View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11459_high_18 (Length: 229)
Name: NF11459_high_18
Description: NF11459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11459_high_18 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 33301044 - 33300822
Alignment:
| Q |
7 |
agaacttcgtctaagccataattcatacataaccatgtagaatgcatcaaagtcaatgggaggtgaatgccactgaaaatgctccctcaccttcaacaca |
106 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
33301044 |
agaacttcgtctaagccataattcatacataaccatgtagaatgcatcaaagtcaatgggaggtgaatgccactgaaaatgctccctcactttcaacaca |
33300945 |
T |
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| Q |
107 |
ttcttctgtagcatcaaatactcaccagaatttactatacctttcagaatctttttcaataaaggtatatctaaagtagtaacaacaacagaaaagctct |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33300944 |
ttcttctgtagcatcaaatactcaccagaatttactatacctttcagaatctttttcaataaaggtatatctaaagtagtaacaacaacagaaaagctct |
33300845 |
T |
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| Q |
207 |
tccaattcaacacatcttcaaat |
229 |
Q |
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||||||||||||||||| ||||| |
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| T |
33300844 |
tccaattcaacacatctgcaaat |
33300822 |
T |
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