View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11459_low_21 (Length: 202)

Name: NF11459_low_21
Description: NF11459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11459_low_21
NF11459_low_21
[»] chr2 (30 HSPs)
chr2 (12-182)||(22301183-22301354)
chr2 (38-173)||(26752026-26752161)
chr2 (67-182)||(22301817-22301932)
chr2 (67-168)||(26752670-26752771)
chr2 (28-182)||(24120489-24120641)
chr2 (124-182)||(1296369-1296427)
chr2 (124-182)||(11751073-11751132)
chr2 (124-181)||(9276334-9276392)
chr2 (124-182)||(15774192-15774250)
chr2 (125-182)||(20632915-20632972)
chr2 (115-182)||(9540320-9540388)
chr2 (124-182)||(29512360-29512419)
chr2 (124-170)||(24933838-24933884)
chr2 (145-182)||(24755019-24755056)
chr2 (115-172)||(34812851-34812908)
chr2 (118-182)||(9541032-9541096)
chr2 (101-169)||(18174102-18174170)
chr2 (125-169)||(27177915-27177959)
chr2 (125-173)||(33512096-33512144)
chr2 (124-182)||(1297127-1297186)
chr2 (124-182)||(23857028-23857087)
chr2 (124-182)||(29559424-29559483)
chr2 (124-182)||(29719435-29719494)
chr2 (124-182)||(8541741-8541799)
chr2 (99-169)||(18174649-18174719)
chr2 (124-182)||(23343769-23343827)
chr2 (124-169)||(9275589-9275634)
chr2 (124-173)||(22560572-22560621)
chr2 (125-182)||(36237621-36237678)
chr2 (154-182)||(20431719-20431747)
[»] chr7 (41 HSPs)
chr7 (12-173)||(1418206-1418370)
chr7 (12-182)||(38225288-38225460)
chr7 (67-169)||(1417610-1417712)
chr7 (67-169)||(38225923-38226025)
chr7 (28-168)||(24453636-24453775)
chr7 (56-169)||(8375990-8376106)
chr7 (124-182)||(45099127-45099185)
chr7 (124-182)||(7668471-7668529)
chr7 (124-182)||(18977774-18977832)
chr7 (125-182)||(3903345-3903403)
chr7 (124-182)||(21496988-21497046)
chr7 (124-182)||(46428822-46428880)
chr7 (124-179)||(25343244-25343299)
chr7 (124-182)||(27948434-27948493)
chr7 (124-182)||(46428175-46428234)
chr7 (124-182)||(3029203-3029261)
chr7 (125-187)||(24719319-24719381)
chr7 (124-182)||(25342486-25342544)
chr7 (124-182)||(30660582-30660640)
chr7 (125-182)||(37395505-37395563)
chr7 (124-182)||(37949594-37949652)
chr7 (125-182)||(45099899-45099957)
chr7 (124-173)||(25599020-25599069)
chr7 (124-173)||(26636101-26636150)
chr7 (125-182)||(37706417-37706474)
chr7 (125-173)||(23889812-23889860)
chr7 (124-182)||(3772531-3772590)
chr7 (124-182)||(13785598-13785657)
chr7 (124-182)||(16664130-16664189)
chr7 (124-182)||(17638490-17638549)
chr7 (124-182)||(30661460-30661519)
chr7 (124-182)||(37950472-37950531)
chr7 (124-182)||(19067626-19067684)
chr7 (125-182)||(19068401-19068459)
chr7 (125-182)||(36378800-36378858)
chr7 (124-169)||(25343305-25343350)
chr7 (124-173)||(26636865-26636914)
chr7 (124-169)||(40273562-40273607)
chr7 (111-182)||(3688372-3688444)
chr7 (101-169)||(24389598-24389666)
chr7 (138-166)||(24453747-24453775)
[»] chr8 (24 HSPs)
chr8 (12-182)||(27442034-27442204)
chr8 (12-93)||(183318-183399)
chr8 (67-169)||(27441469-27441571)
chr8 (101-182)||(41974629-41974711)
chr8 (67-168)||(183893-183994)
chr8 (124-173)||(26652292-26652341)
chr8 (126-182)||(37732816-37732872)
chr8 (111-182)||(17725645-17725716)
chr8 (124-182)||(9197824-9197882)
chr8 (124-182)||(37064806-37064864)
chr8 (124-173)||(32979828-32979877)
chr8 (124-173)||(39778917-39778966)
chr8 (124-173)||(39779845-39779894)
chr8 (124-182)||(9197084-9197143)
chr8 (125-170)||(8372915-8372960)
chr8 (124-169)||(11686968-11687013)
chr8 (125-173)||(15198295-15198343)
chr8 (124-182)||(3165126-3165185)
chr8 (124-182)||(31642091-31642150)
chr8 (124-182)||(38576306-38576365)
chr8 (115-169)||(3043245-3043299)
chr8 (124-178)||(31602010-31602064)
chr8 (125-169)||(3043970-3044014)
chr8 (125-173)||(8373698-8373746)
[»] chr5 (28 HSPs)
chr5 (12-160)||(1553419-1553567)
chr5 (67-169)||(1554030-1554132)
chr5 (124-182)||(4084869-4084927)
chr5 (124-182)||(29046018-29046076)
chr5 (125-182)||(234690-234747)
chr5 (125-182)||(14478910-14478967)
chr5 (101-182)||(17071775-17071856)
chr5 (102-182)||(19128758-19128839)
chr5 (125-173)||(19360481-19360529)
chr5 (125-182)||(237826-237884)
chr5 (111-169)||(7632097-7632155)
chr5 (125-182)||(19359692-19359750)
chr5 (124-182)||(29087914-29087972)
chr5 (129-166)||(1283520-1283557)
chr5 (129-166)||(10554541-10554578)
chr5 (124-173)||(13306273-13306322)
chr5 (99-182)||(17071212-17071296)
chr5 (141-173)||(31081997-31082029)
chr5 (99-182)||(34600249-34600333)
chr5 (124-182)||(22799764-22799823)
chr5 (124-182)||(28705153-28705212)
chr5 (124-182)||(28705883-28705942)
chr5 (124-170)||(6476795-6476841)
chr5 (124-182)||(33471093-33471151)
chr5 (125-182)||(43510221-43510278)
chr5 (143-182)||(6476057-6476097)
chr5 (101-169)||(34600812-34600880)
chr5 (124-168)||(36038698-36038742)
[»] scaffold0085 (4 HSPs)
scaffold0085 (54-157)||(16581-16684)
scaffold0085 (125-182)||(22076-22133)
scaffold0085 (124-173)||(15021-15070)
scaffold0085 (124-173)||(15080-15129)
[»] chr3 (34 HSPs)
chr3 (28-133)||(982352-982457)
chr3 (69-138)||(35718410-35718479)
chr3 (124-182)||(33277509-33277567)
chr3 (124-173)||(10847290-10847339)
chr3 (124-182)||(20213536-20213594)
chr3 (124-182)||(51827499-51827557)
chr3 (124-173)||(14871152-14871201)
chr3 (115-182)||(13477046-13477114)
chr3 (115-182)||(37988214-37988282)
chr3 (124-182)||(20212969-20213028)
chr3 (70-141)||(35719158-35719228)
chr3 (124-182)||(48648192-48648251)
chr3 (111-173)||(45081395-45081457)
chr3 (124-182)||(48765075-48765133)
chr3 (86-182)||(33276881-33276978)
chr3 (124-173)||(44029774-44029823)
chr3 (124-180)||(265103-265159)
chr3 (84-182)||(8949924-8950024)
chr3 (86-182)||(10847876-10847972)
chr3 (124-172)||(37520566-37520614)
chr3 (111-179)||(44699812-44699880)
chr3 (111-179)||(46150721-46150789)
chr3 (124-182)||(21727534-21727593)
chr3 (124-182)||(27082765-27082824)
chr3 (124-182)||(48764466-48764525)
chr3 (124-166)||(981673-981715)
chr3 (124-182)||(17603158-17603216)
chr3 (124-170)||(48507037-48507083)
chr3 (125-182)||(40872814-40872871)
chr3 (124-173)||(52266458-52266507)
chr3 (93-182)||(52281756-52281845)
chr3 (140-173)||(52605504-52605537)
chr3 (124-169)||(54458670-54458715)
chr3 (138-166)||(55373727-55373755)
[»] chr1 (32 HSPs)
chr1 (124-182)||(37852512-37852570)
chr1 (124-182)||(28181522-28181580)
chr1 (124-182)||(12760764-12760823)
chr1 (143-182)||(36389764-36389803)
chr1 (124-182)||(36390372-36390431)
chr1 (124-182)||(12761501-12761559)
chr1 (124-182)||(25469091-25469149)
chr1 (115-173)||(25671168-25671226)
chr1 (124-173)||(30663981-30664030)
chr1 (124-182)||(7406233-7406292)
chr1 (124-182)||(7559204-7559263)
chr1 (124-182)||(49681678-49681736)
chr1 (124-169)||(4439211-4439256)
chr1 (124-169)||(13262835-13262880)
chr1 (125-182)||(17171920-17171977)
chr1 (125-182)||(36689071-36689128)
chr1 (125-182)||(36705171-36705228)
chr1 (86-182)||(37853102-37853199)
chr1 (143-187)||(26118657-26118701)
chr1 (124-182)||(19172580-19172639)
chr1 (124-182)||(49680799-49680858)
chr1 (143-173)||(9778996-9779026)
chr1 (125-182)||(27256718-27256776)
chr1 (124-182)||(30932800-30932858)
chr1 (124-170)||(34309235-34309281)
chr1 (144-182)||(46909387-46909425)
chr1 (124-169)||(4433852-4433897)
chr1 (124-173)||(13263521-13263570)
chr1 (124-173)||(30663356-30663405)
chr1 (125-170)||(34308474-34308519)
chr1 (124-173)||(50271788-50271837)
chr1 (154-182)||(43251925-43251953)
[»] chr6 (16 HSPs)
chr6 (125-182)||(20833972-20834029)
chr6 (124-173)||(8489284-8489333)
chr6 (124-182)||(26529517-26529575)
chr6 (124-182)||(33436278-33436336)
chr6 (124-180)||(19311831-19311887)
chr6 (124-182)||(10171264-10171323)
chr6 (124-182)||(19323771-19323830)
chr6 (125-182)||(2512426-2512484)
chr6 (124-182)||(10171970-10172028)
chr6 (124-182)||(26528811-26528870)
chr6 (124-182)||(33435328-33435387)
chr6 (138-168)||(9441240-9441270)
chr6 (101-182)||(21133208-21133290)
chr6 (101-169)||(3623728-3623796)
chr6 (154-182)||(7449791-7449819)
chr6 (138-166)||(19311847-19311875)
[»] chr4 (31 HSPs)
chr4 (115-182)||(31329713-31329781)
chr4 (124-182)||(44469482-44469540)
chr4 (124-173)||(44792641-44792690)
chr4 (124-182)||(26147037-26147096)
chr4 (99-182)||(47688459-47688542)
chr4 (124-182)||(599306-599364)
chr4 (124-182)||(11939446-11939504)
chr4 (124-182)||(30573714-30573772)
chr4 (124-170)||(40347556-40347602)
chr4 (124-182)||(44791714-44791772)
chr4 (101-182)||(47687898-47687980)
chr4 (124-173)||(598524-598573)
chr4 (124-173)||(8247695-8247744)
chr4 (129-166)||(16903664-16903701)
chr4 (124-173)||(24374788-24374837)
chr4 (126-182)||(40495084-40495141)
chr4 (125-182)||(53772797-53772854)
chr4 (93-173)||(9365168-9365248)
chr4 (124-182)||(2446166-2446225)
chr4 (124-182)||(7841783-7841839)
chr4 (124-182)||(8248525-8248584)
chr4 (124-182)||(8266190-8266249)
chr4 (124-182)||(20774185-20774244)
chr4 (84-169)||(142488-142574)
chr4 (144-182)||(1465310-1465348)
chr4 (124-170)||(56262480-56262526)
chr4 (124-170)||(56263077-56263123)
chr4 (125-169)||(2444375-2444419)
chr4 (124-168)||(8265365-8265409)
chr4 (138-166)||(16903689-16903717)
chr4 (154-182)||(50450251-50450279)
[»] scaffold0002 (1 HSPs)
scaffold0002 (124-182)||(428906-428964)
[»] scaffold0176 (1 HSPs)
scaffold0176 (124-182)||(26580-26639)
[»] scaffold1207 (1 HSPs)
scaffold1207 (124-182)||(1576-1634)
[»] scaffold0418 (1 HSPs)
scaffold0418 (126-182)||(6891-6948)
[»] scaffold0086 (1 HSPs)
scaffold0086 (124-182)||(8296-8355)
[»] scaffold0504 (1 HSPs)
scaffold0504 (125-182)||(5385-5443)
[»] scaffold0164 (1 HSPs)
scaffold0164 (124-182)||(11660-11718)
[»] scaffold0096 (1 HSPs)
scaffold0096 (125-182)||(39884-39942)


Alignment Details
Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 12 - 182
Target Start/End: Complemental strand, 22301354 - 22301183
Alignment:
Q  12 gcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggacccttggattaaacata 111  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22301354 gcaaaggagaaggtgtgagagtgcagattaggggggatcaagtggagaacggttcacgtgagttaatttcacagtaattagaacccttggattaaacata 22301255  T
Q  112 ataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  22301254 ataaatggctatgatttggtgttaacggattcgttgacacctggtgtcaacggatcctgactcatatatata 22301183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 38 - 173
Target Start/End: Complemental strand, 26752161 - 26752026
Alignment:
Q  38 attaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaac 137  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26752161 attaggggggatcaagtggagaacggttcacgtgagttaatttcacaataattaggacccttggattaaacataataaatggctacgatttagtgttaac 26752062  T
Q  138 ggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||||||||||||| ||||||||||||||||||||    
T  26752061 ggattcgttgacacctggtgtcaacggatcctgact 26752026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 67 - 182
Target Start/End: Original strand, 22301817 - 22301932
Alignment:
Q  67 acgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggat 166  Q
    |||||||||||||| ||| ||||  ||||||||||||||||  || ||||||| || |||||||||| |||| ||||||||||||| |||||||||||||    
T  22301817 acgtgagttaattttacaataatcgggacccttggattaaatgtattaaatggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggat 22301916  T
Q  167 cctgactatatatata 182  Q
    |||  |||||||||||    
T  22301917 cctatctatatatata 22301932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 67 - 168
Target Start/End: Original strand, 26752670 - 26752771
Alignment:
Q  67 acgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggat 166  Q
    |||||||||||||| |||||||| |||||||||||||||||  || ||||||| || |||||| ||| |||| ||||||||||||| |||||||||||||    
T  26752670 acgtgagttaattttacagtaatcaggacccttggattaaatgtattaaatggttaagatttgatgtcaacgaattcgttgacacctggtgtcaacggat 26752769  T
Q  167 cc 168  Q
    ||    
T  26752770 cc 26752771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 182
Target Start/End: Complemental strand, 24120641 - 24120489
Alignment:
Q  28 gagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatt 127  Q
    ||||||||||||||||||  || |  ||||||| |||||| |||||||||||| ||| || |||||||| ||| ||||||  || |||||||||| ||||    
T  24120641 gagtgtgcaaattagggg--atcagatggagaaaggttcatgtgagttaattttacaatagttaggaccattgaattaaatgtattaaatggctaagatt 24120544  T
Q  128 tggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    | |||| || ||||| |||||||||  |||||||| ||||||   ||||||||||    
T  24120543 tagtgtcaatggattggttgacacctagtgtcaacagatcctatatatatatata 24120489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 1296427 - 1296369
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  1296427 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactctatatata 1296369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 11751073 - 11751132
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| ||| |||||||||    
T  11751073 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctaactcatatatata 11751132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 9276334 - 9276392
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatat 181  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  9276334 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactcatatatat 9276392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 15774250 - 15774192
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||  |||||||||||    
T  15774250 gatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcctatctatatatata 15774192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 20632915 - 20632972
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||| ||| || ||||||||| ||||| |||||||||||||||||||||||||||||    
T  20632915 atttgatgtcaatggattcgttaacacctggtgtcaacggatcctgactatatatata 20632972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 9540388 - 9540320
Alignment:
Q  115 aatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||| || |||||||||| |||| ||||||||||||| ||||||||||||||||| || |||||||||    
T  9540388 aatggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgtctcatatatata 9540320  T

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Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 29512419 - 29512360
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||  |||||||||||||||||||||||||||| ||||| |||||||||    
T  29512419 gatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcatgactcatatatata 29512360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 24933884 - 24933838
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 170  Q
    |||||||||| || | |||||||||||||||||||||||||||||||    
T  24933884 gatttggtgtcaatgaattcgttgacaccaggtgtcaacggatcctg 24933838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 24755019 - 24755056
Alignment:
Q  145 ttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||| |||||||||||||||||||||||||||||    
T  24755019 ttgacacctggtgtcaacggatcctgactatatatata 24755056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 34812851 - 34812908
Alignment:
Q  115 aatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgac 172  Q
    ||||| || ||||||||||||||| || |||||||| | |||||||||||||||||||    
T  34812851 aatggttaggatttggtgttaacgaatccgttgacaactggtgtcaacggatcctgac 34812908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 9541032 - 9541096
Alignment:
Q  118 ggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||| |||||||||| |||| ||||||||||| |  ||| |||||||||||| |||||||||||    
T  9541032 ggctaagatttggtgtcaacgaattcgttgacatctcgtgccaacggatcctgtctatatatata 9541096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 18174170 - 18174102
Alignment:
Q  101 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    ||||||| | |||||| || | ||||||||||| |||| ||||||| ||||| ||||||||||||||||    
T  18174170 gattaaataaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatcct 18174102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 27177959 - 27177915
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||    
T  27177959 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 27177915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 33512144 - 33512096
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||| |||| |||| |||||||||||| |||||||||||||||||||||    
T  33512144 atttagtgtcaacgaattcgttgacactaggtgtcaacggatcctgact 33512096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 1297127 - 1297186
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| |||||||||    
T  1297127 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatata 1297186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 23857028 - 23857087
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||  || ||||||||||||||||||||||||||| ||| |||||||||    
T  23857028 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatcctaactcatatatata 23857087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 29559424 - 29559483
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||| ||| |||||||||    
T  29559424 gatttggtgtcaacgaattcgttgacacctggtgtcaacagatcctaactcatatatata 29559483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 29719494 - 29719435
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||| || |||||||||    
T  29719494 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcatatatata 29719435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 8541799 - 8541741
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||| |||| |||| ||||||||| ||| | |||||||||||||||||| ||||||||    
T  8541799 gattttgtgtcaacgaattcgttgagacctgatgtcaacggatcctgactctatatata 8541741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 18174649 - 18174719
Alignment:
Q  99 tggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    ||||||||| | |||||| || |  |||||||||| |||| ||||||||||||| | ||||||||||||||    
T  18174649 tggattaaataaaataaacggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcct 18174719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 23343827 - 23343769
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||| ||| |||| || |||||||| | ||||||||| |||||||||||||||||||    
T  23343827 gatttgatgtcaacgaatccgttgacatctggtgtcaacagatcctgactatatatata 23343769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 9275634 - 9275589
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||    
T  9275634 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 9275589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 22560572 - 22560621
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||| |||| || |||||||||| | ||||||||||||||||||    
T  22560572 gatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgact 22560621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 36237678 - 36237621
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||| || | || |||||||||| |||||||||||||||||||| | ||||||    
T  36237678 atttggtgtcaatgaatccgttgacacctggtgtcaacggatcctgactctctatata 36237621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 182
Target Start/End: Complemental strand, 20431747 - 20431719
Alignment:
Q  154 ggtgtcaacggatcctgactatatatata 182  Q
    |||||||||||||||||||||||||||||    
T  20431747 ggtgtcaacggatcctgactatatatata 20431719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 1e-70; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 1418206 - 1418370
Alignment:
Q  12 gcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggacccttggattaaacata 111  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  1418206 gcaaaggagaaggtgtgagtgtgcagattaggggggatcaagtggagaacggttcacgtgagttaatttcacaataattaggacgcttggattaaacata 1418305  T
Q  112 ataaatggctacgatttggtgttaacggattcgttgacacca---ggtgtcaacggatcctgact 173  Q
    ||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  1418306 ataaatggctacgatttggtgttaacggattcgttgacaccacctggtgtcaacggatcctgact 1418370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 12 - 182
Target Start/End: Complemental strand, 38225460 - 38225288
Alignment:
Q  12 gcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagtt-aatttcacagtaattaggacccttggattaaacat 110  Q
    ||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  38225460 gcaaaggagaaggtgtgagagtgcagattaggggggatcaagtggagaacggttcacgtgagtttaatttcacagtaattagaacccttggattaaacat 38225361  T
Q  111 aataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||    
T  38225360 aataaatggctatgatttggtgttaacggattcgttgacacctggtgtcaacggatcatgactcatatatata 38225288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 1417712 - 1417610
Alignment:
Q  67 acgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggat 166  Q
    |||||||||||||| ||| |||| |||||||||||||||||  || ||||||| || |||||||||| |||| ||||||||||||| |||||||||||||    
T  1417712 acgtgagttaattttacattaatcaggacccttggattaaatgtattaaatggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggat 1417613  T
Q  167 cct 169  Q
    |||    
T  1417612 cct 1417610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 38225923 - 38226025
Alignment:
Q  67 acgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggat 166  Q
    |||||||||||||| ||| ||||  ||||||||||||||||  || ||||||| || |||||||||| |||| ||||||||||||| |||||||||||||    
T  38225923 acgtgagttaattttacaataatctggacccttggattaaatgtattaaatggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggat 38226022  T
Q  167 cct 169  Q
    |||    
T  38226023 cct 38226025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 28 - 168
Target Start/End: Original strand, 24453636 - 24453775
Alignment:
Q  28 gagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatt 127  Q
    ||||||||| |||||| ||||| || |||||||  |||||||||||||||||||| | |||||| |||||||||||||||  || |||||  ||| ||||    
T  24453636 gagtgtgcagattaggagggatcaaatggagaaaagttcacgtgagttaatttca-aataattatgacccttggattaaatgtattaaataactaagatt 24453734  T
Q  128 tggtgttaacggattcgttgacaccaggtgtcaacggatcc 168  Q
    |||||| |||  || |||||||||| |||||||||| ||||    
T  24453735 tggtgtcaacaaatccgttgacacctggtgtcaacgaatcc 24453775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 8376106 - 8375990
Alignment:
Q  56 gagaacggttcacgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgt---taacggattcgttgacacc 152  Q
    ||||| |||||| |||||||||||| ||| ||||||||||||||||||||||  || |||||||||| ||||| ||||   ||| |||||||||||||||    
T  8376106 gagaaaggttcatgtgagttaattttacaataattaggacccttggattaaatgtattaaatggctaagatttagtgtcaataatggattcgttgacacc 8376007  T
Q  153 aggtgtcaacggatcct 169  Q
     |||| ||| |||||||    
T  8376006 tggtgccaatggatcct 8375990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 45099185 - 45099127
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||    
T  45099185 gatttggtgttaacgaattcgttgacacctgatgtcaacggatcctgactatatatata 45099127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 7668529 - 7668471
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||||||||||||    
T  7668529 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactatatatata 7668471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 18977774 - 18977832
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||||||||| || |||||||||| |||||||| ||||||||||||||||||||    
T  18977774 gatttggtgttaacgaatccgttgacacctggtgtcaatggatcctgactatatatata 18977832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 3903345 - 3903403
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgac-tatatatata 182  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  3903345 atttggtgtcaacggatccgttgacacctggtgtcaacggatcctgacttatatatata 3903403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 21496988 - 21497046
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| ||||||||||||| | |||||||||||||||| ||||||||||    
T  21496988 gatttggtgtcaacgaattcgttgacacctgttgtcaacggatcctgattatatatata 21497046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 46428822 - 46428880
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||| ||| |||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  46428822 gatttgatgtcaacgaattcgttgacacctggtgtcaacggatcctgactctatatata 46428880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 25343244 - 25343299
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatat 179  Q
    |||||||||| |||| |||| |||||||| |||||||||||||||||||| |||||    
T  25343244 gatttggtgtcaacgaattcattgacacctggtgtcaacggatcctgactctatat 25343299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 27948493 - 27948434
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||| ||| |||||||||    
T  27948493 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctaactcatatatata 27948434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 46428234 - 46428175
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||| |||||||||    
T  46428234 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatata 46428175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 3029203 - 3029261
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||   ||||||||||    
T  3029203 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatatatatatata 3029261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 24719381 - 24719319
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatatacatga 187  Q
    ||||||||| |||| || |||||||| | |||||||||||||||| |||||||||||| ||||    
T  24719381 atttggtgtcaacgaatccgttgacatctggtgtcaacggatcctaactatatatatatatga 24719319  T

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Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 25342544 - 25342486
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| ||||||||    
T  25342544 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatata 25342486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 30660640 - 30660582
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| ||||||||    
T  30660640 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatata 30660582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 37395505 - 37395563
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||||||| || |||||||||| |||||||||||||||| ||| |||||||||    
T  37395505 atttggtgttaacgaatccgttgacacctggtgtcaacggatcctaactcatatatata 37395563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 37949652 - 37949594
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||| || ||||||||    
T  37949652 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctctatatata 37949594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 45099899 - 45099957
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||| |||| || |||||||||| |||||||||||||||||||| |||||||||    
T  45099899 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatata 45099957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 25599069 - 25599020
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||||||    
T  25599069 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgact 25599020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 26636150 - 26636101
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||||||    
T  26636150 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgact 26636101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 37706474 - 37706417
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||||||| || |||||| ||| |||||||| ||||||||||| ||||||||    
T  37706474 atttggtgttaacgaatccgttgatacctggtgtcaatggatcctgactctatatata 37706417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 23889812 - 23889860
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||||||| |||| |||||||||||||||||| ||||||||| |||||    
T  23889812 atttggtgtcaacgaattcgttgacaccaggtgccaacggatcttgact 23889860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 3772531 - 3772590
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| |||||||||    
T  3772531 gatttggtgtcaacgaatacgttgacacctggtgtcaacggatcctaactcatatatata 3772590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 13785598 - 13785657
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||| || |||||||||    
T  13785598 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcatatatata 13785657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 16664130 - 16664189
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||| |||| ||||||| |||||||||| |||||||||||||||| ||| |||||||||    
T  16664130 gatttagtgtcaacggatccgttgacacctggtgtcaacggatcctaactcatatatata 16664189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 17638490 - 17638549
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||| |||| ||||||| |||||||||| |||||||||||||||| ||| |||||||||    
T  17638490 gatttagtgtcaacggatccgttgacacctggtgtcaacggatcctaactcatatatata 17638549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 30661460 - 30661519
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||| || |||||||||    
T  30661460 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcatatatata 30661519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 37950472 - 37950531
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| |||||||||    
T  37950472 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatata 37950531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 19067684 - 19067626
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| || |||||||||  |||||||||||||||||  ||||||||||    
T  19067684 gatttggtgtcaacgaatccgttgacacgtggtgtcaacggatcctgtatatatatata 19067626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 19068401 - 19068459
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||| |||| || |||||||||| ||||||||||||||||| || |||||||||    
T  19068401 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcctgtctcatatatata 19068459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 36378858 - 36378800
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||| |||| || ||| |||||||||||||||| |||||||||| |||||||||    
T  36378858 atttggtgtcaacgaatccgtcgacaccaggtgtcaacagatcctgactcatatatata 36378800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 25343350 - 25343305
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||    
T  25343350 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 25343305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 26636865 - 26636914
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||| |||| || ||||||||||  |||||||||||||||||||    
T  26636865 gatttggtgtcaacgaatccgttgacaccttgtgtcaacggatcctgact 26636914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 40273607 - 40273562
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    |||||||||| |||| |||| |||||||| ||||||||||||||||    
T  40273607 gatttggtgtcaacgaattcattgacacctggtgtcaacggatcct 40273562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 3688444 - 3688372
Alignment:
Q  111 aataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||| || |||||||||| |||| || |||||| | | ||||||||||||||||| || |||||||||    
T  3688444 aataaatggataagatttggtgtcaacgaatccgttgatatctggtgtcaacggatcctgtctcatatatata 3688372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 24389598 - 24389666
Alignment:
Q  101 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    ||||||| | ||||||||| |  |||||||||| || | || |||||||||| ||||||||||||||||    
T  24389598 gattaaataaaataaatggttgagatttggtgtcaatgaatccgttgacacctggtgtcaacggatcct 24389666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 24453775 - 24453747
Alignment:
Q  138 ggattcgttgacaccaggtgtcaacggat 166  Q
    |||||||||||||||||||||||||||||    
T  24453775 ggattcgttgacaccaggtgtcaacggat 24453747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 2e-66; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 12 - 182
Target Start/End: Original strand, 27442034 - 27442204
Alignment:
Q  12 gcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggacccttggattaaacata 111  Q
    ||||||||||||||||||| ||| | |||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27442034 gcaaaggagaaggtgtgagagtg-agattaggggggatcaagtggagaatggttcacgtgagttaatttcacagtaattagaacccttggattaaacata 27442132  T
Q  112 ataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  27442133 ataaatggctatgatttggtgttaacggattcgttgacacctggtgtcaacggatcctgactcatatatata 27442204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 183399 - 183318
Alignment:
Q  12 gcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattagg 93  Q
    |||||||||||||| |||||||||| ||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  183399 gcaaaggagaaggtttgagtgtgcagattagcggggatcaagtggagaacggttcatgtgagttaatttcacaataattagg 183318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 27441571 - 27441469
Alignment:
Q  67 acgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggat 166  Q
    |||||||||||||| ||| ||||  | ||||||||||||||  || ||||||| || |||||| ||| |||| ||||||||||||| |||||||||||||    
T  27441571 acgtgagttaattttacaataatcggaacccttggattaaatgtattaaatggttaagatttgatgtcaacgaattcgttgacacctggtgtcaacggat 27441472  T
Q  167 cct 169  Q
    |||    
T  27441471 cct 27441469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 182
Target Start/End: Complemental strand, 41974711 - 41974629
Alignment:
Q  101 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||| ||||| |||||||  |||||||||| |||| || |||||||||| |||||||||||||||||||| |||||||||    
T  41974711 gattaaatataatgaatggctgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatata 41974629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 168
Target Start/End: Original strand, 183893 - 183994
Alignment:
Q  67 acgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggat 166  Q
    |||||||||||||| ||| |||| ||||| |||||||||||  || ||||| | || ||||||||||||||| ||||||||||| | ||| |||||| ||    
T  183893 acgtgagttaattttacaataatcaggacacttggattaaatgtattaaatagttaagatttggtgttaacgaattcgttgacatctggtatcaacgaat 183992  T
Q  167 cc 168  Q
    ||    
T  183993 cc 183994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 26652341 - 26652292
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  26652341 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctgact 26652292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 37732872 - 37732816
Alignment:
Q  126 tttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||    
T  37732872 tttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctgactctatatata 37732816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 17725645 - 17725716
Alignment:
Q  111 aataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||| || |||||||||| |||| ||||||||||||| | ||||||||||||||| || ||||||||    
T  17725645 aataaatggataggatttggtgtcaacgaattcgttgacacctgctgtcaacggatcctgtctctatatata 17725716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 9197824 - 9197882
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| ||||||||||||  |||||||||||||||||||| ||||||||    
T  9197824 gatttggtgtcaacgaattcgttgacacttggtgtcaacggatcctgactctatatata 9197882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 37064864 - 37064806
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| || | ||||||||||||| ||||||||| |||||||||||||||||||    
T  37064864 gatttggtgtcaatgaattcgttgacacctggtgtcaacagatcctgactatatatata 37064806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 32979828 - 32979877
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  32979828 gatttggtgttaacaaattcgttgacacctggtgtcaacggatcctgact 32979877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 39778966 - 39778917
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  39778966 gatttggtgttaacgaattcgttgacacctggtgtcaatggatcctgact 39778917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 39779845 - 39779894
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  39779845 gatttggtgttaacgaattcgttgacacctggtgtcaatggatcctgact 39779894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 9197143 - 9197084
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| ||||||||||||| ||||||||||||| |||||| |||||||||    
T  9197143 gatttggtgtcaacgaattcgttgacacctggtgtcaacggattctgactcatatatata 9197084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 8372960 - 8372915
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 170  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||    
T  8372960 atttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctg 8372915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 11686968 - 11687013
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||    
T  11686968 gatttagtgtcaacgaattcgttgacaccaggtgtcaacggatcct 11687013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 15198295 - 15198343
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||||||| |||  |||||||||||||||||||||| |||||||||||    
T  15198295 atttggtgtcaacaaattcgttgacaccaggtgtcaaaggatcctgact 15198343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 3165126 - 3165185
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| | |||||||||||||||||| |||||||||    
T  3165126 gatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgactcatatatata 3165185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 31642091 - 31642150
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| ||||||||||| | |||||||| ||||||||||| |||||||||    
T  31642091 gatttggtgtcaacgaattcgttgacatctggtgtcaatggatcctgactcatatatata 31642150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 38576306 - 38576365
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| |||||||||    
T  38576306 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatata 38576365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 3043299 - 3043245
Alignment:
Q  115 aatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    ||||| || |||||||||| || | ||| ||||||||||||||||||||||||||    
T  3043299 aatggttaggatttggtgtcaatgaatttgttgacaccaggtgtcaacggatcct 3043245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 31602064 - 31602010
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatata 178  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||| ||| ||||    
T  31602064 gatttggtgtcaacgaattcgttgacacctggtgtcaaccgatcctaactctata 31602010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 3043970 - 3044014
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    ||||||||| |||| ||||||||||||| |||||| |||||||||    
T  3043970 atttggtgtcaacgaattcgttgacacctggtgtcgacggatcct 3044014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 8373698 - 8373746
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||||||| |||| || |||||||||  ||||||||||||||||||||    
T  8373698 atttggtgtcaacgaatccgttgacacttggtgtcaacggatcctgact 8373746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 1e-64; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 1553567 - 1553419
Alignment:
Q  12 gcaaaggagaaggtgtgagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggacccttggattaaacata 111  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1553567 gcaaaggagaaggtgtgagagtgcagattaggggggatcaagtggagaacggttcacgtgagttaatttcacagtaattagaacccttggattaaacata 1553468  T
Q  112 ataaatggctacgatttggtgttaacggattcgttgacaccaggtgtca 160  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  1553467 ataaatggctatgatttggtgttaacggattcgttgacacctggtgtca 1553419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 1554030 - 1554132
Alignment:
Q  67 acgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggat 166  Q
    |||||||||||||| ||| ||||  ||||||||||||||||  || ||||||| || |||||||||| |||| ||||||||||||| |||||||||||||    
T  1554030 acgtgagttaattttacaataatcgggacccttggattaaatgtattaaatggttaagatttggtgtcaacgaattcgttgacacctggtgtcaacggat 1554129  T
Q  167 cct 169  Q
    |||    
T  1554130 cct 1554132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 4084927 - 4084869
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||    
T  4084927 gatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcctgactctatatata 4084869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 29046076 - 29046018
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||| ||||||||    
T  29046076 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctatatata 29046018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 234747 - 234690
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||| |||| || |||||||||| |||||||||||||||||||| ||||||||    
T  234747 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctatatata 234690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 14478967 - 14478910
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||| |||| || |||||||||| | |||||||||||||||||||||||||||    
T  14478967 atttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgactatatatata 14478910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 17071775 - 17071856
Alignment:
Q  101 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||| | |||||| || | ||||||||||| |||| ||||||| ||||| |||||||||||||||| ||| ||||||||    
T  17071775 gattaaataaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctaactctatatata 17071856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 19128839 - 19128758
Alignment:
Q  102 attaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||| | |||||| || || |||||||||| |||| || |||||||||| |||||||||||||||||||| |||||||||    
T  19128839 attaaataaaataaacggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatata 19128758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 19360481 - 19360529
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  19360481 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgact 19360529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 237826 - 237884
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||| |||| || |||||||||| |||||||||||||||||||| |||||||||    
T  237826 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatata 237884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 7632155 - 7632097
Alignment:
Q  111 aataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    ||||||||| || |||||||||| |||| || |||||||||| ||||||||||||||||    
T  7632155 aataaatggataagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 7632097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 19359750 - 19359692
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||| |||| || |||||||||| |||||||||||||||||||| |||||||||    
T  19359750 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatata 19359692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 29087972 - 29087914
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| || | || |||||||||| |||||||||||||||||||| ||||||||    
T  29087972 gatttggtgtcaatgaatccgttgacacctggtgtcaacggatcctgactctatatata 29087914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 1283557 - 1283520
Alignment:
Q  129 ggtgttaacggattcgttgacaccaggtgtcaacggat 166  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  1283557 ggtgtcaacggattcgttgacaccaggtgtcaacggat 1283520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 10554541 - 10554578
Alignment:
Q  129 ggtgttaacggattcgttgacaccaggtgtcaacggat 166  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  10554541 ggtgtcaacggattcgttgacaccaggtgtcaacggat 10554578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 13306273 - 13306322
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||| ||| |||| ||||||||||| ||||||||||||||||||||||    
T  13306273 gatttgatgtcaacgaattcgttgacatcaggtgtcaacggatcctgact 13306322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 17071296 - 17071212
Alignment:
Q  99 tggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||| | |||||| || |  |||||||||| |||| ||||||||||||| | |||||||||||||| ||| |||||||||    
T  17071296 tggattaaataaaataaacggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcctaactcatatatata 17071212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 173
Target Start/End: Complemental strand, 31082029 - 31081997
Alignment:
Q  141 ttcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||||||||||||||||||||||||||    
T  31082029 ttcgttgacaccaggtgtcaacggatcctgact 31081997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 34600333 - 34600249
Alignment:
Q  99 tggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgac-tatatatata 182  Q
    ||||||||| | |||||| || |  |||||||||| |||| ||||||||||||| | |||||||||||||| || ||||||||||    
T  34600333 tggattaaataaaataaacggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatcctaacttatatatata 34600249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 22799764 - 22799823
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgac-tatatatata 182  Q
    |||||||||| |||| |||| |||||||| ||||||||||||| ||||| ||||||||||    
T  22799764 gatttggtgtcaacgaattcattgacacctggtgtcaacggattctgacttatatatata 22799823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 28705212 - 28705153
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| ||||||||||||| |||||| |||||||||    
T  28705212 gatttggtgtaaacgaatccgttgacacctggtgtcaacggatactgactcatatatata 28705153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 28705883 - 28705942
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||| |||| |||| || |||||||||| |||||||||||||||||||| |||||||||    
T  28705883 gatttagtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatata 28705942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 6476795 - 6476841
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 170  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||    
T  6476795 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 6476841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 33471093 - 33471151
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||| ||| |||| ||||||||||||  ||||||||| |||||| ||||||||||||    
T  33471093 gatttgttgtcaacgaattcgttgacacgtggtgtcaacagatcctaactatatatata 33471151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 43510278 - 43510221
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||||||| ||  ||||||||| |||||||||||||||| ||| ||| ||||    
T  43510278 atttggtgttaacgaatctgttgacacctggtgtcaacggatcctaactctatctata 43510221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 182
Target Start/End: Complemental strand, 6476097 - 6476057
Alignment:
Q  143 cgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||||||||||||||||||||| || |||||||||    
T  6476097 cgttgacaccaggtgtcaacggatcctgtctcatatatata 6476057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 34600812 - 34600880
Alignment:
Q  101 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    ||||||| | |||||| || | ||||||||||| |||| ||||||| ||||| |||||||| |||||||    
T  34600812 gattaaataaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaagggatcct 34600880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 36038742 - 36038698
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcc 168  Q
    ||||||||||||||| || |||||| ||| |||||||||||||||    
T  36038742 gatttggtgttaacgaatccgttgatacctggtgtcaacggatcc 36038698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 64; Significance: 3e-28; HSPs: 4)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 54 - 157
Target Start/End: Original strand, 16581 - 16684
Alignment:
Q  54 tggagaacggttcacgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacacca 153  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||||||||||||  || |||||||||| ||||||||||||||  || |||||||||||    
T  16581 tggagaaaggttcacgtgagttaatttcacaataattatgacccttggattaaatgtattaaatggctaagatttggtgttaacaaatccgttgacacca 16680  T
Q  154 ggtg 157  Q
    ||||    
T  16681 ggtg 16684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 22076 - 22133
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||| |||| || |||||||||| ||||||||||||||||| || ||||||||    
T  22076 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctctatatata 22133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 15070 - 15021
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||| || | || ||||||||| |||||||||||||||||||||    
T  15070 gatttggtgtcaatgaatccgttgacactaggtgtcaacggatcctgact 15021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 15129 - 15080
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||| || | || ||||||||| |||||||||||||||||||||    
T  15129 gatttggtgtcaatgaatccgttgacactaggtgtcaacggatcctgact 15080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 1e-24; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 982352 - 982457
Alignment:
Q  28 gagtgtgcaaattaggggggattaagtggagaacggttcacgtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatt 127  Q
    ||||||||| |||||| ||||| || |||||||  |||||||||||||||||||||| |||||| |||||||||||||||  || |||||||||| ||||    
T  982352 gagtgtgcagattaggagggatcaaatggagaaaagttcacgtgagttaatttcacaataattatgacccttggattaaatgtattaaatggctaagatt 982451  T
Q  128 tggtgt 133  Q
    ||||||    
T  982452 tggtgt 982457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 35718479 - 35718410
Alignment:
Q  69 gtgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacg 138  Q
    |||||||||||||||| ||||||||||  |||||||||||||| |||||||||| |||||||||| ||||    
T  35718479 gtgagttaatttcacaataattaggacatttggattaaacatattaaatggctaagatttggtgtcaacg 35718410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 33277509 - 33277567
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||    
T  33277509 gatttggtgttaacgaattcgttgacacctggtgtcaacggattctgactctatatata 33277567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 10847339 - 10847290
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  10847339 gatttagtgttaacgaattcgttgacaccaggtgtcaacggatcctgact 10847290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 20213536 - 20213594
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| |||||| |||||| |||||||||||||||||||| ||||||||    
T  20213536 gatttggtgtcaacgaattcgtcgacacctggtgtcaacggatcctgactctatatata 20213594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 51827499 - 51827557
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||  |||| || ||||||||||||||||||||||||| ||||||||||||||    
T  51827499 gatttggtgacaacgaatccgttgacaccaggtgtcaacggatcttgactatatatata 51827557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 14871201 - 14871152
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  14871201 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgact 14871152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 13477114 - 13477046
Alignment:
Q  115 aatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||| || |||||||||| || | ||||||||||||| |||||||||||||||||||| |||||||||    
T  13477114 aatggttaggatttggtgtcaatgaattcgttgacacctggtgtcaacggatcctgactcatatatata 13477046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 37988214 - 37988282
Alignment:
Q  115 aatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||  |||||||||| |||| ||||||||||||| |||||||| ||||||||||| |||||||||    
T  37988214 aatggctgagatttggtgtcaacgaattcgttgacacctggtgtcaatggatcctgactcatatatata 37988282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 20213028 - 20212969
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| ||||||||||||| ||||||||||||| |||||| |||||||||    
T  20213028 gatttggtgtcaacgaattcgttgacacctggtgtcaacggattctgactcatatatata 20212969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 35719158 - 35719228
Alignment:
Q  70 tgagttaatttcacagtaattaggacccttggattaaacataataaatggctacgatttggtgttaacggat 141  Q
    ||||||||||||||| |||||||||||||| | |||||||| || |||||||| |||||| ||| |||||||    
T  35719158 tgagttaatttcacaataattaggaccctttgtttaaacat-attaatggctaagatttgatgtcaacggat 35719228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 48648251 - 48648192
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||| |||||||||    
T  48648251 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatata 48648192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 45081395 - 45081457
Alignment:
Q  111 aataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||||||| |  |||||||||| |||| || ||||||||| |||||||||||||||||||||    
T  45081395 aataaatggttgagatttggtgtcaacgaatccgttgacactaggtgtcaacggatcctgact 45081457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 48765075 - 48765133
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| || | |||||||| |||||||| ||||||||||||||||||||    
T  48765075 gatttggtgtcaacgaatccattgacacctggtgtcaatggatcctgactatatatata 48765133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 33276978 - 33276881
Alignment:
Q  86 taattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||| ||||| || |||||||   |||||||||||| |||||||||| |||| || | |||||||||| ||| ||| |||||||||| |||||||||    
T  33276978 taatttggaccattagattaaaagaaataaatggctaggatttggtgtcaacgaatccattgacaccagatgttaacagatcctgactcatatatata 33276881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 44029774 - 44029823
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||| || |||||| ||||||||||||||| ||||||||||||||||||    
T  44029774 gatttagtattaacgaattcgttgacaccagatgtcaacggatcctgact 44029823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 265103 - 265159
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatata 180  Q
    |||||||||| |||| || |||||||||| |||||||||||||| |||||| |||||    
T  265103 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcatgactacatata 265159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 8950024 - 8949924
Alignment:
Q  84 agtaattaggacccttggattaaacata-ataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgac-tatatatat 181  Q
    |||||||| || |||| ||||||| ||| ||  |||| || ||||| |||| |||||||||||||||||  |||||||||||||||| || |||||||||    
T  8950024 agtaattatgagcctttgattaaaaatagatggatggttaagattttgtgtcaacggattcgttgacacatggtgtcaacggatcctaacttatatatat 8949925  T
Q  182 a 182  Q
    |    
T  8949924 a 8949924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 10847876 - 10847972
Alignment:
Q  86 taattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||| ||||| || |||||||   |||||||||||| |||||||||| || | ||  ||||||||| ||||| |||||||| ||| ||||||||||    
T  10847876 taatttggaccattagattaaaagaaataaatggctaggatttggtgtcaatgaatctgttgacacctggtgttaacggatcttgattatatatata 10847972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 37520566 - 37520614
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgac 172  Q
    |||||||||| |||| ||||||||||||| ||| |||||||||||||||    
T  37520566 gatttggtgtcaacgaattcgttgacacctggtatcaacggatcctgac 37520614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 44699812 - 44699880
Alignment:
Q  111 aataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatat 179  Q
    ||||||||| ||  ||||||||| |||| || |||||||||| ||||||| | ||||||||||||||||    
T  44699812 aataaatggttaatatttggtgtcaacgaatccgttgacacctggtgtcagctgatcctgactatatat 44699880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 46150721 - 46150789
Alignment:
Q  111 aataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatat 179  Q
    ||||||||| |  |||||||||| |||| || ||||||||||  ||||||||||||||||||| |||||    
T  46150721 aataaatggttgagatttggtgtcaacgaatccgttgacacctagtgtcaacggatcctgactctatat 46150789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 21727534 - 21727593
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||| || |||||||||    
T  21727534 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctcatatatata 21727593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 27082824 - 27082765
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| |||||||||||||  ||||||| ||||||||||| |||||||||    
T  27082824 gatttggtgtcaacgaattcgttgacacctagtgtcaatggatcctgactcatatatata 27082765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 48764525 - 48764466
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| ||||||||||||| | |||||| ||||||||||| |||||||||    
T  48764525 gatttggtgtcaacgaattcgttgacacctgatgtcaatggatcctgactcatatatata 48764466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 981715 - 981673
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggat 166  Q
    |||||||||| |||| ||||||||||||| |||||||||||||    
T  981715 gatttggtgtcaacgaattcgttgacacctggtgtcaacggat 981673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 17603216 - 17603158
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||   ||||||||||    
T  17603216 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctatatatatatata 17603158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 48507037 - 48507083
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 170  Q
    |||||||||| |||| |||| |||||||| |||||||||||||||||    
T  48507037 gatttggtgtcaacgaattcattgacacctggtgtcaacggatcctg 48507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 40872814 - 40872871
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||| || | || |||||||||| |||||||||||||| | ||||||||||||    
T  40872814 atttggtgtcaatgaatccgttgacacctggtgtcaacggatcttaactatatatata 40872871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 52266458 - 52266507
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||| |||| ||||||| ||||| ||||| ||||||||||||||    
T  52266458 gatttggtgtcaacgaattcgttaacacctggtgttaacggatcctgact 52266507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 52281845 - 52281756
Alignment:
Q  93 gacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||| |||||| ||||| ||||| ||| |  ||| |||||| |||| || |||||||||||||| ||||||||| |||||| | ||||||    
T  52281845 gaccattggatcaaacaaaataagtggttgagatctggtgtcaacgaatccgttgacaccaggtatcaacggattctgactctctatata 52281756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 173
Target Start/End: Original strand, 52605504 - 52605537
Alignment:
Q  140 attcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||||||||||| ||||||||||||||||||||    
T  52605504 attcgttgacacctggtgtcaacggatcctgact 52605537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 54458670 - 54458715
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    |||||||||| |||  || |||||||||||||||||||||||||||    
T  54458670 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatcct 54458715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 55373755 - 55373727
Alignment:
Q  138 ggattcgttgacaccaggtgtcaacggat 166  Q
    |||||||||||||||||||||||||||||    
T  55373755 ggattcgttgacaccaggtgtcaacggat 55373727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 8e-23; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 37852570 - 37852512
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37852570 gatttggtgttaacgaattcgttgacaccaggtgtcaacggatcctgactatatatata 37852512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 28181580 - 28181522
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||    
T  28181580 gatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcctcactatatatata 28181522  T

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Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 12760823 - 12760764
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||| |||||||||    
T  12760823 gatttgatgttaacgaattcgttgacaccaggtgtcaacggatcctaactcatatatata 12760764  T

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Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 143 - 182
Target Start/End: Complemental strand, 36389803 - 36389764
Alignment:
Q  143 cgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  36389803 cgttgacaccaggtgtcaacggatcctgactatatatata 36389764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 36390372 - 36390431
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||||||||||||||||| |||||||||||||||| ||| |||||||||    
T  36390372 gatttggtgtcaacggattcgttgacacctggtgtcaacggatcctaactcatatatata 36390431  T

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Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 12761501 - 12761559
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||||||||| ||||||||||||| |||| ||| ||||||| ||||||||||||    
T  12761501 gatttggtgttaacgaattcgttgacacctggtgccaatggatcctaactatatatata 12761559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 25469091 - 25469149
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||| ||||||||    
T  25469091 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctatatata 25469149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 25671226 - 25671168
Alignment:
Q  115 aatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||| || ||||||||||||||| || |||| ||||||||||||||||||||||||||    
T  25671226 aatggttaggatttggtgttaacgaatccgttaacaccaggtgtcaacggatcctgact 25671168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 30663981 - 30664030
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||| |||| || |||||||||||||||||||||||||||||||    
T  30663981 gatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctgact 30664030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 7406292 - 7406233
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| ||||||| ||||| |||||||||||||||||||| |||||||||    
T  7406292 gatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctgactcatatatata 7406233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 7559204 - 7559263
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||| || |||||||||    
T  7559204 gatttggtgtcaacggatccgttgacacctggtgtcaacggatcctgtctcatatatata 7559263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 49681678 - 49681736
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||||||||||||| | | ||||||||||||||||| || ||||||||    
T  49681678 gatttggtgtcaacggattcgttgatatctggtgtcaacggatcctgtctctatatata 49681736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 4439211 - 4439256
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    |||||||||| |||| || |||||||||||||||||||||||||||    
T  4439211 gatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcct 4439256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 13262880 - 13262835
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||    
T  13262880 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 13262835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 17171977 - 17171920
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||  || ||||||||    
T  17171977 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcctatctctatatata 17171920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 36689071 - 36689128
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||| |||| |||||||||||| ||||| |||||||| | ||||||||||||||||||    
T  36689071 attttgtgtcaacggattcgttaacacctggtgtcaatgaatcctgactatatatata 36689128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 36705171 - 36705228
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||| |||| |||||||||||| ||||| |||||||| | ||||||||||||||||||    
T  36705171 attttgtgtcaacggattcgttaacacctggtgtcaatgaatcctgactatatatata 36705228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 37853102 - 37853199
Alignment:
Q  86 taattaggacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||| ||||| || |||||||   ||||||||||||  ||||||||| |||| || |||||||||| | ||| |||||||||||||| |||||||||    
T  37853102 taatttggaccattagattaaaagaaataaatggctaaaatttggtgtcaacgaatccgttgacacctgatgttaacggatcctgactcatatatata 37853199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 26118701 - 26118657
Alignment:
Q  143 cgttgacaccaggtgtcaacggatcctgactatatatatacatga 187  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||    
T  26118701 cgttgacatctggtgtcaacggatcctgactatatatatatatga 26118657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 19172580 - 19172639
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||| ||||||||||| |||||||||    
T  19172580 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactcatatatata 19172639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 49680858 - 49680799
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| |||||||||    
T  49680858 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactcatatatata 49680799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 173
Target Start/End: Original strand, 9778996 - 9779026
Alignment:
Q  143 cgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||||||||||||||||||||||||    
T  9778996 cgttgacaccaggtgtcaacggatcctgact 9779026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 27256718 - 27256776
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||| |||| || |||||||||| ||||||||||||||||| || |||||||||    
T  27256718 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcctgtctcatatatata 27256776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 30932800 - 30932858
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||  |||| || |||||||||| |||||||||||||||| ||| ||||||||    
T  30932800 gatttggtgccaacgaatccgttgacacctggtgtcaacggatcctcactctatatata 30932858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 34309235 - 34309281
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 170  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||    
T  34309235 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 34309281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 46909387 - 46909425
Alignment:
Q  144 gttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  46909387 gttgacatctggtgtcaacggatcctgactatatatata 46909425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 4433852 - 4433897
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    |||||||||| |||| || |||||||||| ||||||||||||||||    
T  4433852 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 4433897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 13263521 - 13263570
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||| |||| || | |||||||| ||||||||||||||||||||    
T  13263521 gatttggtgtcaacgaatccattgacacctggtgtcaacggatcctgact 13263570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 30663405 - 30663356
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||| |||| || |||||| ||| ||||||||||||||||||||    
T  30663405 gatttggtgtcaacgaatccgttgatacctggtgtcaacggatcctgact 30663356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 170
Target Start/End: Complemental strand, 34308519 - 34308474
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 170  Q
    ||||||||| |||| || |||||||||| |||||||||||||||||    
T  34308519 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcctg 34308474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 50271788 - 50271837
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||| |||| |||| |||| ||| ||||||||||||||||||||    
T  50271788 gatttggtgtcaacgaattcattgatacctggtgtcaacggatcctgact 50271837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 182
Target Start/End: Complemental strand, 43251953 - 43251925
Alignment:
Q  154 ggtgtcaacggatcctgactatatatata 182  Q
    |||||||||||||||||||||||||||||    
T  43251953 ggtgtcaacggatcctgactatatatata 43251925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 20833972 - 20834029
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  20833972 atttggtgtcaacggattcgttaacacctggtgtcaacggatcctgactatatatata 20834029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 8489284 - 8489333
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  8489284 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctgact 8489333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 26529517 - 26529575
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||| ||||||||    
T  26529517 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctatatata 26529575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 33436278 - 33436336
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| || |||||||| | |||||||||||||||||||||||||||||    
T  33436278 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactatatatata 33436336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 19311831 - 19311887
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatata 180  Q
    |||||||||| |||| || |||||||||| |||||||||| ||||||||||||||||    
T  19311831 gatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcctgactatatata 19311887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 10171323 - 10171264
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||| |||||||||    
T  10171323 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatata 10171264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 19323771 - 19323830
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||| || |||||||||    
T  19323771 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgtctcatatatata 19323830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 2512484 - 2512426
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||| || |||||||||    
T  2512484 atttggtgtcaacgaattcgttgacatcaggtgtcaacggatcctgtctcatatatata 2512426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 10171970 - 10172028
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| ||||||||    
T  10171970 gatttggtgtcaacgaatgcgttgacacctggtgtcaacggatcctaactctatatata 10172028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 26528870 - 26528811
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||| ||| |||||||||    
T  26528870 gatttggtgtcaacgaatgcgttgacacctggtgtcaacggatcctaactcatatatata 26528811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 33435387 - 33435328
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||| |||||||||||||||||||||| ||| |||||||||    
T  33435387 gatttggtgtcaacgaatccgttaacaccaggtgtcaacggatcctaactcatatatata 33435328  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 168
Target Start/End: Original strand, 9441240 - 9441270
Alignment:
Q  138 ggattcgttgacaccaggtgtcaacggatcc 168  Q
    |||||||||||||||||||||||||||||||    
T  9441240 ggattcgttgacaccaggtgtcaacggatcc 9441270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 21133208 - 21133290
Alignment:
Q  101 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||| | |||||| || || |||||||||| |||| ||||||| ||||  |||||||||||||||| ||| |||||||||    
T  21133208 gattaaataaaataaacggttaagatttggtgtcaacgaattcgttaacacatggtgtcaacggatcctaactcatatatata 21133290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 3623728 - 3623796
Alignment:
Q  101 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    ||||||| | |||||| || | ||||||||||| |||| ||||||| ||| | ||||||||||||||||    
T  3623728 gattaaataaaataaacggttgcgatttggtgtcaacgaattcgttaacatctggtgtcaacggatcct 3623796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 182
Target Start/End: Complemental strand, 7449819 - 7449791
Alignment:
Q  154 ggtgtcaacggatcctgactatatatata 182  Q
    |||||||||||||||||||||||||||||    
T  7449819 ggtgtcaacggatcctgactatatatata 7449791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 19311875 - 19311847
Alignment:
Q  138 ggattcgttgacaccaggtgtcaacggat 166  Q
    |||||||||||||||||||||||||||||    
T  19311875 ggattcgttgacaccaggtgtcaacggat 19311847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 31329713 - 31329781
Alignment:
Q  115 aatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||| || ||||||||||||||| || |||||||||| |||||||||||||||||||| |||||||||    
T  31329713 aatggttaggatttggtgttaacgaatccgttgacacctggtgtcaacggatcctgactcatatatata 31329781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 44469540 - 44469482
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| ||||||||||||| ||||||| |||||| ||||||||||||||    
T  44469540 gatttggtgtcaacgaattcgttgacacctggtgtcatcggatcatgactatatatata 44469482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 44792641 - 44792690
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  44792641 gatttggtgttaacgaattcgttgacacctggtgtcaatggatcctgact 44792690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 26147037 - 26147096
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||| ||| |||||||||    
T  26147037 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctaactcatatatata 26147096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 47688459 - 47688542
Alignment:
Q  99 tggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||| | |||||| || |  |||||||||| |||| || |||||||||| |||||||||||||||| ||| ||||||||    
T  47688459 tggattaaataaaataaacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatata 47688542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 599306 - 599364
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| || |||||||||||||||||||||||||||   ||||||||||    
T  599306 gatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctatatatatatata 599364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 11939446 - 11939504
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||| |||| |||| || ||||||||| ||||||||||||||||| ||||||||||||    
T  11939446 gatttcgtgtcaacgaatccgttgacactaggtgtcaacggatcctaactatatatata 11939504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 30573714 - 30573772
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||| ||||||||||| ||||||||    
T  30573714 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactctatatata 30573772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 40347602 - 40347556
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 170  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||    
T  40347602 gatttggtgtaaacggattcgttgacacctggtgtcaatggatcctg 40347556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 44791772 - 44791714
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||||||||| ||||||||||||| |||| ||| ||||||||||| | ||||||    
T  44791772 gatttggtgttaacgaattcgttgacacctggtgccaatggatcctgactctttatata 44791714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 182
Target Start/End: Complemental strand, 47687980 - 47687898
Alignment:
Q  101 gattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||| | |||||| || | ||||||||||| |||| ||||||| ||||| |||||||||||||||| ||| |||||||||    
T  47687980 gattaaataaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctaactcatatatata 47687898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 598573 - 598524
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||||||||||||| ||||||||||| | ||||||||| ||||||||||    
T  598573 gatttggtgttaacgaattcgttgacatctggtgtcaacagatcctgact 598524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 8247744 - 8247695
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    ||||| |||| |||| || |||||||||||||||||||||||||||||||    
T  8247744 gattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcctgact 8247695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 16903701 - 16903664
Alignment:
Q  129 ggtgttaacggattcgttgacaccaggtgtcaacggat 166  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  16903701 ggtgtcaacggattcgttgacaccaggtgtcaacggat 16903664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 24374837 - 24374788
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||||||||| |||| ||||||||||| | ||||||||||||||||||||    
T  24374837 gatttggtgtcaacgaattcgttgacagctggtgtcaacggatcctgact 24374788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 40495141 - 40495084
Alignment:
Q  126 tttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||| |||| ||| ||||||||| |||||||||||||||||||| |||||||||    
T  40495141 tttggtgtcaacgaatttgttgacacctggtgtcaacggatcctgactcatatatata 40495084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 53772854 - 53772797
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||| |||| || |||||||||| |||||||||||||||| ||| ||||||||    
T  53772854 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctatatata 53772797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 9365248 - 9365168
Alignment:
Q  93 gacccttggattaaacataataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact 173  Q
    |||| |||||| ||||| ||||| ||| |  |||||||||| |||  ||||||||||||| ||||| ||||||||||||||    
T  9365248 gaccattggatcaaacaaaataagtggttgagatttggtgtcaacaaattcgttgacacctggtgttaacggatcctgact 9365168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 2446166 - 2446225
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||||||||| ||  ||||||||| |||||||||||||||| ||| |||||||||    
T  2446166 gatttggtgttaacgaatctgttgacacctggtgtcaacggatcctaactcatatatata 2446225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 7841839 - 7841783
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||| ||| ||||||||    
T  7841839 gatttggtgtcaacgaattcgttgacacca--tgtcaacggatcctaactctatatata 7841783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 8248525 - 8248584
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||| | |||||||||||||||||||| |||||||||    
T  8248525 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactcatatatata 8248584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 8266190 - 8266249
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||| | |||||||||||||||||||| |||||||||    
T  8266190 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactcatatatata 8266249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 20774185 - 20774244
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||| ||||||||||| |||||||||    
T  20774185 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactcatatatata 20774244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 142488 - 142574
Alignment:
Q  84 agtaattaggacccttggattaaacata-ataaatggctacgatttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    |||||||| || |||| ||||||| ||| ||  |||| || |||||||||| || | ||||||||||||| ||||||||||||||||    
T  142488 agtaattatgagcctttgattaaaaatagatggatggttaagatttggtgtcaatgaattcgttgacacccggtgtcaacggatcct 142574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 1465348 - 1465310
Alignment:
Q  144 gttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  1465348 gttgacacctggtgtcaacggatcctgactctatatata 1465310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 56262526 - 56262480
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 170  Q
    |||||||||| |||| |||| |||||||| |||||||||||||||||    
T  56262526 gatttggtgtcaacgaattcattgacacctggtgtcaacggatcctg 56262480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 56263077 - 56263123
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctg 170  Q
    |||||||||| |||||||||||||||||| |||||||| ||| ||||    
T  56263077 gatttggtgtaaacggattcgttgacacctggtgtcaatggaacctg 56263123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 2444419 - 2444375
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcct 169  Q
    ||||||||| |||| || |||||||||| ||||||||||||||||    
T  2444419 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 2444375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 8265409 - 8265365
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcc 168  Q
    ||||| |||| |||| || ||||||||||||||||||||||||||    
T  8265409 gattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcc 8265365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 16903717 - 16903689
Alignment:
Q  138 ggattcgttgacaccaggtgtcaacggat 166  Q
    |||||||||||||||||||||||||||||    
T  16903717 ggattcgttgacaccaggtgtcaacggat 16903689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 182
Target Start/End: Complemental strand, 50450279 - 50450251
Alignment:
Q  154 ggtgtcaacggatcctgactatatatata 182  Q
    |||||||||||||||||||||||||||||    
T  50450279 ggtgtcaacggatcctgactatatatata 50450251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 428906 - 428964
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| ||||||||| ||| |||||||||||||||||||| ||||||||    
T  428906 gatttggtgtcaacgaattcgttgataccgggtgtcaacggatcctgactctatatata 428964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 26639 - 26580
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||| |||||||||    
T  26639 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactcatatatata 26580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1207 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 1634 - 1576
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||| ||||||||||||| ||||||||| |||||||  ||||||||||    
T  1634 gatttggtgtcaacgaattcgttgacacctggtgtcaaccgatcctgtatatatatata 1576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 6891 - 6948
Alignment:
Q  126 tttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    |||||||| |||| ||| ||||||||| |||||||||||||||||||| |||||||||    
T  6891 tttggtgtcaacgaatttgttgacacctggtgtcaacggatcctgactcatatatata 6948  T

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Target: scaffold0086 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 8296 - 8355
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||||||||| || |||||||||| |||||||| ||||||| ||| |||||||||    
T  8296 gatttggtgttaacgaatacgttgacacctggtgtcaatggatcctaactcatatatata 8355  T

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Target: scaffold0504 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 5385 - 5443
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||| |||  || |||||||||| |||||||||||||||||||| |||||||||    
T  5385 atttggtgtcaacaaatccgttgacacctggtgtcaacggatcctgactcatatatata 5443  T

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Target: scaffold0164 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 11718 - 11660
Alignment:
Q  124 gatttggtgttaacggattcgttgacaccaggtgtcaacggatcctgactatatatata 182  Q
    |||||||||| |||  ||||||||| | | | |||||||||||||||||||||||||||    
T  11718 gatttggtgtcaactaattcgttgaaatctgatgtcaacggatcctgactatatatata 11660  T

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Target: scaffold0096 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 39942 - 39884
Alignment:
Q  125 atttggtgttaacggattcgttgacaccaggtgtcaacggatcctgact-atatatata 182  Q
    ||||||||| |||| || |||||||||| ||||||||||||| |||||| |||||||||    
T  39942 atttggtgtcaacgaatccgttgacacctggtgtcaacggattctgactcatatatata 39884  T

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