View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11456_low_9 (Length: 241)
Name: NF11456_low_9
Description: NF11456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11456_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 38276840 - 38277060
Alignment:
| Q |
1 |
aaacttgaaatcctatcaaagagtctcttactcttgcggtgattctactatattaatcttctcattcttttgtggactgaatggtttttatcattccttt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38276840 |
aaacttgaaatcctatcaaagagtctcttactcttgcggtgattctactacattaatcttctcattcttttgtggactgaatggtttttatcattccttt |
38276939 |
T |
|
| Q |
101 |
ctagttctactacacattttcttgttagtttttctccttttctttgccgtgttccaaaaatatcacttgattagttcttcagcttacattaatgcatttg |
200 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38276940 |
ct------actacacattttcttgttagtttttctccttttctttgccgtgttccaaaaatatcacttgattagttcttcagcttacattaatgcatttg |
38277033 |
T |
|
| Q |
201 |
aatcca-ttttttatcagcagctattt |
226 |
Q |
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|||||| |||||||||||||||||||| |
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| T |
38277034 |
aatccatttttttatcagcagctattt |
38277060 |
T |
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