View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11458_low_3 (Length: 359)

Name: NF11458_low_3
Description: NF11458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11458_low_3
NF11458_low_3
[»] chr8 (28 HSPs)
chr8 (163-340)||(41778621-41778799)
chr8 (8-146)||(41778850-41778988)
chr8 (19-146)||(12575407-12575535)
chr8 (11-146)||(13097022-13097163)
chr8 (11-143)||(14418467-14418599)
chr8 (163-224)||(44008478-44008539)
chr8 (163-224)||(13097215-13097275)
chr8 (162-225)||(587618-587681)
chr8 (162-225)||(626241-626304)
chr8 (162-224)||(12820640-12820703)
chr8 (162-224)||(37681283-37681343)
chr8 (75-146)||(41836300-41836373)
chr8 (168-224)||(14349300-14349356)
chr8 (176-224)||(33883114-33883162)
chr8 (162-224)||(45155031-45155092)
chr8 (177-224)||(5538535-5538582)
chr8 (177-224)||(12583328-12583375)
chr8 (11-57)||(41836420-41836466)
chr8 (177-221)||(43681653-43681697)
chr8 (162-224)||(36710400-36710460)
chr8 (162-215)||(25231378-25231429)
chr8 (170-224)||(27805359-27805413)
chr8 (80-146)||(44008360-44008426)
chr8 (171-224)||(29612948-29613001)
chr8 (167-223)||(3604663-3604719)
chr8 (177-224)||(31981664-31981709)
chr8 (177-224)||(31986591-31986636)
chr8 (162-224)||(41836202-41836261)
[»] chr1 (27 HSPs)
chr1 (11-146)||(34066346-34066482)
chr1 (11-146)||(16190286-16190421)
chr1 (11-130)||(13495989-13496107)
chr1 (11-146)||(1936628-1936767)
chr1 (166-224)||(8435428-8435486)
chr1 (11-108)||(32506000-32506098)
chr1 (167-224)||(17618857-17618914)
chr1 (162-218)||(22456494-22456550)
chr1 (75-146)||(8435302-8435373)
chr1 (11-127)||(10764921-10765036)
chr1 (11-127)||(13493264-13493379)
chr1 (162-222)||(23990132-23990193)
chr1 (11-127)||(39546244-39546361)
chr1 (162-218)||(22447950-22448006)
chr1 (162-218)||(22453184-22453240)
chr1 (162-218)||(49148086-49148142)
chr1 (162-224)||(3087499-3087560)
chr1 (162-224)||(34066533-34066594)
chr1 (73-126)||(23990262-23990315)
chr1 (177-224)||(21110913-21110960)
chr1 (168-216)||(34732109-34732157)
chr1 (177-225)||(49852892-49852940)
chr1 (177-216)||(2405831-2405870)
chr1 (11-58)||(27282304-27282351)
chr1 (177-224)||(29642986-29643033)
chr1 (11-125)||(22456623-22456736)
chr1 (178-216)||(45941738-45941776)
[»] chr7 (31 HSPs)
chr7 (11-146)||(23313368-23313504)
chr7 (11-146)||(23107989-23108125)
chr7 (10-146)||(3862013-3862151)
chr7 (162-224)||(22083194-22083256)
chr7 (162-224)||(23313255-23313317)
chr7 (11-132)||(36222431-36222552)
chr7 (11-146)||(36843043-36843181)
chr7 (11-127)||(6967149-6967264)
chr7 (165-224)||(24423206-24423265)
chr7 (11-132)||(33312996-33313118)
chr7 (11-108)||(17863240-17863338)
chr7 (163-224)||(23108178-23108239)
chr7 (11-130)||(24783410-24783528)
chr7 (11-108)||(17866499-17866597)
chr7 (14-132)||(11279496-11279614)
chr7 (176-224)||(11397820-11397868)
chr7 (177-224)||(4595769-4595816)
chr7 (11-58)||(9765803-9765850)
chr7 (177-224)||(10345483-10345530)
chr7 (168-223)||(22952848-22952903)
chr7 (177-224)||(33844380-33844427)
chr7 (162-227)||(5241926-5241989)
chr7 (176-216)||(1960306-1960346)
chr7 (11-88)||(46846478-46846556)
chr7 (177-224)||(4695788-4695835)
chr7 (177-224)||(48645774-48645821)
chr7 (11-57)||(294866-294912)
chr7 (177-224)||(13809276-13809321)
chr7 (177-225)||(22611494-22611542)
chr7 (177-224)||(26153468-26153513)
chr7 (177-224)||(44363680-44363725)
[»] chr6 (38 HSPs)
chr6 (11-146)||(16883677-16883813)
chr6 (11-146)||(19664773-19664909)
chr6 (11-146)||(20527269-20527407)
chr6 (162-224)||(16731634-16731696)
chr6 (162-224)||(20189181-20189243)
chr6 (162-224)||(20527156-20527218)
chr6 (162-224)||(22146748-22146810)
chr6 (11-146)||(32427303-32427438)
chr6 (162-225)||(28118138-28118201)
chr6 (162-224)||(9313537-9313599)
chr6 (13-146)||(15540574-15540707)
chr6 (162-223)||(15578667-15578728)
chr6 (162-218)||(12983381-12983437)
chr6 (11-146)||(15535058-15535193)
chr6 (75-146)||(11183944-11184015)
chr6 (162-224)||(2773156-2773218)
chr6 (11-127)||(14790620-14790735)
chr6 (11-127)||(14795648-14795763)
chr6 (11-127)||(27649104-27649221)
chr6 (162-214)||(11183841-11183893)
chr6 (162-218)||(12980494-12980550)
chr6 (162-224)||(6514295-6514355)
chr6 (11-108)||(32704400-32704498)
chr6 (11-58)||(1838475-1838522)
chr6 (162-224)||(5260109-5260169)
chr6 (162-224)||(28111568-28111628)
chr6 (162-200)||(16883864-16883902)
chr6 (11-127)||(12980621-12980736)
chr6 (162-221)||(14281284-14281341)
chr6 (162-216)||(13005492-13005544)
chr6 (162-224)||(28107516-28107576)
chr6 (177-224)||(10290296-10290344)
chr6 (11-127)||(12983508-12983623)
chr6 (177-216)||(17106392-17106431)
chr6 (177-224)||(14966534-14966579)
chr6 (177-224)||(14970014-14970059)
chr6 (177-224)||(20186054-20186102)
chr6 (177-224)||(22149889-22149937)
[»] chr5 (16 HSPs)
chr5 (12-145)||(11988974-11989108)
chr5 (162-225)||(17944926-17944989)
chr5 (11-108)||(14616574-14616672)
chr5 (11-127)||(34405850-34405965)
chr5 (162-224)||(18239268-18239330)
chr5 (11-145)||(22159746-22159882)
chr5 (177-225)||(21332439-21332487)
chr5 (11-132)||(33575091-33575212)
chr5 (177-224)||(7271338-7271385)
chr5 (177-225)||(4099290-4099338)
chr5 (11-127)||(7650070-7650185)
chr5 (177-224)||(21335459-21335506)
chr5 (177-225)||(33552441-33552489)
chr5 (177-216)||(28787093-28787132)
chr5 (178-216)||(32838188-32838226)
chr5 (170-218)||(36357053-36357101)
[»] chr2 (17 HSPs)
chr2 (11-146)||(23673452-23673588)
chr2 (11-146)||(36326928-36327064)
chr2 (162-225)||(30720080-30720143)
chr2 (29-106)||(13710091-13710169)
chr2 (11-127)||(40017981-40018096)
chr2 (11-132)||(31626551-31626673)
chr2 (177-224)||(5666819-5666866)
chr2 (11-127)||(16294900-16295016)
chr2 (177-224)||(43724002-43724049)
chr2 (176-224)||(31427306-31427354)
chr2 (177-216)||(25138701-25138740)
chr2 (177-224)||(38460582-38460629)
chr2 (176-224)||(45454166-45454214)
chr2 (177-224)||(13971667-13971714)
chr2 (11-54)||(32575887-32575930)
chr2 (176-224)||(36808208-36808256)
chr2 (176-224)||(45457454-45457502)
[»] chr4 (31 HSPs)
chr4 (11-146)||(26062799-26062937)
chr4 (162-224)||(7394622-7394684)
chr4 (162-224)||(24604999-24605061)
chr4 (11-146)||(2541886-2542021)
chr4 (162-224)||(26060801-26060860)
chr4 (162-224)||(19859266-19859326)
chr4 (176-227)||(40795321-40795372)
chr4 (11-108)||(647349-647447)
chr4 (11-108)||(650621-650719)
chr4 (162-216)||(2436977-2437031)
chr4 (75-146)||(11649311-11649384)
chr4 (162-224)||(26703236-26703298)
chr4 (176-224)||(3797579-3797627)
chr4 (177-224)||(19821024-19821071)
chr4 (177-224)||(19827731-19827778)
chr4 (177-224)||(49270993-49271040)
chr4 (11-57)||(11649431-11649477)
chr4 (163-224)||(19864159-19864218)
chr4 (11-57)||(26060589-26060635)
chr4 (75-146)||(26060677-26060750)
chr4 (162-224)||(53094808-53094870)
chr4 (176-224)||(15404846-15404894)
chr4 (176-224)||(15811900-15811948)
chr4 (176-224)||(56195836-56195884)
chr4 (176-224)||(56199163-56199211)
chr4 (177-216)||(12786432-12786471)
chr4 (177-216)||(44165099-44165138)
chr4 (178-216)||(48415288-48415326)
chr4 (176-224)||(33927282-33927328)
chr4 (162-224)||(11649213-11649272)
chr4 (177-224)||(18860082-18860127)
[»] scaffold0134 (1 HSPs)
scaffold0134 (162-224)||(7542-7604)
[»] scaffold0363 (1 HSPs)
scaffold0363 (11-143)||(119-251)
[»] chr3 (17 HSPs)
chr3 (162-214)||(50096968-50097020)
chr3 (162-224)||(9155113-9155175)
chr3 (169-225)||(9158302-9158358)
chr3 (75-146)||(50096847-50096918)
chr3 (11-132)||(22626434-22626554)
chr3 (11-127)||(39563637-39563754)
chr3 (177-225)||(16244278-16244326)
chr3 (11-87)||(13979488-13979565)
chr3 (177-221)||(52309377-52309421)
chr3 (162-224)||(32287067-32287127)
chr3 (160-224)||(18551972-18552036)
chr3 (171-219)||(25260985-25261033)
chr3 (177-224)||(19304445-19304492)
chr3 (177-224)||(30219751-30219798)
chr3 (177-224)||(41977406-41977453)
chr3 (11-69)||(46731496-46731554)
chr3 (177-229)||(4250702-4250752)
[»] scaffold0996 (1 HSPs)
scaffold0996 (162-226)||(1681-1743)
[»] scaffold1657 (1 HSPs)
scaffold1657 (165-225)||(225-285)
[»] scaffold0440 (1 HSPs)
scaffold0440 (11-127)||(9865-9981)
[»] scaffold0567 (1 HSPs)
scaffold0567 (11-69)||(5996-6054)
[»] scaffold0520 (1 HSPs)
scaffold0520 (177-225)||(1303-1351)
[»] scaffold1063 (1 HSPs)
scaffold1063 (177-224)||(2807-2854)
[»] scaffold0080 (1 HSPs)
scaffold0080 (177-224)||(27431-27478)
[»] scaffold0045 (1 HSPs)
scaffold0045 (177-224)||(90080-90127)
[»] scaffold1809 (1 HSPs)
scaffold1809 (177-226)||(384-433)
[»] scaffold0330 (1 HSPs)
scaffold0330 (168-224)||(14235-14291)
[»] scaffold0757 (1 HSPs)
scaffold0757 (177-224)||(5672-5719)
[»] scaffold0352 (1 HSPs)
scaffold0352 (11-57)||(2801-2847)
[»] scaffold0496 (1 HSPs)
scaffold0496 (165-222)||(10134-10191)
[»] scaffold2073 (1 HSPs)
scaffold2073 (162-224)||(627-688)
[»] scaffold0014 (2 HSPs)
scaffold0014 (177-224)||(224023-224068)
scaffold0014 (177-224)||(228949-228994)


Alignment Details
Target: chr8 (Bit Score: 155; Significance: 3e-82; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 163 - 340
Target Start/End: Complemental strand, 41778799 - 41778621
Alignment:
Q  163 atacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatcactcgatagagtatttaatgatttagtgggagggtttgg 262  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41778799 atacgaacttataaattttattacttcgatatatttttagtacagttgctaaaagtctatcactcgagagagtatttaatgatttagtgggagggtttgg 41778700  T
Q  263 gtagctcaactcgtttgggtcaatgg-aataaaaaagttaaggagaaaaattctaatataacaactaaaatttgtcatt 340  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41778699 gtagctcaactcgtttgggtcaatggaaataaaaaagttaaggagaaaaattctaacataacaactaaaatttgtcatt 41778621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 41778988 - 41778850
Alignment:
Q  8 tagcataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatcaatcttttattgtttttaattcgtttatgttacaaa 107  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41778988 tagcataggagaacttcggaagatttgaaggtcttaaccatacttctctttaatcttctaaatcaatcttttattgtttttaattcgtttatgttacaaa 41778889  T
Q  108 aatcaattcaactgcctaggacacccttgaatttaatac 146  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  41778888 aatcaattcaactgcctagggcacccttgaatttaatac 41778850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 12575535 - 12575407
Alignment:
Q  19 aacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatc-aatcttttattgtttttaattcgtttatgttacaaaaatcaattca 117  Q
    ||||||||||||||  | |||||||||||||||||||||| || ||||||| | ||||||||||||||||||||   ||||||||||||||||||| |||    
T  12575535 aacttcggaggattcaatggtcttaaccatacttctctctaattttctaaaaccaatcttttattgtttttaatcaatttatgttacaaaaatcaactca 12575436  T
Q  118 actgcctaggacacccttgaatttaatac 146  Q
    |||||||||| |||| |||||||||||||    
T  12575435 actgcctagggcaccattgaatttaatac 12575407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 13097022 - 13097163
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatc-aatcttttattg-tttttaatt----cgtttatgttac 104  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||||| || ||||||| | |||||||||||| ||||| |||    | ||||||||||    
T  13097022 cataggataacttcggaggattcgaaggtcttaaccatacttctctctaattttctaaaactaatcttttattgtttttttattatcacttttatgttac 13097121  T
Q  105 aaaaatcaattcaactgcctaggacacccttgaatttaatac 146  Q
    | ||| |||||||||| | |||| |||| |||||||||||||    
T  13097122 acaaaccaattcaactccataggccaccattgaatttaatac 13097163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 14418467 - 14418599
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttc-taaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    |||||||||| |||||||||||  || ||||||||||||||||||||| || ||| |||| | | |||||||||||||||||| |||||||||  |||||    
T  14418467 cataggagaaattcggaggattcgaatgtcttaaccatacttctctctaatattcttaaaaccaacttttattgtttttaatttgtttatgtt--aaaaa 14418564  T
Q  110 tcaattcaactgcctaggac-acccttgaatttaa 143  Q
     ||| ||||||||||||| | ||| ||||||||||    
T  14418565 ccaactcaactgcctagggcaaccattgaatttaa 14418599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 44008478 - 44008539
Alignment:
Q  163 atacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  44008478 atacgaacttataaattttattactttgatatatttttagtacacttgttaaaagtctatca 44008539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 13097215 - 13097275
Alignment:
Q  163 atacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  13097215 atacgaact-ataaattttattacttcgatatatttttagtacacttgctaaaagtttatca 13097275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 587618 - 587681
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatcac 225  Q
    ||||||||||||||||||||||||||||| |||||||||  |||||||| |||||| |||||||    
T  587618 gatacgaacttataaattttattacttcgttatatttttaatacacttgttaaaagactatcac 587681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 626304 - 626241
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatcac 225  Q
    ||||||||||||||||||||||||||||| |||||||||  |||||||| |||||| |||||||    
T  626304 gatacgaacttataaattttattacttcgttatatttttaatacacttgttaaaagactatcac 626241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 12820703 - 12820640
Alignment:
Q  162 gatacgaactt-ataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||    
T  12820703 gatacgaactttataaattttattacttcgatatatttttagcacacttgctaaaagtttatca 12820640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 37681343 - 37681283
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||| |||||||||||||||||||||||  ||||| || |||||||||||||||||||||||    
T  37681343 gatacaaacttataaattttattacttcg--atattattagtacacttgctaaaagtctatca 37681283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 41836373 - 41836300
Alignment:
Q  75 cttttattgtttttaattcgtttatgttacaaaaatcaattcaactgcctagg--acacccttgaatttaatac 146  Q
    ||||||||||||||| ||||||||| |||||||| |||| |||||||||||||  ||||| |||||||| ||||    
T  41836373 cttttattgtttttatttcgtttatattacaaaagtcaactcaactgcctagggcacaccattgaattttatac 41836300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 14349300 - 14349356
Alignment:
Q  168 aacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||  |||||||||||||| |||||| ||||||||| |||||||||||||    
T  14349300 aacttataaaaattattacttcgatacatttttagtacacttgttaaaagtctatca 14349356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 33883162 - 33883114
Alignment:
Q  176 aattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||    
T  33883162 aattttattacttcgatgcatttttagtacacttgctaaaagtctatca 33883114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 45155092 - 45155031
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgct-aaaagtctatca 224  Q
    |||||||||||||||||||||||||||||  ||| |||| ||||||||||| ||||||||||||    
T  45155092 gatacgaacttataaattttattacttcg--atagttttagtacacttgctaaaaagtctatca 45155031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 5538582 - 5538535
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||| |||||| ||||||||||||||| |||||||    
T  5538582 attttattacttcgatacatttttagtacacttgctaaaaatctatca 5538535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 12583328 - 12583375
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||||||    
T  12583328 attttattatttcgatacatttttagtacacttgctaaaagtctatca 12583375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 41836466 - 41836420
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctc 57  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||    
T  41836466 cataggagaacttcggaggattcgaaggtcttaaccatgcttctctc 41836420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 43681697 - 43681653
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtcta 221  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||    
T  43681697 attttattacttcgatgcatttttagtacacttgctaaaagtcta 43681653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 36710460 - 36710400
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||| |||||||||| |  ||| | || |||||||||||||||||||||||    
T  36710460 gatacgaacttataaactttattactttg--atagtcttagtacacttgctaaaagtctatca 36710400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 25231378 - 25231429
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaa 215  Q
    |||||||||||||||| ||||||||||||  ||| |||| ||||||||||||||    
T  25231378 gatacgaacttataaaatttattacttcg--atagttttagtacacttgctaaa 25231429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 27805413 - 27805359
Alignment:
Q  170 cttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||| || |||  |||||| ||||||||||||||||| |||||    
T  27805413 cttataaattttattattttgatgcatttttagtacacttgctaaaagtttatca 27805359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 44008360 - 44008426
Alignment:
Q  80 attgtttttaattcgtttatgttacaaaaatcaattcaactgcctaggacacccttgaatttaatac 146  Q
    |||| ||||||| | ||| ||||||| ||||||| ||||||| ||||| |||| |||||||||||||    
T  44008360 attgcttttaatccttttttgttacataaatcaaatcaactgtctagggcaccattgaatttaatac 44008426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 29613001 - 29612948
Alignment:
Q  171 ttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||| |||| |||  ||||||  ||||||||||||||||||||||    
T  29613001 ttataaattttatcactttgatgcatttttaatacacttgctaaaagtctatca 29612948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 3604719 - 3604663
Alignment:
Q  167 gaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatc 223  Q
    ||||||||||||||||||| ||||||  |||||| ||| ||||| ||||| ||||||    
T  3604719 gaacttataaattttattatttcgatgcatttttagtaaacttgttaaaaatctatc 3604663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 31981664 - 31981709
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||   |||| |||||||||||||||||||||||    
T  31981664 attttattacttcgatag--ttttagtacacttgctaaaagtctatca 31981709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 31986591 - 31986636
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||   |||| |||||||||||||||||||||||    
T  31986591 attttattacttcgatag--ttttagtacacttgctaaaagtctatca 31986636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 41836261 - 41836202
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||   |||||||| ||||||| |||||| |||  ||||||||||||||||||    
T  41836261 gatacgaacttat---ttttattatttcgatacatttttagtattcttgctaaaagtctatca 41836202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 34066346 - 34066482
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatc-aatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| || ||||||| | ||||||||||||||||||||||||||||||||||||||    
T  34066346 cataggagaacttcggaggattcgaaggtcttaaccatacttctctctaattttctaaaaccaatcttttattgtttttaattcgtttatgttacaaaaa 34066445  T
Q  110 tcaattcaactgcctaggacacccttgaatttaatac 146  Q
    |||||||||||||||||| ||||||||||||||||||    
T  34066446 tcaattcaactgcctagggcacccttgaatttaatac 34066482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 16190421 - 16190286
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatc-aatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| | || ||||||| | ||||||| |||||||||||||||||||||||||||| |    
T  16190421 cataggagaacttcggaggattcgaaggtcttaaccatacttctctttaattttctaaaaccaatcttt-attgtttttaattcgtttatgttacaaaca 16190323  T
Q  110 tcaattcaactgcctaggacacccttgaatttaatac 146  Q
    |||| |||| | |||||| |||| |||||||||||||    
T  16190322 tcaactcaatttcctagggcaccattgaatttaatac 16190286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 13495989 - 13496107
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct--aaatcaatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| || ||||  ||||||| |||||||||||||   | ||||||||||||||||    
T  13495989 cataggagaacttcggaggattcaaaggtcttaaccatacttctctctaatattcttaaaatcaa-cttttattgttttatttacgtttatgttacaaaa 13496087  T
Q  109 atcaattcaactgcctaggaca 130  Q
      ||||||||||||||||||||    
T  13496088 --caattcaactgcctaggaca 13496107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 1936628 - 1936767
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattc-gtttatgttacaaaa 108  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| || |||| ||| |||  |||||  ||||||||||| ||||||| ||||| |    
T  1936628 cataggagaacttcggaggattcgaaggtcttaaccatacttctctctaattttctaaaaccaaaattttaccgtttttaattcagtttatgatacaaca 1936727  T
Q  109 atcaattcaactgcctaggaca--cccttgaatttaatac 146  Q
    ||||| ||||||||||||| ||  || |||||||||||||    
T  1936728 atcaactcaactgcctaggtcaacccattgaatttaatac 1936767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 8435428 - 8435486
Alignment:
Q  166 cgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  8435428 cgaacttataaattttattacttcgatatatttttagtacacttgctaaaagtttatca 8435486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 32506098 - 32506000
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttc-taaatcaatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||| | || ||| |||| | | ||||||||||||||||||||||||||||| ||||    
T  32506098 cataggagaacttcggaggattcgaaggtcttaaccacacttctctataatattcttaaaaccaacttttattgtttttaattcgtttatgttagaaaa 32506000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 17618914 - 17618857
Alignment:
Q  167 gaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  17618914 gaacttataaattttattacttcgatatatttttagtacatttgctaaaagtctatca 17618857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 22456550 - 22456494
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagt 218  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  22456550 gatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagt 22456494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 8435302 - 8435373
Alignment:
Q  75 cttttattgtttttaattcgtttatgttacaaaaatcaattcaactgcctaggacacccttgaatttaatac 146  Q
    ||||||||||||||| |  |||||||||||||||||||| ||||||||||||| ||| ||||||||||||||    
T  8435302 cttttattgtttttattatgtttatgttacaaaaatcaactcaactgcctagggcactcttgaatttaatac 8435373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 10764921 - 10765036
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    |||||||||||||| |||||||  |||||||||||||||||||||||| || |||| ||| | | |||||||||||||   | ||||||||||||||||     
T  10764921 cataggagaacttcagaggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaa- 10765019  T
Q  110 tcaattcaactgcctagg 127  Q
     ||| |||||||||||||    
T  10765020 -caactcaactgcctagg 10765036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 13493264 - 13493379
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    |||||||||||||| |||||||  |||||||||||||||||||||||| || |||| ||| | | |||||||||||||   | ||||||||||||||||     
T  13493264 cataggagaacttcagaggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaa- 13493362  T
Q  110 tcaattcaactgcctagg 127  Q
     ||| |||||||||||||    
T  13493363 -caactcaactgcctagg 13493379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 23990193 - 23990132
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatat-ttttcgtacacttgctaaaagtctat 222  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  23990193 gatacgaacttataaatttgattacttcgatatattttttagtacacttgctaaaagtctat 23990132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 39546244 - 39546361
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgat-cttctaaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||| ||  || |||| | | |||||||||||||   | |||||| ||||||||||    
T  39546244 catatgagaacttcggaggattcgaaggtcttaaccatacttctctctaatatttttaaaaccaacttttattgttttatttgcgtttacgttacaaaaa 39546343  T
Q  110 tcaattcaactgcctagg 127  Q
     |||| ||||||||||||    
T  39546344 ccaatccaactgcctagg 39546361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 22448006 - 22447950
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagt 218  Q
    |||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  22448006 gatatgaacttataaattttattacttcgatttatttttagtacacttgctaaaagt 22447950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 22453240 - 22453184
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagt 218  Q
    |||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  22453240 gatatgaacttataaattttattacttcgatttatttttagtacacttgctaaaagt 22453184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 49148086 - 49148142
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagt 218  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  49148086 gatacgaacttataaattttattacttcgatttatttttagtacacttactaaaagt 49148142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 3087560 - 3087499
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||    
T  3087560 gatacaaacttataaattttattacttcgatata-ttttagtacacttgttaaaagtctatca 3087499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 34066533 - 34066594
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| |||||||| |||||    
T  34066533 gatacgaacttataaattttattacttcgatata-ttttagtacacttactaaaagtttatca 34066594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 23990315 - 23990262
Alignment:
Q  73 atcttttattgtttttaattcgtttatgttacaaaaatcaattcaactgcctag 126  Q
    ||||||||||||||||||| ||| |||||||||||||| || ||||||||||||    
T  23990315 atcttttattgtttttaatccgtatatgttacaaaaattaactcaactgcctag 23990262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 21110960 - 21110913
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||    
T  21110960 attttattacttcgatgcatttttagtacacttgctaaaagtctatca 21110913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 34732157 - 34732109
Alignment:
Q  168 aacttataaattttattacttcgatatatttttcgtacacttgctaaaa 216  Q
    ||||||||||||||||||||||| |  |||||| |||||||||||||||    
T  34732157 aacttataaattttattacttcggttcatttttagtacacttgctaaaa 34732109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 49852940 - 49852892
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatcac 225  Q
    ||||||||||||||||| |||||| ||||||||||||||| | ||||||    
T  49852940 attttattacttcgatacatttttagtacacttgctaaaattgtatcac 49852892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 2405831 - 2405870
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaa 216  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  2405831 attttattacttcgatacatttttagtacacttgctaaaa 2405870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 27282351 - 27282304
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctct 58  Q
    |||||||||||||||||| |||  || |||||||||||||||||||||    
T  27282351 cataggagaacttcggagaattcgaaagtcttaaccatacttctctct 27282304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 29643033 - 29642986
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||| ||  |||||| |||||||||||||||||||||||    
T  29643033 attttattacttcaatgcatttttagtacacttgctaaaagtctatca 29642986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 22456736 - 22456623
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatcaatcttttattgtttttaattcgtttatgttacaaaaat 110  Q
    ||||||||||||||||||||||  |||||||| |||||  |||||| | || | |  || ||| ||||||| |||||||| | |||||| ||| |||||     
T  22456736 cataggagaacttcggaggattcgaaggtcttgaccatttttctctttaatttccagaaccaagcttttatcgtttttaaatagtttat-ttataaaaac 22456638  T
Q  111 caattcaactgccta 125  Q
    |||| ||||||||||    
T  22456637 caatccaactgccta 22456623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 45941738 - 45941776
Alignment:
Q  178 ttttattacttcgatatatttttcgtacacttgctaaaa 216  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  45941738 ttttattacttcgatacatttttagtacacttgctaaaa 45941776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 23313504 - 23313368
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatcaat-cttttattgtttttaattcgtttatgttacaaaaa 109  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| || ||||||| | || |||||||||||||||||||||||||||||||||||    
T  23313504 cataggagaacttcggaggattcaaaggtcttaaccatacttctctctaattttctaaaaccattcttttattgtttttaattcgtttatgttacaaaaa 23313405  T
Q  110 tcaattcaactgcctaggacacccttgaatttaatac 146  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  23313404 tcaattcaactacctagggcacccttgaatttaatac 23313368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 23107989 - 23108125
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatc-aatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    ||||||||| ||||||| ||||  ||||||||||||| | |||||||| || ||||||| | |||||||||||||||||||||||||||||||||||| |    
T  23107989 cataggagagcttcggatgattcgaaggtcttaaccacatttctctctaattttctaaaaccaatcttttattgtttttaattcgtttatgttacaaaca 23108088  T
Q  110 tcaattcaactgcctaggacacccttgaatttaatac 146  Q
    |||| ||||||| |||||||| ||||||||| |||||    
T  23108089 tcaactcaactgtctaggacatccttgaattaaatac 23108125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 146
Target Start/End: Complemental strand, 3862151 - 3862013
Alignment:
Q  10 gcataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttac-aaa 107  Q
    |||||||||||||||| ||||||  |||||||||| ||||||||||||| || || | ||| |||||||||||||||||||||  ||||||||||| |||    
T  3862151 gcataggagaacttcgaaggattcgaaggtcttaatcatacttctctctaattttataaaaccaatcttttattgtttttaatcagtttatgttacaaaa 3862052  T
Q  108 aatcaattcaactgcctaggacacccttgaatttaatac 146  Q
    |||||||| ||||||||||| || | |||||||||||||    
T  3862051 aatcaattgaactgcctagggcatcattgaatttaatac 3862013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 22083256 - 22083194
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  22083256 gatacgaacttataaattttattgcttcgatataattttagtacacttgctaaaagtctatca 22083194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 23313317 - 23313255
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  23313317 gatatgaacttataaattttattatttcgatatatttttagtacacttgctaaaagtctatca 23313255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 36222552 - 36222431
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct--aaatcaatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||||  |||||||  ||| ||||||||  |||||||||||  ||||||||||  |||    
T  36222552 cataggagaacttcggaggattcgaaggacttaaccatacttctctc-aatcttctaaaaaccaatctttctttgtttttaatcagtttatgtta-gaaa 36222455  T
Q  109 atcaattcaactgcctaggacacc 132  Q
    ||||| ||||||||||||| ||||    
T  36222454 atcaactcaactgcctagggcacc 36222431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 36843181 - 36843043
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttc-taaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| || ||| |||| | | |||||||||||||   | ||||||  ||| |||||    
T  36843181 cataggagaacttcggaggattcgaaggtcttaaccatacttctctctaatattcataaaaccaacttttattgttttatttacgtttactttataaaaa 36843082  T
Q  110 tcaattcaactgcctagg--acacccttgaatttaatac 146  Q
     |||| ||||||||||||  | ||| |||||||||||||    
T  36843081 ccaatccaactgcctagggcaaaccattgaatttaatac 36843043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 6967149 - 6967264
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    |||||||||||||| |||||||  |||||||||||||||||||||||| || |||| ||| | | |||||||||||||   | ||||||||||||||||     
T  6967149 cataggagaacttcagaggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaa- 6967247  T
Q  110 tcaattcaactgcctagg 127  Q
     ||| |||||||||||||    
T  6967248 -caactcaactgcctagg 6967264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 24423265 - 24423206
Alignment:
Q  165 acgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||| |||||    
T  24423265 acgaacttataaattttattacttcaatgtatttttagtacacttgctaaaagtatatca 24423206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 33312996 - 33313118
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatc-aatcttttattgtttttaattc-gtttatgttacaaaa 108  Q
    ||||||||| |||| |||||||  |||| |||||||||  ||||||| ||| ||||||| | |||| |||||| |||||||||| |||||||||||||||    
T  33312996 cataggagagcttcagaggattcgaaggacttaaccatttttctctcagattttctaaaaccaatcctttattatttttaattccgtttatgttacaaaa 33313095  T
Q  109 atcaattcaactgcctaggacacc 132  Q
     |||| ||||||||||||| ||||    
T  33313096 -tcaactcaactgcctagggcacc 33313118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 17863338 - 17863240
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    |||||||||||||| |||||||  |||||||||||||||||||||||| || |||| ||| | | |||||||||||||   | ||||||||||||||||    
T  17863338 cataggagaacttcagaggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaa 17863240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 23108178 - 23108239
Alignment:
Q  163 atacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||| ||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||    
T  23108178 atacaaacttataaattttattactttgatatatttttagtacagttgctaaaagtgtatca 23108239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 24783410 - 24783528
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttc-taaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||| || ||| |||| | | |||||||||||||   |  |||||||||||||||     
T  24783410 catatgagaacttcggaggattcaaaggtcttaaccatacttctctctaatattcttaaaaccaacttttattgttttatttaagtttatgttacaaaa- 24783508  T
Q  110 tcaattcaactgcctaggaca 130  Q
     ||| |||||||||| |||||    
T  24783509 -caactcaactgccttggaca 24783528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 17866597 - 17866499
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    |||||||||||||| |||||||  ||||||| |||||||||||||||| || |||| ||| | | |||||||||||||   | ||||||||||||||||    
T  17866597 cataggagaacttcagaggattcgaaggtctaaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaa 17866499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 11279496 - 11279614
Alignment:
Q  14 aggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct--aaatcaatcttttattgtttttaattcgtttatgttacaaaaatc 111  Q
    |||||||||||| | ||||  |||| ||||||||||||||||||  |||||||  ||| ||||||||  | |||||||||  ||||||||||| ||||||    
T  11279496 aggagaacttcgaaagattcgaaggacttaaccatacttctctc-aatcttctaaaaaccaatctttattcgtttttaatcagtttatgttac-aaaatc 11279593  T
Q  112 aattcaactgcctaggacacc 132  Q
    || ||||||||||||| ||||    
T  11279594 aactcaactgcctagggcacc 11279614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 11397868 - 11397820
Alignment:
Q  176 aattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||    
T  11397868 aattttattacttcgatgcatttttagtacacttgctaaaagtctatca 11397820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 4595816 - 4595769
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||    
T  4595816 attttattacttcgatgcatttttagtacacttgctaaaagtctatca 4595769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 9765803 - 9765850
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctct 58  Q
    |||||||||||||| |||||||  ||||||||||||||||||||||||    
T  9765803 cataggagaacttcagaggattcgaaggtcttaaccatacttctctct 9765850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 10345483 - 10345530
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||| |||||| ||||||||||||||| |||||||    
T  10345483 attttattacttcgatacatttttagtacacttgctaaaattctatca 10345530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 22952848 - 22952903
Alignment:
Q  168 aacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatc 223  Q
    |||||||||||||||||||||||||  |||||| ||||||| || |||||||||||    
T  22952848 aacttataaattttattacttcgatgcatttttagtacactcgcaaaaagtctatc 22952903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 33844427 - 33844380
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||||    
T  33844427 attttattacttcgatacatttttagcacacttgctaaaagtctatca 33844380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 5241989 - 5241926
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatcactc 227  Q
    ||||| |||||||||||||||||||||||  ||  |||| ||||||||| ||||||||||||||||    
T  5241989 gatacaaacttataaattttattacttcg--atggttttagtacacttgataaaagtctatcactc 5241926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 1960306 - 1960346
Alignment:
Q  176 aattttattacttcgatatatttttcgtacacttgctaaaa 216  Q
    ||||||||||||| ||||||||||| |||||||||||||||    
T  1960306 aattttattactttgatatatttttagtacacttgctaaaa 1960346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 46846556 - 46846478
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct--aaatcaatcttttattgttttt 88  Q
    ||||| ||||||||||||||||  |||| ||||||||||||||||||  || ||||  ||| ||||||||||||||||||    
T  46846556 catagaagaacttcggaggattcgaaggacttaaccatacttctctc-aattttctaaaaaccaatcttttattgttttt 46846478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 4695788 - 4695835
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||  ||||||  ||||||||||||||||||||||    
T  4695788 attttattacttcgatgcatttttaatacacttgctaaaagtctatca 4695835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 48645774 - 48645821
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||  |||||| ||||||||||||||||| |||||    
T  48645774 attttattacttcgatgcatttttagtacacttgctaaaagtttatca 48645821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 294866 - 294912
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctc 57  Q
    ||||||||||||||||||||||  || | ||||||||||||||||||    
T  294866 cataggagaacttcggaggattcgaaagacttaaccatacttctctc 294912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 13809321 - 13809276
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||   |||| |||||||||||||||||||||||    
T  13809321 attttattacttcgatag--ttttagtacacttgctaaaagtctatca 13809276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 22611542 - 22611494
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatcac 225  Q
    ||||||||||||||||  |||||| |||||||| |||||| ||||||||    
T  22611542 attttattacttcgatgcatttttagtacacttactaaaaatctatcac 22611494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 26153468 - 26153513
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||   |||| |||||||||||||||||||||||    
T  26153468 attttattacttcgatag--ttttagtacacttgctaaaagtctatca 26153513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 44363680 - 44363725
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||||  |||| ||||||||||||||||| |||||    
T  44363680 attttattacttcgatat--ttttagtacacttgctaaaagtttatca 44363725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 16883677 - 16883813
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatc-aatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    ||||||||||||||| ||||||  || ||||||||||||||||||||| || ||||||| | ||||||||||||||||||||||||||||||||||||||    
T  16883677 cataggagaacttcgaaggattcgaatgtcttaaccatacttctctctaattttctaaaaccaatcttttattgtttttaattcgtttatgttacaaaaa 16883776  T
Q  110 tcaattcaactgcctaggacacccttgaatttaatac 146  Q
    ||||||||||||||||||  |||||||||||||||||    
T  16883777 tcaattcaactgcctagggaacccttgaatttaatac 16883813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 19664909 - 19664773
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||| || |||| ||| ||| ||||||||||||||||| ||||||| ||||||| |    
T  19664909 cataggagaacttcggaggattcgaaggtcttaaccatacatctctctaattttcttaaaccaaacttttattgtttttaatccgtttattttacaaata 19664810  T
Q  110 tcaattcaactgcctaggacacccttgaatttaatac 146  Q
     |||| |||||||||||| || |||||||||||||||    
T  19664809 ccaatccaactgcctagggcaaccttgaatttaatac 19664773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 20527407 - 20527269
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttc-taaatcaatcttttattgtttttaatt-cgtttatgttacaaaa 108  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| || ||| |||| | | ||||||||||||||| ||  ||||| |||||||||    
T  20527407 cataggagaacttcggaggattcgaaggtcttaaccatacttctctctaatattcttaaaaccaacttttattgtttttatttatgtttacgttacaaaa 20527308  T
Q  109 atcaattcaactgcctaggac-acccttgaatttaatac 146  Q
    ||||||||||||||||||| | ||| |||||||||||||    
T  20527307 atcaattcaactgcctagggcaacctttgaatttaatac 20527269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 16731634 - 16731696
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16731634 gatacgaacttataaattttattacttcgatatatttttagtacacttgctaaaagtctatca 16731696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 20189243 - 20189181
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  20189243 gatacgaacttataaattttattacttcgatatatttttaatacacttgctaaaagtctatca 20189181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 20527218 - 20527156
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  20527218 gatacgaacttataaattttattacttcgatatatttgtagtacacttgctaaaagtctatca 20527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 22146748 - 22146810
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  22146748 gatacgaacttataaattttattacttcgatatatttttaatacacttgctaaaagtctatca 22146810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 32427303 - 32427438
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatc-aatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    |||||||||||||| |||||||  |||||||||| || || ||||||| || ||||||| | || |||| |||||||||||||||||||| ||||||| |    
T  32427303 cataggagaacttcagaggattcaaaggtcttaatcaaacatctctctaattttctaaaaccaaactttcattgtttttaattcgtttattttacaaata 32427402  T
Q  110 tcaattcaactgcctaggacacccttgaatttaatac 146  Q
     |||| |||||| ||||| || |||||||||||||||    
T  32427403 ccaatccaactg-ctagggcaaccttgaatttaatac 32427438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 28118138 - 28118201
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatcac 225  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||    
T  28118138 gatacgaacttataaattttattacttcgatatatttttaatacacttgctaaaagtttatcac 28118201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 9313599 - 9313537
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  9313599 gatacgaacttataaattttattacttcgatatatttttagtacacttgttaaaagtttatca 9313537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 15540574 - 15540707
Alignment:
Q  13 taggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatc-aatcttttattgtttttaattcgtttatgttacaaaaatc 111  Q
    ||||||||||||||||||||  |||||||||||||||  ||||| | || ||||||| | || ||||||||||||||||| | ||||| |||  ||||||    
T  15540574 taggagaacttcggaggattcgaaggtcttaaccataaatctctttaattttctaaaactaaacttttattgtttttaatccctttatttta-gaaaatc 15540672  T
Q  112 aattcaactgcctaggacacccttgaatttaatac 146  Q
    || |||||||||||||  | |||||||||||||||    
T  15540673 aactcaactgcctagggaaaccttgaatttaatac 15540707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 15578728 - 15578667
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatc 223  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  15578728 gatacgaacttataaattttattccttcgatatatttttaatacacttgctaaaagtctatc 15578667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 12983437 - 12983381
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagt 218  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  12983437 gatacgaacttataaattttattacttcgatttatttttagtacacttgctaaaagt 12983381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 15535058 - 15535193
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    ||||||| ||||||||||||||| |||||||||||||||| || || | || || | ||| ||| |||||||||||||||||   ||| | |||| ||||    
T  15535058 cataggaaaacttcggaggatttgaaggtcttaaccatacatcactttaattttgtaaaaccaaacttttattgtttttaatctatttgttttac-aaaa 15535156  T
Q  110 tcaattcaactgcctaggacacccttgaatttaatac 146  Q
    |||| ||||||||||||| || |||||||||||||||    
T  15535157 tcaactcaactgcctagggcaaccttgaatttaatac 15535193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 11184015 - 11183944
Alignment:
Q  75 cttttattgtttttaattcgtttatgttacaaaaatcaattcaactgcctaggacacccttgaatttaatac 146  Q
    ||||||||||||||| | ||||||||||||||||||||| |||||||||||||  || ||||||||||||||    
T  11184015 cttttattgtttttattacgtttatgttacaaaaatcaactcaactgcctagggaactcttgaatttaatac 11183944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 2773218 - 2773156
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||| ||||||||||||  |||||| |||||||||||||||||||||||    
T  2773218 gatacgaacttataaattatattacttcgattcatttttagtacacttgctaaaagtctatca 2773156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 14790620 - 14790735
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    |||||||||||||| |||||||  |||||||||||||||||||||||| || |||| ||| | | |||||||||||||   | ||||||||||||||||     
T  14790620 cataggagaacttcagaggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaa- 14790718  T
Q  110 tcaattcaactgcctagg 127  Q
     ||| |||||||||||||    
T  14790719 -caactcaactgcctagg 14790735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 14795648 - 14795763
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    |||||||||||||| |||||||  |||||||||||||||||||||||| || |||| ||| | | |||||||||||||   | ||||||||||||||||     
T  14795648 cataggagaacttcagaggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaa- 14795746  T
Q  110 tcaattcaactgcctagg 127  Q
     ||| |||||||||||||    
T  14795747 -caactcaactgcctagg 14795763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 27649104 - 27649221
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttc-taaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||| || ||| |||| | | ||||||||||||    | ||||||||||| |||||    
T  27649104 cataggagaacttcggaggattcgaaggtcttaaccatacttcgctctaattttcttaaaaccaacttttattgtttcatctacgtttatgttataaaaa 27649203  T
Q  110 tcaattcaactgcctagg 127  Q
     |||| ||||||||||||    
T  27649204 ccaatccaactgcctagg 27649221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 11183893 - 11183841
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaa 214  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  11183893 gatatgaacttataaattttattacttcgatatatttttagtacacttgctaa 11183841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 12980550 - 12980494
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagt 218  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  12980550 gatacgaacttataaattttattacttcaatttatttttagtacacttgctaaaagt 12980494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 6514295 - 6514355
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||||||||||||||  ||| |||| |||||||||||||||||||||||    
T  6514295 gatacgaacttataaattttattacttcg--atagttttagtacacttgctaaaagtctatca 6514355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 32704498 - 32704400
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    |||||||||||||| |||||||  |||||||||||||||||||||||| || |||| ||| | | |||||||||||||   | ||||||||||||||||    
T  32704498 cataggagaacttcagaggattcgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaa 32704400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 1838475 - 1838522
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctct 58  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  1838475 cataggagaacttcggaggattcgaaggtcttaaccatacttctctct 1838522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 5260109 - 5260169
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||||||||||||||  ||| |||| ||||| |||||||||||||||||    
T  5260109 gatacgaacttataaattttattacttcg--atagttttagtacatttgctaaaagtctatca 5260169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 28111628 - 28111568
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||||||||||||||  ||| |||| ||||||||||||||||| |||||    
T  28111628 gatacgaacttataaattttattacttcg--atagttttagtacacttgctaaaagtttatca 28111568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 16883864 - 16883902
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatattttt 200  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16883864 gatacgaacttataaattttattacttcgatatattttt 16883902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 12980736 - 12980621
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatcaatcttttattgtttttaattcgtttatgttacaaaaat 110  Q
    ||||||||||||||||||||||  |||||||| |||||  |||||| | || |||  || ||| ||||||| |||||||| | |||||| ||| |||||     
T  12980736 cataggagaacttcggaggattcgaaggtcttgaccatttttctctttaattttcagaaccaagcttttatcgtttttaaatagtttat-ttataaaaac 12980638  T
Q  111 caattcaactgcctagg 127  Q
    |||| ||||||||||||    
T  12980637 caatccaactgcctagg 12980621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 14281341 - 14281284
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtcta 221  Q
    ||||| ||||||||||||||||||||||  |||| |||| ||||||||||||||||||||    
T  14281341 gatacaaacttataaattttattacttc--tatagttttagtacacttgctaaaagtcta 14281284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 13005492 - 13005544
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaa 216  Q
    |||||||||||||||||||||||||||||  ||| |||| |||||||||||||||    
T  13005492 gatacgaacttataaattttattacttcg--atagttttagtacacttgctaaaa 13005544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 28107576 - 28107516
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||||||||||||||  ||| |||| ||||||||| ||||||| |||||    
T  28107576 gatacgaacttataaattttattacttcg--atagttttagtacacttgttaaaagtttatca 28107516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 10290296 - 10290344
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgct-aaaagtctatca 224  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  10290296 attttattacttcgatacatttttagtacacttgctaaaaagtctatca 10290344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 12983623 - 12983508
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatcaatcttttattgtttttaattcgtttatgttacaaaaat 110  Q
    ||||||||||||||||||||||  |||||||| |||||  |||||| | || | |  || ||| ||||||| |||||||| | |||||| ||| |||||     
T  12983623 cataggagaacttcggaggattcgaaggtcttgaccatttttctctttaatttccagaaccaagcttttatcgtttttaaatagtttat-ttataaaaac 12983525  T
Q  111 caattcaactgcctagg 127  Q
    |||| ||||||||||||    
T  12983524 caatccaactgcctagg 12983508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 17106431 - 17106392
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaa 216  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  17106431 attttattacttcgatacatttttagtacacttgctaaaa 17106392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 14966534 - 14966579
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||   |||| |||||||||||||||||||||||    
T  14966534 attttattacttcgatag--ttttagtacacttgctaaaagtctatca 14966579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 14970014 - 14970059
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||   |||| |||||||||||||||||||||||    
T  14970014 attttattacttcgatag--ttttagtacacttgctaaaagtctatca 14970059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 20186054 - 20186102
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgct-aaaagtctatca 224  Q
    ||||||||||||||||| |||||| || |||||||| ||||||||||||    
T  20186054 attttattacttcgatacatttttagtgcacttgctaaaaagtctatca 20186102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 22149937 - 22149889
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgct-aaaagtctatca 224  Q
    ||||||||||||||||| |||||| || |||||||| ||||||||||||    
T  22149937 attttattacttcgatacatttttagtgcacttgctaaaaagtctatca 22149889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 11989108 - 11988974
Alignment:
Q  12 ataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaa-tcaatcttttattgtttttaattcgtttatgttacaaaaat 110  Q
    |||||||||||| ||||||||  |||||||||||| ||||||||||| || ||||||| |||||||||||| |||||||||  |||||||||||||||||    
T  11989108 ataggagaactttggaggattcgaaggtcttaaccttacttctctctaattttctaaaatcaatcttttatcgtttttaatctgtttatgttacaaaaat 11989009  T
Q  111 caattcaactgcctaggacacccttgaatttaata 145  Q
    ||| |||||||||||||  ||| ||||||||||||    
T  11989008 caactcaactgcctaggggaccattgaatttaata 11988974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 17944926 - 17944989
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatcac 225  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  17944926 gatacgaacttataaattttattacttcgatatatttttagtacacttgctaaaagtttatcac 17944989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 14616672 - 14616574
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct--aaatcaatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||| || ||||  ||||||| |||||||||||||   | ||||||||||||||||    
T  14616672 cataggagaacttcggaggattcaaaggtcttaaccatacttctctctaatattcttaaaatcaa-cttttattgttttatttacgtttatgttacaaaa 14616574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 34405850 - 34405965
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||| || |||| ||| | | |||||||||||||   | ||||||||||||| ||     
T  34405850 cataggagaacttcagaggatttgaaggtcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacacaa- 34405948  T
Q  110 tcaattcaactgcctagg 127  Q
     ||| |||||||||||||    
T  34405949 -caactcaactgcctagg 34405965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 18239330 - 18239268
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||||||||||||||||  ||||||  |||||||||||||||| |||||    
T  18239330 gatacgaacttataaattttattacttcgattcatttttaatacacttgctaaaagtttatca 18239268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 22159746 - 22159882
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct--aaatcaatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||| || ||||  ||| |||| ||||||||||||   | ||||||  ||| ||||    
T  22159746 cataggagaacttcggaggattcaaaggtcttaaccatatttctctctaatattcttaaaaccaat-ttttattgttttatttacgtttactttataaaa 22159844  T
Q  109 atcaattcaactgcctaggac-acccttgaatttaata 145  Q
    | |||| |||||||||||| | ||| ||||||||||||    
T  22159845 accaatccaactgcctagggcaacctttgaatttaata 22159882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 21332487 - 21332439
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatcac 225  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  21332487 attttattacttcgatacatttttagtacacttgctaaaagtctatcac 21332439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 33575091 - 33575212
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct--aaatcaatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    ||||||||| ||||||||||||  |||| ||||||||||||||||||  || ||||  ||| ||||  |||||||||||||||  |||||||||||  ||    
T  33575091 cataggagagcttcggaggattcgaaggacttaaccatacttctctc-aattttctaaaaaccaattctttattgtttttaatcagtttatgttac-taa 33575188  T
Q  109 atcaattcaactgcctaggacacc 132  Q
    ||||| ||||||||||||| ||||    
T  33575189 atcaactcaactgcctagggcacc 33575212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 7271338 - 7271385
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  7271338 attttattacttcgatacatttttagtacacttgctaaaagtctatca 7271385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 4099338 - 4099290
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatcac 225  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  4099338 attttattacttcgatgcatttttagtacacttgctaaaagtctatcac 4099290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 7650185 - 7650070
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct--aaatcaatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    ||||| ||||||||| ||||||  || ||||||||||||||||||||| || ||||  ||| ||| |||||||||||||   | ||||||||||||||||    
T  7650185 catagaagaacttcgtaggattcaaatgtcttaaccatacttctctctaatattcttaaaagcaa-cttttattgttttatttacgtttatgttacaaaa 7650087  T
Q  109 atcaattcaactgcctagg 127  Q
      ||| |||||||||||||    
T  7650086 --caactcaactgcctagg 7650070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 21335506 - 21335459
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  21335506 attttattacttcgatacatttttagtacacttgttaaaagtctatca 21335459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 33552441 - 33552489
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatcac 225  Q
    ||||||||||||||||| |||||| |||||| || ||||||||||||||    
T  33552441 attttattacttcgatacatttttagtacacatgttaaaagtctatcac 33552489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 28787132 - 28787093
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaa 216  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  28787132 attttattacttcgatacatttttagtacacttgctaaaa 28787093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 32838188 - 32838226
Alignment:
Q  178 ttttattacttcgatatatttttcgtacacttgctaaaa 216  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  32838188 ttttattacttcgatacatttttagtacacttgctaaaa 32838226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 36357053 - 36357101
Alignment:
Q  170 cttataaattttattacttcgatatatttttcgtacacttgctaaaagt 218  Q
    ||||||||| |||||||||||||  |||||| ||||||||| |||||||    
T  36357053 cttataaatattattacttcgatgcatttttagtacacttgttaaaagt 36357101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 7e-31; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 23673588 - 23673452
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatc-aatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||||| || ||||||| | || ||||||||||||||||| ||||||| |||||||      
T  23673588 cataggagaacttcggaggattcgaaggtcttaaccatacatctctctaattttctaaaaccaaacttttattgtttttaatccgtttattttacaaatg 23673489  T
Q  110 tcaattcaactgcctaggacacccttgaatttaatac 146  Q
     |||| |||||||||||| || |||||||||||||||    
T  23673488 ccaatccaactgcctagggcaaccttgaatttaatac 23673452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 36326928 - 36327064
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    |||| |||||||||||||||||  |||||||||||||||| ||||||| || |||| ||| ||| ||||||||||||||||| ||||||| ||||||| |    
T  36326928 catatgagaacttcggaggattcaaaggtcttaaccatacatctctctaattttctaaaaccaaacttttattgtttttaatccgtttattttacaaata 36327027  T
Q  110 tcaattcaactgcctaggacacccttgaatttaatac 146  Q
     ||||  |||| |||||| || | |||||||||||||    
T  36327028 ccaatctaacttcctagggcaactttgaatttaatac 36327064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 30720080 - 30720143
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatcac 225  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  30720080 gatacaaacttataaattttattacttcgatatatttttagtacacttgctaaaagtttatcac 30720143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 13710091 - 13710169
Alignment:
Q  29 gatttcaaggtcttaaccatacttctctctgatcttctaaatc-aatcttttattgtttttaattcgtttatgttacaa 106  Q
    ||||| |||||||||||||||||||||||  || ||||||| | |||||||||||||||||||| ||||||||||||||    
T  13710091 gatttgaaggtcttaaccatacttctctcaaattttctaaaaccaatcttttattgtttttaatccgtttatgttacaa 13710169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 40017981 - 40018096
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttc-taaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    |||||||||  |||||||||||  |||||||||||||||||||||||   | ||| |||| || ||| |||||||||||||| ||||||||||||  |||    
T  40017981 cataggagagtttcggaggattcgaaggtcttaaccatacttctctcaatttttcttaaaccagtctcttattgtttttaatccgtttatgttac--aaa 40018078  T
Q  110 tcaattcaactgcctagg 127  Q
    |||| |||||||||||||    
T  40018079 tcaactcaactgcctagg 40018096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 31626551 - 31626673
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaatt-cgtttatgttacaaaa 108  Q
    ||||||||| ||||||||||||  || | ||||||||| |||||||| ||| |||| ||| ||||| |||||| ||||||||| | |||||||||| |||    
T  31626551 cataggagagcttcggaggattcgaatgacttaaccattcttctctcagattttctaaaaccaatcctttattatttttaattccttttatgttac-aaa 31626649  T
Q  109 atcaattcaactgcctaggacacc 132  Q
    ||||| ||||||||||||| ||||    
T  31626650 atcaactcaactgcctagggcacc 31626673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 5666819 - 5666866
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  5666819 attttattacttcgatatatttttaatacacttgctaaaagtctatca 5666866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 16294900 - 16295016
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct--aaatcaatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||||  || ||||  |||  |||||||  |||||||||||  ||||||| ||| |||    
T  16294900 cataggagaacttcggaggattcgaaggacttaaccatacttctctc-aattttctgaaaactaatctttatttgtttttaatcggtttatgatac-aaa 16294997  T
Q  109 atcaattcaactgcctagg 127  Q
    ||||| |||||||||||||    
T  16294998 atcaactcaactgcctagg 16295016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 43724002 - 43724049
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  43724002 attttattacttcgatatatttttagtacacttgctaaaattctatca 43724049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 31427354 - 31427306
Alignment:
Q  176 aattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||    
T  31427354 aattttattacttcgatgcatttttagtacacttgctaaaagtctatca 31427306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 25138740 - 25138701
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaa 216  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  25138740 attttattacttcgatatatttttagtacacttgctaaaa 25138701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 38460629 - 38460582
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  38460629 attttactacttcgatgtatttttagtacacttgctaaaagtctatca 38460582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 45454166 - 45454214
Alignment:
Q  176 aattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||  || ||| |||||||||||||||||||||||    
T  45454166 aattttattacttcgatgcatatttagtacacttgctaaaagtctatca 45454214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 13971714 - 13971667
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||  |||||| ||||||||||||||||| |||||    
T  13971714 attttattacttcgatgcatttttagtacacttgctaaaagtttatca 13971667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 32575930 - 32575887
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttct 54  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||    
T  32575930 cataggagagcttcggaggattcgaaggtcttaaccatacttct 32575887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 36808256 - 36808208
Alignment:
Q  176 aattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||||| |||   |||||||||||||| |||||||    
T  36808256 aattttattacttcgatatagtttaaatacacttgctaaaaatctatca 36808208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 45457454 - 45457502
Alignment:
Q  176 aattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||  || ||| ||||||||||||||| |||||||    
T  45457454 aattttattacttcgatgcatatttagtacacttgctaaaaatctatca 45457502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 26062937 - 26062799
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctg--atcttctaaatc-aatcttttattgtttttaattcgtttatgttacaaa 107  Q
    ||||||||||||||||||||||  |||||||||||||||| |||||||   || ||||||| | || ||||||||||||||||| ||||||| |||||||    
T  26062937 cataggagaacttcggaggattcaaaggtcttaaccatacatctctctctaattttctaaaaccaaacttttattgtttttaatccgtttattttacaaa 26062838  T
Q  108 aatcaattcaactgcctaggacacccttgaatttaatac 146  Q
     | |||| ||||| |||||| || |||||||||||||||    
T  26062837 taccaatccaactacctagggcaaccttgaatttaatac 26062799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 7394684 - 7394622
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  7394684 gatacgaacttataaattttattacttcgatatacttttagtacacttgctaaaagtttatca 7394622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 24605061 - 24604999
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  24605061 gatacgaacttatagattttattacttcgatatatttttagtacacttgctaaaagtcaatca 24604999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 2541886 - 2542021
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaat--caatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    |||| ||||||||| |||||||  ||||||||||||||||  |||| | || ||| |||   | || |||||||||||||||| |||||||||||||| |    
T  2541886 cataagagaacttcagaggattcgaaggtcttaaccatac--ctctttaattttcaaaaaacctatattttattgtttttaatccgtttatgttacaaga 2541983  T
Q  109 atcaattcaactgcctaggacacccttgaatttaatac 146  Q
    || || ||||||||||||| |||| |||||||||||||    
T  2541984 ataaactcaactgcctagggcaccattgaatttaatac 2542021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 26060801 - 26060860
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||   |||||||||||||||| |||||| |||||||||||||||||||||||    
T  26060801 gatacgaacttat---ttttattacttcgatacatttttagtacacttgctaaaagtctatca 26060860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 19859326 - 19859266
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||||||||||||||  |||| |||| ||||||||| |||||||||||||    
T  19859326 gatacgaacttataaattttattacttc--tatagttttagtacacttgttaaaagtctatca 19859266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 40795321 - 40795372
Alignment:
Q  176 aattttattacttcgatatatttttcgtacacttgctaaaagtctatcactc 227  Q
    |||||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  40795321 aattttattacttcgatacatttttagtacacttgctaaaagtttatcactc 40795372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 647447 - 647349
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    |||||||||||||| |||||||  ||| |||||||||||||||||||| || |||| ||| | | |||||||||||||   | ||||||||||||||||    
T  647447 cataggagaacttcagaggattcgaagatcttaaccatacttctctctaatattctgaaaaccaacttttattgttttatttacgtttatgttacaaaa 647349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 650719 - 650621
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct-aaatcaatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    |||||||||||||| |||||||  |||||||||||||||||||||||| || || | ||| | | |||||||||||||   | ||||||||||||||||    
T  650719 cataggagaacttcagaggattcgaaggtcttaaccatacttctctctaatattatgaaaaccaacttttattgttttatttacgtttatgttacaaaa 650621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 2436977 - 2437031
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaa 216  Q
    |||| |||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  2436977 gatatgaacttataaattttattacttcgatatatttttagtacatttactaaaa 2437031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 11649384 - 11649311
Alignment:
Q  75 cttttattgtttttaattcgtttatgttacaaaaatcaattcaactgcctagg--acacccttgaatttaatac 146  Q
    ||||||||||||||| ||||||||| |||||||| |||| |||||||||||||  ||||| |||||||| ||||    
T  11649384 cttttattgtttttatttcgtttatattacaaaagtcaactcaactgcctagggcacaccattgaattttatac 11649311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 26703298 - 26703236
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||| |||||||||||||||||| |||  |||||| ||| |||||||||||||||||||    
T  26703298 gatacgaagttataaattttattactttgatgcatttttagtatacttgctaaaagtctatca 26703236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 3797627 - 3797579
Alignment:
Q  176 aattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||    
T  3797627 aattttattacttcgatgcatttttagtacacttgctaaaagtctatca 3797579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 19821024 - 19821071
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||| |||||| ||||||||||||||||| |||||    
T  19821024 attttattacttcgatacatttttagtacacttgctaaaagtatatca 19821071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 19827731 - 19827778
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  19827731 attttattacttcgagacatttttagtacacttgctaaaagtctatca 19827778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 49270993 - 49271040
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||||||    
T  49270993 attttattacttcaatatatttttagtacacttactaaaagtctatca 49271040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 11649477 - 11649431
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctc 57  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||    
T  11649477 cataggagaacttcggaggattcgaaggtcttaaccatgcttctctc 11649431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 19864218 - 19864159
Alignment:
Q  163 atacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||||||||||||||  ||| |||| |||||||||| |||| |||||||    
T  19864218 atacgaacttataaattttattacttcg--atagttttagtacacttgcaaaaattctatca 19864159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 26060589 - 26060635
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctc 57  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||    
T  26060589 cataggagaacttcggaggattcgaaggtcttaaccatgcttctctc 26060635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 26060677 - 26060750
Alignment:
Q  75 cttttattgtttttaattcgtttatgttacaaaaatcaattcaactgcctagg--acacccttgaatttaatac 146  Q
    ||||||||||||||| ||| ||||| ||||||||||||| ||| |||||||||  ||||| |||||||| ||||    
T  26060677 cttttattgtttttatttcatttatattacaaaaatcaactcacctgcctagggcacaccattgaattttatac 26060750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 53094808 - 53094870
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||| ||||||||||||||  |||| |  |||||||||||||||| |||||    
T  53094808 gatacgaacttataaagtttattacttcgattcatttataatacacttgctaaaagtttatca 53094870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 15404894 - 15404846
Alignment:
Q  176 aattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||  || ||| |||||||||||||||||||||||    
T  15404894 aattttattacttcgatgcatatttagtacacttgctaaaagtctatca 15404846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 15811948 - 15811900
Alignment:
Q  176 aattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||  |||||| |||||||||||||| ||||||||    
T  15811948 aattttattacttcgatgcatttttagtacacttgctaaaggtctatca 15811900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 56195836 - 56195884
Alignment:
Q  176 aattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||  |||||| ||||||||||||||| |||||||    
T  56195836 aattttattacttcgatgcatttttagtacacttgctaaaaatctatca 56195884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 56199163 - 56199211
Alignment:
Q  176 aattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||  |||||| ||||||||||||||| |||||||    
T  56199163 aattttattacttcgatgcatttttagtacacttgctaaaaatctatca 56199211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 12786432 - 12786471
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaa 216  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  12786432 attttattacttcgatacatttttagtacacttgctaaaa 12786471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 44165099 - 44165138
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaa 216  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  44165099 attttattacttcgatacatttttagtacacttgctaaaa 44165138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 48415326 - 48415288
Alignment:
Q  178 ttttattacttcgatatatttttcgtacacttgctaaaa 216  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  48415326 ttttattacttcgatatgtttttagtacacttgctaaaa 48415288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 33927282 - 33927328
Alignment:
Q  176 aattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||||   |||| |||||||||||||||||||||||    
T  33927282 aattttattacttcgatag--ttttagtacacttgctaaaagtctatca 33927328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 11649272 - 11649213
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||   |||||||| ||||||| |||||| |||  ||||||||||||||||||    
T  11649272 gatacgaacttat---ttttattatttcgatacatttttagtattcttgctaaaagtctatca 11649213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 18860082 - 18860127
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||||  |||| ||||||||||||||||| |||||    
T  18860082 attttattacttcgatat--ttttagtacacttgctaaaagtttatca 18860127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 7542 - 7604
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  7542 gatacgaacttataaattttattacttcgatatatttttagtacacttgctaaaagtttatca 7604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 251 - 119
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttc-taaatcaatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    |||||||||| |||||||||||  || ||||||||||||||||||||| || ||| |||| | | |||||||||||||||||| |||||||||  |||||    
T  251 cataggagaaattcggaggattcgaatgtcttaaccatacttctctctaatattcttaaaaccaacttttattgtttttaatttgtttatgtt--aaaaa 154  T
Q  110 tcaattcaactgcctaggac-acccttgaatttaa 143  Q
     ||| ||||||||||||| | ||| ||||||||||    
T  153 ccaactcaactgcctagggcaaccattgaatttaa 119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 50096968 - 50097020
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaa 214  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50096968 gatacgaacttataaattttattacttcgatatatttttagtacacttgctaa 50097020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 9155113 - 9155175
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| |||||    
T  9155113 gatacgaacttataaattttattatttcgatttatttttagtacacttgctaaaagtttatca 9155175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 9158302 - 9158358
Alignment:
Q  169 acttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatcac 225  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  9158302 acttataaattttattacttcgatttatttttagtacacttgctaaaagtttatcac 9158358  T

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Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 50096847 - 50096918
Alignment:
Q  75 cttttattgtttttaattcgtttatgttacaaaaatcaattcaactgcctaggacacccttgaatttaatac 146  Q
    |||||| |||||||| | ||||||||||||||||||||| |||||||| |||| ||| ||||||||||||||    
T  50096847 cttttactgtttttattacgtttatgttacaaaaatcaactcaactgcttagggcactcttgaatttaatac 50096918  T

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Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 22626554 - 22626434
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaat-caatcttttattgtttttaattcgtttatgttacaaaaa 109  Q
    ||||||||| ||| ||||||||  |||| ||||||||||||||||||  || |||||||| ||||  |||||||||||||||  |||||||||||  |||    
T  22626554 cataggagagctttggaggattcgaaggacttaaccatacttctctc-aattttctaaatccaattctttattgtttttaatcagtttatgttac-taaa 22626457  T
Q  110 tcaattcaactgcctaggacacc 132  Q
    |||| ||||||||||||| ||||    
T  22626456 tcaactcaactgcctagggcacc 22626434  T

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Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 39563754 - 39563637
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaatc-aatcttttattgtttttaattc-gtttatgttacaaaa 108  Q
    ||||||||| | ||||||||||  |||| ||||||||| |||||||| ||| ||||||| | ||||||||| | |||||||||  |||||||||||||||    
T  39563754 cataggagagcgtcggaggattcgaaggacttaaccattcttctctcagattttctaaaaccaatcttttactatttttaattttgtttatgttacaaaa 39563655  T
Q  109 atcaattcaactgcctagg 127  Q
     |||| |||||||||||||    
T  39563654 -tcaactcaactgcctagg 39563637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 16244278 - 16244326
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatcac 225  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  16244278 attttattacttcgatgtatttttagtacacttgctaaaagtctatcac 16244326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 13979488 - 13979565
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttc-taaatcaatcttttattgtttt 87  Q
    ||||||||| ||||||||||||  |||||||||||||||||||||||| || ||| |||| | | |||||||||||||    
T  13979488 cataggagagcttcggaggattcaaaggtcttaaccatacttctctctaatattcttaaaaccaacttttattgtttt 13979565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 52309421 - 52309377
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtcta 221  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||    
T  52309421 attttattacttcgatacatttttagtacacttgctaaaagtcta 52309377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 32287127 - 32287067
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||| |||||||||||||||||||||||  ||| |||| ||||||||| |||||||||||||    
T  32287127 gatacaaacttataaattttattacttcg--atagttttagtacacttgttaaaagtctatca 32287067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 18551972 - 18552036
Alignment:
Q  160 ttgatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||| | |||||||||||||| ||   |||||  ||||||||||||||||||||||    
T  18551972 ttgatacgaacttgtgaattttattacttcaattcttttttattacacttgctaaaagtctatca 18552036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 25260985 - 25261033
Alignment:
Q  171 ttataaattttattacttcgatatatttttcgtacacttgctaaaagtc 219  Q
    |||||||||||||||||| |||  |||||| ||||||||||||||||||    
T  25260985 ttataaattttattactttgatgcatttttagtacacttgctaaaagtc 25261033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 19304492 - 19304445
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  19304492 attttattacttcgatgcaattttagtacacttgctaaaagtctatca 19304445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 30219798 - 30219751
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||  |||||| ||| |||||||||||||||||||    
T  30219798 attttattacttcgatgcatttttagtaaacttgctaaaagtctatca 30219751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 41977406 - 41977453
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||| ||||||  |||||||||||||| |||||||    
T  41977406 attttattacttcgatacatttttaatacacttgctaaaaatctatca 41977453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 46731496 - 46731554
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaa 69  Q
    |||| |||||||||||||||||  |||||||||||| ||| ||||||| || |||||||    
T  46731496 catatgagaacttcggaggattcgaaggtcttaaccttacatctctctaattttctaaa 46731554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 4250702 - 4250752
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatcactcga 229  Q
    |||||||||||||||||   |||| ||||||||||||||||||||||| ||||    
T  4250702 attttattacttcgatag--ttttagtacacttgctaaaagtctatcaatcga 4250752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0996 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 1743 - 1681
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatcact 226  Q
    |||||||||||||||||||||||||||||  ||| |||| ||||||||||||||| |||||||||    
T  1743 gatacgaacttataaattttattacttcg--atagttttagtacacttgctaaaattctatcact 1681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1657 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1657
Description:

Target: scaffold1657; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 285 - 225
Alignment:
Q  165 acgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatcac 225  Q
    ||||||||||||||||||||||||||||  ||||||  |||||||||||||| ||||||||    
T  285 acgaacttataaattttattacttcgatgcatttttaatacacttgctaaaattctatcac 225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 9865 - 9981
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttct--aaatcaatcttttattgtttttaattcgtttatgttacaaaa 108  Q
    ||||||||| ||||||||||||  |||| ||||||||||||||||||  || ||||  ||| ||||  |||||||||||||||  |||||||||||  ||    
T  9865 cataggagagcttcggaggattcgaaggacttaaccatacttctctc-aattttctaaaaaccaattatttattgtttttaatcagtttatgttac-taa 9962  T
Q  109 atcaattcaactgcctagg 127  Q
    ||||| |||||||||||||    
T  9963 atcaactcaactgcctagg 9981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 6054 - 5996
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctctgatcttctaaa 69  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||| || |||||||    
T  6054 cataggagaacctcggaggattcgaaggtcttaaccatacttctctctaattttctaaa 5996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 1351 - 1303
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatcac 225  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||||    
T  1351 attttattacttcgatgcatttttagtacacttgctaaaagtctatcac 1303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 2807 - 2854
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||    
T  2807 attttattacttcgatgcatttttagtacacttgctaaaagtctatca 2854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 27431 - 27478
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||    
T  27431 attttattacttcgatgcatttttagtacacttgctaaaagtctatca 27478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 90080 - 90127
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||    
T  90080 attttattacttcgatgcatttttagtacacttgctaaaagtctatca 90127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 384 - 433
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatcact 226  Q
    ||||||||| ||||||  |||||| |||||||||||||||||||||||||    
T  384 attttattatttcgatgcatttttagtacacttgctaaaagtctatcact 433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 14235 - 14291
Alignment:
Q  168 aacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||| |||||||||||||| |||||| ||| |||||||| |||| |||||    
T  14235 aacttataaatcttattacttcgatacatttttagtatacttgctacaagtttatca 14291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 5672 - 5719
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  5672 attttattacttcgatgcagttttagtacacttgctaaaagtctatca 5719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 2847 - 2801
Alignment:
Q  11 cataggagaacttcggaggatttcaaggtcttaaccatacttctctc 57  Q
    ||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  2847 cataggagagcttcggaggattcaaaggtcttaacgatacttctctc 2801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0496 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 10191 - 10134
Alignment:
Q  165 acgaacttataaattttattacttcgatatatttttcgtacacttgctaaaagtctat 222  Q
    ||||| ||||||||||||||||||||||  |||||| || || ||| |||||||||||    
T  10191 acgaatttataaattttattacttcgatgcatttttagtccatttgttaaaagtctat 10134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2073 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 688 - 627
Alignment:
Q  162 gatacgaacttataaattttattacttcgatatatttttcgtacacttgct-aaaagtctatca 224  Q
    ||||||||||| |||||||||| ||||||  ||| |||| ||||||||||| ||||||||||||    
T  688 gatacgaacttgtaaattttatcacttcg--atagttttagtacacttgctaaaaagtctatca 627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 224023 - 224068
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||   |||| |||||||||||||||||||||||    
T  224023 attttattacttcgatag--ttttagtacacttgctaaaagtctatca 224068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 228949 - 228994
Alignment:
Q  177 attttattacttcgatatatttttcgtacacttgctaaaagtctatca 224  Q
    |||||||||||||||||   |||| |||||||||||||||||||||||    
T  228949 attttattacttcgatag--ttttagtacacttgctaaaagtctatca 228994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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