View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11455_low_38 (Length: 209)

Name: NF11455_low_38
Description: NF11455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11455_low_38
NF11455_low_38
[»] chr3 (17 HSPs)
chr3 (18-196)||(51199011-51199189)
chr3 (121-178)||(17593538-17593594)
chr3 (121-178)||(17601546-17601602)
chr3 (119-180)||(18556522-18556583)
chr3 (119-191)||(10496589-10496660)
chr3 (121-180)||(26900789-26900848)
chr3 (121-180)||(26907393-26907452)
chr3 (133-191)||(10497510-10497567)
chr3 (121-175)||(15417673-15417726)
chr3 (133-190)||(26997029-26997085)
chr3 (121-157)||(8854298-8854334)
chr3 (121-160)||(16091696-16091735)
chr3 (121-172)||(19767898-19767948)
chr3 (121-160)||(38700030-38700069)
chr3 (121-170)||(10777084-10777131)
chr3 (119-160)||(16082518-16082559)
chr3 (121-157)||(8857136-8857172)
[»] chr6 (22 HSPs)
chr6 (121-196)||(7433233-7433308)
chr6 (121-178)||(13727888-13727944)
chr6 (121-180)||(19011864-19011923)
chr6 (119-178)||(25969983-25970041)
chr6 (119-178)||(25974423-25974481)
chr6 (121-183)||(16688414-16688475)
chr6 (121-178)||(17997063-17997119)
chr6 (121-180)||(8667948-8668007)
chr6 (126-178)||(19573878-19573929)
chr6 (127-170)||(16666142-16666184)
chr6 (120-170)||(19008738-19008787)
chr6 (127-180)||(19019495-19019548)
chr6 (119-187)||(3121008-3121075)
chr6 (120-163)||(4283037-4283080)
chr6 (121-160)||(19577522-19577561)
chr6 (127-170)||(22467400-22467442)
chr6 (121-163)||(4279755-4279797)
chr6 (120-170)||(8649917-8649966)
chr6 (121-163)||(26455733-26455775)
chr6 (150-191)||(11091769-11091809)
chr6 (121-154)||(18929651-18929684)
chr6 (121-158)||(20090707-20090744)
[»] chr5 (9 HSPs)
chr5 (117-177)||(19049912-19049971)
chr5 (119-178)||(40933062-40933120)
chr5 (121-177)||(40936459-40936514)
chr5 (121-179)||(26863886-26863944)
chr5 (133-191)||(20817281-20817338)
chr5 (120-170)||(38836613-38836662)
chr5 (121-170)||(38840533-38840581)
chr5 (121-178)||(26857654-26857711)
chr5 (121-153)||(38840362-38840394)
[»] chr8 (18 HSPs)
chr8 (118-180)||(14673220-14673282)
chr8 (127-178)||(21935965-21936015)
chr8 (121-178)||(21408228-21408285)
chr8 (121-178)||(21802720-21802777)
chr8 (121-178)||(21834681-21834738)
chr8 (121-178)||(14366000-14366056)
chr8 (121-178)||(21938469-21938525)
chr8 (121-180)||(3299960-3300019)
chr8 (121-160)||(14676431-14676470)
chr8 (127-178)||(20135152-20135202)
chr8 (121-170)||(36281514-36281562)
chr8 (121-160)||(14369580-14369619)
chr8 (121-160)||(14370131-14370170)
chr8 (121-160)||(20132045-20132084)
chr8 (117-158)||(31708760-31708801)
chr8 (121-180)||(3303026-3303085)
chr8 (162-190)||(3668952-3668980)
chr8 (121-153)||(36281701-36281733)
[»] scaffold0167 (1 HSPs)
scaffold0167 (121-178)||(10670-10726)
[»] scaffold0130 (2 HSPs)
scaffold0130 (120-180)||(19193-19253)
scaffold0130 (130-180)||(15194-15244)
[»] chr2 (11 HSPs)
chr2 (121-178)||(23696379-23696435)
chr2 (121-180)||(5771734-5771793)
chr2 (121-180)||(26120824-26120883)
chr2 (121-180)||(26126286-26126345)
chr2 (120-178)||(3071467-3071524)
chr2 (121-178)||(23692592-23692648)
chr2 (121-170)||(29604005-29604053)
chr2 (121-180)||(7311086-7311145)
chr2 (121-180)||(45278810-45278869)
chr2 (121-180)||(45286109-45286168)
chr2 (126-170)||(17932932-17932975)
[»] chr1 (9 HSPs)
chr1 (121-178)||(18433049-18433105)
chr1 (121-178)||(20514228-20514284)
chr1 (121-169)||(20435457-20435504)
chr1 (121-170)||(15158292-15158340)
chr1 (119-160)||(20442356-20442397)
chr1 (121-180)||(15142855-15142914)
chr1 (121-160)||(19749377-19749416)
chr1 (121-160)||(19751603-19751642)
chr1 (119-180)||(5505392-5505452)
[»] scaffold0320 (1 HSPs)
scaffold0320 (120-178)||(11883-11940)
[»] scaffold0037 (1 HSPs)
scaffold0037 (121-179)||(20755-20812)
[»] chr7 (8 HSPs)
chr7 (133-191)||(9697157-9697214)
chr7 (121-178)||(11100006-11100062)
chr7 (121-178)||(43173641-43173697)
chr7 (127-178)||(44356869-44356919)
chr7 (121-169)||(23532737-23532784)
chr7 (121-160)||(44359984-44360023)
chr7 (121-178)||(23522496-23522553)
chr7 (121-170)||(15942444-15942491)
[»] chr4 (3 HSPs)
chr4 (133-191)||(13563534-13563591)
chr4 (133-179)||(53993015-53993060)
chr4 (126-174)||(27788913-27788960)
[»] scaffold0123 (1 HSPs)
scaffold0123 (119-172)||(11099-11151)
[»] scaffold0202 (2 HSPs)
scaffold0202 (121-180)||(10585-10644)
scaffold0202 (121-180)||(14072-14131)
[»] scaffold0074 (1 HSPs)
scaffold0074 (121-180)||(56359-56418)
[»] scaffold1505 (1 HSPs)
scaffold1505 (119-170)||(636-686)
[»] scaffold0023 (2 HSPs)
scaffold0023 (127-178)||(146543-146593)
scaffold0023 (127-160)||(149741-149774)
[»] scaffold0071 (1 HSPs)
scaffold0071 (121-175)||(44512-44565)
[»] scaffold2018 (1 HSPs)
scaffold2018 (121-163)||(932-974)
[»] scaffold0443 (1 HSPs)
scaffold0443 (127-160)||(6523-6556)
[»] scaffold0179 (1 HSPs)
scaffold0179 (121-178)||(24705-24761)
[»] scaffold0139 (1 HSPs)
scaffold0139 (121-178)||(3118-3174)
[»] scaffold0018 (1 HSPs)
scaffold0018 (121-170)||(194455-194504)
[»] scaffold0001 (1 HSPs)
scaffold0001 (121-169)||(150975-151022)


Alignment Details
Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 51199011 - 51199189
Alignment:
Q  18 caaatgagttcacaataccgtctttaagggaccgacatcattcaatttaagtgactaaattgctatttcgtaattttaggggactaaaatgaccgactct 117  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51199011 caaatgagttcataatatcgtctttaagggaccgacatcattcaatttaagtgactaaattgctatttcgtaattttaggggactaaaatgaccgactct 51199110  T
Q  118 tattggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccctctcagaggcctctctgc 196  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||    
T  51199111 tattggaccgtcataatattcctaaggacctaaaagatctccagaaagggcttttagatcctctcagaggcctcactgc 51199189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 17593538 - 17593594
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  17593538 tggaccgtcataatattcctaaggacctgaaagacctcca-aaagggcttttagaccc 17593594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 17601546 - 17601602
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  17601546 tggaccgtcataatattcctaaggacctgaaagacctcca-aaagggcttttagaccc 17601602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 18556522 - 18556583
Alignment:
Q  119 attggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  18556522 attggaccgtcataatattcctatggacctaaaagacctcca-aaagggcttcttagaccctc 18556583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 10496589 - 10496660
Alignment:
Q  119 attggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccctctcagaggcctc 191  Q
    |||||| |||||  |||||||| ||||||||||||||||||||||| || |||||||||||  ||||||||||    
T  10496589 attggaccgtcaatatattcctgaggacctaaaagacctccagaaa-ggtttttagacccttccagaggcctc 10496660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 26900848 - 26900789
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  26900848 tggaccgtcataatattcctaaggacctaagagacctcca-aaagggcttcttagaccctc 26900789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 26907452 - 26907393
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  26907452 tggaccgtcataatattcctaaggacctaagagacctcca-aaagggcttcttagaccctc 26907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 10497510 - 10497567
Alignment:
Q  133 atattcctaaggacctaaaagacctccagaaagggcttttagaccctctcagaggcctc 191  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||||  ||||||||||    
T  10497510 atattcctgaggacctaaaagacctcca-aaaaggcttttagacccttccagaggcctc 10497567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 15417673 - 15417726
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttaga 175  Q
    |||| |||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  15417673 tggaccgtcataatattcctaaggaactgaaagacctcca-aaagggcttttaga 15417726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 26997085 - 26997029
Alignment:
Q  133 atattcctaaggacctaaaagacctccagaaagggcttttagaccctctcagaggcct 190  Q
    ||||| |||||||||||||||||||| || ||||||||| ||||||||| ||||||||    
T  26997085 atatttctaaggacctaaaagacctctag-aagggctttcagaccctcttagaggcct 26997029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 8854334 - 8854298
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacct 157  Q
    |||| ||||||||||||||||||||||||||||||||    
T  8854334 tggaccgtcataatattcctaaggacctaaaagacct 8854298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 16091696 - 16091735
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctcca 160  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  16091696 tggaccgtcataatattcctaaggacctgaaagacctcca 16091735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 19767948 - 19767898
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctttt 172  Q
    |||| |||||||||||| |||||||||| ||||||||||| |||||||||||    
T  19767948 tggaccgtcataatatttctaaggacctgaaagacctcca-aaagggctttt 19767898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 38700030 - 38700069
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctcca 160  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  38700030 tggaccgtcataatattcctaaggacctgaaagacctcca 38700069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 10777131 - 10777084
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt 170  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  10777131 tggaccgtcataatattcctaaggacctaaaa-acctcca-aaagggctt 10777084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 16082518 - 16082559
Alignment:
Q  119 attggatcgtcataatattcctaaggacctaaaagacctcca 160  Q
    |||||| ||| ||||||||||||||||||| |||||||||||    
T  16082518 attggaccgttataatattcctaaggacctgaaagacctcca 16082559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 8857172 - 8857136
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacct 157  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  8857172 tggaccgtcacaatattcctaaggacctaaaagacct 8857136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 5e-21; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 7433233 - 7433308
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccctctcagaggcctctctgc 196  Q
    |||| ||||||||||||||||| | | |||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  7433233 tggaccgtcataatattcctaaaggcttaaaagacctccaggaagggcttttagaccctctcagaggcctcactgc 7433308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 13727944 - 13727888
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  13727944 tggaccgtcataatattcctaaggacctgaaagacctcca-aaagggcttttagaccc 13727888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 19011923 - 19011864
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  19011923 tggaccgtcataatattcctaaggacctaaaagacctcca-aaagggcttcttagaccctc 19011864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 25969983 - 25970041
Alignment:
Q  119 attggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  25969983 attggaccgtcataatattcctaaggacctgaaagacctcca-aaaaggcttttagaccc 25970041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 25974423 - 25974481
Alignment:
Q  119 attggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  25974423 attggaccgtcataatattcctaaggacctgaaagacctcca-aaaaggcttttagaccc 25974481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 16688414 - 16688475
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccctctca 183  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| | || |||||||    
T  16688414 tggaccgtcataatattcctaaggacctaaaagacctcca-aaagggcttcttgaacctctca 16688475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 17997119 - 17997063
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  17997119 tggaccgtcataatattcctaaggacctgaaagacctcca-aaagggtttttagaccc 17997063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 8667948 - 8668007
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  8667948 tggaccgtcataatattcctaaggacctaagagacctcca-aaagggcttcttagaccctc 8668007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 19573929 - 19573878
Alignment:
Q  126 cgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  19573929 cgtcataatattcctaaggacctgaaagacctcca-aaaggacttttagaccc 19573878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 16666142 - 16666184
Alignment:
Q  127 gtcataatattcctaaggacctaaaagacctccagaaagggctt 170  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  16666142 gtcataatattcctaaggacctaaaagacctcca-aaagggctt 16666184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 19008787 - 19008738
Alignment:
Q  120 ttggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt 170  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||||    
T  19008787 ttggaccgtcataatattcctaaggacctaaaagaccttca-aaagggctt 19008738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 19019548 - 19019495
Alignment:
Q  127 gtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  19019548 gtcataatattcctatggacctaaaagacctcca-aaagggcttcttagaccctc 19019495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 187
Target Start/End: Original strand, 3121008 - 3121075
Alignment:
Q  119 attggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccctctcagagg 187  Q
    |||||||| |||  |||||| ||||||||||||||||||||| |||||  ||||| |||||||||||||    
T  3121008 attggatcatcaatatattcataaggacctaaaagacctcca-aaaggaattttaaaccctctcagagg 3121075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 4283080 - 4283037
Alignment:
Q  120 ttggatcgtcataatattcctaaggacctaaaagacctccagaa 163  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||    
T  4283080 ttggaccgtcataatattcctaaggacttaaaagccctccagaa 4283037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 160
Target Start/End: Complemental strand, 19577561 - 19577522
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctcca 160  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  19577561 tggaccgtcataatattcctaaggacctgaaagacctcca 19577522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 22467400 - 22467442
Alignment:
Q  127 gtcataatattcctaaggacctaaaagacctccagaaagggctt 170  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  22467400 gtcataatattcttaaggacctaaaagacctcca-aaagggctt 22467442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 4279797 - 4279755
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaa 163  Q
    |||| ||||||||||||||||||||| |||||| |||||||||    
T  4279797 tggaccgtcataatattcctaaggacttaaaagccctccagaa 4279755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 8649917 - 8649966
Alignment:
Q  120 ttggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt 170  Q
    ||||| |||||||||||| |||||||||||| ||||||||| |||||||||    
T  8649917 ttggaccgtcataatatttctaaggacctaagagacctcca-aaagggctt 8649966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 26455733 - 26455775
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaa 163  Q
    |||||||||||||||||||||||| | |||||| |||||||||    
T  26455733 tggatcgtcataatattcctaagggcttaaaagccctccagaa 26455775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 11091769 - 11091809
Alignment:
Q  150 aaagacctccagaaagggcttttagaccctctcagaggcctc 191  Q
    |||||||||||||| ||||||||||||||||||| |||||||    
T  11091769 aaagacctccagaa-gggcttttagaccctctcataggcctc 11091809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 154
Target Start/End: Complemental strand, 18929684 - 18929651
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaaga 154  Q
    |||| |||||||||||||||||||||||||||||    
T  18929684 tggaccgtcataatattcctaaggacctaaaaga 18929651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 20090744 - 20090707
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctc 158  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  20090744 tggaccgtcataatattcctaaggacctgaaagacctc 20090707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 8e-17; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 19049971 - 19049912
Alignment:
Q  117 ttattggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagacc 177  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  19049971 ttattggaccgtcataatattcctaaggacctaaaagacctcca-aaagggattttagacc 19049912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 40933062 - 40933120
Alignment:
Q  119 attggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||||| ||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  40933062 attggaccgtcataatattcctaaggacctgaaagaccttca-aaagggcttttagaccc 40933120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 40936459 - 40936514
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagacc 177  Q
    |||| ||||||||||||||||||||||| |||||||| || ||||||||||||||||    
T  40936459 tggaccgtcataatattcctaaggacctgaaagaccttca-aaagggcttttagacc 40936514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 26863944 - 26863886
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccct 179  Q
    |||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  26863944 tggaccgtcataatattcctaaggacctgaaagacctcca-aaagggcttcttagaccct 26863886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 20817281 - 20817338
Alignment:
Q  133 atattcctaaggacctaaaagacctccagaaagggcttttagaccctctcagaggcctc 191  Q
    |||||||||||||||| ||||| |||||| |||||||||||||| ||||| ||||||||    
T  20817281 atattcctaaggacctgaaagatctccag-aagggcttttagactctctcggaggcctc 20817338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 38836613 - 38836662
Alignment:
Q  120 ttggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt 170  Q
    ||||| |||||||||||||||||||| |||||||||||||| |||||||||    
T  38836613 ttggaccgtcataatattcctaaggatctaaaagacctcca-aaagggctt 38836662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 38840533 - 38840581
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt 170  Q
    |||| |||||||||||||||||||| |||||||||||||| |||||||||    
T  38840533 tggaccgtcataatattcctaaggatctaaaagacctcca-aaagggctt 38840581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 26857711 - 26857654
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccc 178  Q
    |||| |||||||||||||||||||| || ||||||||||| ||||||||| ||||||||    
T  26857711 tggaccgtcataatattcctaaggaactgaaagacctcca-aaagggcttcttagaccc 26857654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 38840362 - 38840394
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaag 153  Q
    |||| ||||||||||||||||||||||||||||    
T  38840362 tggaccgtcataatattcctaaggacctaaaag 38840394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 3e-16; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 14673220 - 14673282
Alignment:
Q  118 tattggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  14673220 tattggaccgtcataatattcctaaggacctaaaagacctcca-aaagggcttcttagaccctc 14673282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 21935965 - 21936015
Alignment:
Q  127 gtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  21935965 gtcataatattcctaaggacctgaaagacctcca-aaagggcttttagaccc 21936015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 21408228 - 21408285
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccc 178  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  21408228 tggaccgtcataatattcctaaggacctaaaagacctcca-aaagggcttcttagaccc 21408285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 21802720 - 21802777
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccc 178  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  21802720 tggaccgtcataatattcctaaggacctaaaagacctcca-aaagggcttcttagaccc 21802777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 21834681 - 21834738
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccc 178  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  21834681 tggaccgtcataatattcctaaggacctaaaagacctcca-aaagggcttcttagaccc 21834738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 14366000 - 14366056
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  14366000 tggaccgtcataatattcctaaggacctgaaagacctcca-aaaggacttttagaccc 14366056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 21938469 - 21938525
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  21938469 tggaccgtcataatgttcctaaggacctgaaagacctcca-aaagggcttttagaccc 21938525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 3299960 - 3300019
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  3299960 tggaccgtcataatattcctatggacctaaaagacctcca-aaagggcttcttagaccctc 3300019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 14676431 - 14676470
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctcca 160  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  14676431 tggaccgtcataatattcctaaggacctaaaagacctcca 14676470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 20135202 - 20135152
Alignment:
Q  127 gtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  20135202 gtcataatattcctaaggacctgaaagacctcca-aaaggacttttagaccc 20135152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 36281562 - 36281514
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt 170  Q
    |||| |||||||||||||||||||| |||||||||||||| |||||||||    
T  36281562 tggaccgtcataatattcctaaggatctaaaagacctcca-aaagggctt 36281514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 14369580 - 14369619
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctcca 160  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  14369580 tggaccgtcataatattcctaaggacctgaaagacctcca 14369619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 14370131 - 14370170
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctcca 160  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  14370131 tggaccgtcataatattcctaaggacctgaaagacctcca 14370170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 160
Target Start/End: Complemental strand, 20132084 - 20132045
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctcca 160  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  20132084 tggaccgtcataatattcctaaggacctgaaagacctcca 20132045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 31708760 - 31708801
Alignment:
Q  117 ttattggatcgtcataatattcctaaggacctaaaagacctc 158  Q
    |||||||| ||||||||||||||||||||||| || ||||||    
T  31708760 ttattggaccgtcataatattcctaaggacctgaaggacctc 31708801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 3303026 - 3303085
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| ||||||||||||| || ||||||||||||| |||| ||||||||| ||||||||||    
T  3303026 tggaccgtcataatattcatatggacctaaaagacttcca-aaagggcttcttagaccctc 3303085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 190
Target Start/End: Complemental strand, 3668980 - 3668952
Alignment:
Q  162 aaagggcttttagaccctctcagaggcct 190  Q
    |||||||||||||||||||||||||||||    
T  3668980 aaagggcttttagaccctctcagaggcct 3668952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 36281733 - 36281701
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaag 153  Q
    |||| ||||||||||||||||||||||||||||    
T  36281733 tggaccgtcataatattcctaaggacctaaaag 36281701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 10726 - 10670
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  10726 tggaccgtcataatattcctaaggacctaaaagacctcca-aaagggcgtttagaccc 10670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 19253 - 19193
Alignment:
Q  120 ttggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  19253 ttggaccgtcataatattcctaaggacctaaaagacctcca-aaagggcttcttagaccctc 19193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 15244 - 15194
Alignment:
Q  130 ataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  15244 ataatattcctaaggacctaaaagacctcca-aaagggcttcttagaccctc 15194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 23696379 - 23696435
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  23696379 tggaccgtcataatattcctaaggacctgaaagacctcca-aaagggcttttagaccc 23696435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 5771734 - 5771793
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  5771734 tggaccgtcataatattcctaaggacctaaaagacctcca-aaagggcttcttagaccctc 5771793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 26120883 - 26120824
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  26120883 tggaccgtcataatattcctaaggacctaaaagacctcca-aaagggcttcttagaccctc 26120824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 26126345 - 26126286
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  26126345 tggaccgtcataatattcctaaggacctaaaagacctcca-aaagggcttcttagaccctc 26126286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 3071467 - 3071524
Alignment:
Q  120 ttggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    ||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  3071467 ttggaccgtcatagtattcctaaggacctgaaagacctcca-aaagggcttttagaccc 3071524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 23692592 - 23692648
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  23692592 tggaccgtcataatattcttaaggacctgaaagacctcca-aaagggcttttagaccc 23692648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 29604053 - 29604005
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt 170  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  29604053 tggaccgtcataatattcctaaggacctaaaagacctcca-aaagggctt 29604005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 7311145 - 7311086
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  7311145 tggaccgtcataatattcctatggacctaaaagacctcca-aaagggcttcttagaccctc 7311086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 45278810 - 45278869
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  45278810 tggaccgtgataatattcctaaggacctaaaagacctcca-aaagggcttcttagaccctc 45278869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 45286109 - 45286168
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  45286109 tggaccgtgataatattcctaaggacctaaaagacctcca-aaagggcttcttagaccctc 45286168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 17932975 - 17932932
Alignment:
Q  126 cgtcataatattcctaaggacctaaaagacctccagaaagggctt 170  Q
    |||||||||||||||| |||||||||||||||||| |||||||||    
T  17932975 cgtcataatattcctatggacctaaaagacctcca-aaagggctt 17932932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 18433049 - 18433105
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  18433049 tggaccgtcataatattcctaaggacctgaaagacctcca-aaagggcttttagaccc 18433105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 20514228 - 20514284
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  20514228 tggaccgtcataatattcctaaggacctaaaagacctcca-aaaggacttttagaccc 20514284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 20435504 - 20435457
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggct 169  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  20435504 tggaccgtcataatattcctaaggacctaaaagacctcca-aaagggct 20435457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 15158340 - 15158292
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt 170  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||||||    
T  15158340 tggaccgtcataatattcctatggacctaaaagacctcca-aaagggctt 15158292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 20442356 - 20442397
Alignment:
Q  119 attggatcgtcataatattcctaaggacctaaaagacctcca 160  Q
    |||||| ||||||||||||||||||||||| |||||||||||    
T  20442356 attggaccgtcataatattcctaaggacctgaaagacctcca 20442397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 15142914 - 15142855
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||| || ||||||||||    
T  15142914 tggaccgtcataatattcctatggacctaaaagacctcca-aaagggattcttagaccctc 15142855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 19749377 - 19749416
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctcca 160  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  19749377 tggaccgtcataatattcctaaggacctgaaagacctcca 19749416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 19751603 - 19751642
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctcca 160  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  19751603 tggaccgtcataatattcctaaggacctgaaagacctcca 19751642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 5505392 - 5505452
Alignment:
Q  119 attggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccctc 180  Q
    |||||||||||   || |||||||| ||||||||||||| || |||||||||||||||||||    
T  5505392 attggatcgtcgatatcttcctaagcacctaaaagaccttca-aaagggcttttagaccctc 5505452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 11883 - 11940
Alignment:
Q  120 ttggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    ||||| ||||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  11883 ttggaccgtcataatattcctaaggacctgaaagacct-caaaaagggcttttagaccc 11940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 20812 - 20755
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccct 179  Q
    |||| ||||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  20812 tggaccgtcataatattcctaaggacctgaaagacctcca-caagggcttttagaccct 20755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 9697214 - 9697157
Alignment:
Q  133 atattcctaaggacctaaaagacctccagaaagggcttttagaccctctcagaggcctc 191  Q
    |||||| ||||||||||||||||||| |||| ||||||||||||||||||||| |||||    
T  9697214 atattcttaaggacctaaaagacctctagaa-gggcttttagaccctctcagatgcctc 9697157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 11100006 - 11100062
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  11100006 tggaccgtcataatattcctaaggacctgaaagacctcca-aaagggtttttagaccc 11100062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 43173697 - 43173641
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  43173697 tggaccgtcataatattcttaaggacctgaaagacctcca-aaagggcttttagaccc 43173641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 44356869 - 44356919
Alignment:
Q  127 gtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  44356869 gtcataatattcctaaggacctgaaagacctcca-aaaggacttttagaccc 44356919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 23532784 - 23532737
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggct 169  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||    
T  23532784 tggaccgtcataatattcctaaggacttaaaagacctcca-aaagggct 23532737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 44359984 - 44360023
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctcca 160  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  44359984 tggaccgtcataatattcctaaggacctgaaagacctcca 44360023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 23522553 - 23522496
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccc 178  Q
    |||| |||||||||||||||||||||  |||||||||||| ||||||||| ||||||||    
T  23522553 tggaccgtcataatattcctaaggactcaaaagacctcca-aaagggcttcttagaccc 23522496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 15942491 - 15942444
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt 170  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  15942491 tggaccgtcataatattcctaaggacctaaaa-acctcca-aaagggctt 15942444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 13563591 - 13563534
Alignment:
Q  133 atattcctaaggacctaaaagacctccagaaagggcttttagaccctctcagaggcctc 191  Q
    |||||| ||||||||||||||||||| |||| ||||||||||||||||||||| |||||    
T  13563591 atattcttaaggacctaaaagacctctagaa-gggcttttagaccctctcagatgcctc 13563534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 53993015 - 53993060
Alignment:
Q  133 atattcctaaggacctaaaagacctccagaaagggcttttagaccct 179  Q
    ||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  53993015 atatttctaaggacctaaaagacctcca-aaaaggcttttagaccct 53993060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 27788913 - 27788960
Alignment:
Q  126 cgtcataatattcctaaggacctaaaagacctccagaaagggcttttag 174  Q
    ||||||||||||||||||||||| |||| |||||| ||||||| |||||    
T  27788913 cgtcataatattcctaaggacctgaaaggcctcca-aaagggcatttag 27788960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 11151 - 11099
Alignment:
Q  119 attggatcgtcataatattcctaaggacctaaaagacctccagaaagggctttt 172  Q
    |||||| ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  11151 attggaccgtcataatattcctaaggacctgaaagacctcca-aaagggctttt 11099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 10644 - 10585
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  10644 tggaccgtcataatattcctaaggacctaagagacctcca-aaagggcttcttagaccctc 10585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 14131 - 14072
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  14131 tggaccgtcataatattcctaaggacctaagagacctcca-aaagggcttcttagaccctc 14072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 56359 - 56418
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt-ttagaccctc 180  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  56359 tggaccgtcataatattcctaaggacctaaaagacctcca-aaagggtttcttagaccctc 56418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1505 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1505
Description:

Target: scaffold1505; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 686 - 636
Alignment:
Q  119 attggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt 170  Q
    |||||| |||||||||||||||||||||||||| |||||||| |||||||||    
T  686 attggaccgtcataatattcctaaggacctaaaggacctcca-aaagggctt 636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 146543 - 146593
Alignment:
Q  127 gtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  146543 gtcataatattcctaaggacctgaaagacctcca-aaaggacttttagaccc 146593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 149741 - 149774
Alignment:
Q  127 gtcataatattcctaaggacctaaaagacctcca 160  Q
    |||||||||||||||||||||| |||||||||||    
T  149741 gtcataatattcctaaggacctgaaagacctcca 149774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 44565 - 44512
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttaga 175  Q
    |||| |||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  44565 tggaccgtcataatattcctaaggaactgaaagacctcca-aaagggcttttaga 44512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold2018
Description:

Target: scaffold2018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 932 - 974
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaa 163  Q
    |||| ||||||||||||||||||||| |||||| |||||||||    
T  932 tggaccgtcataatattcctaaggacttaaaagccctccagaa 974  T

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Target: scaffold0443 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 6556 - 6523
Alignment:
Q  127 gtcataatattcctaaggacctaaaagacctcca 160  Q
    |||||||||||||||||||||| |||||||||||    
T  6556 gtcataatattcctaaggacctgaaagacctcca 6523  T

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Target: scaffold0179 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 24705 - 24761
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||||||||||||||||| || |||||| | |||||||||| ||||||    
T  24705 tggaccgtcataatattcctaaggacctgaaggacctcta-aaagggctttaagaccc 24761  T

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Target: scaffold0139 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 3174 - 3118
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggcttttagaccc 178  Q
    |||| ||||||||||||||||||||||| || ||| | || |||||||||||||||||    
T  3174 tggaccgtcataatattcctaaggacctgaaggactttca-aaagggcttttagaccc 3118  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 194455 - 194504
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggctt 170  Q
    |||| ||||||||||||||||||||||| || |||||| | |||||||||    
T  194455 tggaccgtcataatattcctaaggacctgaaggacctctaaaaagggctt 194504  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 151022 - 150975
Alignment:
Q  121 tggatcgtcataatattcctaaggacctaaaagacctccagaaagggct 169  Q
    |||| ||||||||||||||||||||||| || |||||||| ||||||||    
T  151022 tggaccgtcataatattcctaaggacctgaaggacctcca-aaagggct 150975  T

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