View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11455_low_26 (Length: 257)
Name: NF11455_low_26
Description: NF11455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11455_low_26 |
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Alignment Details
Target: chr6 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 20 - 246
Target Start/End: Original strand, 3046195 - 3046411
Alignment:
| Q |
20 |
attacatagaagacattacatcaatcatacctagtggaaagacacacgtctttctccgcttccataaattaactacaatcattgagcttccaaatatgga |
119 |
Q |
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| T |
3046195 |
attacatagaagacattacatcaatcataactagtggaaagacgcacgtctttcttcgcttccataaattaactacaatcattgagcttccaaatatgga |
3046294 |
T |
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| Q |
120 |
agacttccttcatccaaccaaatcgagattcattcttcccatcatatattccaagaacatctaactaacggaatgatatcctttctcaaaatccaccttc |
219 |
Q |
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| T |
3046295 |
agtcttccttcatccaaccaaatcgagattcattcttcccatcatatattcc----------aactaacggaatcatatcctttctcaaaatccaccttc |
3046384 |
T |
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| Q |
220 |
actaacaaacacccttttctacttctt |
246 |
Q |
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||||||||||||||||||||||||||| |
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| T |
3046385 |
actaacaaacacccttttctacttctt |
3046411 |
T |
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