggttttgctatacacttgtctagggcggctttgttgttgtttgcttggagaccatttg 22010899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 23 - 276
Target Start/End: Original strand, 14742388 - 14742638
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 122  Q
    |||||||||||||||| |||||||||||||  |||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||| |    
T  14742388 tctagggtttgttcatatgtaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaaa 14742485  T
Q  123 ttaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg-tatgc-ttgttagctcttagtgtg 219  Q
    ||||| || |||||||||||||||||||||||||| ||||||| |||||||||   | ||||| || |||||||| | ||| ||| || ||||| |||||    
T  14742486 ttaggtcatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---tcttttaccgcttatcttgttttgctttgatatctctttgtgtg 14742581  T
Q  220 gttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||||||||||| ||| ||  |||||||||||||||||  |||||||| |||||||    
T  14742582 gttttgctatacactagtctagggctgttttgttgttgtatgcttggagaccatttg 14742638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 5674770 - 5674865
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatct 156  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5674770 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatct 5674865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 5572240 - 5572359
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||||| |||||||| || ||||| | ||| ||||||||||||||||    
T  5572240 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaattgggtcaacaatcttg 5572339  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  5572340 gt--gtgtttgttcatttcttt 5572359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 5757478 - 5757575
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  5757478 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 5757575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 10077164 - 10077283
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||| ||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||| ||||||||||||||||    
T  10077164 ttcttgtaacttttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaattgggtcaacaatcttg 10077263  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  10077264 gt--gtgtttgttcctttcttt 10077283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 31086472 - 31086591
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||||| |||||||||| |||| |||| |||||||||||| |||||||||||| |||||||  || ||||| ||||||||||||||||||||||    
T  31086472 ttcttgtaactcctttgtaacactttcatcatagtggattggagagttgctctctcccctagattagatcatattggactgaactgggtcaacaatcttg 31086571  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  31086572 gt--gtgtttgttcctttcttt 31086591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 31979611 - 31979512
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||| ||||| |||| | || |||||||||| ||||||||||||||||||||| | || ||||| | ||||||||||||||||||||    
T  31979611 ttcttgtaactcttttgcaacactttcatcttagtggattggagggctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttg 31979512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 4630052 - 4629954
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||| ||||||||||| |||| | || ||||||||||||||||||||| ||| |||||||| || ||||| |||||||| ||||||||||||    
T  4630052 ttcttgtaactattttgtaacactttcatcttagtggattggagagctgctctcttccctagattaggtcatattggactgaactgagtcaacaatctt 4629954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 21356133 - 21356036
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||  ||||||| |||| |||| ||||||||||||||||||||||| |||||||||| || ||||| | |||||||||||||||||||    
T  21356133 ttcttgtaactctta-gtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggtcaacaatctt 21356036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 22963797 - 22963679
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||| ||||||||| || || ||||  | ||||||||||||||||||||    
T  22963797 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagatttggtcatattgcaccgaactgggtcaacaatcttg 22963699  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  22963698 gt--gtgtttgttcctttcttt 22963679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 23824596 - 23824714
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||| ||||||||| || || ||||  | ||||||||||||||||||||    
T  23824596 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagatttggtcatattgcaccgaactgggtcaacaatcttg 23824694  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  23824695 gt--gtgtttgttcctttcttt 23824714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 21801343 - 21801429
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgg 145  Q
    ||||||||||||||||||||||| || | | || |||||||||||||||||| ||||||||||||||| || ||||| |||||||||    
T  21801343 ttcttgtaactcttttgtaacacttttatcttagtggattggagagctgctcgctcccccagattaggtcatattggactgaactgg 21801429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 18232943 - 18232867
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg 136  Q
    ||||||||||||||||||||||| |||| |||| || ||||||| | ||||||||||||||||||||| || |||||    
T  18232943 ttcttgtaactcttttgtaacactttcatcatagtgaattggagggttgctctctcccccagattaggtcatattgg 18232867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 22709102 - 22709050
Alignment:
Q  75 ttgtaacacattca-catattggattggagagctgctctctcccccagattag 126  Q
    ||||||||| |||| |||| |||||||||||||||||||||||||||||||||    
T  22709102 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattag 22709050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 31936651 - 31936586
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||||||||||||||| |||||| |||| || ||||| | ||||| ||||||||||||||    
T  31936651 tggattggagagctgctctctctcccagactaggtcatattggaccgaactaggtcaacaatcttg 31936586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 180
Target Start/End: Original strand, 5017482 - 5017587
Alignment:
Q  75 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccaca-ttggctgaactgggtcaacaatcttgctcggtgtttgttc 172  Q
    ||||||||| |||| |||| | |||||||| | |||||||||||| |||||||| || | ||| | |||||||||||||||||||| |  ||||||||||    
T  5017482 ttgtaacactttcatcatagtagattggagggttgctctctcccctagattaggtcatatttgaccgaactgggtcaacaatcttggt--gtgtttgttc 5017579  T
Q  173 ttttcttt 180  Q
     |||||||    
T  5017580 ctttcttt 5017587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 12195575 - 12195515
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  12195575 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 12195515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 4816291 - 4816231
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  4816291 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 4816231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 5273276 - 5273216
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  5273276 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 5273216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 19704627 - 19704567
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  19704627 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 19704567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 20915416 - 20915356
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  20915416 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 20915356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 26932622 - 26932562
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| | |||||||||||||||| |||| || ||||| | |||||||||||||||    
T  26932622 tggattggagggttgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 26932562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 29754769 - 29754709
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  29754769 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 29754709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 30125940 - 30126008
Alignment:
Q  209 ctcttagtgtggttttgctatacattaggcttaggctgtttt-gttgttgttagcttggaggccatttg 276  Q
    ||||| ||||||||||||| |||| ||| ||  ||||||||| ||||| |||||||||||| |||||||    
T  30125940 ctctttgtgtggttttgctctacactagtctagggctgtttttgttgtagttagcttggagaccatttg 30126008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 33309110 - 33309170
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  33309110 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 33309170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 2785521 - 2785247
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2785521 caaagggtaggtctagggtttgttcatgagtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 2785422  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttgtatgcttgttagctc 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  2785421 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttc-cttttatcgtttatcttgtatgcttgttagctc 2785323  T
Q  212 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2785322 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 2785247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 33791462 - 33791188
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33791462 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 33791363  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttgtatgcttgttagctc 211  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  33791362 tttcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttc-cttttatcgtttatcttgtatgcttgttagctc 33791264  T
Q  212 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33791263 tatatgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 33791188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 13 - 287
Target Start/End: Complemental strand, 33768324 - 33768051
Alignment:
Q  13 aaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctct 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33768324 aaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctct 33768225  T
Q  113 ctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttgtatgcttgttagctct 212  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  33768224 cccccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttc-cttttatcgtttatcctgtatgcttgttagctct 33768126  T
Q  213 tagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33768125 atatgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggtcatttgcactcatagat 33768051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 31396930 - 31397206
Alignment:
Q  12 caaagggtaggtctagggtttgtt--catgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgc 109  Q
    |||||||||| |||||||||| ||  | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31396930 caaagggtagatctagggttttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgc 31397029  T
Q  110 tctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttgtatgcttgttagc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || | ||||||||||||||||||||||||||||||    
T  31397030 tctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgtt-tgttttcttttatcgtttatcttgtatgcttgttagc 31397128  T
Q  210 tcttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31397129 tcttagtgtggttttgctttacattaggcttaggatgttttgttgttgttagcttggaggccatttgcactcatagat 31397206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 31401787 - 31402063
Alignment:
Q  12 caaagggtaggtctagggtttgtt--catgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgc 109  Q
    |||||||||| ||||| |||| ||  | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31401787 caaagggtagatctagagttttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgc 31401886  T
Q  110 tctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttgtatgcttgttagc 209  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||    
T  31401887 tctctcccccatattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcgttt-tcttttatcgtttatcttgtatgcttgttagc 31401985  T
Q  210 tcttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31401986 tcttagtgtggttttgctttacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 31402063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 37556562 - 37556837
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||    
T  37556562 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagatacttgtaac-cttttgtaacactttcacatattggattggagagctgctc 37556660  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgttag 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |   |||| |||||||||||  ||||||||||||    
T  37556661 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttcc--atttaccgtttatcttgtttatgcttgttag 37556758  T
Q  209 ctcttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||||||||||||||  || | |||||||||||||||||||||||||||||||||||||| |||||||||    
T  37556759 ctcttagtgtggttttgctatacacaagtcataggctgttttgttgttgttagcttggaggccatttgctctcatagat 37556837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 37561384 - 37561659
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||    
T  37561384 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagatacttgtaac-cttttgtaacactttcacatattggattggagagctgctc 37561482  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgttag 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |   |||| |||||||||||  ||||||||||||    
T  37561483 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttcc--atttaccgtttatcttgtttatgcttgttag 37561580  T
Q  209 ctcttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||||||||||||||  || | |||||||||||||||||||||||||||||||||||||| |||||||||    
T  37561581 ctcttagtgtggttttgctatacacaagtcataggctgttttgttgttgttagcttggaggccatttgctctcatagat 37561659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 12 - 276
Target Start/End: Original strand, 28807514 - 28807777
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  28807514 caaagggtagatctagggtttgttcatgtgtaaagcttgaaa-gctagattcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 28807610  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgttag 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |  ||||| |||||||||||  ||||||||||||    
T  28807611 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttcc--ttttaccgtttatcttgtttatgcttgttag 28807708  T
Q  209 ctcttagtgtgg--ttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||| | ||||  |||||||||||| || ||||| ||||| |||||||||||| ||||||| ||||||||    
T  28807709 ctctttgagtggttttttgctatacacta-gcttagggctg-tttgttgttgtttgcttggaagccatttg 28807777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 23 - 276
Target Start/End: Original strand, 1457113 - 1457364
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  1457113 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 1457210  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagtg 217  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||  ||| ||| | ||  ||||||||  ||||| |||||| ||||| |||    
T  1457211 attaggccacattggctgaactgggtcaacaatctt-ctcggtgttttgttc--ttcctttctttc--ttatcttgtttatgctttgttatctctttgtg 1457305  T
Q  218 tggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||||||||||||| ||| ||  ||||| |||||||||||| |||||||| |||||||    
T  1457306 tggttttgctatacactagtctagggctgctttgttgttgtttgcttggagaccatttg 1457364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 23 - 276
Target Start/End: Complemental strand, 43592413 - 43592161
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  43592413 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 43592316  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagtg 217  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| |||||||||     |||||||  ||||||||  ||||| |||||| ||||| |||    
T  43592315 attaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---ccttttatcacttatcttgtttatgctttgttatctctttgtg 43592220  T
Q  218 tggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||||||||||||| ||| ||  ||||| |||||||||||| |||||||| |||||||    
T  43592219 tggttttgctatacactagtctagggctgctttgttgttgtttgcttggagaccatttg 43592161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 23 - 283
Target Start/End: Complemental strand, 27449948 - 27449689
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  27449948 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 27449851  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagtg 217  Q
    ||||||| | |||||||||||||||||||||||||| ||||||| |||||||||     |||||||  ||||||||  ||||| |||||| ||||| |||    
T  27449850 attaggctatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---ccttttatcacttatcttgtttatgctttgttatctctttgtg 27449755  T
Q  218 tggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcat 283  Q
    ||||||||||||||| ||| ||  ||||| | |||||||||| |||||||| ||||||| ||||||    
T  27449754 tggttttgctatacactagtctagggctgctatgttgttgtttgcttggagaccatttgtactcat 27449689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 23 - 283
Target Start/End: Complemental strand, 27445104 - 27444845
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  27445104 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 27445007  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagtg 217  Q
    ||||||| | |||| ||||||||||||||||||||| ||||||| |||||||||     |||||||  ||||||||  ||||| |||||| ||||| |||    
T  27445006 attaggctatattgcctgaactgggtcaacaatctt-ctcggtgttttgttctt---ccttttatcacttatcttgtttatgctttgttatctctttgtg 27444911  T
Q  218 tggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcat 283  Q
    ||||||||||||||| ||| ||  ||||| | |||||||||| |||||||| ||||||| ||||||    
T  27444910 tggttttgctatacactagtctagggctgctatgttgttgtttgcttggagaccatttgtactcat 27444845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 23 - 268
Target Start/End: Complemental strand, 43598858 - 43598614
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  43598858 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 43598761  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagtg 217  Q
    ||||||||| ||||||||||||||  |||||||||| ||||||| |||||||||     |||||||  ||||||||  ||||| |||||| ||||| |||    
T  43598760 attaggccatattggctgaactggaccaacaatctt-ctcggtgttttgttctt---ccttttatcacttatcttgtttatgctttgttatctctttgtg 43598665  T
Q  218 tggttttgctatacattaggcttaggctgttttgttgttgttagcttggag 268  Q
    ||||||||||||||| ||| ||  ||||| |||||||||||| ||||||||    
T  43598664 tggttttgctatacactagtctagggctgctttgttgttgtttgcttggag 43598614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 23 - 268
Target Start/End: Complemental strand, 43604350 - 43604106
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  43604350 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 43604253  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagtg 217  Q
    ||||||||| ||||||||||||||  |||||||||| ||||||| |||||||||     |||||||  ||||||||  ||||| |||||| ||||| |||    
T  43604252 attaggccatattggctgaactggaccaacaatctt-ctcggtgttttgttctt---ccttttatcacttatcttgtttatgctttgttatctctttgtg 43604157  T
Q  218 tggttttgctatacattaggcttaggctgttttgttgttgttagcttggag 268  Q
    ||||||||||||||| ||| ||  ||||| |||||||||||| ||||||||    
T  43604156 tggttttgctatacactagtctagggctgctttgttgttgtttgcttggag 43604106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 23 - 268
Target Start/End: Complemental strand, 43609842 - 43609598
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  43609842 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 43609745  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagtg 217  Q
    ||||||||| ||||||||||||||  |||||||||| ||||||| |||||||||     |||||||  ||||||||  ||||| |||||| ||||| |||    
T  43609744 attaggccatattggctgaactggaccaacaatctt-ctcggtgttttgttctt---ccttttatcacttatcttgtttatgctttgttatctctttgtg 43609649  T
Q  218 tggttttgctatacattaggcttaggctgttttgttgttgttagcttggag 268  Q
    ||||||||||||||| ||| ||  ||||| |||||||||||| ||||||||    
T  43609648 tggttttgctatacactagtctagggctgctttgttgttgtttgcttggag 43609598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 23 - 276
Target Start/End: Complemental strand, 15044819 - 15044569
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 122  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||| |    
T  15044819 tctagggtttgttcatgtgtaaagcttgaaa-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccata 15044722  T
Q  123 ttaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagtgt 218  Q
    |||||||| |||||||||||||||||||||||||| || |||| |||||||||     |||| | | ||||||||  ||||| |||  | ||||| ||||    
T  15044721 ttaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttctt---ccttttcttgcttatcttgtttatgctttggaatctctt-gtgt 15044627  T
Q  219 ggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    |||||||||||||| ||| ||  |||||||||||||||||| | |||||| |||||||    
T  15044626 ggttttgctatacactagtctagggctgttttgttgttgttggtttggagaccatttg 15044569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 30631541 - 30631407
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga--ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccca 120  Q
    |||| |||||||||||||||||||||||||  ||||||  |||||||||| |||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  30631541 tctatggtttgttcatgtgtaaagcttgaag-gctagagtttcttgtaacccttt-gtaacactttctcatattggattggagagctgctctctccccca 30631444  T
Q  121 gattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||||||||||||||||| ||||||||||||    
T  30631443 gattaggccacattggctgaactgagtcaacaatctt 30631407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 23 - 232
Target Start/End: Complemental strand, 31180348 - 31180141
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga--ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccca 120  Q
    |||||||||||| | |||||||||||||||  ||||||  |||||||||| |||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  31180348 tctagggtttgt-cttgtgtaaagcttgaag-gctagagtttcttgtaacccttt-gtaacactttctcatattggattggagagctgctctctccccca 31180252  T
Q  121 gattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagt 216  Q
    |||||||||| |||||||||||||||||||||||||| || |||| ||||||| ||||||| || ||  ||||||||  ||||| |||||| ||||| ||    
T  31180251 gattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttc-tttctttctt-tc--ttatcttgtttatgctttgttatctctttgt 31180157  T
Q  217 gtggttttgctataca 232  Q
    ||||||||||||||||    
T  31180156 gtggttttgctataca 31180141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 38192270 - 38192174
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38192270 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 38192174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 38219495 - 38219399
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38219495 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 38219399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 10281849 - 10281751
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||| ||| || ||||| | |||||||||||||||||||    
T  10281849 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagatcaggtcatattggaccgaactgggtcaacaatctt 10281751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 35387759 - 35387663
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| | ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  35387759 ttcttgtaacccttt-gtaacactttcatcatagtagattggagagctgctctctcccccagattaggccatattggctgaattgggtcaacaatctt 35387663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 9353332 - 9353429
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  9353332 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 9353429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 36932350 - 36932447
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  36932350 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 36932447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 11916971 - 11917068
Alignment:
Q  61 ttcttgtaactcttttgtaacacattcac-atattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatct 156  Q
    ||||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||||| |||||| || ||||| | ||||||||||||||||||    
T  11916971 ttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggtcaacaatct 11917068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 24135945 - 24135849
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| | || || |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24135945 ttcttgtaacccttt-gtaacactttcatcttagtgcattggatagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 24135849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 17003962 - 17004078
Alignment:
Q  64 ttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttgctc 161  Q
    |||||||||||||| || || |||| |||| ||||||| |||||||||||||||||||||||||| || ||||| | |||||||||||||||||||| |     
T  17003962 ttgtaactcttttgaaatactttcatcatagtggattgaagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggt- 17004060  T
Q  162 ggtgtttgttcttttcttt 180  Q
     |||||||||| |||||||    
T  17004061 -gtgtttgttcctttcttt 17004078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 15464629 - 15464532
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||  || ||||| | |||||||||||||||||||    
T  15464629 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattggaccgaactgggtcaacaatctt 15464532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 3880397 - 3880298
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| || ||||||||| || ||||| | ||||||  ||||||||||||    
T  3880397 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctgcctcagattaggtcatattggacagaactgaatcaacaatcttg 3880298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 19588844 - 19588746
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||||  |||||||  || ||||| | |||||||||||||||||||    
T  19588844 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccctaagattagttcatattggaccgaactgggtcaacaatctt 19588746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 14520327 - 14520230
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||| ||||||| |||||||||||| |||| |||||||| || ||||| | |||||||||||||||||||    
T  14520327 ttcttgtaactcttt-gtaacactttcatcatagtggattgaagagctgctctcccccctagattaggtcatattggaccgaactgggtcaacaatctt 14520230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 12084175 - 12084269
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 154  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||| ||||| |||||| || | ||| | ||||||||||||||||    
T  12084175 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctgccccatattaggtcatagtggaccgaactgggtcaacaat 12084269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 28832356 - 28832258
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||||| || ||||||| |||| | || |||||||||| ||||||||||||||||||||||| || ||||| | |||| |||||||||||||||    
T  28832356 ttcttgtaactcatt-gtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaaccgggtcaacaatcttg 28832258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 42127410 - 42127528
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggct-gaactgggtcaacaatcttg 158  Q
    |||||||||||| || ||||||| |||| | || |||||||| | ||||||||||||||||||||||| || ||| | | ||||||||||||||||||||    
T  42127410 ttcttgtaactcatt-gtaacactttcatcttagtggattggggggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaatcttg 42127508  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  42127509 gt--gtgtttgttcctttcttt 42127528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 4410241 - 4410301
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||||||||||||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  4410241 tggattggagagctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 4410301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 15552464 - 15552524
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  15552464 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 15552524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 31179431 - 31179371
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31179431 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31179371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 31542953 - 31543013
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31542953 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31543013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 31545299 - 31545359
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31545299 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31545359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 27910675 - 27910729
Alignment:
Q  100 ggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||||||||||||||||||||| ||  |||| | |||||||||||||||    
T  27910675 ggagagctgctctctcccccagattaggtcaatttggaccgaactgggtcaacaa 27910729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 180
Target Start/End: Original strand, 24553496 - 24553624
Alignment:
Q  50 gaaaagctagattcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggt 147  Q
    |||||||||  |||||||||||| || ||||||| |||| | || |||| ||||| |||||||||||||  |||||||| || ||||| | ||||||| |    
T  24553496 gaaaagctaatttcttgtaactcatt-gtaacactttcatcttagtggagtggag-gctgctctctcccatagattaggtcatattggaccgaactggat 24553593  T
Q  148 caacaatcttgctcggtgtttgttcttttcttt 180  Q
    ||||||||||| |  |||||||||| |||||||    
T  24553594 caacaatcttggt--gtgtttgttcctttcttt 24553624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 31300629 - 31300694
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||||| | ||||||||| |||| |||| || ||||| | ||||||||||||||||||||    
T  31300629 tggattggagagtttctctctccctcagactaggtcatattggaccgaactgggtcaacaatcttg 31300694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 3373197 - 3373137
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| | |||||||||||||||| |||| || ||||| | |||||||||||||||    
T  3373197 tggattggagggttgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 3373137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 10749919 - 10749979
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  10749919 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 10749979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 15354635 - 15354575
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  15354635 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 15354575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 19344567 - 19344292
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19344567 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 19344468  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatgcttgttagct 210  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  19344467 tctcccctagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttttc-cttttatcgtttatcttgtatgcttgttagct 19344369  T
Q  211 cttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19344368 cttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgctctcatagat 19344292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 19349425 - 19349150
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19349425 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 19349326  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatgcttgttagct 210  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  19349325 tctcccctagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttttc-cttttatcgtttatcttgtatgcttgttagct 19349227  T
Q  211 cttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19349226 cttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgctctcatagat 19349150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 23 - 287
Target Start/End: Complemental strand, 32246921 - 32246656
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 122  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  32246921 tctagggtttgttcatgtgtaaagcttgaaa-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 32246824  T
Q  123 ttaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagtgt 218  Q
    |||||||| |||||||||||  |||||||||||||| |||||| |||||||||   |||||| | | ||||||||  ||||| |||  | ||||| ||||    
T  32246823 ttaggccatattggctgaacaaggtcaacaatcttgttcggtgttttgttcttcctttttttcttgcttatcttgtttatgctttggaatctctt-gtgt 32246725  T
Q  219 ggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    |||||||||||||| ||| ||  | ||||||||||||||||||||||||| |||||||  |||||||||    
T  32246724 ggttttgctatacactagtctaggactgttttgttgttgttagcttggagaccatttgttctcatagat 32246656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 23 - 276
Target Start/End: Original strand, 44312575 - 44312826
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  44312575 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 44312672  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg-tatgc-ttgttagctcttagtgt 218  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| |||||||||     |||||||| |||||||| | ||| ||| || ||||| ||||    
T  44312673 attaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---ccttttatcgcttatcttgttttgctttggtatctctttgtgt 44312768  T
Q  219 ggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    |||||||||||||| | | ||  ||| | |||||||||||| |||||||| |||||||    
T  44312769 ggttttgctatacacttgtctagggcggctttgttgttgtttgcttggagaccatttg 44312826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 23 - 276
Target Start/End: Original strand, 39811940 - 39812190
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 122  Q
    ||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  39811940 tctagggtttgttcatgtgtaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 39812037  T
Q  123 ttaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatg---cttgttagctcttagtgt 218  Q
    |||||||| |||||||||||||| ||||||||||| ||||||| |||||||||   | ||||| || ||||||||| ||    |||  | ||||| ||||    
T  39812038 ttaggccatattggctgaactggttcaacaatctt-ctcggtgttttgttctt---tcttttaccgcttatcttgtttgtgctttggaatctctt-gtgt 39812132  T
Q  219 ggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttg 276  Q
    |||||||||||||| || ||||| |||||||||||||||||| |||||||| |||||||    
T  39812133 ggttttgctatacacta-gcttagggctgttttgttgttgttggcttggagaccatttg 39812190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 61 - 267
Target Start/End: Complemental strand, 14291585 - 14291380
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgc 159  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  14291585 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-c 14291488  T
Q  160 tcggtg-tttgttcttttcttttttatcgtttatcttg-tatgc-ttgttagctcttagtgtggttttgctatacattaggcttaggctg-ttttgttgt 255  Q
    | |||| ||||||| || |||| ||   | |||||||| | ||| |||||| ||||| ||||||||||||| |||||||| ||  ||||| |||||||||    
T  14291487 ttggtgttttgttc-ttcctttctt---gcttatcttgttttgctttgttatctctttgtgtggttttgctctacattagtctagggctgtttttgttgt 14291392  T
Q  256 tgttagcttgga 267  Q
    |||| |||||||    
T  14291391 tgtttgcttgga 14291380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 157
Target Start/End: Original strand, 11098889 - 11099023
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagcta--gattcttgtaactcttttgtaacacattca-catattggattggagagctgctctctccccc 119  Q
    |||||||||||||| ||||||| ||||| || ||||  | |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||    
T  11098889 tctagggtttgttcttgtgtaa-gcttgcaa-gctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctccccc 11098985  T
Q  120 agattaggccacattggctgaactgggtcaacaatctt 157  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  11098986 agattaggccatattggctgaactgggtcaacaatctt 11099023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 3491847 - 3491751
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3491847 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 3491751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 9296401 - 9296497
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  9296401 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccaaattaggccatattggctgaactgggtcaacaatctt 9296497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 21630041 - 21629923
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||    
T  21630041 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggactgaactgggtcaacaatcttg 21629943  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  21629942 gt--gtgtttgttcctttcttt 21629923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 25398592 - 25398496
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  25398592 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctgaactgggtcaacaatctt 25398496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 13569426 - 13569331
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 154  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||    
T  13569426 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 13569331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 8040149 - 8040059
Alignment:
Q  70 ctcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||    
T  8040149 ctcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggactgaactgggtcaacaatcttg 8040059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 25403730 - 25403634
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||    
T  25403730 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctgaactgagtcaacaatctt 25403634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 10445443 - 10445542
Alignment:
Q  61 ttcttgtaactcttttgtaacacattcaca-tattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| | || |||||||||||||||||||||||||||||||||| || ||||| | ||||||| ||||||||||||    
T  10445443 ttcttgtaactcttttgtaacactttcataatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaatcttg 10445542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 17865301 - 17865202
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacatt-ggctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| | ||||||||||||||||||||| || ||| | ||||||||||||||||||||||    
T  17865301 ttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattcgactgaactgggtcaacaatcttg 17865202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 34682333 - 34682432
Alignment:
Q  61 ttcttgtaactcttttgtaacacattcac-atattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||||||||||||| | || ||||| | ||||||||||||||||||||    
T  34682333 ttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttg 34682432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 14699007 - 14699125
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||| | |||| |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  14699007 ttcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 14699105  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  14699106 gt--gtgtttgttcctttcttt 14699125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 20522318 - 20522199
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||| |||||||||||| |||| |||| |||||||||| | ||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  20522318 ttcttgtaacccttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 20522219  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  20522218 gt--gtgtttgttcctttcttt 20522199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 34388956 - 34388837
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||| || ||||| | ||| |||||||||||||| |    
T  34388956 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatctcg 34388857  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  34388856 gt--gtgtttgttcctttcttt 34388837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 40738926 - 40738844
Alignment:
Q  75 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    ||||||||| |||| |||| |||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||    
T  40738926 ttgtaacactttcatcatagtggattggagagctgctctc-cccccagattaggtcatattggctgaactgggtcaacaatctt 40738844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 8390149 - 8390268
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||||||||| |||||| |||| |||| ||||||||||||||||||||||||||| |||||| ||  |||| | |||||||||||||||| |||    
T  8390149 ttcttgtaactcttttttaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcattttggaccgaactgggtcaacaattttg 8390248  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  8390249 gt--gtgtttgttcatttcttt 8390268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 28259177 - 28259274
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||||| |||||| || ||||| | |||||||||||||||||||    
T  28259177 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgggtcaacaatctt 28259274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 10707251 - 10707348
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatct 156  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||| || ||||||||||| |||||| || ||||| | ||||||||||||||||||    
T  10707251 ttcttgtaactcttttgtaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattggaccgaactgggtcaacaatct 10707348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 33528620 - 33528739
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| | ||||||||  |||| |||||| || ||||| | ||||||||||||||||||||    
T  33528620 ttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctttcccatattaggtcatattggaccgaactgggtcaacaatcttg 33528719  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  33528720 gt--gtgtttgttcctttcttt 33528739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 31056139 - 31056044
Alignment:
Q  64 ttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatctt 157  Q
    |||||||||||||||||||| |||| | || ||||||||||||||||||||||||| |||||||| || ||||  | ||||| |||||||||||||    
T  31056139 ttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccctagattaggtcatattgaaccgaactaggtcaacaatctt 31056044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 39483029 - 39482930
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||  |||| |||| ||||||||||  ||||||||||||||| |||||| || ||||| | ||||| ||||||||||||||    
T  39483029 ttcttgtaactcttttgtaacattttcatcatagtggattggaggcctgctctctcccccatattaggtcatattggaccgaactaggtcaacaatcttg 39482930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 16940208 - 16940327
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||| |||| ||| |||||||||||| | || ||||| | ||| ||||||||||||||||    
T  16940208 ttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtcaacaatcttg 16940307  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  16940308 gt--gtgtttgttcctttcttt 16940327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 17010873 - 17010992
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||| |||| ||| |||||||||||| | || ||||| | ||| ||||||||||||||||    
T  17010873 ttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtcaacaatcttg 17010972  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  17010973 gt--gtgtttgttcctttcttt 17010992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 33118234 - 33118115
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||| ||||||||| | |||| |||| |||||||||| |||||||||||||||| |||||| || ||||| | |||||| | |||||||||||    
T  33118234 ttcttgtaactattttgtaactctttcatcatagtggattggagggctgctctctcccccaaattaggtcatattggaccgaactgagccaacaatcttg 33118135  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  33118134 gt--gtgtttgttcctttcttt 33118115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 25407719 - 25407653
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattagg 127  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  25407719 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattagg 25407653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 23078470 - 23078567
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggct-gaactgggtcaacaatctt 157  Q
    |||||||||||||||  |||||| |||| |||| |||||||||||| || ||||||||||| |||||| || ||||| | |||||||||||||| ||||    
T  23078470 ttcttgtaactctttc-taacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattggatcgaactgggtcaacattctt 23078567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 42039669 - 42039766
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||  ||||||| |||| |||| |||||| ||||||||||||||||| ||||||||| || ||||| | ||||| | |||||||||||    
T  42039669 ttcttgtaactcttc-gtaacactttcatcatagtggattagagagctgctctctcccacagattaggtcatattggaccgaactagatcaacaatctt 42039766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 35215646 - 35215586
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  35215646 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 35215586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 35218023 - 35217963
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  35218023 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 35217963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 2838029 - 2838124
Alignment:
Q  61 ttcttgtaactcttttgtaacacattcacat-attggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 154  Q
    |||||||||||| |||||| ||| ||||  | | |||||||||||  |||||||||||||||| |||| || ||||| | ||||||||||||||||    
T  2838029 ttcttgtaactcatttgtatcactttcattttagtggattggagatgtgctctctcccccagagtaggtcatattggaccgaactgggtcaacaat 2838124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 2869692 - 2869787
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 154  Q
    |||||||||||| |||||| ||| |||| | || |||||||||||||| |||||||||| ||| |||| || ||||| | ||||||||| ||||||    
T  2869692 ttcttgtaactcctttgtatcactttcatcttagtggattggagagctactctctcccctagagtaggtcatattggaccgaactgggtaaacaat 2869787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 36757762 - 36757859
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||| ||||||||| | ||||| |||| |||| ||||||||||||||| | || ||||||||||||| || ||||| | ||| |||||||||||||||    
T  36757762 ttcttataactcttt-gaaacactttcatcatactggattggagagctgttatcccccccagattaggtcatattggaccgaattgggtcaacaatctt 36757859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 1345574 - 1345635
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 154  Q
    ||||| |||||| |||||||||||||||| |||| || ||||| | ||||||||||||||||    
T  1345574 tggatcggagaggtgctctctcccccagagtaggtcatattggaccgaactgggtcaacaat 1345635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 45332238 - 45332181
Alignment:
Q  97 attggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  45332238 attggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 45332181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 23452297 - 23452237
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  23452297 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 23452237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 36558924 - 36558864
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  36558924 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 36558864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 36561201 - 36561141
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  36561201 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 36561141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 24968253 - 24967979
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24968253 caaagggtagatctcgggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctactc 24968154  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttgtatgcttgttagctc 211  Q
    ||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  24968153 tctccccaaaattaagccacattggctgaactgggtcaacaatcttgctcggtgtttgttcgttt-tcttttatcgtttatcttgtatgcttgttagctc 24968055  T
Q  212 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24968054 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 24967979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 2677026 - 2677301
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2677026 caaagggtagatctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 2677125  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttg-tatgcttgttagct 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| || |||||||||| ||||||||||||||    
T  2677126 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgtttgttcttttc-ttttcatggtttatcttgttatgcttgttagct 2677224  T
Q  211 cttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2677225 cttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgctctcatagat 2677301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 2672870 - 2673145
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2672870 caaagggtagatctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 2672969  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttg-tatgcttgttagct 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| || |||||||||| ||||||||||||||    
T  2672970 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgtttgttcttttc-ttttcatggtttatcttgttatgcttgttagct 2673068  T
Q  211 cttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  2673069 cttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttactctcatagat 2673145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 8512363 - 8512087
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||||||||||||||  || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8512363 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 8512264  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcg-tttatcttgtatgcttgttagc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |  ||||||| |||||||||||||||||||| |    
T  8512263 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcgttt-tcgtttatcgttttatcttgtatgcttgttaac 8512165  T
Q  210 tcttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  8512164 tcttagtgtggttgtgctacacattaggcttaggctgttttgttgttgttagcttggaagccatttgctctcatagat 8512087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 8517243 - 8516967
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||||||||||||||  || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8517243 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 8517144  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcg-tttatcttgtatgcttgttagc 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |  ||||||| |||||||||||||||||||| |    
T  8517143 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcgttt-tcgtttatcgttttatcttgtatgcttgttaac 8517045  T
Q  210 tcttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  8517044 tcttagtgtggttgtgctacacattaggcttaggctgttttgttgttgttagcttggaagccatttgctctcatagat 8516967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 32475629 - 32475356
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  32475629 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttt-gtaa-acattcacatattggattggagagctgctc 32475532  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatgcttgttagct 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| | |||||||||||||||||||||||||||||||    
T  32475531 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttt-tcttttatcgtttatcttgtatgcttgttagct 32475433  T
Q  211 cttagtgtggttttgctatacattaggcttaggctgttttgttgttg-ttagcttggaggccatttgcactcatagat 287  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  32475432 cttagtgtggatttgct-tacattaggcttaggctgttttgttgttgattagtttggaggccatttgcactcatagat 32475356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 32480487 - 32480214
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  32480487 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttt-gtaa-acattcacatattggattggagagctgctc 32480390  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatgcttgttagct 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||| ||| | |||||||||||||||||||||||||||||||    
T  32480389 tctcccccagattaggccacattggctgaactgggtcaacaatcttggttggtgttttgttcgttt-tcttttatcgtttatcttgtatgcttgttagct 32480291  T
Q  211 cttagtgtggttttgctatacattaggcttaggctgttttgttgttg-ttagcttggaggccatttgcactcatagat 287  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  32480290 cttagtgtggatttgct-tacattaggcttaggctgttttgttgttgattagtttggaggccatttgcactcatagat 32480214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 109 - 287
Target Start/End: Complemental strand, 10207983 - 10207805
Alignment:
Q  109 ctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttgt-atgcttgtta 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  || ||||||||||| ||||||||||    
T  10207983 ctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgtttgttcttttcttttc-atggtttatcttgttatgcttgtta 10207885  T
Q  208 gctcttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10207884 gctcttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 10207805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 12 - 276
Target Start/End: Complemental strand, 18656579 - 18656314
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  18656579 caaagggtagatctagggtttgttcatgtgtaaagcttgaat-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctc 18656482  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttt--tttatcgtttatcttgtatgc-ttgttag 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| || |||||| || | ||||||  |||| |||||||||||| ||| |||||||    
T  18656481 tctcccccagattaggccatattggctgaactgggtcaacaatcttgttcagtgttttttttgttctttcctttaccgtttatcttgtttgctttgttag 18656382  T
Q  209 ctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||| |||||||||| ||||||| || ||||| ||||||||||||||||||||||||||| |||||||    
T  18656381 ctctttgtgtggtttttctatacacta-gcttagggctgttttgttgttgttagcttggagaccatttg 18656314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 23 - 276
Target Start/End: Original strand, 22173146 - 22173397
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  22173146 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 22173243  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatctt-gtatgc-ttgttagctcttagtgt 218  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| |||||||||     ||||| || |||||||  | ||| ||| || ||||| ||||    
T  22173244 attaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---ccttttaccgcttatcttattttgctttggtatctctttgtgt 22173339  T
Q  219 ggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    |||||||||||||| ||| ||  |||||||||||||||||| |||||||| |||||||    
T  22173340 ggttttgctatacactagtctagggctgttttgttgttgtttgcttggagaccatttg 22173397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 23 - 168
Target Start/End: Original strand, 28503826 - 28503970
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga--ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccca 120  Q
    |||||||||| ||| |||||||||||||||  ||||||  |||||||||| |||||||||||| ||| |||||||||||||||||||||||||| |||||    
T  28503826 tctagggtttattcttgtgtaaagcttgaag-gctagagtttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctcttcccca 28503923  T
Q  121 gattaggccacattggctgaactgggtcaacaatcttgctcggtgttt 168  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  28503924 gattaggccatattggctgaactgggtcaacaatctt-ctcggtgttt 28503970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 23 - 259
Target Start/End: Complemental strand, 7167379 - 7167144
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagcta--gattcttgtaactcttttgtaacacattca-catattggattggagagctgctctctccccc 119  Q
    |||||||||||||| ||||||| |||||||  ||||  | |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||    
T  7167379 tctagggtttgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctccccc 7167283  T
Q  120 agattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttag 215  Q
    ||||||||||| |||||||||||||||||||||||||| || |||| ||||||| || |||| ||   | ||||||||  ||||| |||||| ||||| |    
T  7167282 agattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttc-ttcctttctt---gcttatcttgtttatgctttgttatctctttg 7167188  T
Q  216 tgtggttttgctatacattaggcttaggctgttttgttgttgtt 259  Q
    |||||||||||| |||| ||| ||  ||||||||||||||||||    
T  7167187 tgtggttttgctctacactagtctagggctgttttgttgttgtt 7167144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 61 - 276
Target Start/End: Original strand, 2671586 - 2671800
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgc 159  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  2671586 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-c 2671683  T
Q  160 tcggtg-tttgttcttttcttttttatcgtttatcttg-tatgc-ttgttagctcttagtgtggttttgctatacattaggcttaggctg-ttttgttgt 255  Q
    | |||| ||||||| || |||| ||   | |||||||| | ||| |||||| ||||| |||||||||| || |||| ||| ||  ||||| |||||||||    
T  2671684 ttggtgttttgttc-ttcctttctt---gcttatcttgttttgctttgttatctctttgtgtggtttttctctacactagactagggctgtttttgttgt 2671779  T
Q  256 tgttagcttggaggccatttg 276  Q
    |||| |||||||| |||||||    
T  2671780 tgtttgcttggagaccatttg 2671800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 8477459 - 8477363
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8477459 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 8477363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 8739063 - 8739159
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8739063 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 8739159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 9091301 - 9091397
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9091301 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 9091397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 40372795 - 40372891
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40372795 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 40372891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 18552872 - 18552971
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  18552872 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 18552971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 1736294 - 1736413
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| || ||||| | |||||||||||||||| |||    
T  1736294 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatattg 1736393  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  1736394 gt--gtgtttgttcctttcttt 1736413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 36029191 - 36029072
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||| |||||||||||||||| || ||||| | |||||||||||||||||| |    
T  36029191 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctttctcccccagattaggtcatattggacagaactgggtcaacaatctcg 36029092  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  36029091 gt--gtgtttgttcctttcttt 36029072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 26928591 - 26928687
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  26928591 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggctgaactgggtcaacaatctt 26928687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 8370476 - 8370573
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  8370476 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 8370573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 21711320 - 21711202
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||| ||||||| |||| |||| |||||| ||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  21711320 ttcttgtaactcttt-gtaacactttcatcatagtggatttgagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 21711222  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  21711221 gt--gtgtttgttcctttcttt 21711202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 27974942 - 27975039
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  27974942 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 27975039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 30709779 - 30709877
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||||||||||  |||| |||| |||||||||| ||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  30709779 ttcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 30709877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 1306045 - 1305949
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| | || ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  1306045 ttcttgtaacccttt-gtaacactttcatcgtagtggattggagagctgctatctcccctagattaggccatattggctgaactgggtcaacaatctt 1305949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 16264447 - 16264327
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||| |||||||||||||     
T  16264447 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatcttt 16264349  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  16264348 ttgtgtgtttgttcctttcttt 16264327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 178
Target Start/End: Complemental strand, 48438312 - 48438195
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||||| |||||| |||||||    
T  48438312 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaataatcttg 48438213  T
Q  159 ctcggtgtttgttcttttct 178  Q
     |  |||||||||| |||||    
T  48438212 gt--gtgtttgttcctttct 48438195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 3715991 - 3716090
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| | |||||||||||||||||||| || |||||||| || ||||| | ||||||||||||||||||||    
T  3715991 ttcttgtaactcttttgtaacactttcatcatagtagattggagagctgctctctctcctagattaggtcatattggaccgaactgggtcaacaatcttg 3716090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 40592771 - 40592870
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| | |||||||||||| ||||||||| ||||||||| || ||||| | ||||||||||||||||||||    
T  40592771 ttcttgtaactcttttgtaacactttcatcatagtcgattggagagcttctctctcccacagattaggtcatattggaccgaactgggtcaacaatcttg 40592870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 27986449 - 27986533
Alignment:
Q  75 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 27986533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 26299086 - 26298987
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| | |||||||| ||||||||||||||||||||| | || ||||  | ||||||||||||||||||||    
T  26299086 ttcttgtaactcttttgtaacactttcatcatagtagattggagggctgctctctcccccagattatgtcatattgaaccgaactgggtcaacaatcttg 26298987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 6794703 - 6794821
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||||| |||||| || ||||| |  ||| |||||||||||||||    
T  6794703 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattggacctaaccgggtcaacaatcttg 6794801  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  6794802 gt--gtgtttgttcctttcttt 6794821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 25795879 - 25795781
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| | || | |||||||||||||||||||||||||||||||| || ||||| | ||||| |||||||||||||    
T  25795879 ttcttgtaactctttcgtaacactttcatcttagtagattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 25795781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 28501659 - 28501750
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga--ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctct 114  Q
    |||||||||| ||| |||||||||||||||  ||||||  |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||    
T  28501659 tctagggtttattcttgtgtaaagcttgaag-gctagagtttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctct 28501750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 32143418 - 32143321
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||| |||||||||||||    
T  32143418 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 32143321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 33386669 - 33386753
Alignment:
Q  75 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||||| |||||||||||    
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaatctt 33386753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 47923895 - 47923994
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggct-gaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||| ||| |||| |||| | ||||| || |||||||||||||| |||||||| || ||||| | ||||||||||||||||||||    
T  47923895 ttcttgtaactcttttgtagcactttcatcatagtagattgaagggctgctctctcccctagattaggtcatattggatcgaactgggtcaacaatcttg 47923994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 27453055 - 27452958
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||||||| ||||||| || ||||| | ||||||| |||||||||||    
T  27453055 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccggattaggtcatattggaccgaactggatcaacaatctt 27452958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 40844749 - 40844651
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||| ||| |||||||||| |||||||||||| || ||||| | ||||||  ||||||||||||    
T  40844749 ttcttgtaactcttttgtaacactttcatcatagtggatttgagggctgctctct-ccccagattaggtcatattggaccgaactgaatcaacaatcttg 40844651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 24695153 - 24695272
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| ||||  ||||| ||| | |||||||||||  |||||||| || ||||| | ||||| ||||||||||||||    
T  24695153 ttcttgtaactcttttgtaacactttcatcatagcggattagagggttgctctctcccgtagattaggtcatattggaccgaactaggtcaacaatcttg 24695252  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  24695253 gt--gtgtttgttcatttcttt 24695272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 37466388 - 37466270
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||||| || ||||||| |||| | || |||||||||| ||| ||||||||||||||||||| || ||||| | |||||| |||||||||||||    
T  37466388 ttcttgtaactcatt-gtaacactttcatcttagtggattggagggctactctctcccccagattaggtcatattggaccgaactgtgtcaacaatcttg 37466290  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  37466289 gt--gtgtttgttcatttcttt 37466270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 1417513 - 1417578
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||| | ||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  1417513 tggattggagggatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 1417578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 4386947 - 4386983
Alignment:
Q  91 tattggattggagagctgctctctcccccagattagg 127  Q
    |||||||||||||||||||||||||||||||| ||||    
T  4386947 tattggattggagagctgctctctcccccagagtagg 4386983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 38210569 - 38210629
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||||||||||||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  38210569 tggattggagagctgctctctcccccatactaggtcagattggaccgaactgggtcaacaa 38210629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 39039995 - 39040079
Alignment:
Q  75 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||| |||| |||| |||||||||||| || ||||| |||||||||||| || ||||| | ||||| |||||||||||||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattggaccgaactaggtcaacaatctt 39040079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 50494198 - 50494258
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  50494198 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 50494258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 53894119 - 53894055
Alignment:
Q  90 atattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  53894119 atattggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 53894055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 3328346 - 3328444
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggc-tgaactgggtcaacaatcttg 158  Q
    |||||||||||| || ||||||| |||| | || ||||||| || |||||||||||| | |||||||| || |||||  |||||||||||||||||||||    
T  3328346 ttcttgtaactcatt-gtaacactttcatcttagtggattgaagggctgctctctcctctagattaggtcatattggaatgaactgggtcaacaatcttg 3328444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 28503995 - 28504052
Alignment:
Q  202 ttgttagctcttagtgtggttttgctatacattaggcttaggctgttttgttgttgtt 259  Q
    |||||| ||||| |||||||||||||||||| ||| |   ||||||||||||||||||    
T  28503995 ttgttatctctttgtgtggttttgctatacactagtcaagggctgttttgttgttgtt 28504052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 458483 - 458543
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  458483 tggattggagggctgctctctcccccagactaggtcaggttggaccgaactgggtcaacaa 458543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 6063504 - 6063444
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||| ||||    
T  6063504 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtccacaa 6063444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 10621588 - 10621528
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||  || ||||| | |||||||||||||||    
T  10621588 tggattggagggctgctctctcccccagactagctcagattggaccgaactgggtcaacaa 10621528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 39153405 - 39153357
Alignment:
Q  110 tctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  39153405 tctctcccccagattaggtcaagttggactgaactgggtcaacaatctt 39153357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 228; Significance: 1e-126; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 19104 - 19378
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||  || |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  19104 caaagggtagatctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacactcacatattgtattggagagctgctc 19203  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttgtatgcttgttagctc 211  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  19204 tctcccccagattaggccacaatggctgaactgggtcaacaatcttgctcggtgtttgttcgttt-tcttttatcgtttatcttgtatgcttgttagctc 19302  T
Q  212 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19303 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 19378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 14248 - 14523
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||||||||||||||  || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14248 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 14347  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatgcttgttagct 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| | |||||||||||||||||||||||||||||||    
T  14348 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttt-tcttttatcgtttatcttgtatgcttgttagct 14446  T
Q  211 cttagtgtggttttgctatacattaggcttaggctgttttgttgttg-ttagcttggaggccatttgcactcatagat 287  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14447 cttagtgtggatttgct-tacattaggcttaggctgttttgttgttgattagcttggaggccatttgcactcatagat 14523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 148895 - 149169
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| |||| |||||  || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  148895 caaagggtagatctatggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctactc 148994  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttgtatgcttgttagctc 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  |||||||||||||||||||||||||||||||    
T  148995 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcgttt-tcctttatcgtttatcttgtatgcttgttagctc 149093  T
Q  212 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  149094 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 149169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 12 - 283
Target Start/End: Original strand, 2190 - 2460
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| |||| |||||  || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  2190 caaagggtagatctatggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctactc 2289  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttgtatgcttgttagctc 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  |||||||||||||||||||||||||||||||    
T  2290 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcgttt-tcctttatcgtttatcttgtatgcttgttagctc 2388  T
Q  212 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcat 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2389 ttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcat 2460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 24261262 - 24261537
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||||||||||||||  || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24261262 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 24261361  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatgcttgttagct 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| | |||||||||||||||||||||||||||||||    
T  24261362 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttt-tcttttatcgtttatcttgtatgcttgttagct 24261460  T
Q  211 cttagtgtggttttgctatacattaggcttaggctgttttgttgttg-ttagcttggaggccatttgcactcatagat 287  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24261461 cttagtgtggatttgct-tacattaggcttaggctgttttgttgttgattagcttggaggccatttgcactcatagat 24261537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 24266141 - 24266416
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||||||||||||||  || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24266141 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 24266240  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatgcttgttagct 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| |  ||||||||||||||||||||||||||||||    
T  24266241 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttt-tcctttatcgtttatcttgtatgcttgttagct 24266339  T
Q  211 cttagtgtggttttgctatacattaggcttaggctgttttgttgttg-ttagcttggaggccatttgcactcatagat 287  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24266340 cttagtgtggatttgct-tacattaggcttaggctgttttgttgttgattagcttggaggccatttgcactcatagat 24266416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 16880218 - 16879944
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  16880218 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttt-gtaaaacattcacatattggattggagagctgctc 16880120  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatgcttgttagct 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| | |||||||||||||||||||||||||||||||    
T  16880119 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttt-tcttttatcgtttatcttgtatgcttgttagct 16880021  T
Q  211 cttagtgtggttttgctatacattaggcttaggctgttttgttgttg-ttagcttggaggccatttgcactcatagat 287  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16880020 cttagtgtggatttgct-tacattaggcttaggctgttttgttgttgattagcttggaggccatttgcactcatagat 16879944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 12 - 287
Target Start/End: Complemental strand, 16885074 - 16884800
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  16885074 caaagggtaggtctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttt-gtaaaacattcacatattggattggagagctgctc 16884976  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatgcttgttagct 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| | |||||||||||||||||||||||||||||||    
T  16884975 tctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttt-tcttttatcgtttatcttgtatgcttgttagct 16884877  T
Q  211 cttagtgtggttttgctatacattaggcttaggctgttttgttgttg-ttagcttggaggccatttgcactcatagat 287  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16884876 cttagtgtggatttgct-tacattaggcttaggctgttttgttgttgattagcttggaggccatttgcactcatagat 16884800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 12 - 276
Target Start/End: Complemental strand, 19992458 - 19992195
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  19992458 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctc 19992360  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgttag 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |  ||||| |||||||||||  ||||||||||||    
T  19992359 tctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttcc--ttttaccgtttatcttgtttatgcttgttag 19992262  T
Q  209 ctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||| |||||||||||||||||| || ||||| ||||| ||||||||||| |||||||| ||||||||    
T  19992261 ctctttgtgtggttttgctatacacta-gcttagggctg-tttgttgttgtaagcttggaagccatttg 19992195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 21812178 - 21812452
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagctt-gaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgct 110  Q
    |||||||||| ||||||||||||||||||||||||||| || |||||||| ||||| ||| ||||||||| || |||||||||||||||||| |||||||    
T  21812178 caaagggtagatctagggtttgttcatgtgtaaagctttgacaagctagagtcttggaac-cttttgtaagac-ttcacatattggattggaaagctgct 21812275  T
Q  111 ctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgtta 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||||  |||||||||||    
T  21812276 ctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttttc--ttttaccgtttatcttgtttatgcttgtta 21812373  T
Q  208 gctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
     ||||| |||||||||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||| |||||||||    
T  21812374 actctttgtgtggttttgctatacacta-gcttagggctg-tttgttgttgttagcttggaagccatttgctctcatagat 21812452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 23 - 276
Target Start/End: Original strand, 24024278 - 24024530
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 122  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  24024278 tctagggtttgttcatgtgtaaagcttgaag-gctagagtcttgtaaca-ttttgtaacactttctcatattggattggagagctgctctctcccccaga 24024375  T
Q  123 ttaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttttttatcgtttatcttg--tatgcttgttagctcttagtgtgg 220  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||| || || |   |||| | | ||||||||  ||||||||||||||||| ||||||    
T  24024376 ttaggccatattggctgaactgggtcaacaatcttgttcggtgttt-ttgttcttccttttcttgcttatcttgtttatgcttgttagctctttgtgtgg 24024474  T
Q  221 ttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    |||||||||| | ||| | |||||||||||||||||||| |||||||| |||||||    
T  24024475 ttttgctatatactagtcataggctgttttgttgttgtttgcttggagaccatttg 24024530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 23 - 276
Target Start/End: Complemental strand, 12406465 - 12406214
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||  ||||||||||||    
T  12406465 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctattctctcccccag 12406368  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg-tatgc-ttgttagctcttagtgt 218  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| |||||||||   | ||||| || |||||||| | ||| ||| || ||||| ||||    
T  12406367 attaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---tcttttaccgcttatcttgttttgctttggtatctctttgtgt 12406272  T
Q  219 ggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    |||||||||||||| ||| ||  ||||| |||||||||||| |||||||| |||||||    
T  12406271 ggttttgctatacactagtctagggctgctttgttgttgtttgcttggagaccatttg 12406214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 23 - 276
Target Start/End: Complemental strand, 12397045 - 12396794
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    |||||||||||||||||||||||| || ||| |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  12397045 tctagggtttgttcatgtgtaaagatt-aaaggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgttctctcccccag 12396948  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg-tatgc-ttgttagctcttagtgt 218  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| |||||||||  |   |||| || |||||||| | ||| ||| || ||||| ||||    
T  12396947 attaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttccc---tttaccgcttatcttgttttgctttggtatctctttgtgt 12396852  T
Q  219 ggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    |||||||||||||| ||| ||  ||||| |||||||||||| |||||||| |||||||    
T  12396851 ggttttgctatacactagtctagggctgctttgttgttgtttgcttggagaccatttg 12396794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 23 - 276
Target Start/End: Original strand, 31109535 - 31109785
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 122  Q
    ||||||||||||||||||| ||||||||||  |||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| |||    
T  31109535 tctagggtttgttcatgtgcaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccctaga 31109632  T
Q  123 ttaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagtgt 218  Q
    |||||||| ||||||||||||||||||||||||||| |||||| |||||||||     |||| | ||||||||||  ||||| |||  | ||||| ||||    
T  31109633 ttaggccatattggctgaactgggtcaacaatcttgttcggtgttttgttctt---ccttttcttgtttatcttgtttatgctttggaatctctt-gtgt 31109728  T
Q  219 ggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttg 276  Q
    |||||||||||||| |||  ||| |||||||||||||||||| |||||||| |||||||    
T  31109729 ggttttgctatacactag--ttagggctgttttgttgttgttggcttggagaccatttg 31109785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 23 - 276
Target Start/End: Original strand, 20357509 - 20357761
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagcta--gattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccca 120  Q
    |||||||  ||||| |||||||||||||||  ||||  | |||||||||| |||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  20357509 tctagggcatgttcttgtgtaaagcttgaag-gctattgtttcttgtaacccttt-gtaacactttctcatattggattggagagctgctctctccccca 20357606  T
Q  121 gattaggccacattggctgaactgggtcaacaatcttgctcggt-gtttgttcttttcttttttatcgtttatcttgtatgc-ttgttagctcttagtgt 218  Q
     ||||||||| |||||||||||||||||||||||||| || |||  |||||||||     |||| | | ||||||||| ||| |||||| ||||| ||||    
T  20357607 aattaggccatattggctgaactgggtcaacaatctt-cttggtattttgttctt---ccttttcttgcttatcttgtttgctttgttatctctttgtgt 20357702  T
Q  219 ggttttgctatacattaggcttaggctg-ttttgttgttgttagcttggaggccatttg 276  Q
    ||||||||| |||| ||| ||  ||||| |||||||||||||||||||||| |||||||    
T  20357703 ggttttgctctacactagtctagggctgtttttgttgttgttagcttggagaccatttg 20357761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 72 - 276
Target Start/End: Complemental strand, 4866816 - 4866612
Alignment:
Q  72 cttttgtaacacattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgt 170  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  4866816 cttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgt 4866718  T
Q  171 tcttttcttttttatcgtttatcttg-tatgc-ttgttagctcttagtgtgg-ttttgctatacattaggcttaggctgttttgttgttgttagcttgga 267  Q
    ||||     ||||| || |||||||| | ||| ||| || || || |||||| |||||||||||| ||| ||  | |||||||||||||||| |||||||    
T  4866717 tctt---ccttttaccgcttatcttgttttgctttggtatctttttgtgtggtttttgctatacactagtctaggactgttttgttgttgtttgcttgga 4866621  T
Q  268 ggccatttg 276  Q
    | |||||||    
T  4866620 gaccatttg 4866612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 2058062 - 2057966
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2058062 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 2057966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 1533444 - 1533540
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1533444 ttcttgtaacccttt-gtaacactttcatcatattggattggagagatgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 1533540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 18408860 - 18408764
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18408860 ttcttgtaacccttt-gtaacactttcatcatactggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 18408764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 21639905 - 21639809
Alignment:
Q  61 ttcttgtaactcttttgtaacacattcac-atattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| ||||  ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21639905 ttcttgtaacccttt-gtaacactttcattatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 21639809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 29159901 - 29159802
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||| |||||||| || ||||| | ||||||||||||||||||||    
T  29159901 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatcttg 29159802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 46516309 - 46516428
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||||| |||||||| || ||||| | ||||||||||||||||||||    
T  46516309 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatcttg 46516408  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  46516409 gt--gtgtttgttcctttcttt 46516428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 18413736 - 18413641
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  18413736 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccc-agattaggccatattggctgaactgggtcaacaatctt 18413641  T

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Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 21646103 - 21646007
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| ||||| |||||| |||| |||| ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  21646103 ttcttgtaaccctttt-taacactttcatcatagtggattggagagctgctctcttccctagattaggccatattggctgaactgggtcaacaatctt 21646007  T

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Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 49091759 - 49091660
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||| |||||||| |||||||||||| || ||||| || |||||||||||||||||||    
T  49091759 ttcttgtaactcttttgtaacactttcatcatagtggattggagagttgctctcttccccagattaggtcatattggactaaactgggtcaacaatcttg 49091660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 2647695 - 2647814
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacatt-ggctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||||||||| |||| || ||| ||| ||| ||||||||||||||||    
T  2647695 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagaataggtcatattgggccgaattgggtcaacaatcttg 2647794  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  2647795 at--gtgtttgttcctttcttt 2647814  T

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Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 21983383 - 21983285
Alignment:
Q  61 ttcttgtaactctttt-gtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatct 156  Q
    |||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||    
T  21983383 ttcttgtaactctttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatct 21983285  T

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Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 33332449 - 33332568
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggct-gaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| | || |||||||||| ||||||||||||||||||||||| || ||| | | ||||||||||||||||||||    
T  33332449 ttcttgtaactcttttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaatcttg 33332548  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  33332549 gt--gtgtttgttcctttcttt 33332568  T

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Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 56045 - 55947
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| |||||||||| |||||||||||| || ||||| | |||||||||||| |||||||    
T  56045 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagattaggtcatattggaccgaactgggtcaataatcttg 55947  T

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Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 44848684 - 44848781
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||| ||||| || ||||  | |||||||||||||||||||    
T  44848684 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccaggttaggtcatattgaaccgaactgggtcaacaatctt 44848781  T

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Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 20284153 - 20284068
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttgctcggtgtttgttcttttcttt 180  Q
    |||||||||| ||||||||||||||||||||||| || ||||| | |||||||||||||||||||| |  |||||||||| |||||||    
T  20284153 tggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggt--gtgtttgttcctttcttt 20284068  T

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Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 9190008 - 9190106
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||||| || ||||||| |||| | || ||||||||||||||||||||||||||||| |||| || ||||| | ||||||||||||||||||||    
T  9190008 ttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattggaccgaactgggtcaacaatcttg 9190106  T

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Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 2580487 - 2580366
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||||| || ||||||| |||| | || ||||||||||||||||||||||||||||| |||| || ||||| | ||| ||||||||||||||||    
T  2580487 ttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattggaccgaattgggtcaacaatcttg 2580389  T
Q  159 ctcggtgtttgttcttttctttttt 183  Q
     |  |||||||||| | ||||||||    
T  2580388 gt--gtgtttgttcctctctttttt 2580366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 4796666 - 4796783
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||  |||| |||| |||||| ||| |||||| |||||||||||||||| ||  |||| | ||||||||| ||||||||||    
T  4796666 ttcttgtaactcttttgtaacaatttcatcatagtggatttgagggctgctttctcccccagattaggtcattttggaccgaactgggttaacaatcttg 4796765  T
Q  159 ctcggtgtttgttcttttct 178  Q
     |  |||||||||| |||||    
T  4796766 gt--gtgtttgttcctttct 4796783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 35960914 - 35960815
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatcttg 158  Q
    ||||| |||||| |||||||||| |||| |||| ||| |||||| ||||||||||||||||||||||| || ||||  | ||||| ||||||||||||||    
T  35960914 ttcttctaactcatttgtaacactttcatcatagtggtttggagggctgctctctcccccagattaggtcatattgaaccgaactcggtcaacaatcttg 35960815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 9185198 - 9185263
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||||||| |||||||||||||| ||||  | ||||| | ||||||||||||||||||||    
T  9185198 tggattggagagcttctctctcccccagactaggttatattggaccgaactgggtcaacaatcttg 9185263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 28617258 - 28617319
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaat 154  Q
    ||||||||||||||||||||||||||||| |||| || ||||| | ||||||||| ||||||    
T  28617258 tggattggagagctgctctctcccccagagtaggtcatattggaccgaactgggtaaacaat 28617319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 31155971 - 31155911
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31155971 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31155911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 21989005 - 21988909
Alignment:
Q  61 ttcttgtaactctttt-gtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatct 156  Q
    |||||||||||||||| ||||||| |||| || | |||||||||||| |||||||  | |||||||||| || ||||| | ||||||||||||||||||    
T  21989005 ttcttgtaactctttttgtaacactttcatcaaagtggattggagagttgctctc--ctccagattaggtcatattggaccgaactgggtcaacaatct 21988909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 2479433 - 2479337
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||| ||||||||| ||||||| |||| |||| |||||| ||||||||||||| |||| |||||||| || ||||  | |||||||||||||||||||    
T  2479433 ttcttataactcttt-gtaacactttcatcatagtggatttgagagctgctctc-cccctagattaggtcatattgaaccgaactgggtcaacaatctt 2479337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 47263745 - 47263678
Alignment:
Q  89 catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    |||| ||||||||||||||||  ||||||||| |||||| || ||||| | |||||||||||||||||||    
T  47263745 catagtggattggagagctgc--tctcccccatattaggtcatattggaccgaactgggtcaacaatctt 47263678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 1049356 - 1049296
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  1049356 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 1049296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 2935497 - 2935557
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  2935497 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 2935557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 3035953 - 3036013
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  3035953 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 3036013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 7351712 - 7351652
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  7351712 tggattggagggctgctctctcccccatactaggtcagattggaccgaactgggtcaacaa 7351652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 8153466 - 8153514
Alignment:
Q  110 tctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  8153466 tctctcccccagattaggtcaagttggactgaactgggtcaacaatctt 8153514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 9027254 - 9027194
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  9027254 tggataggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9027194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 22108295 - 22108355
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22108295 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22108355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 22137306 - 22137366
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22137306 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22137366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 40550055 - 40550115
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  40550055 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 40550115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 40552333 - 40552393
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  40552333 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 40552393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 43988401 - 43988679
Alignment:
Q  12 caaagggtaggtctagggtttgtt--catgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgc 109  Q
    |||||||||| |||||||||| ||  | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43988401 caaagggtagatctagggttttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgc 43988500  T
Q  110 tctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcg-tttatcttgtatgcttgtta 207  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||| || | ||||||||||||||||||||    
T  43988501 tctctcccccagattaggccacattggctgaactgggtaaacaatcttgcttggtgttttgttcttttc-ttttcatggttttatcttgtatgcttgtta 43988599  T
Q  208 gctcttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  43988600 gctcttagtgtggttgtgctatacattaggcttaggctgttttgttgttgttagcttggaagccatttgctctcatagat 43988679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 12 - 276
Target Start/End: Complemental strand, 39445644 - 39445382
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  39445644 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 39445547  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgttag 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |  ||||| |||||||||||  ||||||||||||    
T  39445546 tctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttcc--ttttaccgtttatcttgtttatgcttgttag 39445449  T
Q  209 ctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||| |||||||||||||||||| || ||||| ||||| |||||||||||| ||||||| ||||||||    
T  39445448 ctctttgtgtggttttgctatacacta-gcttagggctg-tttgttgttgtttgcttggaagccatttg 39445382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 12 - 276
Target Start/End: Original strand, 25445029 - 25445292
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  25445029 caaagggtagctctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctc 25445127  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgttag 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |  ||||| |||||||||||  || |||||||||    
T  25445128 tctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttcc--ttttaccgtttatcttgtttacgcttgttag 25445225  T
Q  209 ctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||| |||||||||||||||||| || ||||| ||||| |||||||||||| ||||||| ||||||||    
T  25445226 ctctttgtgtggttttgctatacacta-gcttagggctg-tttgttgttgtttgcttggaagccatttg 25445292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 12 - 276
Target Start/End: Original strand, 44023814 - 44024075
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  44023814 caaagggtagttctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 44023911  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgttag 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |   |||| | |||||||||  ||||||||||||    
T  44023912 tctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttcc---tttaccatttatcttgtttatgcttgttag 44024008  T
Q  209 ctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||| |||||||||||||||||| || ||||| ||||| |||||||||||| ||||||| ||||||||    
T  44024009 ctctttgtgtggttttgctatacacta-gcttagggctg-tttgttgttgtttgcttggaagccatttg 44024075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 12 - 276
Target Start/End: Original strand, 1054952 - 1055214
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||| |||||    
T  1054952 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagttgctc 1055049  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgttag 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |  ||||| |||||||||||  ||||||||||||    
T  1055050 tctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttcc--ttttaccgtttatcttgtttatgcttgttag 1055147  T
Q  209 ctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||| |||||||||||||||||| || ||||| ||||| ||||||||||| |||||||| | ||||||    
T  1055148 ctctttgtgtggttttgctatacacta-gcttagggctg-tttgttgttgtaagcttggaagacatttg 1055214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 23 - 168
Target Start/End: Complemental strand, 41398369 - 41398227
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 122  Q
    ||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  41398369 tctagggtttgttcatgtgtaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 41398272  T
Q  123 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttt 168  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||||    
T  41398271 ttaggccatattggctgacctgggtcaacaatctt-ctcggtgttt 41398227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 41390714 - 41390582
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 122  Q
    ||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  41390714 tctagggtttgttcatgtgtaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 41390617  T
Q  123 ttaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||| ||||||||| ||||||||||||||||    
T  41390616 ttaggccatattggctgatctgggtcaacaatctt 41390582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 23 - 259
Target Start/End: Original strand, 24787326 - 24787559
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagcta--gattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccca 120  Q
    |||||| ||||||| ||||||| |||||||  ||||  | |||||||||| |||| ||||||| ||| ||||||||||||||||||||||||| ||||||    
T  24787326 tctaggatttgttcttgtgtaatgcttgaag-gctattgtttcttgtaacccttt-gtaacactttctcatattggattggagagctgctctccccccca 24787423  T
Q  121 gattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatgc-ttgttagctcttagtgt 218  Q
    |||||||||| |||||||||||||||||||||||||| || |||| |||||||||     |||| | | ||||||||| ||| |||||| ||||| ||||    
T  24787424 gattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttctt---ccttttcttgcttatcttgtttgctttgttatctctttgtgt 24787519  T
Q  219 ggttttgctatacattaggcttaggctgttttgttgttgtt 259  Q
    ||||||||| ||||| || ||  ||||||||| ||||||||    
T  24787520 ggttttgctctacataagtctagggctgtttt-ttgttgtt 24787559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 24202769 - 24202865
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24202769 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 24202865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 47703935 - 47704034
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  47703935 ttcttgtaattcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 47704034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 19073026 - 19072928
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||||||||||| |||| | || |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  19073026 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 19072928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 19120916 - 19120818
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||||||||||| |||| | || |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  19120916 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 19120818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 16124515 - 16124614
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| || ||||| | |||||| |||||||||||||    
T  16124515 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgagtcaacaatcttg 16124614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 27104371 - 27104470
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||  | ||||| | |||||| |||||||||||||    
T  27104371 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaactgtgtcaacaatcttg 27104470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 9476359 - 9476240
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||| |||||||||||||| || |||| |||| ||||||||||||||||||||||||| |||||||| || ||||| | ||||||||||||||||||||    
T  9476359 ttcttataactcttttgtaatactttcatcatagtggattggagagctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatcttg 9476260  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  9476259 gt--gtgtttgttcctttcttt 9476240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 13598496 - 13598377
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||| |||||||||||||| |||| |||| ||||||| || ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  13598496 ttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 13598397  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  13598396 gt--gtgtttgttcctttcttt 13598377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 26644897 - 26644994
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  26644897 ttcttgtaactcttt-gtaacactttcatcataatggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 26644994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 29651909 - 29651790
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| || ||||| | |||||||||||| |||||||    
T  29651909 ttcttgtaattcttttgtaacactttcatcatagtggattggagtgctgctctctcccccagattaggtcatattggaccgaactgggtcaaaaatcttg 29651810  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  29651809 gt--gtgtttgttcctttcttt 29651790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 19358843 - 19358939
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||| |||||| || |||| |||||||||||||||||||||    
T  19358843 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatctt 19358939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 19361432 - 19361528
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||| |||||| || |||| |||||||||||||||||||||    
T  19361432 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatctt 19361528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 19380072 - 19380168
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||| |||||| || |||| |||||||||||||||||||||    
T  19380072 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatctt 19380168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 3281805 - 3281708
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||  |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||| ||||||    
T  3281805 ttcttgtaactcttt-gtaacactttcatcatcgtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaataatctt 3281708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 775759 - 775651
Alignment:
Q  72 cttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttgctcggtgtttg 169  Q
    |||||||||||| |||| | || |||||||||||||| ||||||||||||||||||| || ||||| | ||| |||||||||||||||| |  |||||||    
T  775759 cttttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatcttgat--gtgtttg 775662  T
Q  170 ttcttttcttt 180  Q
    ||| |||||||    
T  775661 ttcctttcttt 775651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 37069864 - 37069770
Alignment:
Q  64 ttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    |||||||||||| ||||||| |||| |||| ||||| |||||| ||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  37069864 ttgtaactcttt-gtaacactttcatcatagtggatcggagagatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 37069770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 47098824 - 47098942
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||||| || ||||||| |||| | || |||||||||| |||||||||||||||||||| || || ||||| | ||||||||||||||||||||    
T  47098824 ttcttgtaactcatt-gtaacactttcatcttagtggattggagggctgctctctcccccagattcggtcatattggaccgaactgggtcaacaatcttg 47098922  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  47098923 gt--gtgtttgttcctttcttt 47098942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 21536569 - 21536635
Alignment:
Q  61 ttcttgtaactcttttgtaacacattcac-atattggattggagagctgctctctcccccagattagg 127  Q
    ||||||||||||||| ||||||| ||||  ||| ||||||||||||||||||||||||||||||||||    
T  21536569 ttcttgtaactcttt-gtaacactttcattatagtggattggagagctgctctctcccccagattagg 21536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 13604623 - 13604720
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||  |||| |||| ||||||||||||||||||||||||||| |||||| || ||||  |  ||||||||||||||||||    
T  13604623 ttcttgtaactcttt-gtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattgaacctaactgggtcaacaatctt 13604720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 25439836 - 25439882
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagcta 58  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||    
T  25439836 caaagggtagctctagggtttgttcatgtgtaaagcttgataagcta 25439882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 9459479 - 9459419
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  9459479 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9459419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 9463306 - 9463246
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  9463306 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9463246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 16226386 - 16226446
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  16226386 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16226446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 180
Target Start/End: Original strand, 47102874 - 47102959
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttgctcggtgtttgttcttttcttt 180  Q
    |||||||||  |||||||||||||| |||||||| || ||||| | |||||||||||||||| ||| |  |||||||||| |||||||    
T  47102874 tggattggatggctgctctctcccctagattaggtcatattggaccgaactgggtcaacaattttggt--gtgtttgttcctttcttt 47102959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 32889536 - 32889438
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||||||| || ||||||| |||| | || ||||||||||||||||||| ||||||||| |||| || ||||| | ||||| | ||||||||||||    
T  32889536 ttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctatcccccagactaggtcatattggaccgaactagatcaacaatcttg 32889438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 23786058 - 23786118
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  23786058 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 23786118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 51752582 - 51752642
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  51752582 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 51752642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 82 - 287
Target Start/End: Original strand, 181973 - 182178
Alignment:
Q  82 acattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttt 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| | |    
T  181973 acattcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttt-tct 182071  T
Q  181 tttatcgtttatcttgtatgcttgttagctcttagtgtggttttgctatacattaggcttaggctgttttgttgttg-ttagcttggaggccatttgcac 279  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  182072 tttatcgtttatcttgtatgcttgttagctcttagtgtggatttgct-tacattaggcttaggctgttttgttgttgattagcttggaggccatttgcac 182170  T
Q  280 tcatagat 287  Q
    ||||||||    
T  182171 tcatagat 182178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 12 - 276
Target Start/End: Complemental strand, 507 - 245
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  507 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 410  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgttag 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |  ||||| |||||||||||  ||||||||||||    
T  409 tctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttcc--ttttaccgtttatcttgtttatgcttgttag 312  T
Q  209 ctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||| |||||||||||||||||| || ||||| ||||| |||||||||||| ||||||| ||||||||    
T  311 ctctttgtgtggttttgctatacacta-gcttagggctg-tttgttgttgtttgcttggaagccatttg 245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 1e-84; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 12 - 276
Target Start/End: Complemental strand, 18855871 - 18855609
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  18855871 caaagggtagttctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaac-cttttgtaacac-ttcacatattggattggagagctgctc 18855774  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgttag 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |  ||||| |||||||||||  ||||||||||||    
T  18855773 tctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttcc--ttttaccgtttatcttgtttatgcttgttag 18855676  T
Q  209 ctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||| |||||||||||||||||| || ||||| ||||| |||||||||||| ||||||| ||||||||    
T  18855675 ctctttgtgtggttttgctatacacta-gcttagggctg-tttgttgttgtttgcttggaagccatttg 18855609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 12 - 276
Target Start/End: Complemental strand, 5732809 - 5732544
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  5732809 caaagggtagatctagggtttgttcatgtgtaaagcttgaaa-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctc 5732712  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtgtttgttcttttcttt--tttatcgtttatcttgtatgc-ttgttag 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| || |||||| || | ||||||  |||| |||||||||||| ||| |||||||    
T  5732711 tctcccccagattaggccatattggctgaactgggtcaacaatcttgttcagtgttttttttgttctttcctttaccgtttatcttgtttgctttgttag 5732612  T
Q  209 ctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||| |||||||||| ||||||| || ||||| ||||||||||||||||||||||||||| |||||||    
T  5732611 ctctttgtgtggttttactatacacta-gcttagggctgttttgttgttgttagcttggagaccatttg 5732544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 283
Target Start/End: Complemental strand, 3814168 - 3813899
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  3814168 caaagggtagatctagggtttgttcatgtgtaaagcttgaaa-gctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctc 3814071  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgttag 208  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  |||| ||||||| || |||| ||   | ||||||||  ||||||||||||    
T  3814070 tctcccccagattaggccatattggctgaactgggtcaacaatcttgcatggtgttttgttc-ttcctttctt---gcttatcttgtttatgcttgttag 3813975  T
Q  209 ctcttagtgtgg-ttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcat 283  Q
    ||||| |||||| |||||| ||||| ||| ||  | |||||||||||||||| |||||||| |||||||| |||||    
T  3813974 ctctttgtgtggtttttgcgatacactagtctaggactgttttgttgttgtttgcttggagaccatttgctctcat 3813899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 12 - 276
Target Start/End: Original strand, 9224346 - 9224609
Alignment:
Q  12 caaagggtag-gtctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgc 109  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||| ||||| |||| |||||||||||| ||| |||||||||||||||||||||    
T  9224346 caaagggtagagtctagggtttgttcatgtgtaaagcttgaag-gctagagttcttctaac-cttttgtaacactttctcatattggattggagagctgc 9224443  T
Q  110 tctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg-tatgc-ttgtt 206  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||     ||||| || |||||||| | ||| ||| |    
T  9224444 tctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctt---ccttttaccgcttatcttgttttgctttggt 9224539  T
Q  207 agctcttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    | ||||| |||||||||||||||||| ||| ||  |||||||||||||||||| |||||||| |||||||    
T  9224540 atctctttgtgtggttttgctatacactagtctagggctgttttgttgttgtttgcttggagaccatttg 9224609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 12 - 276
Target Start/End: Original strand, 9229133 - 9229396
Alignment:
Q  12 caaagggtag-gtctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgc 109  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||| ||||| |||| |||||||||||| ||| |||||||||||||||||||||    
T  9229133 caaagggtagagtctagggtttgttcatgtgtaaagcttgaag-gctagagttcttctaac-cttttgtaacactttctcatattggattggagagctgc 9229230  T
Q  110 tctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg-tatgc-ttgtt 206  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||| |||||||||     ||||| || |||||||| | ||| ||| |    
T  9229231 tctctcccccagattaggccatattggctgaactgggttaacaatctt-ctcggtgttttgttctt---ccttttaccgcttatcttgttttgctttggt 9229326  T
Q  207 agctcttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    | ||||| |||||||||||||||||| ||| ||  |||||||||||||||||| |||||||| |||||||    
T  9229327 atctctttgtgtggttttgctatacactagtctagggctgttttgttgttgtttgcttggagaccatttg 9229396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 23 - 287
Target Start/End: Original strand, 45357248 - 45357510
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 122  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  45357248 tctagggtttgttcatgtgtaaagcttgaaa-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 45357345  T
Q  123 ttaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatg---cttgttagctcttagtgt 218  Q
    ||| |||| |||||||||||||||||||||||||| ||||||| |||||||||| |  ||||| || ||||||||| ||    |||  | ||||| ||||    
T  45357346 ttatgccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctttcc--ttttaccgcttatcttgtttgtgctttggaatctctt-gtgt 45357441  T
Q  219 ggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    ||||||||| |||| ||| ||  | |||||||||||||||||||||| || |||||||  |||||||||    
T  45357442 ggttttgctttacactagtctaggactgttttgttgttgttagcttgaagaccatttgttctcatagat 45357510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 23 - 276
Target Start/End: Complemental strand, 51520591 - 51520339
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  51520591 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 51520494  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagtg 217  Q
    ||||||||| |||||| ||||||||||||||||||| ||||||| |||||||||     |||||||  ||||||||  ||||| |||||| ||||| ||     
T  51520493 attaggccatattggcagaactgggtcaacaatctt-ctcggtgttttgttctt---ccttttatcacttatcttgtttatgctttgttatctctttgta 51520398  T
Q  218 tggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    ||||||||||||||| ||| ||  ||||| |||||||||||| |||||||| |||||||    
T  51520397 tggttttgctatacactagtctagggctgctttgttgttgtttgcttggagaccatttg 51520339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 25 - 268
Target Start/End: Original strand, 56146664 - 56146906
Alignment:
Q  25 tagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 123  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  56146664 tagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccagat 56146761  T
Q  124 taggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgc-ttgttagctcttagtgtg 219  Q
    ||||||| ||||||||||||||  |||||||||| ||||||| |||||||||     |||||||  ||||||||  ||||| |||||| ||||| |||||    
T  56146762 taggccatattggctgaactggaccaacaatctt-ctcggtgttttgttctt---ccttttatcacttatcttgtttatgctttgttatctctttgtgtg 56146857  T
Q  220 gttttgctatacattaggcttaggctgttttgttgttgttagcttggag 268  Q
    ||||||||||||| ||| ||  ||||| |||||||||||| ||||||||    
T  56146858 gttttgctatacactagtctagggctgctttgttgttgtttgcttggag 56146906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 23 - 287
Target Start/End: Original strand, 45347768 - 45348031
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagctagat-tcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 121  Q
    ||||||||||||||||||||||||||||||  ||||||  ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  45347768 tctagggtttgttcatgtgtaaagcttgaag-gctagaggtcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 45347865  T
Q  122 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttgtatg---cttgttagctcttagtg 217  Q
    |||| |||| |||||||||||||||||||||||||| ||||||| |||||||||| |  ||||| || ||||||||| ||    |||  | ||||| |||    
T  45347866 attaagccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctttcc--ttttaccgcttatcttgtttgtgctttggaatctctt-gtg 45347961  T
Q  218 tggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttgcactcatagat 287  Q
    |||||||||| |||| ||| ||  | |||||||||||||||||||||| || |||||||  |||||||||    
T  45347962 tggttttgctttacactagtctaggactgttttgttgttgttagcttgaagaccatttgttctcatagat 45348031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 24742075 - 24741941
Alignment:
Q  23 tctagggtttgttcatgtgtaaagcttgaaaagcta--gattcttgtaactcttttgtaacacattca-catattggattggagagctgctctctccccc 119  Q
    |||||||||||||| ||||||| |||||||  ||||  | |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||    
T  24742075 tctagggtttgttcttgtgtaa-gcttgaag-gctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctccccc 24741979  T
Q  120 agattaggccacattggctgaactgggtcaacaatctt 157  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  24741978 agattaggccatattggctgaactgggtcaacaatctt 24741941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 29760738 - 29760642
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29760738 ttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 29760642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 10047477 - 10047358
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  10047477 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 10047378  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  10047377 gt--gtgtttgttcctttcttt 10047358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 39246092 - 39245973
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  39246092 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 39245993  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  39245992 gt--gtgtttgttcctttcttt 39245973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 38152438 - 38152557
Alignment:
Q  61 ttcttgtaactcttttgtaacacattcac-atattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||| ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||| | || ||||| | ||||||||||||||||||||    
T  38152438 ttcttataactcttttgtaacactttcaccatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttg 38152537  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  38152538 gt--gtgtttgttcctttcttt 38152557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 16623292 - 16623391
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| |||||||||| || ||||  | ||||||||||||||||||||    
T  16623292 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgaaccgaactgggtcaacaatcttg 16623391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 28468542 - 28468625
Alignment:
Q  75 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    ||||||||| |||| |||| ||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||    
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggctgaactgggtcaacaatctt 28468625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 36315229 - 36315347
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||| |||||    
T  36315229 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacattcttg 36315327  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  36315328 gt--gtgtttgttcctttcttt 36315347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 36329438 - 36329556
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||| |||||    
T  36329438 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacattcttg 36329536  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  36329537 gt--gtgtttgttcctttcttt 36329556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 3796518 - 3796616
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||||||||||| |||| |||| |||||| ||||| |||||||||||||| |||||| || ||||| | |||||||||||||||||||    
T  3796518 ttcttgtaactcttttgtaacactttcatcatagtggattagagagttgctctctcccccatattaggtcatattggacggaactgggtcaacaatctt 3796616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 5147775 - 5147656
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||| ||||||||||| |||| |||| |||| ||||||||||||| |||||||| |||||| || ||||| | |||||||||||||||||| |    
T  5147775 ttcttgtaactattttgtaacactttcatcataatggactggagagctgctccctcccccaaattaggtcatattggaccgaactgggtcaacaatctcg 5147676  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  5147675 gt--gtgtttgttcctttcttt 5147656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 5396671 - 5396768
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| | ||||| |||| |||| ||||||||||||||||||||||| |||||||||| || ||||| | |||||||||||||||||||    
T  5396671 ttcttgtaactcttt-gcaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggtcaacaatctt 5396768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 5143357 - 5143260
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatct 156  Q
    ||||||||| | ||||||||||| |||| |||| ||| |||||||||||||||||||||||||||||| || ||||| | ||||| ||||||||||||    
T  5143357 ttcttgtaaattttttgtaacactttcatcatagtgggttggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatct 5143260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 24333901 - 24333808
Alignment:
Q  67 taactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||||||||||||| |||||| || ||||| | |||||| || ||||||||||    
T  24333901 taactcttttgtaacacgttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgagttaacaatcttg 24333808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 180
Target Start/End: Original strand, 5269204 - 5269309
Alignment:
Q  75 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttgctcggtgtttgttc 172  Q
    ||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| || ||||| | ||||| |||||||||||||| |  ||||||||||    
T  5269204 ttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatcttgtt--gtgtttgttc 5269301  T
Q  173 ttttcttt 180  Q
     |||||||    
T  5269302 ctttcttt 5269309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 16630679 - 16630778
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||| ||||||| |||||||| | || ||||| | ||||| ||||||||| ||||    
T  16630679 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccagattatgtcatattggaccgaactaggtcaacaaccttg 16630778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 31985634 - 31985730
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||| |||||||||||| || ||||| | |||||||||||||||||||    
T  31985634 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggaccgaactgggtcaacaatctt 31985730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 3777646 - 3777528
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||| |||||||| | ||||||||  | ||||| | |||||||||||||||||| |    
T  3777646 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctactctctcctctagattaggttatattggaccgaactgggtcaacaatctcg 3777548  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  3777547 gt--gtgtttgttcctttcttt 3777528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 6743417 - 6743507
Alignment:
Q  64 ttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaaca 152  Q
    ||||| |||||||||||||| |||| |||| |||||||||| |||||||||||||  |||||||| || ||||| | ||||||||||||||    
T  6743417 ttgtagctcttttgtaacactttcatcatagtggattggagggctgctctctcccgtagattaggtcatattggaccgaactgggtcaaca 6743507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 16931849 - 16931789
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  16931849 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16931789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 16934203 - 16934143
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  16934203 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16934143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 22780433 - 22780373
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22780433 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 44599898 - 44599838
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  44599898 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 44599838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 54867281 - 54867163
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||| ||||| ||||||||||  |||| |||| | ||||| || |||||||||||||| ||| |||| || ||||| | ||||||||||||||||||||    
T  54867281 ttcttataactattttgtaacattttcatcatagttgattgaagggctgctctctcccc-agactaggtcatattggaccgaactgggtcaacaatcttg 54867183  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  54867182 gt--gtgtttgttcctttcttt 54867163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 158
Target Start/End: Original strand, 25862035 - 25862120
Alignment:
Q  75 ttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||| |||| |||| |||||||||| || ||||||| ||||| |||||| || ||||| | |||||| |||||||||||||    
T  25862035 ttgtaacactttcatcatagtggattggagggccgctctcttccccatattaggtcatattggaccgaactgagtcaacaatcttg 25862120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 5112335 - 5112275
Alignment:
Q  61 ttcttgtaactcttttgtaacacattcacat-attggattggagagctgctctctccccca 120  Q
    |||||||||| | |||||||||| |||| || | |||||||||||||||||||| ||||||    
T  5112335 ttcttgtaacccatttgtaacactttcatattagtggattggagagctgctctcaccccca 5112275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 6765117 - 6765177
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  6765117 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 6765177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 7941596 - 7941656
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  7941596 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 7941656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 18709224 - 18709164
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||||||||  ||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  18709224 tggattggaggactgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 18709164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 22782798 - 22782738
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | ||||||| |||||||    
T  22782798 tggattggagggctgctctctcccccagactaggtcagattggaccgaactggatcaacaa 22782738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 127; Significance: 1e-65; HSPs: 3)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 12 - 283
Target Start/End: Original strand, 9583 - 9849
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctc 111  Q
    |||||||||| ||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  9583 caaagggtagatctagggtttgttcatgtgtaaagcttgaag-gctagagtcttgtaac-cttttgtaacactttctcatattggattggagagctgctc 9680  T
Q  112 tctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg--tatgcttgttag 208  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| || |||| ||   | ||||||||  ||||||||||||    
T  9681 tctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttc-ttcctttctt---gcttatcttgtttatgcttgttag 9775  T
Q  209 ctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcat 283  Q
    ||||| |||||||||||||||| | || ||||| |||||||||||||||||| | |||||| |||||||| |||||    
T  9776 ctctt-gtgtggttttgctatatacta-gcttagggctgttttgttgttgtttggttggagaccatttgctctcat 9849  T

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Target: scaffold0355; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 3788 - 3845
Alignment:
Q  12 caaagggtaggtctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaac 70  Q
    |||||||||| |||||||||||||||||||||||||||| || |||||| |||||||||    
T  3788 caaagggtagatctagggtttgttcatgtgtaaagcttg-aaggctagagtcttgtaac 3845  T

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Target: scaffold0355; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 283
Target Start/End: Original strand, 13 - 96
Alignment:
Q  197 tatgcttgttagctcttagtgtggttttgctatacattaggctta-ggctgttttgttgttgttagcttggaggccatttgcactcat 283  Q
    |||||||||||||||   |||||||||||||||||| || ||||| ||||||||||||||||||  ||||||| |||||||| |||||    
T  13 tatgcttgttagctc---gtgtggttttgctatacacta-gcttagggctgttttgttgttgtttacttggagaccatttgctctcat 96  T

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Target: scaffold0135 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 12 - 276
Target Start/End: Original strand, 35001 - 35264
Alignment:
Q  12 caaagggtag-gtctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgc 109  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||| ||||| |||| |||||||||||| ||| |||||||||||||||||||||    
T  35001 caaagggtagagtctagggtttgttcatgtgtaaagcttgaag-gctagagttcttctaac-cttttgtaacactttctcatattggattggagagctgc 35098  T
Q  110 tctctcccccagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttcttttttatcgtttatcttg-tatgc-ttgtt 206  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||| |||||||||     ||||| || |||||||| | ||| ||| |    
T  35099 tctctcccccagattaggccatattggctgaactgggttaacaatctt-ctcggtgttttgttctt---ccttttaccgcttatcttgttttgctttggt 35194  T
Q  207 agctcttagtgtggttttgctatacattaggcttaggctgttttgttgttgttagcttggaggccatttg 276  Q
    | ||||| |||||||||||||||||| ||| ||  |||||||||||||||||| |||||||| |||||||    
T  35195 atctctttgtgtggttttgctatacactagtctagggctgttttgttgttgtttgcttggagaccatttg 35264  T

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Target: scaffold0188 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 17952 - 18048
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17952 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 18048  T

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Target: scaffold0188; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 24045 - 24141
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt 157  Q
    |||||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24045 ttcttgtaacccttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 24141  T

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Target: scaffold0140 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 8419 - 8516
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||||||||    
T  8419 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 8516  T

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Target: scaffold0140; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 22343 - 22403
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22343 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 24618 - 24678
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  24618 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 24678  T

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Target: scaffold0036 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 85780 - 85662
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||| ||||||| |||| |||  ||||||||||||| |||||||||||||||||||| || ||||| |||||||||||||||||||| |    
T  85780 ttcttgtaactcttt-gtaacactttcatcatggtggattggagagccgctctctcccccagattaggtcatattggactgaactgggtcaacaatctag 85682  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  ||||||||||||||||||    
T  85681 at--gtgtttgttcttttcttt 85662  T

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Target: scaffold0006 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 5781 - 5662
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    |||||||| |||||||||||||| |||| |||| ||||||| || ||||||||||||||||||||||| || ||||| | ||||||||||||||||||||    
T  5781 ttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 5682  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  5681 gt--gtgtttgttcctttcttt 5662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 180
Target Start/End: Complemental strand, 2590 - 2471
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||| ||| ||||||||||||| |||| |||| |||||||||| |||||| |||||||||||||||| || |||||   ||||||||||||||||||||    
T  2590 ttcttataattcttttgtaacactttcatcatagtggattggagggctgctgtctcccccagattaggtcatattggagcgaactgggtcaacaatcttg 2491  T
Q  159 ctcggtgtttgttcttttcttt 180  Q
     |  |||||||||| |||||||    
T  2490 gt--gtgtttgttcctttcttt 2471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 133280 - 133377
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||  |||| |||| ||||||||||||||||||||||||||| |||||| || ||||  |  ||||||||||||||||||    
T  133280 ttcttgtaactcttt-gtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattgaacctaactgggtcaacaatctt 133377  T

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Target: scaffold0148 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 10827 - 10728
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatcttg 158  Q
    ||||||||||||||||||||||| |||| | || ||||||||||||||||||||||||||| |||||| || ||||| | |||||||||||| |||||||    
T  10827 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgggtcaataatcttg 10728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 43961 - 44058
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||||||| |||  || ||||| | |||||||||||||||||||    
T  43961 ttcttgtaactcttt-gtaacactttcatcatagtggattggagagctgctctctcccccagaatagatcatattggaccgaactgggtcaacaatctt 44058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 36832 - 36929
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaatctt 157  Q
    ||||||||||||||| ||||||| |||| |||| ||| |||| |||||||||||| ||| |||||||| || ||||| | |||||||||||||||||||    
T  36832 ttcttgtaactcttt-gtaacactttcatcatagtgggttggcgagctgctctcttccctagattaggtcatattggaccgaactgggtcaacaatctt 36929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 45322 - 45253
Alignment:
Q  89 catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaatctt 157  Q
    |||| |||||||||||||||||||||||||||||||||| || ||||  | |||||| ||||||||||||    
T  45322 catagtggattggagagctgctctctcccccagattaggtcatattgaaccgaactgagtcaacaatctt 45253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 17361 - 17266
Alignment:
Q  61 ttcttgtaactcttttgtaacacattca-catattggattggagagctgctctctcccccagattaggccacattg-gctgaactgggtcaacaat 154  Q
    ||||||||||||||||||||||| |||| |||| |||||||||| | ||||||||  |||| |||||| || ||||  | ||||||||||||||||    
T  17361 ttcttgtaactcttttgtaacactttcatcataatggattggagggttgctctctttcccatattaggtcatattgaaccgaactgggtcaacaat 17266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 269 - 329
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  269 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 11533 - 11500
Alignment:
Q  94 tggattggagagctgctctctcccccagattagg 127  Q
    ||||||||||||||||||||||||||||| ||||    
T  11533 tggattggagagctgctctctcccccagactagg 11500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 69352 - 69292
Alignment:
Q  94 tggattggagagctgctctctcccccagattaggccacattgg-ctgaactgggtcaacaa 153  Q
    ||||| ||||||||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  69352 tggatcggagagctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 69292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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