View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11456_high_5 (Length: 296)
Name: NF11456_high_5
Description: NF11456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11456_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 21 - 290
Target Start/End: Original strand, 18109787 - 18110056
Alignment:
| Q |
21 |
ctgttccagaaaatagtgaggcagagaaacttgaagccaaatttgaacaaggtactctcatccttaaaatgcaaaagaagccaatttcacaatcatcaca |
120 |
Q |
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| T |
18109787 |
ctgttccagaaaatagtgaggcagagaaacttgaagccaaatttgaacaaggtactctcatccttaaaatgcaaaagaagccaatttcacaatcatcaca |
18109886 |
T |
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| Q |
121 |
agtagctcctcaacaagaagtagaaaaaagtccttcaaataataaagatttagatgaagcaaaggttgaaaaagctcaagagaccaatattccatcacca |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
18109887 |
agtagctcctcaacaagaagtagaaaaaagtccttcaaataataaagatttagatgaagcaaaggttgaaaaagctcaagagaccaatattccaccacca |
18109986 |
T |
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| Q |
221 |
caatctactaatttggaagaatcaaccaaagacatgaaaagtgattcacctcaaacttctcaaaccattg |
290 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
18109987 |
caatctactaatttggaagaatcaactaaagacatgaaaagtgattcacctcaaacttctcaaagcattg |
18110056 |
T |
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