View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1145_high_14 (Length: 528)
Name: NF1145_high_14
Description: NF1145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1145_high_14 |
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Alignment Details
Target: chr6 (Bit Score: 457; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 457; E-Value: 0
Query Start/End: Original strand, 26 - 522
Target Start/End: Complemental strand, 1723150 - 1722653
Alignment:
| Q |
26 |
ctacctacattttttcagtnnnnnnntctacattttaattcaagaatattttaaaattattagagtgtacactaatactttaaaattattgcacataacg |
125 |
Q |
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| T |
1723150 |
ctacctacattttttccgtaaaaaaatctacattttaattcaagaatattttaaaattattagagtgtacactaatactttaaaattattgcacataacg |
1723051 |
T |
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| Q |
126 |
aaatattgtgtatatattaattcaagaatatttttaataagtttatataaaccttccatgtgtcagccagttgtcttttccattgattaaattatacggg |
225 |
Q |
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| T |
1723050 |
acatattgtgtatatattaattcaagaatatttttaataagtttatataaaccttccatgtgtcagccagttgtcttttccattggttaaattatacggg |
1722951 |
T |
|
| Q |
226 |
aatatatcttgacccaatagaaaatacatgaaaataaaataaacaaagtgatccatccactcgtcctaataagaagtaatggcttgatttgctttatcct |
325 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1722950 |
aatatatcttgacccaatagaaaatacatgaaaataaaataaacaaagtgatccatccactcgtcctaataagaagtaatggcttgatttgctttatcct |
1722851 |
T |
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| Q |
326 |
ttacaagataacaattaaaatttgtgagaatctttcttgaagagatgatataaaaactacgttactcaaatttcaacaatatattattctccatcttcc- |
424 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1722850 |
ttacaagataacaattaaaatttgtgagaatctttcttgaagagatgatataaaaactacgttactcaaatttcaacaatatattattctccatcttcca |
1722751 |
T |
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| Q |
425 |
aagcatctcatgaatatggaatcaagggaacaattcacgttttatgccacctagaaacatgtgatatattagcacctatgtatattctccaccccaca |
522 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1722750 |
aagcatctcatgaatatggaatcaagggaacaattcacgttttatgccacctagaaacatgtgatatattagcacctatgtatattctccaccccaca |
1722653 |
T |
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