View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11457_high_15 (Length: 295)
Name: NF11457_high_15
Description: NF11457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11457_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 19 - 287
Target Start/End: Complemental strand, 1435714 - 1435434
Alignment:
| Q |
19 |
tttacctccagtgagcaagacttttggagtggcatgtttcatgacaactgctgcatattatctgaatctttatgatgcagagagcatagcactattttat |
118 |
Q |
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| T |
1435714 |
tttacctccagtgagcaagacttttggagtggcatgtttcatgacaactgctgcatattatctgaatctttatgatgcagagagcatagcactattttat |
1435615 |
T |
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| Q |
119 |
ggcttagtgtttaaacgacttcaggtttgtaatcaaagaaatttccttatccttaagcatagcactacataataatactgaaaatt------------ca |
206 |
Q |
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||||||||||||||||||||||| |||||||||| || | |||||||||||||||||||||||||||||| |||||||||||||| || |
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| T |
1435614 |
ggcttagtgtttaaacgacttcaagtttgtaatccaaacactttccttatccttaagcatagcactacatactaatactgaaaattcattttctgattca |
1435515 |
T |
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| Q |
207 |
ttcaccatttagttttcttgatcatgtaacatttttgtttatattttttgcaggtttggaggcttatcacaaatttcttct |
287 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1435514 |
ttcatcatttagttttcttgatcatgtaacatttttgtttatattttttgcaggtttggaggcttatcacaaatttcttct |
1435434 |
T |
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