View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11455_low_5 (Length: 548)

Name: NF11455_low_5
Description: NF11455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11455_low_5
NF11455_low_5
[»] chr3 (67 HSPs)
chr3 (127-548)||(38118760-38119181)
chr3 (1-131)||(10297981-10298111)
chr3 (1-130)||(49823380-49823509)
chr3 (1-130)||(51406675-51406804)
chr3 (1-129)||(19557052-19557180)
chr3 (1-129)||(38964394-38964522)
chr3 (1-130)||(22721933-22722062)
chr3 (1-133)||(8817382-8817514)
chr3 (1-129)||(34080030-34080158)
chr3 (1-129)||(48340399-48340527)
chr3 (4-131)||(17653717-17653844)
chr3 (4-130)||(37508926-37509052)
chr3 (5-131)||(40690994-40691120)
chr3 (1-130)||(4238596-4238725)
chr3 (1-130)||(8437427-8437556)
chr3 (5-129)||(2787832-2787956)
chr3 (1-129)||(21295326-21295454)
chr3 (1-129)||(44785396-44785524)
chr3 (4-130)||(46208035-46208161)
chr3 (1-126)||(9111497-9111622)
chr3 (1-126)||(42507358-42507483)
chr3 (1-134)||(42170341-42170474)
chr3 (4-131)||(36095678-36095805)
chr3 (4-129)||(6013336-6013461)
chr3 (8-129)||(35513482-35513603)
chr3 (418-548)||(38129096-38129226)
chr3 (6-130)||(33942931-33943055)
chr3 (4-129)||(9213521-9213646)
chr3 (70-132)||(45652066-45652128)
chr3 (74-131)||(9027140-9027197)
chr3 (64-129)||(34988140-34988205)
chr3 (47-134)||(5323254-5323342)
chr3 (6-95)||(8092595-8092684)
chr3 (67-132)||(34381464-34381529)
chr3 (85-130)||(46208029-46208074)
chr3 (73-129)||(2131746-2131802)
chr3 (85-133)||(4238590-4238638)
chr3 (85-129)||(17653712-17653756)
chr3 (85-133)||(22721927-22721975)
chr3 (85-129)||(37508921-37508965)
chr3 (11-83)||(43323072-43323144)
chr3 (4-131)||(9213514-9213641)
chr3 (85-132)||(21295412-21295459)
chr3 (85-132)||(34080116-34080163)
chr3 (85-131)||(44785482-44785528)
chr3 (85-130)||(19557138-19557183)
chr3 (73-130)||(34988074-34988131)
chr3 (85-130)||(36095766-36095811)
chr3 (85-130)||(49823467-49823512)
chr3 (85-133)||(2787918-2787966)
chr3 (85-129)||(10297979-10298023)
chr3 (85-129)||(35513473-35513517)
chr3 (85-133)||(38964388-38964436)
chr3 (85-132)||(8437422-8437469)
chr3 (4-131)||(26019478-26019604)
chr3 (85-132)||(42170432-42170479)
chr3 (85-132)||(42507441-42507488)
chr3 (85-131)||(8817472-8817518)
chr3 (85-131)||(9111580-9111626)
chr3 (71-132)||(42299637-42299698)
chr3 (104-132)||(21662882-21662910)
chr3 (102-130)||(40215022-40215050)
chr3 (11-39)||(45093582-45093610)
chr3 (85-129)||(48340397-48340441)
chr3 (85-129)||(51406673-51406717)
chr3 (101-133)||(51698109-51698141)
chr3 (104-132)||(53441903-53441931)
[»] chr8 (62 HSPs)
chr8 (1-131)||(39571201-39571331)
chr8 (1-132)||(7785775-7785906)
chr8 (1-131)||(32114473-32114603)
chr8 (1-131)||(32211361-32211491)
chr8 (1-130)||(54611-54740)
chr8 (1-130)||(2890161-2890290)
chr8 (1-129)||(6552657-6552785)
chr8 (1-129)||(33289261-33289389)
chr8 (1-133)||(44498183-44498315)
chr8 (1-132)||(7805696-7805827)
chr8 (1-131)||(15888350-15888480)
chr8 (1-130)||(43199353-43199482)
chr8 (1-129)||(3304278-3304406)
chr8 (1-131)||(7012173-7012303)
chr8 (1-131)||(12763652-12763782)
chr8 (1-130)||(25600999-25601128)
chr8 (1-123)||(12343146-12343268)
chr8 (4-129)||(31654618-31654743)
chr8 (1-130)||(13578859-13578988)
chr8 (48-133)||(27422239-27422324)
chr8 (4-130)||(8587175-8587301)
chr8 (4-130)||(33057599-33057725)
chr8 (2-130)||(28463614-28463742)
chr8 (11-122)||(24691986-24692096)
chr8 (1-58)||(4245652-4245709)
chr8 (74-133)||(33057590-33057649)
chr8 (75-129)||(8587170-8587224)
chr8 (438-548)||(35111244-35111354)
chr8 (75-124)||(28463616-28463665)
chr8 (85-133)||(54698-54746)
chr8 (85-129)||(31654613-31654657)
chr8 (85-132)||(2890248-2890295)
chr8 (83-130)||(32211447-32211494)
chr8 (62-113)||(35564706-35564757)
chr8 (85-131)||(4245667-4245713)
chr8 (85-131)||(7785864-7785910)
chr8 (85-131)||(7805785-7805831)
chr8 (4-114)||(17006916-17007026)
chr8 (4-114)||(17570221-17570331)
chr8 (73-126)||(17006914-17006967)
chr8 (73-126)||(17570280-17570333)
chr8 (85-130)||(43199440-43199485)
chr8 (85-129)||(3304364-3304408)
chr8 (85-129)||(6552655-6552699)
chr8 (85-129)||(12343226-12343270)
chr8 (73-121)||(15688038-15688086)
chr8 (85-129)||(15888438-15888482)
chr8 (76-128)||(30171483-30171535)
chr8 (85-129)||(32114561-32114605)
chr8 (85-129)||(44498273-44498317)
chr8 (1-32)||(6899421-6899452)
chr8 (35-122)||(13246801-13246888)
chr8 (6-56)||(13246801-13246851)
chr8 (73-131)||(24692052-24692110)
chr8 (85-130)||(12763740-12763785)
chr8 (85-130)||(25601086-25601131)
chr8 (4-32)||(5031468-5031496)
chr8 (85-129)||(7012171-7012215)
chr8 (88-132)||(33289350-33289394)
chr8 (101-133)||(34028504-34028536)
chr8 (85-129)||(39571289-39571333)
chr8 (102-130)||(41915592-41915620)
[»] chr6 (45 HSPs)
chr6 (1-131)||(8099532-8099662)
chr6 (1-130)||(35031000-35031129)
chr6 (1-132)||(26602325-26602456)
chr6 (1-130)||(6068568-6068697)
chr6 (1-130)||(6330117-6330246)
chr6 (1-130)||(11572144-11572273)
chr6 (1-129)||(2830337-2830465)
chr6 (1-129)||(8382969-8383097)
chr6 (1-130)||(13853592-13853721)
chr6 (1-131)||(9644698-9644828)
chr6 (1-131)||(9650715-9650845)
chr6 (1-131)||(33052792-33052922)
chr6 (4-129)||(8417793-8417918)
chr6 (1-129)||(6143556-6143684)
chr6 (15-130)||(28747133-28747248)
chr6 (41-129)||(17992030-17992118)
chr6 (1-91)||(13043760-13043850)
chr6 (50-130)||(22896513-22896593)
chr6 (55-130)||(3788093-3788168)
chr6 (4-130)||(14936456-14936582)
chr6 (60-129)||(7596977-7597046)
chr6 (7-95)||(6068974-6069062)
chr6 (73-129)||(8186441-8186497)
chr6 (85-132)||(8383055-8383102)
chr6 (85-131)||(33052880-33052926)
chr6 (85-130)||(2830334-2830379)
chr6 (85-130)||(8099529-8099574)
chr6 (85-130)||(11572231-11572276)
chr6 (75-132)||(14936533-14936590)
chr6 (88-129)||(22896471-22896512)
chr6 (85-129)||(6330115-6330159)
chr6 (18-114)||(6549902-6549997)
chr6 (85-133)||(8417879-8417927)
chr6 (85-133)||(13853679-13853727)
chr6 (85-129)||(26602323-26602367)
chr6 (83-129)||(9644696-9644742)
chr6 (83-129)||(9650713-9650759)
chr6 (83-129)||(13043758-13043804)
chr6 (85-130)||(6143553-6143598)
chr6 (85-130)||(35031087-35031132)
chr6 (85-133)||(6068562-6068610)
chr6 (101-133)||(24949626-24949658)
chr6 (104-140)||(25537974-25538010)
chr6 (75-123)||(31849586-31849634)
chr6 (62-110)||(33393165-33393213)
[»] chr7 (46 HSPs)
chr7 (1-133)||(7240751-7240883)
chr7 (1-132)||(1738444-1738575)
chr7 (1-133)||(7482227-7482359)
chr7 (1-129)||(46840862-46840990)
chr7 (1-132)||(38063910-38064041)
chr7 (1-130)||(9268758-9268887)
chr7 (1-129)||(23314139-23314267)
chr7 (1-129)||(31319399-31319527)
chr7 (1-132)||(36583397-36583528)
chr7 (1-130)||(1565728-1565857)
chr7 (4-129)||(22285704-22285829)
chr7 (1-130)||(28536750-28536879)
chr7 (1-130)||(4790250-4790379)
chr7 (5-129)||(94318-94442)
chr7 (1-129)||(38441462-38441590)
chr7 (4-129)||(36016196-36016321)
chr7 (15-123)||(33418392-33418500)
chr7 (4-129)||(9575414-9575539)
chr7 (5-122)||(40840126-40840243)
chr7 (4-122)||(7269412-7269530)
chr7 (72-129)||(7269478-7269535)
chr7 (70-130)||(7661147-7661207)
chr7 (85-133)||(22285695-22285743)
chr7 (85-133)||(1738533-1738581)
chr7 (85-133)||(7240745-7240793)
chr7 (85-129)||(36016282-36016326)
chr7 (85-131)||(1565815-1565861)
chr7 (85-131)||(46840858-46840904)
chr7 (85-130)||(7482224-7482269)
chr7 (85-130)||(28536837-28536882)
chr7 (85-130)||(38063999-38064044)
chr7 (64-117)||(39019840-39019893)
chr7 (85-133)||(9268752-9268800)
chr7 (85-129)||(23314225-23314269)
chr7 (85-129)||(31319485-31319529)
chr7 (85-129)||(36583395-36583439)
chr7 (83-130)||(4790247-4790294)
chr7 (71-122)||(29993251-29993302)
chr7 (85-123)||(94404-94442)
chr7 (85-131)||(9575407-9575453)
chr7 (74-128)||(46877665-46877719)
chr7 (96-133)||(3411448-3411485)
chr7 (101-130)||(5347721-5347750)
chr7 (75-132)||(24710745-24710802)
chr7 (58-114)||(36033241-36033297)
chr7 (85-129)||(38441460-38441504)
[»] chr5 (50 HSPs)
chr5 (1-133)||(9395352-9395484)
chr5 (1-131)||(41989405-41989535)
chr5 (4-133)||(13103029-13103158)
chr5 (1-130)||(36563537-36563666)
chr5 (1-129)||(37148955-37149083)
chr5 (1-130)||(11795170-11795299)
chr5 (4-133)||(13033056-13033185)
chr5 (1-129)||(20848076-20848203)
chr5 (1-129)||(23359944-23360072)
chr5 (1-130)||(17025626-17025755)
chr5 (1-130)||(37641955-37642085)
chr5 (4-131)||(26350348-26350475)
chr5 (20-129)||(6126845-6126954)
chr5 (1-129)||(582991-583118)
chr5 (26-130)||(21575973-21576077)
chr5 (8-126)||(4443969-4444087)
chr5 (8-132)||(966157-966281)
chr5 (4-77)||(38361743-38361816)
chr5 (47-121)||(36595782-36595856)
chr5 (62-126)||(9006885-9006949)
chr5 (85-133)||(37149041-37149089)
chr5 (48-115)||(2366352-2366419)
chr5 (5-115)||(3549553-3549663)
chr5 (75-129)||(39290775-39290828)
chr5 (88-133)||(582985-583030)
chr5 (101-142)||(7053768-7053809)
chr5 (80-129)||(11574161-11574210)
chr5 (85-130)||(13033050-13033095)
chr5 (85-130)||(13103023-13103068)
chr5 (14-115)||(18167334-18167435)
chr5 (84-133)||(37641949-37641998)
chr5 (4-112)||(2629561-2629669)
chr5 (85-129)||(9395350-9395394)
chr5 (85-129)||(26350436-26350480)
chr5 (48-116)||(39290823-39290891)
chr5 (83-122)||(13539947-13539986)
chr5 (85-132)||(20848071-20848118)
chr5 (102-132)||(1643466-1643496)
chr5 (85-131)||(4443958-4444004)
chr5 (104-134)||(13789726-13789756)
chr5 (85-131)||(17025622-17025668)
chr5 (85-131)||(36563624-36563670)
chr5 (99-129)||(38361713-38361743)
chr5 (4-53)||(966224-966273)
chr5 (85-130)||(23359941-23359986)
chr5 (48-132)||(35904448-35904530)
chr5 (96-133)||(36417042-36417079)
chr5 (85-130)||(41989493-41989538)
chr5 (62-110)||(3280421-3280469)
chr5 (85-129)||(11795168-11795212)
[»] chr4 (65 HSPs)
chr4 (1-129)||(6121893-6122021)
chr4 (1-129)||(20538686-20538814)
chr4 (1-129)||(47833613-47833741)
chr4 (1-133)||(48336265-48336397)
chr4 (1-130)||(3904682-3904811)
chr4 (1-130)||(53337372-53337501)
chr4 (1-129)||(3372123-3372251)
chr4 (1-129)||(51894582-51894710)
chr4 (1-130)||(3992978-3993107)
chr4 (1-130)||(24704372-24704501)
chr4 (1-129)||(7579312-7579440)
chr4 (1-129)||(42797734-42797862)
chr4 (1-129)||(46797727-46797855)
chr4 (1-133)||(47838613-47838745)
chr4 (8-132)||(33621805-33621929)
chr4 (4-129)||(43900554-43900679)
chr4 (5-130)||(52756681-52756806)
chr4 (4-128)||(40913190-40913314)
chr4 (8-132)||(41469763-41469887)
chr4 (1-132)||(5986878-5987009)
chr4 (11-133)||(3422073-3422194)
chr4 (1-110)||(33551203-33551312)
chr4 (1-110)||(26231579-26231688)
chr4 (11-129)||(41615676-41615794)
chr4 (14-116)||(50430431-50430533)
chr4 (5-131)||(17344219-17344345)
chr4 (4-129)||(4780301-4780425)
chr4 (75-130)||(17236864-17236919)
chr4 (85-131)||(43900547-43900593)
chr4 (10-129)||(29845656-29845769)
chr4 (14-95)||(31013036-31013117)
chr4 (60-124)||(45478153-45478217)
chr4 (85-133)||(47833607-47833655)
chr4 (85-133)||(48336259-48336307)
chr4 (85-132)||(3372118-3372165)
chr4 (85-132)||(3992973-3993020)
chr4 (4-98)||(25855088-25855182)
chr4 (85-130)||(26231576-26231621)
chr4 (85-130)||(33551200-33551245)
chr4 (64-129)||(38160372-38160437)
chr4 (85-130)||(40913275-40913320)
chr4 (73-129)||(1716301-1716357)
chr4 (85-129)||(20538772-20538816)
chr4 (85-129)||(24704370-24704414)
chr4 (73-129)||(44900080-44900136)
chr4 (85-133)||(51894668-51894716)
chr4 (85-129)||(53337370-53337414)
chr4 (5-71)||(17236845-17236912)
chr4 (85-132)||(42797729-42797776)
chr4 (62-131)||(6422530-6422600)
chr4 (73-131)||(35663912-35663970)
chr4 (76-132)||(3079678-3079735)
chr4 (85-130)||(3904769-3904814)
chr4 (4-53)||(4780371-4780420)
chr4 (85-130)||(7579309-7579354)
chr4 (4-45)||(40913194-40913235)
chr4 (85-130)||(47838703-47838748)
chr4 (104-133)||(48361047-48361076)
chr4 (65-117)||(1716365-1716417)
chr4 (85-129)||(6121979-6122023)
chr4 (62-114)||(23226018-23226070)
chr4 (75-130)||(24393895-24393951)
chr4 (82-130)||(29845644-29845692)
chr4 (4-32)||(41116566-41116594)
chr4 (85-129)||(46797725-46797769)
[»] chr2 (47 HSPs)
chr2 (1-132)||(41478636-41478767)
chr2 (1-131)||(3055560-3055690)
chr2 (1-131)||(37990011-37990141)
chr2 (1-130)||(44398688-44398817)
chr2 (1-129)||(13197710-13197838)
chr2 (1-129)||(15896844-15896972)
chr2 (5-133)||(16243779-16243907)
chr2 (1-130)||(38917521-38917650)
chr2 (1-130)||(44397549-44397678)
chr2 (1-133)||(6648515-6648647)
chr2 (1-129)||(12337937-12338065)
chr2 (1-132)||(37666607-37666738)
chr2 (1-129)||(16044317-16044445)
chr2 (5-132)||(9047752-9047879)
chr2 (1-130)||(13344486-13344615)
chr2 (4-129)||(15372231-15372356)
chr2 (1-130)||(30099181-30099310)
chr2 (10-132)||(41492893-41493015)
chr2 (1-110)||(4683951-4684060)
chr2 (27-126)||(44804581-44804680)
chr2 (4-133)||(12170395-12170524)
chr2 (18-126)||(16734802-16734910)
chr2 (85-133)||(15372222-15372270)
chr2 (5-120)||(31150659-31150769)
chr2 (85-131)||(37990099-37990145)
chr2 (85-131)||(41478725-41478771)
chr2 (85-130)||(3055557-3055602)
chr2 (85-130)||(4684018-4684063)
chr2 (64-129)||(13724102-13724167)
chr2 (85-130)||(15896841-15896886)
chr2 (85-130)||(44397546-44397591)
chr2 (85-130)||(44398685-44398730)
chr2 (85-129)||(13197796-13197840)
chr2 (83-131)||(13344482-13344530)
chr2 (101-133)||(13775832-13775864)
chr2 (85-129)||(16044403-16044447)
chr2 (85-129)||(37666696-37666740)
chr2 (70-137)||(15258783-15258850)
chr2 (83-129)||(6648603-6648649)
chr2 (75-133)||(23227348-23227406)
chr2 (14-87)||(4553052-4553125)
chr2 (83-124)||(30099266-30099307)
chr2 (101-130)||(30852719-30852748)
chr2 (9-94)||(36688892-36688977)
chr2 (24-89)||(41453084-41453149)
chr2 (101-130)||(42263468-42263497)
chr2 (62-130)||(20900727-20900794)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-133)||(23787-23919)
scaffold0204 (85-133)||(23781-23829)
[»] chr1 (56 HSPs)
chr1 (1-133)||(9981649-9981781)
chr1 (1-129)||(27159358-27159486)
chr1 (1-129)||(31842795-31842923)
chr1 (1-129)||(39401966-39402094)
chr1 (1-129)||(44668093-44668221)
chr1 (5-132)||(14984843-14984970)
chr1 (1-130)||(47216698-47216827)
chr1 (1-129)||(11795935-11796063)
chr1 (1-129)||(26471065-26471193)
chr1 (11-130)||(25694331-25694450)
chr1 (1-131)||(1050890-1051020)
chr1 (1-131)||(34042698-34042828)
chr1 (1-123)||(44955212-44955334)
chr1 (1-129)||(47777481-47777609)
chr1 (1-132)||(12483625-12483756)
chr1 (1-132)||(47588334-47588465)
chr1 (1-109)||(23278021-23278129)
chr1 (5-133)||(47969700-47969829)
chr1 (4-130)||(17556757-17556884)
chr1 (4-131)||(11897059-11897186)
chr1 (4-130)||(37552146-37552272)
chr1 (4-119)||(12213484-12213599)
chr1 (4-129)||(16448108-16448233)
chr1 (14-129)||(11989796-11989911)
chr1 (73-130)||(16448182-16448239)
chr1 (73-130)||(11897053-11897110)
chr1 (7-119)||(12062568-12062679)
chr1 (48-131)||(1598380-1598461)
chr1 (11-122)||(12043616-12043726)
chr1 (85-134)||(27159444-27159493)
chr1 (85-134)||(44668179-44668228)
chr1 (4-132)||(12483633-12483761)
chr1 (75-130)||(12213550-12213605)
chr1 (85-132)||(26471151-26471198)
chr1 (83-130)||(34042695-34042742)
chr1 (78-132)||(5392144-5392198)
chr1 (85-131)||(11795931-11795977)
chr1 (83-129)||(23278085-23278131)
chr1 (7-129)||(37552141-37552263)
chr1 (85-130)||(9981646-9981691)
chr1 (85-129)||(1050888-1050932)
chr1 (48-115)||(12047155-12047223)
chr1 (85-129)||(31842881-31842925)
chr1 (85-129)||(39402052-39402096)
chr1 (85-129)||(47216785-47216829)
chr1 (6-53)||(12043679-12043726)
chr1 (1-32)||(47678371-47678402)
chr1 (85-123)||(14984843-14984881)
chr1 (73-131)||(21537943-21538001)
chr1 (2-32)||(47844536-47844566)
chr1 (85-130)||(17556751-17556796)
chr1 (104-132)||(26760297-26760325)
chr1 (104-132)||(26924209-26924237)
chr1 (104-132)||(26924337-26924365)
chr1 (85-129)||(44955292-44955336)
chr1 (85-121)||(47777567-47777603)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-132)||(12862-12993)
scaffold0482 (85-131)||(12858-12904)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-133)||(6127-6259)
scaffold0464 (85-129)||(6217-6261)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-129)||(49507-49635)
scaffold0009 (85-131)||(49503-49549)
[»] scaffold1707 (2 HSPs)
scaffold1707 (1-117)||(1337-1453)
scaffold1707 (85-122)||(1342-1379)
[»] scaffold0011 (2 HSPs)
scaffold0011 (4-131)||(231301-231428)
scaffold0011 (73-129)||(231377-231433)
[»] scaffold0415 (2 HSPs)
scaffold0415 (10-129)||(13731-13845)
scaffold0415 (82-130)||(13809-13857)
[»] scaffold0003 (1 HSPs)
scaffold0003 (62-124)||(312781-312843)
[»] scaffold0650 (1 HSPs)
scaffold0650 (4-113)||(1-109)
[»] scaffold0007 (2 HSPs)
scaffold0007 (102-132)||(77466-77496)
scaffold0007 (101-129)||(77344-77372)
[»] scaffold0002 (1 HSPs)
scaffold0002 (101-130)||(492303-492332)


Alignment Details
Target: chr3 (Bit Score: 402; Significance: 0; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 127 - 548
Target Start/End: Complemental strand, 38119181 - 38118760
Alignment:
Q  127 gtattatgaaaaaattgtaacaaattcgttggacacatattacagttatgaaagcatgcttataactatcatcttttagacttcctaaatcagatccctt 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38119181 gtattatgaaaaaattgtaacaaattcgttggacacatattacagttatgaaagcatgcttataactatcatcttttagacttcctaaatcagatccctt 38119082  T
Q  227 ataaatacttgaagactggaacaaggaattttaaaaggctcataaataatgaagaattatgtttgttatgtaacaccttttccttgatgaacaagcaact 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38119081 ataaatacttgaagactggaacaaggaattttaaaaggctcataaataatgaagaattatgtttgttatgtaacaccttttccttgatgaacaagcaact 38118982  T
Q  327 tttgcgatggtcgcagcagtcaataattttgcttacttagagctcacatcacattcatccatggggtcttatttactcatgccggatcaaattgtgtcac 426  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  38118981 tttgcgatggtcgcagcagtaaataattttgcttacttagagctcacatcacattcatcgacggggtcttatttactcatgccggatcaaattgtgtcac 38118882  T
Q  427 ttacatgtctttattcttgcatcagaatcctttagctacaaatcgggtcattgatagggatggctggctaaatactggtgacataggttgggttgctgcc 526  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  38118881 ttacatgtctttattcttgcatcagaatcctttagctacaaatcgggtcattgatagtgatggctggctaaatactggtgacataggttggattgctgcc 38118782  T
Q  527 caccattcaactggacggagtc 548  Q
    ||||||||||||||||||||||    
T  38118781 caccattcaactggacggagtc 38118760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 10297981 - 10298111
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  10297981 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 10298080  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    |||||||||||||||||||||||||||||||    
T  10298081 ttctcttataaataggaccggagggagtatt 10298111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 49823509 - 49823380
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  49823509 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 49823410  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  49823409 ttctcttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 51406675 - 51406804
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51406675 ctacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaa 51406774  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  51406775 ttctcttataaataggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 19557180 - 19557052
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19557180 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 19557081  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  19557080 ttctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 38964394 - 38964522
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  38964394 ctacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaa 38964493  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  38964494 ttctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 22721933 - 22722062
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  22721933 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 22722032  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    |||||||||||||||||||||| |||||||    
T  22722033 ttctcttataaataggaccggatggagtat 22722062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 8817514 - 8817382
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  8817514 ctaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 8817415  T
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    |||||||||||||||||||||| ||||||||||    
T  8817414 ttctcttataaataggaccggaaggagtattat 8817382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 34080158 - 34080030
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  34080158 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacaagatacatcaacttttgttgacccaaaa 34080059  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  34080058 ttctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 48340399 - 48340527
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||||||||||||| |||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  48340399 ctacctccggtcctatttacaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 48340498  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  48340499 ttctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 17653717 - 17653844
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  17653717 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 17653816  T
Q  104 tcttataaataggaccggagggagtatt 131  Q
    ||||||||||||||||||||| ||||||    
T  17653817 tcttataaataggaccggaggtagtatt 17653844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 37508926 - 37509052
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  37508926 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 37509025  T
Q  104 tcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||| |||||    
T  37509026 tcttataaataggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 40691120 - 40690994
Alignment:
Q  5 ctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattct 104  Q
    |||||||||||||||||||| |||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  40691120 ctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 40691021  T
Q  105 cttataaataggaccggagggagtatt 131  Q
    |||||||||||||||||||||||||||    
T  40691020 cttataaataggaccggagggagtatt 40690994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 4238596 - 4238725
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  4238596 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaa 4238695  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    |||||||||||||||||||||||| |||||    
T  4238696 ttctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 8437427 - 8437556
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||  |||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  8437427 ctacctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgactcaaaa 8437526  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  8437527 ttctcttataaataggaccggagggagtat 8437556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 2787956 - 2787832
Alignment:
Q  5 ctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattct 104  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||    
T  2787956 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaattct 2787857  T
Q  105 cttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||    
T  2787856 cttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 21295454 - 21295326
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||    
T  21295454 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacctaaaa 21295355  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  21295354 ttctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 44785524 - 44785396
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  44785524 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 44785425  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    ||||||||||||||| |||||||| ||||    
T  44785424 ttctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 46208035 - 46208161
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||    
T  46208035 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacctaaaattc 46208134  T
Q  104 tcttataaataggaccggagggagtat 130  Q
    |||||||||||||||||||||||||||    
T  46208135 tcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 9111622 - 9111497
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  9111622 ctaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaa 9111523  T
Q  101 ttctcttataaataggaccggaggga 126  Q
    ||||||||||||||||||||||||||    
T  9111522 ttctcttataaataggaccggaggga 9111497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 42507483 - 42507358
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  42507483 ctacctccggtcctatttataatagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaaaa 42507384  T
Q  101 ttctcttataaataggaccggaggga 126  Q
    ||||||||||||||||||||||||||    
T  42507383 ttctcttataaataggaccggaggga 42507358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 42170474 - 42170341
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  42170474 ctacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggagtgaatttttaaccagatacatcaacttttgttgacccaaaa 42170375  T
Q  101 ttctcttataaataggaccggagggagtattatg 134  Q
    ||||||||||||||||||| || |||||| ||||    
T  42170374 ttctcttataaataggaccagatggagtactatg 42170341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 36095805 - 36095678
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  36095805 cctccggtcctatttataagataaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaattc 36095706  T
Q  104 tcttataaataggaccggagggagtatt 131  Q
    |||| |||||| |||||||| |||||||    
T  36095705 tcttgtaaataagaccggagtgagtatt 36095678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 6013461 - 6013336
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||| |||| |||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||| ||  | |||||||||||||||||||    
T  6013461 cctccagtccaatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataaatttacttttgttgacccaaaattc 6013362  T
Q  104 tcttataaataggaccggagggagta 129  Q
    ||||||||||||||||||||||||||    
T  6013361 tcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 35513482 - 35513603
Alignment:
Q  8 cggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctctt 107  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||  |||| |||| ||| |||||| ||    
T  35513482 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaccttttattgatccagaattctttt 35513581  T
Q  108 ataaataggaccggagggagta 129  Q
    |||||||||| |||||||||||    
T  35513582 ataaataggatcggagggagta 35513603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 418 - 548
Target Start/End: Complemental strand, 38129226 - 38129096
Alignment:
Q  418 ttgtgtcacttacatgtctttattcttgcatcagaatcctttagctacaaatcgggtcattgatagggatggctggctaaatactggtgacataggttgg 517  Q
    |||||||| |||||| ||| |||||||| |||||||||||| ||| ||||||| || ||| || | |||||||||||| |||||||||||||||||||||    
T  38129226 ttgtgtcagttacatatctctattcttgtatcagaatccttcagccacaaatcaggccatagacaaggatggctggctgaatactggtgacataggttgg 38129127  T
Q  518 gttgctgcccaccattcaactggacggagtc 548  Q
     |||||||| |||||||| ||||||||||||    
T  38129126 attgctgcctaccattcatctggacggagtc 38129096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 33943055 - 33942931
Alignment:
Q  6 tccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctc 105  Q
    |||| |||||||||||| | ||| |||| ||||| ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||  |||||    
T  33943055 tccgatcctatttataaaagaaagttaggtcaacaaaagttaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagtttctc 33942956  T
Q  106 ttataaataggaccggagggagtat 130  Q
    |||||||||||| ||| | ||||||    
T  33942955 ttataaataggatcggcgagagtat 33942931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 9213521 - 9213646
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||| | | ||||   ||||| |||||  |||||| |||| | | ||| |||| | ||||||||||||||||||||| ||| |||    
T  9213521 cctccggtcctatttataaaagacattttagtcaacaaaagttgatgtatctggactaattttataaccaaatacatcaatttttgttgacctaaatttc 9213620  T
Q  104 tcttataaataggaccggagggagta 129  Q
    ||| ||||||||||| ||||||||||    
T  9213621 tctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 45652128 - 45652066
Alignment:
Q  70 actagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    |||||||||||| |||||||||||| ||||  ||||||||||||||||| |||||||||||||    
T  45652128 actagatacatccatttttgttgactcaaatgtctcttataaataggactggagggagtatta 45652066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 9027197 - 9027140
Alignment:
Q  74 gatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    |||||||||| ||||||||||||||  || ||||||||||||||||||||||||||||    
T  9027197 gatacatcaacttttgttgacccaactttatcttataaataggaccggagggagtatt 9027140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 34988140 - 34988205
Alignment:
Q  64 tttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||| | |||||||| ||||  | ||||||||||||||||||||||||||    
T  34988140 tttttaactagatacatcaactattgttgactcaaatatttcttataaataggaccggagggagta 34988205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 5323254 - 5323342
Alignment:
Q  47 aatgtatttggattgaattttt-aactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtattatg 134  Q
    |||||||||| ||||||||||| ||| | ||||||||| ||||||||||||||| ||  ||||||||||| | ||||||||||| ||||    
T  5323254 aatgtatttgaattgaattttttaaccaaatacatcaacttttgttgacccaaattttacttataaatagtatcggagggagtaatatg 5323342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 8092595 - 8092684
Alignment:
Q  6 tccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacc 95  Q
    ||||||||||||||||||| ||| ||  ||||||||||||  |||||| | || | |||||||||| ||||||||||| || ||||||||    
T  8092595 tccggtcctatttataagagaaaattgaatcaactaaagttgatgtatctcgactaaatttttaaccagatacatcaacttctgttgacc 8092684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 34381529 - 34381464
Alignment:
Q  67 ttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||||||||||||  |   || |||||||||||| ||||||||||||||||    
T  34381529 ttaactagatacatcaatttttgttgacaaatttttttcttataaatagaaccggagggagtatta 34381464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 46208074 - 46208029
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  46208074 ttttgttgacctaaatttctcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 2131746 - 2131802
Alignment:
Q  73 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| |||||||||||||||  ||||| |||| |||||||||||||||||    
T  2131746 agatacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagta 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 4238638 - 4238590
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  4238638 ttttgttgacctaaatttctcttataaataggaccggaggtagtattat 4238590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 17653756 - 17653712
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||    
T  17653756 ttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 22721975 - 22721927
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  22721975 ttttgttgacctaaatttctcttataaataggaccggaggtagtattat 22721927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 37508965 - 37508921
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||    
T  37508965 ttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 43323072 - 43323144
Alignment:
Q  11 tcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaa 83  Q
    |||||||||||||||||| || | ||||| |||||  ||||||||||||| |||||||||| | |||||||||    
T  43323072 tcctatttataagaaaaaattgggtcaacaaaagttgatgtatttggattaaatttttaaccaaatacatcaa 43323144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 9213641 - 9213514
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||| ||||||||||| ||| |||||||| ||||| ||| |  |||||||||| |  ||  ||   | ||||||||||| ||||||||||  |||  ||    
T  9213641 cctcccgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaaatgtc 9213542  T
Q  104 tcttataaataggaccggagggagtatt 131  Q
    | ||||||||||||||||||||||||||    
T  9213541 ttttataaataggaccggagggagtatt 9213514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 21295412 - 21295459
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  21295412 ttttgttgacctaaatttctcttataaataggaccggaggtagtatta 21295459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 34080116 - 34080163
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  34080116 ttttgttgacctaaatttctcttataaataggaccggaggtagtatta 34080163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 44785482 - 44785528
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  44785482 ttttgttgacctaaatttctcttataaataggaccggaggtagtatt 44785528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 19557138 - 19557183
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  19557138 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 34988131 - 34988074
Alignment:
Q  73 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||| ||||| |||||||||||||||  ||||| ||||||||||||| |||||||||    
T  34988131 agatagatcaacttttgttgacccaaatgtctctaataaataggaccgaagggagtat 34988074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 36095766 - 36095811
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| || |||||||||||||||||||||||||||    
T  36095766 ttttgttgacctaaatttatcttataaataggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 49823467 - 49823512
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  49823467 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 2787918 - 2787966
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| |||||||||||||||||||||||  ||||||||    
T  2787918 ttttgttgacctaaatttctcttataaataggaccggagatagtattat 2787966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 10298023 - 10297979
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  10298023 ttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 35513517 - 35513473
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||||    
T  35513517 ttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 38964436 - 38964388
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||||||||    
T  38964436 ttttgttgatctaaatttctcttataaataggaccggaggtagtattat 38964388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 8437469 - 8437422
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    |||| |||||| ||| |||||||||||||||||||||||| |||||||    
T  8437469 ttttattgacctaaatttctcttataaataggaccggaggtagtatta 8437422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 26019604 - 26019478
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||| || |||||||||||| ||| || | | ||| ||||| ||||||| | || | |||||| ||| |||||||| || ||| ||||||| ||  |||    
T  26019604 cctccagttctatttataagagaaagttgggttaac-aaagttaatgtatcttgactaaattttgaaccagatacataaactttggttgaccaaattttc 26019506  T
Q  104 tcttataaataggaccggagggagtatt 131  Q
    |||||||||||||| |||| ||||||||    
T  26019505 tcttataaataggatcggaaggagtatt 26019478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 42170432 - 42170479
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||| ||| |||||||||||||| ||||||||| |||||||    
T  42170432 ttttgttgacctaaatttctcttataaataagaccggaggtagtatta 42170479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 42507441 - 42507488
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||| ||| |||| ||||||||||||||||||| |||||||    
T  42507441 ttttgttgacctaaatttctattataaataggaccggaggtagtatta 42507488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 8817472 - 8817518
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||| ||| ||||||    
T  8817472 ttttgttgacctaaatttctcttataaataggaccgaaggtagtatt 8817518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 9111580 - 9111626
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||| ||| ||||||    
T  9111580 ttttgttgacctaaatttctcttataaataggaccgaaggtagtatt 9111626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 42299637 - 42299698
Alignment:
Q  71 ctagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||  | ||||||||| ||||  |||||||||||||| || ||||||||||||||    
T  42299637 ctagatacattgagttttgttgatccaactttctcttataaatacgatcggagggagtatta 42299698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 132
Target Start/End: Complemental strand, 21662910 - 21662882
Alignment:
Q  104 tcttataaataggaccggagggagtatta 132  Q
    |||||||||||||||||||||||||||||    
T  21662910 tcttataaataggaccggagggagtatta 21662882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 130
Target Start/End: Original strand, 40215022 - 40215050
Alignment:
Q  102 tctcttataaataggaccggagggagtat 130  Q
    |||||||||||||||||||||||||||||    
T  40215022 tctcttataaataggaccggagggagtat 40215050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 39
Target Start/End: Original strand, 45093582 - 45093610
Alignment:
Q  11 tcctatttataagaaaaatttagatcaac 39  Q
    |||||||||||||||||||||||||||||    
T  45093582 tcctatttataagaaaaatttagatcaac 45093610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 48340441 - 48340397
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  48340441 ttttgttgacctaaatttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 51406717 - 51406673
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  51406717 ttttgttgacctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 133
Target Start/End: Complemental strand, 51698141 - 51698109
Alignment:
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    ||||||| |||||||||||||||||||||||||    
T  51698141 ttctcttgtaaataggaccggagggagtattat 51698109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 132
Target Start/End: Complemental strand, 53441931 - 53441903
Alignment:
Q  104 tcttataaataggaccggagggagtatta 132  Q
    |||||||||||||||||||||||||||||    
T  53441931 tcttataaataggaccggagggagtatta 53441903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 4e-58; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 39571331 - 39571201
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  39571331 ctacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 39571232  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    |||||||||||||||||||||||||||||||    
T  39571231 ttctcttataaataggaccggagggagtatt 39571201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 7785906 - 7785775
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  7785906 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 7785807  T
Q  101 ttctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||||||||||||||||    
T  7785806 ttctcttataaataggaccggagggagtatta 7785775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 32114603 - 32114473
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32114603 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaa 32114504  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    || ||||||||||||||||||||||||||||    
T  32114503 ttttcttataaataggaccggagggagtatt 32114473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 32211491 - 32211361
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32211491 ctacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaa 32211392  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    |||||||||||||||||||||||||||||||    
T  32211391 ttctcttataaataggaccggagggagtatt 32211361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 54740 - 54611
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  54740 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 54641  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  54640 ttctcttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 2890290 - 2890161
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  2890290 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 2890191  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  2890190 ttctcttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 6552657 - 6552785
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  6552657 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 6552756  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  6552757 ttctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 33289389 - 33289261
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  33289389 ctacctccggtcctatttataagagaaatttagatcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 33289290  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  33289289 ttctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 44498315 - 44498183
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  44498315 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaa 44498216  T
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    |||||||||||||||||||||||||||||||||    
T  44498215 ttctcttataaataggaccggagggagtattat 44498183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 7805827 - 7805696
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  7805827 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaa 7805728  T
Q  101 ttctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||||||||||||||||    
T  7805727 ttctcttataaataggaccggagggagtatta 7805696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 15888480 - 15888350
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15888480 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaa 15888381  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    ||||||||||||||| || ||||||||||||    
T  15888380 ttctcttataaatagaactggagggagtatt 15888350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 43199482 - 43199353
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  43199482 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaa 43199383  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  43199382 ttctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 3304406 - 3304278
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  3304406 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 3304307  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    || ||||||||||||||||||||||||||    
T  3304306 ttttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 7012173 - 7012303
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  7012173 ctacctccggtcctatttataagagaaatttagatcaacaaaagtgaatatatttggactgaatttttaactagatacatcaacttttgttgatccaaaa 7012272  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    |||||||||||||||||||||||| ||||||    
T  7012273 ttctcttataaataggaccggaggaagtatt 7012303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 12763782 - 12763652
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  12763782 ctacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 12763683  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    || ||||||||||||||||||||||||||||    
T  12763682 ttatcttataaataggaccggagggagtatt 12763652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 25601128 - 25600999
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||    
T  25601128 ctacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaaaa 25601029  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  25601028 ttctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 12343268 - 12343146
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  12343268 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaa 12343169  T
Q  101 ttctcttataaataggaccggag 123  Q
    |||||||||||||||||||||||    
T  12343168 ttctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 31654618 - 31654743
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  31654618 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattc 31654717  T
Q  104 tcttataaataggaccggagggagta 129  Q
    | ||||||||||||||||||| ||||    
T  31654718 ttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 13578859 - 13578988
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||| || |||||||||||| |||||||| ||||  |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  13578859 ctacctccagttctatttataagagaaatttaggtcaataaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaa 13578958  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    |||||||||||||| ||| ||| |||||||    
T  13578959 ttctcttataaatatgactggatggagtat 13578988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 27422239 - 27422324
Alignment:
Q  48 atgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| |||||||||||| ||||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  27422239 atgtatttggactgaatttttaaccagatacattcatttttgttgacccaaatttctcttataaataggaccgaagggagtattat 27422324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 8587175 - 8587301
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| ||| || | ||||| |||||  |||||||| || | |||||||||||||||||||||| |||| ||||| |||  |||    
T  8587175 cctccggtcctatttataagagaaagtttggtcaacaaaagttgatgtattttgactaaatttttaactagatacatcaacttttattgactcaagtttc 8587274  T
Q  104 tcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||||||||| |||||    
T  8587275 tcttataaataagaccggaggaagtat 8587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 33057599 - 33057725
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| ||| || ||||||| ||| |   |||||  ||| |||| ||||||| ||||||||||||||||||||||| ||  |||    
T  33057599 cctccggtcctatttataagacaaagttggatcaacaaaaattgttgtatccggagtgaaattttaaccagatacatcaatttttgttgaccaaactttc 33057698  T
Q  104 tcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||||||| |||||||    
T  33057699 tcttataaataagaccggatggagtat 33057725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 28463614 - 28463742
Alignment:
Q  2 tacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaat 101  Q
    ||||||||||||||||||||||| ||| || | ||||| |||||  ||||||||||| |||||||| ||| ||||| ||||| ||| | |||||||| ||    
T  28463614 tacctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatttggactgaattttgaaccagatatatcaactttcggtgacccaatat 28463713  T
Q  102 tctcttataaataggaccggagggagtat 130  Q
    |||   |||||||||| ||||||||||||    
T  28463714 tctgcaataaataggatcggagggagtat 28463742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 24692096 - 24691986
Alignment:
Q  11 tcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttata 110  Q
    |||||||||||||||||| |||| ||||| |||||  |||||| || | |||||||| ||| ||||| ||||| ||||||||||||||| |||| ||| |    
T  24692096 tcctatttataagaaaaagttaggtcaacaaaagttgatgtatctgaactgaatttt-aaccagatatatcaacttttgttgacccaaatttcttttaaa 24691998  T
Q  111 aataggaccgga 122  Q
    ||||||||||||    
T  24691997 aataggaccgga 24691986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4245709 - 4245652
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttgga 58  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  4245709 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgga 4245652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 33057649 - 33057590
Alignment:
Q  74 gatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    |||||| ||||||||||||| ||||  || ||||||||||||||||||||||||||||||    
T  33057649 gatacaacaatttttgttgatccaactttgtcttataaataggaccggagggagtattat 33057590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 8587224 - 8587170
Alignment:
Q  75 atacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||| ||||||||||| ||  |||||||||||||||||||||||||||||    
T  8587224 atacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 438 - 548
Target Start/End: Original strand, 35111244 - 35111354
Alignment:
Q  438 tattcttgcatcagaatcctttagctacaaatcgggtcattgatagggatggctggctaaatactggtgacataggttgggttgctgcccaccattcaac 537  Q
    |||| |||||| ||||||| ||||||||||| | || | | |||| |||||||||||| |||||||||||  |||| ||| ||||| |||| ||||| ||    
T  35111244 tattattgcattagaatccattagctacaaaccaggccttggataaggatggctggctgaatactggtgatctagggtggattgctccccatcattctac 35111343  T
Q  538 tggacggagtc 548  Q
    ||| |||||||    
T  35111344 tgggcggagtc 35111354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 28463665 - 28463616
Alignment:
Q  75 atacatcaatttttgttgacccaaaattctcttataaataggaccggagg 124  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  28463665 atacatcaacttttgttgacccaactttctcttataaataggaccggagg 28463616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 54698 - 54746
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  54698 ttttgttgacctaaatttctcttataaataggaccggaggtagtattat 54746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 31654657 - 31654613
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||    
T  31654657 ttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 2890248 - 2890295
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  2890248 ttttgttgacctaaatttctcttataaataggaccggaggtagtatta 2890295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 32211447 - 32211494
Alignment:
Q  83 atttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  32211447 atttttgttgacctaaatttctcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 35564757 - 35564706
Alignment:
Q  62 aatttttaactagatacatcaatttttgttgacccaaaattctcttataaat 113  Q
    |||||| ||||||||||||||| |||||||||| ||||| ||||||||||||    
T  35564757 aattttgaactagatacatcaaattttgttgactcaaaaatctcttataaat 35564706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 4245667 - 4245713
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  4245667 ttttgttgacctaaatttctcttataaataggaccggaggtagtatt 4245713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 7785864 - 7785910
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  7785864 ttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 7805785 - 7805831
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  7805785 ttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 17006916 - 17007026
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    |||||| |||||||||||||| ||| || | ||||| |||||  ||| || |||| |||||| ||||  ||||||||||| |||| |||||  ||| |||    
T  17006916 cctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttc 17007015  T
Q  104 tcttataaata 114  Q
    |||||||||||    
T  17007016 tcttataaata 17007026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 17570331 - 17570221
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    |||||| |||||||||||||| ||| || | ||||| |||||  ||| || |||| |||||| ||||  ||||||||||| |||| |||||  ||| |||    
T  17570331 cctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatcaacttttattgactaaaatttc 17570232  T
Q  104 tcttataaata 114  Q
    |||||||||||    
T  17570231 tcttataaata 17570221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 17006967 - 17006914
Alignment:
Q  73 agatacatcaatttttgttgacccaaaattctcttataaataggaccggaggga 126  Q
    |||| |||||| ||||||||||||||  ||||||||||||||||| ||||||||    
T  17006967 agatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 17570280 - 17570333
Alignment:
Q  73 agatacatcaatttttgttgacccaaaattctcttataaataggaccggaggga 126  Q
    |||| |||||| ||||||||||||||  ||||||||||||||||| ||||||||    
T  17570280 agatccatcaacttttgttgacccaactttctcttataaataggatcggaggga 17570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 43199440 - 43199485
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  43199440 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 43199485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 3304364 - 3304408
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3304364 ttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 6552699 - 6552655
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6552699 ttttgttgacctaaatttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 12343226 - 12343270
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  12343226 ttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 15688086 - 15688038
Alignment:
Q  73 agatacatcaatttttgttgacccaaaattctcttataaataggaccgg 121  Q
    ||||||||||| ||||||||||||||  |||||||||||| ||||||||    
T  15688086 agatacatcaacttttgttgacccaactttctcttataaacaggaccgg 15688038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 15888438 - 15888482
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15888438 ttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 30171535 - 30171483
Alignment:
Q  76 tacatcaatttttgttgacccaaaattctcttataaataggaccggagggagt 128  Q
    ||||| || |||||||||| |||||||||||| ||||||||| ||||||||||    
T  30171535 tacattaacttttgttgactcaaaattctcttgtaaataggatcggagggagt 30171483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 32114561 - 32114605
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  32114561 ttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 44498273 - 44498317
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44498273 ttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 6899421 - 6899452
Alignment:
Q  1 ctacctccggtcctatttataagaaaaattta 32  Q
    ||||||||||||||||||||||||||||||||    
T  6899421 ctacctccggtcctatttataagaaaaattta 6899452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 13246888 - 13246801
Alignment:
Q  35 tcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccgga 122  Q
    ||||| |||||  |||||| |||| ||||||||||   | ||||||  ||||||||||| ||||| ||||||||||||||||| ||||    
T  13246888 tcaacaaaagttcatgtatctggactgaatttttagtcaaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 13246801 - 13246851
Alignment:
Q  6 tccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttg 56  Q
    |||| |||||||||||||| |||||| ||||||| ||| ||||||||||||    
T  13246801 tccgatcctatttataagagaaatttggatcaacaaaaatgaatgtatttg 13246851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 24692052 - 24692110
Alignment:
Q  73 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||||||||||| ||  || |||||||||||||| || ||||||||||    
T  24692052 agatacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtatt 24692110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 12763740 - 12763785
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  12763740 ttttgttgacctaaatttctcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 25601086 - 25601131
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| ||||||||||||||||| |||||| |||||    
T  25601086 ttttgttgacctaaatttctcttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 5031468 - 5031496
Alignment:
Q  4 cctccggtcctatttataagaaaaattta 32  Q
    |||||||||||||||||||||||||||||    
T  5031468 cctccggtcctatttataagaaaaattta 5031496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 7012215 - 7012171
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||||    
T  7012215 ttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 33289350 - 33289394
Alignment:
Q  88 tgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    |||||| | ||| |||||||||||||||||||||||| |||||||    
T  33289350 tgttgatctaaatttctcttataaataggaccggaggtagtatta 33289394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 34028504 - 34028536
Alignment:
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    ||||||| |||||||||||||||||||||||||    
T  34028504 ttctcttgtaaataggaccggagggagtattat 34028536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 39571289 - 39571333
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||||    
T  39571289 ttttgttgatctaaatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 102 - 130
Target Start/End: Complemental strand, 41915620 - 41915592
Alignment:
Q  102 tctcttataaataggaccggagggagtat 130  Q
    |||||||||||||||||||||||||||||    
T  41915620 tctcttataaataggaccggagggagtat 41915592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 4e-58; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 8099532 - 8099662
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8099532 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaa 8099631  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    |||||||||||||||||||||||||||||||    
T  8099632 ttctcttataaataggaccggagggagtatt 8099662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 35031129 - 35031000
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35031129 ctacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaa 35031030  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    |||||||||||||||||||||||| |||||    
T  35031029 ttctcttataaataggaccggaggaagtat 35031000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 26602325 - 26602456
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  26602325 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 26602424  T
Q  101 ttctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||||||||||||||||    
T  26602425 ttctcttataaataggaccggagggagtatta 26602456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 6068568 - 6068697
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  6068568 ctacctccggtcctatttataagaaaaatttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgactcaaaa 6068667  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  6068668 ttctcttataaataggaccggagggagtat 6068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 6330117 - 6330246
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  6330117 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 6330216  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  6330217 ttctcttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 11572273 - 11572144
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  11572273 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 11572174  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  11572173 ttctcttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 2830337 - 2830465
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  2830337 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 2830436  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  2830437 ttctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 8383097 - 8382969
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  8383097 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 8382998  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  8382997 ttctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 13853721 - 13853592
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  13853721 ctaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 13853622  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  13853621 ttctcttataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 9644698 - 9644828
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| |||||  || |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  9644698 ctacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 9644797  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    |||||||||||||||||||||||||||||||    
T  9644798 ttctcttataaataggaccggagggagtatt 9644828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 9650715 - 9650845
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| |||||  || |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  9650715 ctacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 9650814  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    |||||||||||||||||||||||||||||||    
T  9650815 ttctcttataaataggaccggagggagtatt 9650845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 33052922 - 33052792
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  33052922 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaa 33052823  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    |||||||||||||||||||||| ||||||||    
T  33052822 ttctcttataaataggaccggatggagtatt 33052792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 8417918 - 8417793
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    |||| |||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8417918 cctctggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattc 8417819  T
Q  104 tcttataaataggaccggagggagta 129  Q
    ||||||||||||||||| ||||||||    
T  8417818 tcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 6143556 - 6143684
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  6143556 ctacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgtcccaaaa 6143655  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    ||||||||||||||| |||||| ||||||    
T  6143656 ttctcttataaatagaaccggaaggagta 6143684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 28747248 - 28747133
Alignment:
Q  15 atttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaata 114  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  28747248 atttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaattctcttataaata 28747149  T
Q  115 ggaccggagggagtat 130  Q
    |||| | |||||||||    
T  28747148 ggactgaagggagtat 28747133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 17992030 - 17992118
Alignment:
Q  41 aaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  17992030 aaagtgaatgtatttggattgaatttttaactagatacatcgatttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 13043760 - 13043850
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgtt 91  Q
    ||||||||||| |||||||||||| |||||||| ||||| ||| |||||||||||| |||||||||||||||||||||||||| |||||||    
T  13043760 ctacctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttgaattgaatttttaactagatacatcaacttttgtt 13043850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 22896513 - 22896593
Alignment:
Q  50 gtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||| ||||||||    
T  22896513 gtatttggactgaatttttaactagatacatcaacttttgttgacaaaaaattctcttataaataggaccggcgggagtat 22896593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 3788093 - 3788168
Alignment:
Q  55 tggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    |||| |||||| ||||||| ||||||||| ||||||||||| ||| || ||||||||||| |||||||||||||||    
T  3788093 tggactgaattgttaactaaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 14936582 - 14936456
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    |||| |||||||||||||||| | |||| | ||||| | |||  |||||||||||   |||| ||||||||||||||||  ||||||||||| |||  |     
T  14936582 cctctggtcctatttataagagatatttgggtcaacaatagttgatgtatttggaacaaattcttaactagatacatcaccttttgttgacctaaatgtt 14936483  T
Q  104 tcttataaataggaccggagggagtat 130  Q
    |||| || |||||||| ||||||||||    
T  14936482 tcttctatataggaccagagggagtat 14936456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 7597046 - 7596977
Alignment:
Q  60 tgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    |||||||||||||| ||||||||| |||| ||||| |||| ||||| |||||||||||  ||||||||||    
T  7597046 tgaatttttaactaaatacatcaacttttattgactcaaatttctcctataaataggattggagggagta 7596977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 6069062 - 6068974
Alignment:
Q  7 ccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacc 95  Q
    |||||||||||||||| | | |||||| ||||| ||||| |||||||||||  | ||||||||||| ||||| |||  |||||||||||    
T  6069062 ccggtcctatttataaaagatatttaggtcaacaaaagttaatgtatttggtctaaatttttaactcgatacttcatcttttgttgacc 6068974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 8186441 - 8186497
Alignment:
Q  73 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||||||||| ||||| |||| |||||||||||||||| |||||||    
T  8186441 agatacatcaacttttgttgatccaaatttcttttataaataggaccggggggagta 8186497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 8383055 - 8383102
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  8383055 ttttgttgacctaaatttctcttataaataggaccggaggtagtatta 8383102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 33052880 - 33052926
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  33052880 ttttgttgacctaaatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 2830379 - 2830334
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  2830379 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 8099574 - 8099529
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  8099574 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 11572231 - 11572276
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  11572231 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 14936533 - 14936590
Alignment:
Q  75 atacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||| | |||||||||||||  |||||||||||||||||| |||||| |||||    
T  14936533 atacatcaactattgttgacccaaatatctcttataaataggaccagagggattatta 14936590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 22896512 - 22896471
Alignment:
Q  88 tgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  22896512 tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 6330159 - 6330115
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6330159 ttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 6549902 - 6549997
Alignment:
Q  18 tataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaata 114  Q
    ||||||| |||||||| ||||| ||||| |||||||||| ||  || |||  |||||||||||||| ||||||| ||| |||  |||||||||||||    
T  6549902 tataagagaaatttaggtcaacaaaagttaatgtatttg-atgaaaatttggactagatacatcaacttttgttaaccaaaatatctcttataaata 6549997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 8417879 - 8417927
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| |||||||||||||| |||| |||||||||||||    
T  8417879 ttttgttgacctaaatttctcttataaataagaccagagggagtattat 8417927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 13853679 - 13853727
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| |||||||||||||||||||| ||| ||||||||    
T  13853679 ttttgttgacctaaatttctcttataaataggaccgaaggtagtattat 13853727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 26602367 - 26602323
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  26602367 ttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 9644742 - 9644696
Alignment:
Q  83 atttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    |||| |||||||| ||| |||||||||||||||||||||||| ||||    
T  9644742 atttatgttgacctaaatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 9650759 - 9650713
Alignment:
Q  83 atttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    |||| |||||||| ||| |||||||||||||||||||||||| ||||    
T  9650759 atttatgttgacctaaatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 13043804 - 13043758
Alignment:
Q  83 atttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  13043804 atttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 6143598 - 6143553
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| ||||||||||||||||| |||||| |||||    
T  6143598 ttttgttgacctaaatttctcttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 35031087 - 35031132
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| || ||||||||||||||||||||| |||||    
T  35031087 ttttgttgacctaaatttttcttataaataggaccggaggtagtat 35031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 6068610 - 6068562
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    |||| |||||| ||| || ||||||||||||||||||||| ||||||||    
T  6068610 ttttattgacctaaatttttcttataaataggaccggaggtagtattat 6068562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 133
Target Start/End: Complemental strand, 24949658 - 24949626
Alignment:
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    ||||||| |||||||||||||||||||||||||    
T  24949658 ttctcttgtaaataggaccggagggagtattat 24949626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 140
Target Start/End: Original strand, 25537974 - 25538010
Alignment:
Q  104 tcttataaataggaccggagggagtattatgaaaaaa 140  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  25537974 tcttataaataggaccggtgggagtattataaaaaaa 25538010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 31849634 - 31849586
Alignment:
Q  75 atacatcaatttttgttgacccaaaattctcttataaataggaccggag 123  Q
    ||||||||| ||||||||||||| |  ||||||||||||| ||||||||    
T  31849634 atacatcaacttttgttgacccatatgtctcttataaatatgaccggag 31849586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 33393213 - 33393165
Alignment:
Q  62 aatttttaactagatacatcaatttttgttgacccaaaattctcttata 110  Q
    |||||| ||||||||||||||| |||| ||||| |||| ||||||||||    
T  33393213 aattttaaactagatacatcaacttttattgactcaaatttctcttata 33393165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 6e-57; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 7240751 - 7240883
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  7240751 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 7240850  T
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    |||||||||||||||||||||||||||||||||    
T  7240851 ttctcttataaataggaccggagggagtattat 7240883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 1738575 - 1738444
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  1738575 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 1738476  T
Q  101 ttctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||||||||||||||||    
T  1738475 ttctcttataaataggaccggagggagtatta 1738444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 7482227 - 7482359
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  7482227 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaa 7482326  T
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    |||||||||||||||||||||||||||||||||    
T  7482327 ttctcttataaataggaccggagggagtattat 7482359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 46840862 - 46840990
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  46840862 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 46840961  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  46840962 ttctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 38064041 - 38063910
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  38064041 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 38063942  T
Q  101 ttctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||| ||||||||||||    
T  38063941 ttctcttataaataggaccagagggagtatta 38063910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 9268758 - 9268887
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  9268758 ctacctctggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 9268857  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  9268858 ttctcttataaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 23314267 - 23314139
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  23314267 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaaaa 23314168  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  23314167 ttctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 31319527 - 31319399
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  31319527 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 31319428  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    ||||||||||||||| |||||||||||||    
T  31319427 ttctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 36583397 - 36583528
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||    
T  36583397 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacttaatttttaactagatacatcaacttttgttgacccaaaa 36583496  T
Q  101 ttctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||| ||||||||||||||    
T  36583497 ttctcttataaataggatcggagggagtatta 36583528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 1565857 - 1565728
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  1565857 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 1565758  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||| |||| |||||||||    
T  1565757 ttctcttataaatagaaccgaagggagtat 1565728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 22285704 - 22285829
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  22285704 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattc 22285803  T
Q  104 tcttataaataggaccggagggagta 129  Q
    ||||||||||||||||||||||||||    
T  22285804 tcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 28536879 - 28536750
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||| |||| ||||||    
T  28536879 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggaatgaatttttaactagatacatcaacttttattgatccaaaa 28536780  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  28536779 ttctcttataaataggaccggagggagtat 28536750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 4790250 - 4790379
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| | |||||||||||||||||||||| |||| |||||||||||    
T  4790250 ctacctccggtcctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactaaatttttaactagatacatcaacttttattgacccaaaa 4790349  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    |||||||||||||||||||||||| |||||    
T  4790350 ttctcttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 94442 - 94318
Alignment:
Q  5 ctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattct 104  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  94442 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaaattct 94343  T
Q  105 cttataaataggaccggagggagta 129  Q
    ||||||||||||| |||||||||||    
T  94342 cttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 38441462 - 38441590
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||  ||||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  38441462 ctacctccggtcctatttataagagaaatttatgtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaa 38441561  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||| ||||    
T  38441562 ttctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 36016321 - 36016196
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  36016321 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattc 36016222  T
Q  104 tcttataaataggaccggagggagta 129  Q
    |||||||||||||||| || ||||||    
T  36016221 tcttataaataggaccagatggagta 36016196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 33418392 - 33418500
Alignment:
Q  15 atttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaata 114  Q
    |||| ||||| |||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  33418392 atttttaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattctcttataaata 33418491  T
Q  115 ggaccggag 123  Q
    |||||||||    
T  33418492 ggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 9575414 - 9575539
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    |||| |||||||||| ||||| ||| || | ||||| ||||| || |||||| || |||||||||||||||||||||||| ||||||||||| ||  |||    
T  9575414 cctctggtcctatttgtaagagaaagttgggtcaacaaaagttaacgtatttagactgaatttttaactagatacatcaagttttgttgaccaaactttc 9575513  T
Q  104 tcttataaataggaccggagggagta 129  Q
    ||||||||||||||||| ||||||||    
T  9575514 tcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 40840243 - 40840126
Alignment:
Q  5 ctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattct 104  Q
    ||||||||||||||| |||| ||| |||  | ||| ||| | |||||||||||| ||||||||||||||  |||||||| ||||||||||  ||| ||||    
T  40840243 ctccggtcctatttagaagagaaagttaagttaacaaaaatcaatgtatttggactgaatttttaactaagtacatcaacttttgttgacaaaaatttct 40840144  T
Q  105 cttataaataggaccgga 122  Q
    ||||||||||||||||||    
T  40840143 cttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 7269530 - 7269412
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||| ||||||||||||||| || | ||||| ||| |  |||||| |  | |||||||||||| |||| |||||| ||||||| ||||||  |||    
T  7269530 cctccggtcttatttataagaaaaagttgggtcaacaaaaattgatgtatctaaactgaatttttaaccagatgcatcaacttttgttaacccaactttc 7269431  T
Q  104 tcttataaataggaccgga 122  Q
    |||||||||||||||||||    
T  7269430 tcttataaataggaccgga 7269412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 7269478 - 7269535
Alignment:
Q  72 tagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||  || ||||||||||| ||||||||||||||    
T  7269478 tagatacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 7661147 - 7661207
Alignment:
Q  70 actagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    |||||||||||||| |||||||||||||||  |||| ||||||||||||| ||||||||||    
T  7661147 actagatacatcaacttttgttgacccaaatgtctcatataaataggaccagagggagtat 7661207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 22285743 - 22285695
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  22285743 ttttgttgacctaaatttctcttataaataggaccggagggagtattat 22285695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 1738533 - 1738581
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  1738533 ttttgttgacctaaatttctcttataaataggaccggaggtagtattat 1738581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 7240793 - 7240745
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  7240793 ttttgttgacctaaatttctcttataaataggaccggaggtagtattat 7240745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 36016282 - 36016326
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||    
T  36016282 ttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 1565815 - 1565861
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  1565815 ttttgttgacctaaatttctcttataaataggaccggaggtagtatt 1565861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 46840904 - 46840858
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  46840904 ttttgttgacctaaatttctcttataaataggaccggaggtagtatt 46840858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 7482269 - 7482224
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  7482269 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 7482224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 28536837 - 28536882
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  28536837 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 38063999 - 38064044
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  38063999 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 39019893 - 39019840
Alignment:
Q  64 tttttaactagatacatcaatttttgttgacccaaaattctcttataaatagga 117  Q
    |||| ||||||||||||||||||||||||| |||||   |||||||||||||||    
T  39019893 ttttgaactagatacatcaatttttgttgatccaaatgcctcttataaatagga 39019840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 9268800 - 9268752
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| ||||||||||||||||||| |||| ||||||||    
T  9268800 ttttgttgacctaaatttctcttataaataggaccagaggtagtattat 9268752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 23314225 - 23314269
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23314225 ttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 31319485 - 31319529
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  31319485 ttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 36583439 - 36583395
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  36583439 ttttgttgacctaaatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 4790294 - 4790247
Alignment:
Q  83 atttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||||| ||| || ||||||||||||||||||||| |||||    
T  4790294 atttttgttgacctaaatttttcttataaataggaccggaggtagtat 4790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 29993302 - 29993251
Alignment:
Q  71 ctagatacatcaatttttgttgacccaaaattctcttataaataggaccgga 122  Q
    ||||||| || || |||||||||||||| ||||||||| |||||||||||||    
T  29993302 ctagatatattaacttttgttgacccaacattctcttacaaataggaccgga 29993251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 94404 - 94442
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggag 123  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  94404 ttttgttgacctaaatttctcttataaataggaccggag 94442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 9575453 - 9575407
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||||||  |||||||| |||||||||| |||||||||||    
T  9575453 ttttgttgacccaactttctcttacaaataggaccagagggagtatt 9575407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 46877665 - 46877719
Alignment:
Q  74 gatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagt 128  Q
    ||||||| || ||||||||||||||  |||||||||| ||||||||||| |||||    
T  46877665 gatacattaacttttgttgacccaactttctcttatatataggaccggatggagt 46877719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 3411448 - 3411485
Alignment:
Q  96 caaaattctcttataaataggaccggagggagtattat 133  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  3411448 caaatttctcttataaataggatcggagggagtattat 3411485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 130
Target Start/End: Complemental strand, 5347750 - 5347721
Alignment:
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  5347750 ttctcttataaataggaccggagggagtat 5347721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 24710745 - 24710802
Alignment:
Q  75 atacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||| |||||||||||||    ||| ||||||| |||||||||||||||||||    
T  24710745 atacatcaacttttgttgacccagttgtcttttataaaaaggaccggagggagtatta 24710802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 36033297 - 36033241
Alignment:
Q  58 attgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaata 114  Q
    ||||||||||| |  ||||||||||| ||||||||||| ||| || |||||||||||    
T  36033297 attgaatttttgatcagatacatcaacttttgttgacctaaatttatcttataaata 36033241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 38441504 - 38441460
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||  ||| |||||||||||||||||||||||| ||||    
T  38441504 ttttgttgacataaatttctcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 6e-57; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 9395352 - 9395484
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  9395352 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 9395451  T
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    |||||||||||||||||||||||||||||||||    
T  9395452 ttctcttataaataggaccggagggagtattat 9395484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 41989535 - 41989405
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  41989535 ctacctccggtcctatttgtaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 41989436  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    |||||||||||||||||||||||||||||||    
T  41989435 ttctcttataaataggaccggagggagtatt 41989405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 13103029 - 13103158
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  13103029 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattc 13103128  T
Q  104 tcttataaataggaccggagggagtattat 133  Q
    ||||||||||||||||||||||||||||||    
T  13103129 tcttataaataggaccggagggagtattat 13103158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 36563666 - 36563537
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  36563666 ctacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 36563567  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  36563566 ttctcttataaataggaccggagggagtat 36563537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 37149083 - 37148955
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  37149083 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 37148984  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||| ||||||||||||||||||||||||    
T  37148983 ttctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 11795170 - 11795299
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  11795170 ctacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 11795269  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    |||||||||||||||||| |||||||||||    
T  11795270 ttctcttataaataggactggagggagtat 11795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 13033056 - 13033185
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  13033056 cctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgacccaaaattc 13033155  T
Q  104 tcttataaataggaccggagggagtattat 133  Q
    |||||||||||||| |||||||||||||||    
T  13033156 tcttataaataggatcggagggagtattat 13033185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 20848076 - 20848203
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  20848076 ctacctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttg-cccaaaa 20848174  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  20848175 ttctcttataaataggaccggagggagta 20848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 23359944 - 23360072
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  23359944 ctacctctggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 23360043  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||| ||||    
T  23360044 ttctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 17025626 - 17025755
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| || || |||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||    
T  17025626 ctacctccggtcctatttataagagaaatttaggtccacaaaagtgaatgtatttaaactgaatttttaactagatacatcaacttttgttgacccaaaa 17025725  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  17025726 ttctcttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 37641955 - 37642085
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaa-gtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaa 99  Q
    |||||||||||||||||||||||| |||||||| ||||  ||| |||||||||| |||| |||||||||||||||||||||||| |||| ||||||||||    
T  37641955 ctacctccggtcctatttataagagaaatttaggtcaataaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttattgacccaaa 37642054  T
Q  100 attctcttataaataggaccggagggagtat 130  Q
    |||||||||||||||||||||||||||||||    
T  37642055 attctcttataaataggaccggagggagtat 37642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 26350475 - 26350348
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    |||||| |||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||| ||||  ||||||||    
T  26350475 cctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgattcaaaattc 26350376  T
Q  104 tcttataaataggaccggagggagtatt 131  Q
    | ||||||||||||||||||||||||||    
T  26350375 ttttataaataggaccggagggagtatt 26350348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 6126845 - 6126954
Alignment:
Q  20 taagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggacc 119  Q
    ||||| |||||||||||||| ||| |||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6126845 taagagaaatttagatcaacaaaaatgaatgtatttggactaaatttttaactagatacatcaacttttgttgacccaaaattctcttataaataggacc 6126944  T
Q  120 ggagggagta 129  Q
    ||||||||||    
T  6126945 ggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 582991 - 583118
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  582991 ctacctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 583090  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||| ||||  |||||| |||||||||||    
T  583091 ttcttttat-tataggatcggagggagta 583118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 21575973 - 21576077
Alignment:
Q  26 aaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggaggg 125  Q
    |||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  21575973 aaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgatccaaaattctcttataaataggaccggaggg 21576072  T
Q  126 agtat 130  Q
    |||||    
T  21576073 agtat 21576077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 4443969 - 4444087
Alignment:
Q  8 cggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctctt 107  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||||| || ||||||||||| |||||||||||| ||||||||| | |||||||||||    
T  4443969 cggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaaatagatacatcaacttttgttgatctaaaattctctt 4444068  T
Q  108 ataaataggaccggaggga 126  Q
    ||||||| |||||||||||    
T  4444069 ataaataagaccggaggga 4444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 966157 - 966281
Alignment:
Q  8 cggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctctt 107  Q
    |||||||||||| |||| ||| ||  |||||| | |||  |||||| | || |||||||||||| ||||||||  ||||||||||| ||||| |||||||    
T  966157 cggtcctatttacaagagaaagttgaatcaacaacagttcatgtatcttgactgaatttttaaccagatacattcatttttgttgatccaaatttctctt 966256  T
Q  108 ataaataggaccggagggagtatta 132  Q
    ||||||||||| |||||| ||||||    
T  966257 ataaataggactggagggggtatta 966281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 38361816 - 38361743
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagata 77  Q
    |||||| |||||||||||||| |||||||| ||||  |||||||||||||||||| ||||||||||| ||||||    
T  38361816 cctccgatcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaaatagata 38361743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 36595856 - 36595782
Alignment:
Q  47 aatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccgg 121  Q
    ||||||| | || |||||||||||  ||||||||||||||||||||||| ||  |||||||||||||| ||||||    
T  36595856 aatgtatctagactgaatttttaatcagatacatcaatttttgttgacctaactttctcttataaataagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 9006949 - 9006885
Alignment:
Q  62 aatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggaggga 126  Q
    |||||| ||||||||||||||| ||||||||||| |||| ||| |||||||||||| | ||||||    
T  9006949 aattttgaactagatacatcaacttttgttgacctaaaagtctgttataaataggagcagaggga 9006885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 37149041 - 37149089
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  37149041 ttttgttgacctaaatttctcttataaataggaccggaggtagtattat 37149089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 115
Target Start/End: Complemental strand, 2366419 - 2366352
Alignment:
Q  48 atgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaatag 115  Q
    ||||||||||| |||| ||||||| | |||||| || | ||||||||||||| |||||||||||||||    
T  2366419 atgtatttggactgaaattttaaccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 3549553 - 3549663
Alignment:
Q  5 ctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattct 104  Q
    |||||||||||||||||||| ||||||| || ||| |||||  ||||||| || |  || |||  || |||||||| |||||||||||||  |||  |||    
T  3549553 ctccggtcctatttataagagaaatttatattaacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgactaaaatatct 3549652  T
Q  105 cttataaatag 115  Q
    |||||||||||    
T  3549653 cttataaatag 3549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 39290828 - 39290775
Alignment:
Q  75 atacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||  | |||||||||| |||||||||||||||||||    
T  39290828 atacatcaatttttgttgacctgatattctcttat-aataggaccggagggagta 39290775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 583030 - 582985
Alignment:
Q  88 tgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||||    
T  583030 tgttgacctaaatttctcttataaataggaccggaggtagtattat 582985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 7053768 - 7053809
Alignment:
Q  101 ttctcttataaataggaccggagggagtattatgaaaaaatt 142  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  7053768 ttctcttgtaaataggaccggagggagtattattaaaaaatt 7053809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 11574161 - 11574210
Alignment:
Q  80 tcaatttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    |||||||||||||||| |||  |||||||||||||||||||||| |||||    
T  11574161 tcaatttttgttgacctaaatgtctcttataaataggaccggagagagta 11574210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 13033095 - 13033050
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  13033095 ttttgttgacctaaatttctcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 13103068 - 13103023
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  13103068 ttttgttgacctaaatttctcttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 18167334 - 18167435
Alignment:
Q  14 tatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaat 113  Q
    |||| |||||| ||| |||||||||| ||| |  |||||| |||||| |||||||||  | |||| |||||||||||||||| ||  || ||||||||||    
T  18167334 tattaataagagaaagttagatcaacaaaaattgatgtatatggatttaatttttaatcaaatacgtcaatttttgttgaccaaactttttcttataaat 18167433  T
Q  114 ag 115  Q
    ||    
T  18167434 ag 18167435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 37641998 - 37641949
Alignment:
Q  84 tttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||| |||||| ||| |||||||||||||||||||||||| ||||||||    
T  37641998 tttttattgacctaaatttctcttataaataggaccggaggtagtattat 37641949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 2629669 - 2629561
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||| | ||||||||||| |||||| ||||| ||||| ||||||| ||   | | |||||||||| ||||||||| |||| ||||| ||||  |     
T  2629669 cctccggtcttgtttataagaaatatttaggtcaacaaaagttaatgtatctgatctaattttttaactatatacatcaaattttattgactcaaatgtt 2629570  T
Q  104 tcttataaa 112  Q
    |||||||||    
T  2629569 tcttataaa 2629561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 9395394 - 9395350
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9395394 ttttgttgacctaaatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 26350436 - 26350480
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||||    
T  26350436 ttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 39290823 - 39290891
Alignment:
Q  48 atgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaatagg 116  Q
    ||||||||||||| ||||||||| ||||||||| || |||||||||  | |  ||||||||||||||||    
T  39290823 atgtatttggattaaatttttaattagatacattaacttttgttgattcgactttctcttataaatagg 39290891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 13539947 - 13539986
Alignment:
Q  83 atttttgttgacccaaaattctcttataaataggaccgga 122  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  13539947 atttttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 20848118 - 20848071
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    |||| |||||| ||| |||||||||||||||||||||||| |||||||    
T  20848118 ttttattgacctaaatttctcttataaataggaccggaggtagtatta 20848071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 1643466 - 1643496
Alignment:
Q  102 tctcttataaataggaccggagggagtatta 132  Q
    |||||||||||||||||||||||||||||||    
T  1643466 tctcttataaataggaccggagggagtatta 1643496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 4444004 - 4443958
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||| ||| ||||||    
T  4444004 ttttgttgacctaaatttctcttataaataggaccgaaggaagtatt 4443958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 134
Target Start/End: Complemental strand, 13789756 - 13789726
Alignment:
Q  104 tcttataaataggaccggagggagtattatg 134  Q
    |||||||||||||||||||||||||||||||    
T  13789756 tcttataaataggaccggagggagtattatg 13789726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 17025668 - 17025622
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    |||||| |||| ||| |||||||||||||||||||||||| ||||||    
T  17025668 ttttgtggacctaaatttctcttataaataggaccggaggtagtatt 17025622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 36563624 - 36563670
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| ||||||||||||||||| |||||| ||||||    
T  36563624 ttttgttgacctaaatttctcttataaataggatcggaggtagtatt 36563670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 99 - 129
Target Start/End: Complemental strand, 38361743 - 38361713
Alignment:
Q  99 aattctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||||    
T  38361743 aattctcttataaataggaccggagggagta 38361713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 966273 - 966224
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtat 53  Q
    ||||| ||||||||||||||| |||||| ||||||| ||| |||||||||    
T  966273 cctccagtcctatttataagagaaatttggatcaacaaaaatgaatgtat 966224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 23359986 - 23359941
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| ||||||||||||||||||| |||| |||||    
T  23359986 ttttgttgacctaaatttctcttataaataggaccagaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 35904448 - 35904530
Alignment:
Q  48 atgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||| |||||||||||||| ||||||  | ||||||||||  ||  |||||| ||||||| ||||| || ||||||||    
T  35904448 atgtatttggactgaatttttaactaaatacat--acttttgttgactaaattttctctaataaataagaccgaagagagtatta 35904530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 36417079 - 36417042
Alignment:
Q  96 caaaattctcttataaataggaccggagggagtattat 133  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  36417079 caaatttctcttgtaaataggaccggagggagtattat 36417042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 41989493 - 41989538
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||| ||||||||||||||| |||||    
T  41989493 ttttgttgacctaaatttctcttacaaataggaccggaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 3280421 - 3280469
Alignment:
Q  62 aatttttaactagatacatcaatttttgttgacccaaaattctcttata 110  Q
    ||||||||||||||||||||||||||  |||| ||||  ||||||||||    
T  3280421 aatttttaactagatacatcaattttgtttgatccaactttctcttata 3280469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 11795212 - 11795168
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  11795212 ttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 6e-57; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 6122021 - 6121893
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  6122021 ctacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 6121922  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  6121921 ttctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 20538814 - 20538686
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  20538814 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaaattttgttgacccaaaa 20538715  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  20538714 ttctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 47833613 - 47833741
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  47833613 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 47833712  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  47833713 ttctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 48336265 - 48336397
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  48336265 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 48336364  T
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    || ||||||||||||||||||||||||||||||    
T  48336365 ttttcttataaataggaccggagggagtattat 48336397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 3904811 - 3904682
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  3904811 ctacctccggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaatttttgttgacccaaaa 3904712  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  3904711 ttctcttataaataggaccggagggagtat 3904682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 53337372 - 53337501
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  53337372 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttattgacccaaaa 53337471  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  53337472 ttctcttataaataggaccggagggagtat 53337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 3372123 - 3372251
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  3372123 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 3372222  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    || ||||||||||||||||||||||||||    
T  3372223 ttatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 51894710 - 51894582
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  51894710 ctacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtttttggactgaatttttaaccagatacatcaacttttgttgacccaaaa 51894611  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  51894610 ttctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 3992978 - 3993107
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||| | ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  3992978 ctacctccggtcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 3993077  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    |||||||||||||| |||||||||||||||    
T  3993078 ttctcttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 24704372 - 24704501
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||    
T  24704372 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacattaacttttgttgacccaaaa 24704471  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||| ||||||||||||    
T  24704472 ttctcttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 7579312 - 7579440
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7579312 ctacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaa 7579411  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    ||||||||||||||| |||||||| ||||    
T  7579412 ttctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 42797734 - 42797862
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  42797734 ctacctccggtcctatatataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaaaa 42797833  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  42797834 ttctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 46797727 - 46797855
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  46797727 ctacctccggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatcaacttttgttgacccaaaa 46797826  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  46797827 ttctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 47838745 - 47838613
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||| |||||||||||||| |||||| | ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  47838745 ctacctccgatcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgaccaaaaa 47838646  T
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    |||||||||||||||||||||||||||||||||    
T  47838645 ttctcttataaataggaccggagggagtattat 47838613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 33621805 - 33621929
Alignment:
Q  8 cggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctctt 107  Q
    |||| |||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  33621805 cggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattatctt 33621904  T
Q  108 ataaataggaccggagggagtatta 132  Q
    |||||||||||||||||||||||||    
T  33621905 ataaataggaccggagggagtatta 33621929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 43900554 - 43900679
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  43900554 cctccggtcctatttataagagaaatttaggtcaacaaaagtaaatgtatttggactgaatttttaactagatacatcaacttttgttaacccaaaattc 43900653  T
Q  104 tcttataaataggaccggagggagta 129  Q
    ||||||||||||||||||||| ||||    
T  43900654 tcttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 52756681 - 52756806
Alignment:
Q  5 ctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattct 104  Q
    |||||||||||||||||||| |||||||| |||||  ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  52756681 ctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 52756780  T
Q  105 cttataaataggaccggagggagtat 130  Q
     ||||||||||||||| |||||||||    
T  52756781 tttataaataggaccgaagggagtat 52756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 40913314 - 40913190
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||| |||| ||||| ||||||||| ||||| |||    
T  40913314 cctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactggatatatcaacttttgttgatccaaatttc 40913215  T
Q  104 tcttataaataggaccggagggagt 128  Q
    |||||||||||||||||||||||||    
T  40913214 tcttataaataggaccggagggagt 40913190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 41469887 - 41469763
Alignment:
Q  8 cggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctctt 107  Q
    ||||||||||||||| | |||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  41469887 cggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatcaacttttgttgaccaaaaattctctt 41469788  T
Q  108 ataaataggaccggagggagtatta 132  Q
    |||||||||||||||||||||||||    
T  41469787 ataaataggaccggagggagtatta 41469763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 5986878 - 5987009
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||| | |||||||||||| |||| ||| ||||| |||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  5986878 ctacctccgattctatttataagagaaatataggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaa 5986977  T
Q  101 ttctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||||||| ||||||||    
T  5986978 ttctcttataaataggaccggagagagtatta 5987009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 3422073 - 3422194
Alignment:
Q  11 tcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttata 110  Q
    |||||||||||||| |||||||| ||||| ||| |||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3422073 tcctatttataagagaaatttaggtcaacaaaa-tgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattctcttata 3422171  T
Q  111 aataggaccggagggagtattat 133  Q
    |||||||||||||||||||||||    
T  3422172 aataggaccggagggagtattat 3422194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33551203 - 33551312
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| || |||||||||||||||||||||||| ||||||  ||||||||    
T  33551203 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattttgactgaatttttaactagatacatcaacttttgtaaacccaaaa 33551302  T
Q  101 ttctcttata 110  Q
    ||||||||||    
T  33551303 ttctcttata 33551312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 26231579 - 26231688
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||| ||||||||||||| |||||||||||||||||| ||||| ||||||  ||| ||||    
T  26231579 ctacctccggtcctatttataagagaaatttaggtcaacaaaagcgaatgtatttggactgaatttttaactagatatatcaacttttgtaaaccgaaaa 26231678  T
Q  101 ttctcttata 110  Q
    ||||||||||    
T  26231679 ttctcttata 26231688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 41615794 - 41615676
Alignment:
Q  11 tcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttata 110  Q
    |||||||||||||| ||| |||| ||||| ||||| |||||||||||| | |||||||||||| ||||||||| ||||||||| ||||  ||||||||||    
T  41615794 tcctatttataagagaaaattaggtcaacaaaagttaatgtatttggacttaatttttaactaaatacatcaacttttgttgatccaattttctcttata 41615695  T
Q  111 aataggaccggagggagta 129  Q
    |||||||||||| ||||||    
T  41615694 aataggaccggatggagta 41615676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 50430533 - 50430431
Alignment:
Q  14 tatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaat 113  Q
    |||||||||||  || || | ||||| |||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||  | ||||||||||    
T  50430533 tatttataagagcaagttgggtcaacaaaagttgatgtatttggattgaatttttaaccagatacatcaatttttgttgacccaaatatatcttataaat 50430434  T
Q  114 agg 116  Q
    |||    
T  50430433 agg 50430431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 17344219 - 17344345
Alignment:
Q  5 ctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattct 104  Q
    ||||||| |||||||||||| ||| ||| |||||| |||||  |||||| || | |||||||||||   |||||||||| ||||||||| ||||| ||||    
T  17344219 ctccggttctatttataagagaaagttaaatcaacaaaagttgatgtatctgaactgaatttttaatcggatacatcaacttttgttgatccaaatttct 17344318  T
Q  105 cttataaataggaccggagggagtatt 131  Q
    |||||||||| ||  ||||||||||||    
T  17344319 cttataaataagattggagggagtatt 17344345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 4780301 - 4780425
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||| ||||||||||| | ||||| ||||   |||||| ||||||  | ||  |||||||||  |||||||| || ||||||||||| ||| |||    
T  4780301 cctccggtcttatttataagagacatttacatcagtaaaagtggatgtatccg-atccaatttttaatcagatacattaacttttgttgaccaaaatttc 4780399  T
Q  104 tcttataaataggaccggagggagta 129  Q
    ||||||||||||||||||||||||||    
T  4780400 tcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 17236864 - 17236919
Alignment:
Q  75 atacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||||| ||||||    
T  17236864 atacatcaacttttgttgacccaaatttttcttataaataggaccggagagagtat 17236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 43900593 - 43900547
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  43900593 ttttgttgacctaaatttctcttataaataggaccggagggagtatt 43900547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 129
Target Start/End: Original strand, 29845656 - 29845769
Alignment:
Q  10 gtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatc-aatttttgttgacccaaaattctctta 108  Q
    |||||| |||||||| |||||||| ||||| ||| | ||| |||||| | |||||||||||||| ||||||| || ||||||||| ||      ||||||    
T  29845656 gtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaacta-atacatcaaacttttgttgatcc------ctctta 29845748  T
Q  109 taaataggaccggagggagta 129  Q
    |||||||||||||||||||||    
T  29845749 taaataggaccggagggagta 29845769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 31013036 - 31013117
Alignment:
Q  14 tatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacc 95  Q
    ||||||||| | | |||||||||||| |||||  |||||||||| || |||| ||||||||||||||||  |||||||||||    
T  31013036 tatttataaaagacatttagatcaacaaaagtagatgtatttggtttaaattcttaactagatacatcatcttttgttgacc 31013117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 45478153 - 45478217
Alignment:
Q  60 tgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagg 124  Q
    ||||||||||||  |||||||||| |||| |||||||| | ||||||||||||||||| ||||||    
T  45478153 tgaatttttaaccggatacatcaacttttattgacccacatttctcttataaataggatcggagg 45478217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 47833655 - 47833607
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  47833655 ttttgttgacctaaatttctcttataaataggaccggaggtagtattat 47833607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 48336307 - 48336259
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  48336307 ttttgttgacctaaatttctcttataaataggaccggaggtagtattat 48336259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 3372165 - 3372118
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  3372165 ttttgttgacctaaatttctcttataaataggaccggaggtagtatta 3372118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 3993020 - 3992973
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  3993020 ttttgttgaccgaaatttctcttataaataggaccggaggtagtatta 3992973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 25855088 - 25855182
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaa 98  Q
    |||| |||||||||||| ||| ||| ||   ||||| ||||| |||||||||||| |||||||||||| | ||||||| | |||||| |||||||    
T  25855088 cctcaggtcctatttatgagagaaagttgagtcaacaaaagttaatgtatttggactgaatttttaaccaaatacatcgacttttgtagacccaa 25855182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 26231621 - 26231576
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  26231621 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 33551245 - 33551200
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  33551245 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 38160437 - 38160372
Alignment:
Q  64 tttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    |||||||  ||||||||||||||||||||||| |||  ||||||||||||| ||| |||| |||||    
T  38160437 tttttaatcagatacatcaatttttgttgacctaaatctctcttataaatatgactggagagagta 38160372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 40913275 - 40913320
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||| | ||| ||||||||||||||||||||||||||||||    
T  40913275 ttttgttgatctaaatttctcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 1716357 - 1716301
Alignment:
Q  73 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||||||||||| ||   ||||||||||||| ||||||||||||||    
T  1716357 agatacatcaacttttgttgaccaaattatctcttataaataagaccggagggagta 1716301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 20538772 - 20538816
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  20538772 ttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 24704414 - 24704370
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  24704414 ttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 44900136 - 44900080
Alignment:
Q  73 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||| ||||| |||||||||||  ||  ||||||||||||||||||||||||||||    
T  44900136 agatatatcaacttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 51894668 - 51894716
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| || ||||||||||||||||||||| ||||||||    
T  51894668 ttttgttgacctaaatttttcttataaataggaccggaggtagtattat 51894716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 53337414 - 53337370
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  53337414 ttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 17236912 - 17236845
Alignment:
Q  5 ctccggtcctatttataagaaaaatttagatcaactaaagtgaatgta-tttggattgaatttttaac 71  Q
    ||||||||||||||||||||||||||| | ||||| |||||  ||||| ||| || ||||||||||||    
T  17236912 ctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtattttagactgaatttttaac 17236845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 42797776 - 42797729
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||| ||| |||||||||| ||||||||||||| |||||||    
T  42797776 ttttgttgacctaaatttctcttatatataggaccggaggtagtatta 42797729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 6422530 - 6422600
Alignment:
Q  62 aatttttaactagatacatcaatttttgttgacccaaaattctcttataaat-aggaccggagggagtatt 131  Q
    |||||| ||||| ||| ||||||||||||||||| |||  |||||||||||| |||| |||| ||||||||    
T  6422530 aattttaaactaaatatatcaatttttgttgacctaaatatctcttataaataaggatcggatggagtatt 6422600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 35663970 - 35663912
Alignment:
Q  73 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||||||||||| ||||||  |||||||||  ||| |||||||| |||||||    
T  35663970 agatacatcaatttttgtttacccaactttctcttatgtataagaccggagagagtatt 35663912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 3079678 - 3079735
Alignment:
Q  76 tacatcaatttttgttgacc-caaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||||  |||| ||||||||||| ||||||| | |||||||||    
T  3079678 tacatcaatttttgttgaccaaaaaaatctcttataaagaggaccgaacggagtatta 3079735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 3904769 - 3904814
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||| ||||||||||||||||||| |||||    
T  3904769 ttttgttgacctaaatttcttttataaataggaccggaggtagtat 3904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 4780420 - 4780371
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtat 53  Q
    ||||||||||||||||||||| |||||| | ||||| ||||| |||||||    
T  4780420 cctccggtcctatttataagagaaattttggtcaacaaaagttaatgtat 4780371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 7579354 - 7579309
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||| ||| ||| |||||||||||||||||||||||| |||||    
T  7579354 ttttgttaacctaaatttctcttataaataggaccggaggtagtat 7579309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 40913194 - 40913235
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagt 45  Q
    ||||||||||||||||||||| |||||| ||||||| |||||    
T  40913194 cctccggtcctatttataagagaaatttggatcaacaaaagt 40913235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 47838703 - 47838748
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| ||||||||||||||||| |||||| |||||    
T  47838703 ttttgttgaccgaaatttctcttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 133
Target Start/End: Complemental strand, 48361076 - 48361047
Alignment:
Q  104 tcttataaataggaccggagggagtattat 133  Q
    ||||||||||||||||||||||||||||||    
T  48361076 tcttataaataggaccggagggagtattat 48361047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 1716365 - 1716417
Alignment:
Q  65 ttttaactagatacatcaatttttgttgacccaaaattctcttataaatagga 117  Q
    ||||||| |||| |||||| ||| ||||||| ||| |||||||||||||||||    
T  1716365 ttttaaccagatgcatcaactttggttgacctaaacttctcttataaatagga 1716417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 6121979 - 6122023
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||||    
T  6121979 ttttgttgatctaaatttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 23226070 - 23226018
Alignment:
Q  62 aatttttaactagatacatcaatttttgttgacccaaaattctcttataaata 114  Q
    |||||| |||| |||||||||||||||||||| | |||  |||||||||||||    
T  23226070 aattttgaactggatacatcaatttttgttgatctaaatatctcttataaata 23226018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 24393895 - 24393951
Alignment:
Q  75 atacatcaatttt-tgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||||| ||||||||||||  | |||||| |||| |||||||||||||||    
T  24393895 atacatcaattttttgttgacccaaatgtttcttatgaatatgaccggagggagtat 24393951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 29845692 - 29845644
Alignment:
Q  82 aatttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    |||||||||||||| ||| ||||||||||| |||||| | |||||||||    
T  29845692 aatttttgttgacctaaatttctcttataagtaggactgaagggagtat 29845644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 41116566 - 41116594
Alignment:
Q  4 cctccggtcctatttataagaaaaattta 32  Q
    |||||||||||||||||||||||||||||    
T  41116566 cctccggtcctatttataagaaaaattta 41116594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 46797769 - 46797725
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  46797769 ttttgttgacctaaatttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 41478767 - 41478636
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  41478767 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 41478668  T
Q  101 ttctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||||||||||||||||    
T  41478667 ttctcttataaataggaccggagggagtatta 41478636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 3055560 - 3055690
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  3055560 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 3055659  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    |||||||||||||||||||||||||||||||    
T  3055660 ttctcttataaataggaccggagggagtatt 3055690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 37990141 - 37990011
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  37990141 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 37990042  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    |||||||||||||||||||||||||||||||    
T  37990041 ttctcttataaataggaccggagggagtatt 37990011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 44398688 - 44398817
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  44398688 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 44398787  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  44398788 ttctcttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 13197838 - 13197710
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  13197838 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 13197739  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  13197738 ttctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 15896844 - 15896972
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  15896844 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 15896943  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  15896944 ttctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 16243907 - 16243779
Alignment:
Q  5 ctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattct 104  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  16243907 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 16243808  T
Q  105 cttataaataggaccggagggagtattat 133  Q
    |||||||||||||||||| ||||||||||    
T  16243807 cttataaataggaccggatggagtattat 16243779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 38917650 - 38917521
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||  |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  38917650 ctacctccggtcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 38917551  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  38917550 ttctcttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 44397549 - 44397678
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  44397549 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 44397648  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||| ||||||||    
T  44397649 ttctcttataaataggaccggggggagtat 44397678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 6648647 - 6648515
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| |||||  || |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  6648647 ctacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 6648548  T
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    |||||||||||||||||||||||||||||||||    
T  6648547 ttctcttataaataggaccggagggagtattat 6648515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 12338065 - 12337937
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  12338065 ctacctccggttctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 12337966  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  12337965 ttctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 37666738 - 37666607
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||    
T  37666738 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaaaa 37666639  T
Q  101 ttctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||||||||||||||||    
T  37666638 ttctcttataaataggaccggagggagtatta 37666607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 16044445 - 16044317
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||    
T  16044445 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaaaa 16044346  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  16044345 ttctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 9047879 - 9047752
Alignment:
Q  5 ctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattct 104  Q
    |||||||| ||||||||||| |||||||| ||||  |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  9047879 ctccggtcatatttataagagaaatttaggtcaaaaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 9047780  T
Q  105 cttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||||||||||||    
T  9047779 cttataaataggaccggagggagtatta 9047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 13344486 - 13344615
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||||| |||||||||||| |||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  13344486 ctacctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaa 13344585  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  13344586 ttctcttataaataggaccggagggagtat 13344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 15372231 - 15372356
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||| ||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  15372231 cctccagtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacgagatacatcaacttttgttgacccaaaattc 15372330  T
Q  104 tcttataaataggaccggagggagta 129  Q
    ||||||||||||||||||||||||||    
T  15372331 tcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 30099310 - 30099181
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||| |||||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  30099310 ctacctccgatcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggattgaatttttaattagatacatcaacttttgttgacccaaaa 30099211  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    |||||| |||||||||||||||||||||||    
T  30099210 ttctctaataaataggaccggagggagtat 30099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 41493015 - 41492893
Alignment:
Q  10 gtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttat 109  Q
    ||||||||||||| | |||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  41493015 gtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatcaacttttgttgacccaaatttctcttat 41492916  T
Q  110 aaataggaccggagggagtatta 132  Q
    |||||||||||||||||||||||    
T  41492915 aaataggaccggagggagtatta 41492893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4684060 - 4683951
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||  ||| ||||    
T  4684060 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgtaaaccgaaaa 4683961  T
Q  101 ttctcttata 110  Q
    ||||||||||    
T  4683960 ttctcttata 4683951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 44804680 - 44804581
Alignment:
Q  27 aatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggaggga 126  Q
    ||||||| |||||  || |||||||||||||| |||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||||||||||||    
T  44804680 aatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatcaacttttgttaacttaaaattctcttataaataggaccggaggga 44804581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 12170524 - 12170395
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    |||||| ||||||||| |||| ||| |||| ||||  ||||| |||||||||||| |||||||||||||| ||||||||| ||||||||||||||  |||    
T  12170524 cctccgatcctatttacaagagaaaattaggtcaataaaagttaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaagtttc 12170425  T
Q  104 tcttataaataggaccggagggagtattat 133  Q
    ||||||||||| || |||| | ||||||||    
T  12170424 tcttataaataagatcggatgaagtattat 12170395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 16734802 - 16734910
Alignment:
Q  18 tataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaatagga 117  Q
    ||||||| ||| || | ||||| |||||  |||||| |||| |||||||||||| | ||||||||| ||||||| || |||  |||||||||||||||||    
T  16734802 tataagagaaagtttggtcaacaaaagttgatgtatctggactgaatttttaaccaaatacatcaacttttgtttactcaactttctcttataaatagga 16734901  T
Q  118 ccggaggga 126  Q
    | |||||||    
T  16734902 ctggaggga 16734910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 15372270 - 15372222
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||||||||    
T  15372270 ttttgttgacctaaatttctcttataaataggactggagggagtattat 15372222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 31150659 - 31150769
Alignment:
Q  5 ctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattct 104  Q
    ||||| |||||||||||||| ||| ||   ||||| |||||  ||||||||||| | ||||||||||||||||||      ||||||||||||   ||||    
T  31150659 ctccgatcctatttataagagaaagttgcgtcaacaaaagtttatgtatttggactaaatttttaactagataca-----atttgttgacccatgtttct 31150753  T
Q  105 cttataaataggaccg 120  Q
    ||||||||||||||||    
T  31150754 cttataaataggaccg 31150769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 37990099 - 37990145
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  37990099 ttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 41478725 - 41478771
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  41478725 ttttgttgacctaaatttctcttataaataggaccggaggtagtatt 41478771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 3055602 - 3055557
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  3055602 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 3055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 4684018 - 4684063
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  4684018 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 13724167 - 13724102
Alignment:
Q  64 tttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    |||||||| | ||||||||| ||||||||||| | |  |||||| |||||||||||||||||||||    
T  13724167 tttttaaccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 15896886 - 15896841
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  15896886 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 15896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 44397591 - 44397546
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  44397591 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 44398730 - 44398685
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  44398730 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 13197796 - 13197840
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  13197796 ttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 13344530 - 13344482
Alignment:
Q  83 atttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||||    
T  13344530 atttttgttgacctaaatttctcttataaatagaaccggaggtagtatt 13344482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 13775832 - 13775864
Alignment:
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    |||||||||||||||||||||||||||||||||    
T  13775832 ttctcttataaataggaccggagggagtattat 13775864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 16044403 - 16044447
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  16044403 ttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 37666696 - 37666740
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  37666696 ttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 15258850 - 15258783
Alignment:
Q  70 actagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtattatgaaa 137  Q
    ||||||||||||||||||||||||| ||||  ||| | ||||||| || ||||| |||||| ||||||    
T  15258850 actagatacatcaatttttgttgactcaaacgtctttaataaataagatcggagagagtatgatgaaa 15258783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 6648603 - 6648649
Alignment:
Q  83 atttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    |||| |||||||| ||| |||||||||||||||||||||||| ||||    
T  6648603 atttatgttgacctaaatttctcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 23227348 - 23227406
Alignment:
Q  75 atacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||| ||||||||||| |||  ||||||||||||||||| | ||| ||||||||    
T  23227348 atacatcaacttttgttgaccaaaatgtctcttataaataggactgaaggaagtattat 23227406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 4553125 - 4553052
Alignment:
Q  14 tatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttt 87  Q
    ||||||||||| ||| || | ||||| ||| |  |||||||||||||||||||||||  |||||||| ||||||    
T  4553125 tatttataagagaaagtttggtcaacaaaaatagatgtatttggattgaatttttaataagatacattaatttt 4553052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 124
Target Start/End: Original strand, 30099266 - 30099307
Alignment:
Q  83 atttttgttgacccaaaattctcttataaataggaccggagg 124  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||    
T  30099266 atttttgttgacctaaatttctcttataaataggatcggagg 30099307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 130
Target Start/End: Original strand, 30852719 - 30852748
Alignment:
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  30852719 ttctcttataaataggaccggagggagtat 30852748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 36688892 - 36688977
Alignment:
Q  9 ggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgac 94  Q
    |||||||||||||||| ||| || | ||||| || ||  |||||| | |  |||||||| ||| ||||||||||||||||||||||    
T  36688892 ggtcctatttataagagaaagtttggtcaacaaacgttgatgtatcttgtctgaattttaaacaagatacatcaatttttgttgac 36688977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 41453084 - 41453149
Alignment:
Q  24 aaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttg 89  Q
    ||||| |||| ||||  ||||| |||||||||||| |||||||||||| | ||||||||| |||||    
T  41453084 aaaaagttaggtcaataaaagttaatgtatttggactgaatttttaacaaaatacatcaacttttg 41453149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 130
Target Start/End: Complemental strand, 42263497 - 42263468
Alignment:
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  42263497 ttctcttataaataggaccggagggagtat 42263468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 20900727 - 20900794
Alignment:
Q  62 aatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    |||||| ||| |||||| |||||||||||||||| ||   |||||| ||||||||| ||||||||||||    
T  20900727 aattttgaaccagatacgtcaatttttgttgacctaactatctcttgtaaatagga-cggagggagtat 20900794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 23787 - 23919
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  23787 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 23886  T
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    || ||||||||||||||||||||||||||||||    
T  23887 ttttcttataaataggaccggagggagtattat 23919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 23829 - 23781
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattat 133  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  23829 ttttgttgacctaaatttctcttataaataggaccggaggtagtattat 23781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 1e-54; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 9981649 - 9981781
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  9981649 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 9981748  T
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    |||||||||||||||||||||||||| ||||||    
T  9981749 ttctcttataaataggaccggagggaatattat 9981781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 27159486 - 27159358
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  27159486 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 27159387  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  27159386 ttctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 31842923 - 31842795
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  31842923 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 31842824  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  31842823 ttctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 39402094 - 39401966
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  39402094 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 39401995  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  39401994 ttctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 44668221 - 44668093
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  44668221 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 44668122  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  44668121 ttctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 14984843 - 14984970
Alignment:
Q  5 ctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattct 104  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  14984843 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 14984942  T
Q  105 cttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||||||||||||    
T  14984943 cttataaataggaccggagggagtatta 14984970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 47216827 - 47216698
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  47216827 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 47216728  T
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||| ||||||||||||||    
T  47216727 ttctcttataaatagtaccggagggagtat 47216698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 11795935 - 11796063
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  11795935 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 11796034  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  11796035 ttctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 26471193 - 26471065
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  26471193 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgatccaaaa 26471094  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  26471093 ttctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 25694331 - 25694450
Alignment:
Q  11 tcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttata 110  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25694331 tcctatttataagagaaatttagatcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattctcttata 25694430  T
Q  111 aataggaccggagggagtat 130  Q
    ||||||||||||||||||||    
T  25694431 aataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 1050890 - 1051020
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||| ||||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  1050890 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatcaactttagttgacccaaaa 1050989  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    |||||||||||||||||||||||||||||||    
T  1050990 ttctcttataaataggaccggagggagtatt 1051020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 34042698 - 34042828
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  34042698 ctacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 34042797  T
Q  101 ttctcttataaataggaccggagggagtatt 131  Q
    ||||||||||||||| |||||||||||||||    
T  34042798 ttctcttataaatagaaccggagggagtatt 34042828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 44955334 - 44955212
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  44955334 ctacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaaaa 44955235  T
Q  101 ttctcttataaataggaccggag 123  Q
    |||||||||||||||||||||||    
T  44955234 ttctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 47777609 - 47777481
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  47777609 ctacccccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatcaacttttgttgacccaaaa 47777510  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  47777509 ttctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 12483756 - 12483625
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| || |||||||| ||||| ||||||||| ||||||||||||||||    
T  12483756 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaattttgaactaaatacatcaacttttgttgacccaaaa 12483657  T
Q  101 ttctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||||||||||||||||    
T  12483656 ttctcttataaataggaccggagggagtatta 12483625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 47588465 - 47588334
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    ||||||| |||| ||||||||||| |||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  47588465 ctacctctggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatcaacttttgttgacccaaaa 47588366  T
Q  101 ttctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||  |||| |||||||||||    
T  47588365 ttctcttataaataaaaccgaagggagtatta 47588334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 23278129 - 23278021
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  23278129 ctacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 23278030  T
Q  101 ttctcttat 109  Q
    |||||||||    
T  23278029 ttctcttat 23278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 133
Target Start/End: Original strand, 47969700 - 47969829
Alignment:
Q  5 ctccggtcctatttataa-gaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    |||||||||||||||||| || |||||||| ||||| ||||| ||||||||| || |||||||||||||||||||||||| ||||||||| ||||||||     
T  47969700 ctccggtcctatttataaagagaaatttaggtcaacaaaagtaaatgtatttagactgaatttttaactagatacatcaacttttgttgatccaaaatta 47969799  T
Q  104 tcttataaataggaccggagggagtattat 133  Q
    | ||||||||||||||||||||||||||||    
T  47969800 ttttataaataggaccggagggagtattat 47969829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 17556757 - 17556884
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaa-tgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaatt 102  Q
    |||| |||||||||||||||| ||| |||| ||||| ||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||  ||    
T  17556757 cctctggtcctatttataagagaaagttaggtcaacaaaagttaaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaagttt 17556856  T
Q  103 ctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||    
T  17556857 ctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 11897059 - 11897186
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| ||| |||| ||||| |||||  |||||| || | ||||||||||||  |||||||||| ||||||||||||||| |||    
T  11897059 cctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatctgaactgaatttttaaccggatacatcaacttttgttgacccaaatttc 11897158  T
Q  104 tcttataaataggaccggagggagtatt 131  Q
    ||||||||||||||||||||||||||||    
T  11897159 tcttataaataggaccggagggagtatt 11897186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 37552146 - 37552272
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| ||| ||   ||||| | |||  |||||| |||| |||||||||||| ||||||||  ||||||||||||||||| |||    
T  37552146 cctccggtcctatttataagataaagttgagtcaacaacagttcatgtatctggactgaatttttaaccagatacattcatttttgttgacccaaatttc 37552245  T
Q  104 tcttataaataggaccggagggagtat 130  Q
    |||||||||||||||||| ||||||||    
T  37552246 tcttataaataggaccggggggagtat 37552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 12213599 - 12213484
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||| ||| ||||||||||| ||  |||| ||||| ||| | ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||  |||    
T  12213599 cctccagtcttatttataagagaatgttaggtcaacaaaaattaatgtatttagattgaatttttaactaaataaatcaatttttgttgacccaagtttc 12213500  T
Q  104 tcttataaataggacc 119  Q
    ||| ||||||||||||    
T  12213499 tctaataaataggacc 12213484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 16448233 - 16448108
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| ||| || | ||||| |||||  |||||| |||| |||||||| ||| |||||||| || |||||||||||||| ||||    
T  16448233 cctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatctggactgaattttgaaccagatacataaacttttgttgacccaatattc 16448134  T
Q  104 tcttataaataggaccggagggagta 129  Q
     | |||||||| |||||||| |||||    
T  16448133 ccctataaataagaccggagtgagta 16448108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 129
Target Start/End: Original strand, 11989796 - 11989911
Alignment:
Q  14 tatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaat 113  Q
    ||||||||||| ||| || | ||||| |||   ||| |||||||| |||||||||||| | |||||||||||||| ||||| |||| |||| ||||||||    
T  11989796 tatttataagagaaagttgggtcaacaaaaactaatatatttggactgaatttttaaccaaatacatcaatttttattgactcaaatttcttttataaat 11989895  T
Q  114 aggaccggagggagta 129  Q
    ||||||||||||||||    
T  11989896 aggaccggagggagta 11989911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 73 - 130
Target Start/End: Original strand, 16448182 - 16448239
Alignment:
Q  73 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  16448182 agatacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 11897110 - 11897053
Alignment:
Q  73 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||||||||||| ||  ||||||||||||||||||||||||||||||    
T  11897110 agatacatcaacttttgttgacctaactttctcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 12062568 - 12062679
Alignment:
Q  7 ccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctct 106  Q
    |||||||||||||||| | | |||| ||||||| |||||  |||||| || ||| |||||||||  |||||||| ||||||||||||   ||| ||||||    
T  12062568 ccggtcctatttataaaagatattttgatcaacaaaagttgatgtatctg-attcaatttttaatcagatacattaatttttgttgatttaaatttctct 12062666  T
Q  107 tataaataggacc 119  Q
    |||||||||||||    
T  12062667 tataaataggacc 12062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 1598461 - 1598380
Alignment:
Q  48 atgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| |||||||||||| | ||||||||||||||||||| ||| | ||||||||||||||||| |||| || |||||    
T  1598461 atgtatttggactgaatttttaac-atatacatcaatttttgttga-ccatatttctcttataaataggatcggatggggtatt 1598380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 12043616 - 12043726
Alignment:
Q  11 tcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctcttata 110  Q
    |||||||||||| | | |||||  ||||| |||||  ||||||||| ||| |||||||||| |||||||| ||||||||||||   ||| || |||||||    
T  12043616 tcctatttataaaagatatttaagtcaacaaaagttgatgtatttg-attcaatttttaacaagatacattaatttttgttgatttaaatttttcttata 12043714  T
Q  111 aataggaccgga 122  Q
    ||||||||||||    
T  12043715 aataggaccgga 12043726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 27159444 - 27159493
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattatg 134  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  27159444 ttttgttgacctaaatttctcttataaataggaccggaggtagtattatg 27159493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 44668179 - 44668228
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtattatg 134  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  44668179 ttttgttgacctaaatttctcttataaataggaccggaggtagtattatg 44668228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 12483633 - 12483761
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    ||||||||||||||||||||| || ||| | ||||| |||||  |||||||| | |  || ||    ||| ||||||  | ||||||||||| ||| |||    
T  12483633 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttc 12483732  T
Q  104 tcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||||| |||||||    
T  12483733 tcttataaataggaccggaggtagtatta 12483761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 12213550 - 12213605
Alignment:
Q  75 atacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    |||||| |||||||||||||| || ||||||||||||||| ||| |||||||||||    
T  12213550 atacattaatttttgttgacctaacattctcttataaataagactggagggagtat 12213605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 26471151 - 26471198
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  26471151 ttttgttgacctaaatttctcttataaataggaccggaggtagtatta 26471198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 34042742 - 34042695
Alignment:
Q  83 atttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  34042742 atttttgttgacctaaatttctcttataaataggaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 5392198 - 5392144
Alignment:
Q  78 catcaatttttgttgacccaaaattctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||| ||||  |||||||||||||||| ||||| ||||||||    
T  5392198 catcaatttttgttgacacaaatgtctcttataaataggatcggagtgagtatta 5392144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 11795977 - 11795931
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  11795977 ttttgttgacctaaatttctcttataaataggaccggaggtagtatt 11795931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 23278085 - 23278131
Alignment:
Q  83 atttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23278085 atttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 129
Target Start/End: Complemental strand, 37552263 - 37552141
Alignment:
Q  7 ccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattctct 106  Q
    |||||||||||||||||| |||||| | ||||| ||| ||||||||| ||| |  || ||    | |||||||| || | |||||||| |||  || |||    
T  37552263 ccggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatct 37552164  T
Q  107 tataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||    
T  37552163 tataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 9981691 - 9981646
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  9981691 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 1050932 - 1050888
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  1050932 ttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 12047155 - 12047223
Alignment:
Q  48 atgtatttggattgaattttt-aactagatacatcaatttttgttgacccaaaattctcttataaatag 115  Q
    |||||||| || ||||||||| |||| ||||||||||| ||| |||| ||||| |||||||||||||||    
T  12047155 atgtatttagactgaattttttaactggatacatcaatctttattgatccaaatttctcttataaatag 12047223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 31842881 - 31842925
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  31842881 ttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 39402052 - 39402096
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  39402052 ttttgttgacctaaatttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 47216785 - 47216829
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47216785 ttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 12043726 - 12043679
Alignment:
Q  6 tccggtcctatttataagaaaaatttagatcaactaaagtgaatgtat 53  Q
    ||||||||||||||||||||||||||| |||||| ||| | |||||||    
T  12043726 tccggtcctatttataagaaaaatttaaatcaacaaaaattaatgtat 12043679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 47678402 - 47678371
Alignment:
Q  1 ctacctccggtcctatttataagaaaaattta 32  Q
    ||||||||||||||||||||||||||||||||    
T  47678402 ctacctccggtcctatttataagaaaaattta 47678371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 14984881 - 14984843
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggag 123  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  14984881 ttttgttgacctaaatttctcttataaataggaccggag 14984843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 21537943 - 21538001
Alignment:
Q  73 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| |||||||||| |||  |||||||||||||| || ||||| |||||||    
T  21537943 agatacatcaacttttgttgactcaattttctcttataaataagatcggagagagtatt 21538001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 47844536 - 47844566
Alignment:
Q  2 tacctccggtcctatttataagaaaaattta 32  Q
    |||||||||||||||||||||||||||||||    
T  47844536 tacctccggtcctatttataagaaaaattta 47844566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 17556796 - 17556751
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    ||||||||||| ||  ||||||||||||||||||| ||||||||||    
T  17556796 ttttgttgacctaactttctcttataaataggaccagagggagtat 17556751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 132
Target Start/End: Original strand, 26760297 - 26760325
Alignment:
Q  104 tcttataaataggaccggagggagtatta 132  Q
    |||||||||||||||||||||||||||||    
T  26760297 tcttataaataggaccggagggagtatta 26760325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 132
Target Start/End: Complemental strand, 26924237 - 26924209
Alignment:
Q  104 tcttataaataggaccggagggagtatta 132  Q
    |||||||||||||||||||||||||||||    
T  26924237 tcttataaataggaccggagggagtatta 26924209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 132
Target Start/End: Original strand, 26924337 - 26924365
Alignment:
Q  104 tcttataaataggaccggagggagtatta 132  Q
    |||||||||||||||||||||||||||||    
T  26924337 tcttataaataggaccggagggagtatta 26924365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 44955292 - 44955336
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| || ||||||||||||||||||||| ||||    
T  44955292 ttttgttgacctaaatttttcttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 47777567 - 47777603
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccgg 121  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  47777567 ttttgttgacctaaatttctcttataaataggaccgg 47777603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 108; Significance: 6e-54; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 12862 - 12993
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  12862 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgctgacccaaaa 12961  T
Q  101 ttctcttataaataggaccggagggagtatta 132  Q
    ||||||||||||||||||||||||||||||||    
T  12962 ttctcttataaataggaccggagggagtatta 12993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 12904 - 12858
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  12904 ttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 6259 - 6127
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||    
T  6259 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatgtggactgaatttttaactagatacatcaacttttgttgacccaaaa 6160  T
Q  101 ttctcttataaataggaccggagggagtattat 133  Q
    || ||||||||||||||||||||||||||||||    
T  6159 ttttcttataaataggaccggagggagtattat 6127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 6217 - 6261
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6217 ttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 49507 - 49635
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  49507 ctacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcaacttttgttgacccaaaa 49606  T
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  49607 ttctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 49549 - 49503
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 131  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  49549 ttttgttgacctaaatttctcttataaataggaccggaggtagtatt 49503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 93; Significance: 5e-45; HSPs: 2)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1337 - 1453
Alignment:
Q  1 ctacctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaa 100  Q
    |||| ||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  1337 ctacatccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaa 1436  T
Q  101 ttctcttataaatagga 117  Q
    |||||||||||||||||    
T  1437 ttctcttataaatagga 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 1379 - 1342
Alignment:
Q  85 ttttgttgacccaaaattctcttataaataggaccgga 122  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  1379 ttttgttgacctaaatttctcttataaataggaccgga 1342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 231428 - 231301
Alignment:
Q  4 cctccggtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaattc 103  Q
    |||||| ||||| |||||||| ||| || ||||||| |||||  |||||| |||| |||||||| |||||| || ||||| ||||||||||| || ||||    
T  231428 cctccgatcctaattataagagaaagttggatcaacaaaagtttatgtatctggactgaattttgaactaggtatatcaacttttgttgacctaatattc 231329  T
Q  104 tcttataaataggaccggagggagtatt 131  Q
    || |||||||||||||||||||||||||    
T  231328 tcctataaataggaccggagggagtatt 231301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 231377 - 231433
Alignment:
Q  73 agatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 129  Q
    |||||||| || ||||||||| ||||  ||||||||||| ||||| |||||||||||    
T  231377 agatacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 129
Target Start/End: Complemental strand, 13845 - 13731
Alignment:
Q  10 gtcctatttataagaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatc--aatttttgttgacccaaaattctctt 107  Q
    |||||| |||||||| |||||||| ||||| ||| | ||| |||||| | |||||||||||||| |||||||  || ||||||||| ||      |||||    
T  13845 gtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaacta-atacatcaaaacttttgttgatcc------ctctt 13753  T
Q  108 ataaataggaccggagggagta 129  Q
    ||||||||||||||||||||||    
T  13752 ataaataggaccggagggagta 13731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 13809 - 13857
Alignment:
Q  82 aatttttgttgacccaaaattctcttataaataggaccggagggagtat 130  Q
    |||||||||||||| ||| ||||||||||| |||||| | |||||||||    
T  13809 aatttttgttgacctaaatttctcttataagtaggactgaagggagtat 13857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 312781 - 312843
Alignment:
Q  62 aatttttaactagatacatcaatttttgttgacccaaaattctcttataaataggaccggagg 124  Q
    |||||| ||||||||||||||||||||||||| | |||| |||||| ||||||  ||||||||    
T  312781 aattttaaactagatacatcaatttttgttgatcaaaaagtctcttttaaataaaaccggagg 312843  T

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Target: scaffold0650 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 109 - 1
Alignment:
Q  4 cctccggtcctatttata-agaaaaatttagatcaactaaagtgaatgtatttggattgaatttttaactagatacatcaatttttgttgacccaaaatt 102  Q
    |||||||| ||||||||| ||||| |||  | ||||| |||||  ||||||||||| | |||||||||| | ||||||||| |||||||||| | |  ||    
T  109 cctccggttctatttatagagaaagatt--ggtcaacaaaagttgatgtatttggactaaatttttaaccaaatacatcaacttttgttgactcgacttt 12  T
Q  103 ctcttataaat 113  Q
    |||||||||||    
T  11 ctcttataaat 1  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 77466 - 77496
Alignment:
Q  102 tctcttataaataggaccggagggagtatta 132  Q
    |||||||||||||||||||||||||||||||    
T  77466 tctcttataaataggaccggagggagtatta 77496  T

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Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 77372 - 77344
Alignment:
Q  101 ttctcttataaataggaccggagggagta 129  Q
    |||||||||||||||||||||||||||||    
T  77372 ttctcttataaataggaccggagggagta 77344  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 130
Target Start/End: Complemental strand, 492332 - 492303
Alignment:
Q  101 ttctcttataaataggaccggagggagtat 130  Q
    ||||||||||||||||||||||||||||||    
T  492332 ttctcttataaataggaccggagggagtat 492303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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