View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11455_low_24 (Length: 288)
Name: NF11455_low_24
Description: NF11455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11455_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 6587450 - 6587181
Alignment:
| Q |
1 |
tgatctagggtttatagtttagatattagaaaatcacccaagtccaataagactgagttagtgcaactgtgagatgataatatatagaagagaaaagatg |
100 |
Q |
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| T |
6587450 |
tgatctagggtttatagtttagatatcagaaaatcacccaagtccaataagactgagttagtgcaactgtgagatgagaatatatagaagagaaaagatg |
6587351 |
T |
|
| Q |
101 |
atgaaaaatgagtgaatggaagtaatagaaatgaaaggtatatgtttaatatttgtgatgtcacataaattaagttgaagggtttgtgtatttatataga |
200 |
Q |
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| T |
6587350 |
atgaaaaatgagtgaatggaagtaatagaaatgaaaggtatatgtttaatatttgtgatgtcacataaattaagttgaagggtttgtgtatttatataga |
6587251 |
T |
|
| Q |
201 |
tagagaagtgatgacatatatagagatctagtcacgagaagattatgcaatggatgcattatttggtatc |
270 |
Q |
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| T |
6587250 |
tagaggagtgatgacatatatagagatctagtcacgagaagattatgcaatggatgcattatttggtatc |
6587181 |
T |
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