View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1145_high_3 (Length: 705)

Name: NF1145_high_3
Description: NF1145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1145_high_3
NF1145_high_3
[»] chr2 (57 HSPs)
chr2 (117-551)||(19525428-19525862)
chr2 (601-700)||(19525331-19525430)
chr2 (403-567)||(33827585-33827753)
chr2 (403-484)||(8192450-8192531)
chr2 (403-567)||(44946065-44946233)
chr2 (497-567)||(3943855-3943925)
chr2 (405-567)||(28194150-28194311)
chr2 (440-567)||(15038013-15038144)
chr2 (440-567)||(35171854-35171985)
chr2 (394-567)||(36242324-36242501)
chr2 (497-563)||(41329957-41330023)
chr2 (440-567)||(25293220-25293344)
chr2 (497-567)||(11941222-11941292)
chr2 (403-489)||(19605939-19606025)
chr2 (403-567)||(30466842-30467010)
chr2 (497-567)||(31778146-31778216)
chr2 (410-479)||(18708501-18708570)
chr2 (395-567)||(5394026-5394202)
chr2 (394-567)||(43374342-43374514)
chr2 (499-563)||(44610156-44610220)
chr2 (440-567)||(2140498-2140626)
chr2 (403-490)||(3405245-3405332)
chr2 (440-561)||(17324820-17324944)
chr2 (497-567)||(28668988-28669058)
chr2 (510-567)||(14486953-14487010)
chr2 (510-567)||(34516426-34516483)
chr2 (612-656)||(10953494-10953538)
chr2 (394-478)||(45271392-45271476)
chr2 (403-490)||(4618778-4618865)
chr2 (403-478)||(10582095-10582170)
chr2 (440-541)||(36390606-36390711)
chr2 (512-567)||(44929858-44929913)
chr2 (513-567)||(18976467-18976521)
chr2 (510-567)||(12543271-12543328)
chr2 (512-565)||(19054156-19054209)
chr2 (442-554)||(24196060-24196174)
chr2 (404-489)||(40591201-40591286)
chr2 (440-560)||(44976172-44976297)
chr2 (442-478)||(32845147-32845183)
chr2 (516-567)||(8192364-8192415)
chr2 (512-567)||(18692090-18692145)
chr2 (435-478)||(19244166-19244209)
chr2 (440-478)||(4567542-4567580)
chr2 (497-567)||(9400973-9401043)
chr2 (497-571)||(19849948-19850022)
chr2 (440-478)||(23787113-23787151)
chr2 (594-650)||(26521166-26521219)
chr2 (514-564)||(27269359-27269409)
chr2 (400-482)||(29698161-29698243)
chr2 (440-478)||(41314046-41314084)
chr2 (433-470)||(4060198-4060235)
chr2 (440-477)||(19174817-19174854)
chr2 (433-470)||(22363173-22363210)
chr2 (403-476)||(31536225-31536297)
chr2 (433-470)||(34041572-34041609)
chr2 (402-454)||(6099519-6099571)
chr2 (620-656)||(34553966-34554002)
[»] chr5 (50 HSPs)
chr5 (403-567)||(19145424-19145591)
chr5 (403-567)||(27498743-27498911)
chr5 (403-567)||(32059452-32059620)
chr5 (440-567)||(18207261-18207392)
chr5 (403-567)||(8484673-8484841)
chr5 (440-567)||(11926513-11926645)
chr5 (440-567)||(38684262-38684392)
chr5 (403-561)||(15641123-15641285)
chr5 (389-567)||(19456223-19456403)
chr5 (445-566)||(26009277-26009402)
chr5 (403-567)||(4603794-4603962)
chr5 (497-567)||(10869577-10869647)
chr5 (440-567)||(30485882-30486013)
chr5 (403-567)||(33709515-33709681)
chr5 (440-567)||(13038467-13038597)
chr5 (403-563)||(31287962-31288126)
chr5 (440-567)||(11464920-11465050)
chr5 (405-567)||(6014292-6014458)
chr5 (403-567)||(13108462-13108629)
chr5 (402-560)||(15485310-15485472)
chr5 (501-567)||(22693054-22693120)
chr5 (497-567)||(35425128-35425198)
chr5 (394-564)||(12398463-12398637)
chr5 (408-490)||(36895447-36895529)
chr5 (509-567)||(38630991-38631049)
chr5 (440-567)||(7085638-7085769)
chr5 (514-567)||(37495186-37495239)
chr5 (594-662)||(39646430-39646499)
chr5 (407-470)||(31074260-31074324)
chr5 (515-567)||(41351116-41351168)
chr5 (513-567)||(5067392-5067446)
chr5 (517-567)||(21377261-21377311)
chr5 (497-567)||(22392803-22392873)
chr5 (517-567)||(27487566-27487616)
chr5 (440-489)||(15931113-15931162)
chr5 (440-567)||(34310196-34310327)
chr5 (497-564)||(9659326-9659393)
chr5 (512-567)||(13659257-13659312)
chr5 (500-567)||(21236374-21236441)
chr5 (403-478)||(25586949-25587024)
chr5 (419-470)||(38990600-38990651)
chr5 (440-470)||(21589350-21589380)
chr5 (517-567)||(24158178-24158228)
chr5 (440-470)||(37495101-37495131)
chr5 (440-565)||(42193539-42193666)
chr5 (433-470)||(14285216-14285253)
chr5 (440-477)||(17015519-17015556)
chr5 (518-567)||(25750625-25750674)
chr5 (511-567)||(930498-930554)
chr5 (513-561)||(10813869-10813917)
[»] chr7 (52 HSPs)
chr7 (403-567)||(21835172-21835340)
chr7 (403-567)||(2751292-2751460)
chr7 (403-567)||(22119909-22120077)
chr7 (403-567)||(40542922-40543090)
chr7 (440-567)||(654717-654847)
chr7 (403-567)||(7275298-7275466)
chr7 (403-567)||(7175874-7176042)
chr7 (403-567)||(11997870-11998038)
chr7 (403-567)||(22703507-22703675)
chr7 (409-483)||(28646996-28647070)
chr7 (440-567)||(41907526-41907656)
chr7 (440-567)||(17196962-17197093)
chr7 (403-561)||(10091209-10091371)
chr7 (440-567)||(28089874-28090008)
chr7 (440-567)||(29861728-29861859)
chr7 (403-567)||(2344320-2344488)
chr7 (443-567)||(18044168-18044296)
chr7 (403-554)||(2103076-2103230)
chr7 (440-567)||(16374052-16374183)
chr7 (497-567)||(3851876-3851946)
chr7 (403-489)||(12211629-12211715)
chr7 (403-489)||(23330833-23330919)
chr7 (403-567)||(27312173-27312341)
chr7 (403-567)||(43785311-43785479)
chr7 (403-567)||(21574114-21574283)
chr7 (403-553)||(23012534-23012688)
chr7 (403-490)||(8435788-8435875)
chr7 (512-567)||(8943413-8943468)
chr7 (410-477)||(22696348-22696415)
chr7 (403-477)||(7799938-7800012)
chr7 (403-565)||(17212074-17212240)
chr7 (403-567)||(21217845-21218013)
chr7 (453-567)||(23092167-23092285)
chr7 (499-567)||(31197711-31197779)
chr7 (512-567)||(25333537-25333592)
chr7 (440-561)||(27704060-27704184)
chr7 (516-567)||(31712914-31712965)
chr7 (497-567)||(42913525-42913595)
chr7 (432-489)||(36173085-36173142)
chr7 (440-567)||(22638350-22638477)
chr7 (403-478)||(22299870-22299945)
chr7 (440-490)||(42814922-42814973)
chr7 (440-478)||(27009417-27009455)
chr7 (440-478)||(28950929-28950967)
chr7 (497-554)||(21373829-21373886)
chr7 (433-470)||(21558183-21558220)
chr7 (433-470)||(26459394-26459431)
chr7 (433-470)||(33181194-33181231)
chr7 (611-656)||(48433375-48433420)
chr7 (614-654)||(12270284-12270324)
chr7 (515-563)||(31274050-31274098)
chr7 (499-567)||(33137837-33137904)
[»] chr3 (59 HSPs)
chr3 (403-567)||(46576365-46576533)
chr3 (403-564)||(35492928-35493093)
chr3 (403-567)||(26174130-26174298)
chr3 (403-567)||(30257641-30257809)
chr3 (403-567)||(40133461-40133629)
chr3 (403-567)||(49258274-49258442)
chr3 (440-567)||(8456162-8456293)
chr3 (404-567)||(26158836-26158996)
chr3 (403-567)||(53424189-53424356)
chr3 (394-567)||(10190754-10190931)
chr3 (442-567)||(18176899-18177028)
chr3 (441-567)||(8097291-8097421)
chr3 (403-567)||(48977405-48977573)
chr3 (440-567)||(15566512-15566642)
chr3 (440-567)||(39041864-39041995)
chr3 (394-567)||(10083831-10084008)
chr3 (440-561)||(53233928-53234053)
chr3 (403-567)||(25289727-25289894)
chr3 (403-567)||(25379778-25379946)
chr3 (497-567)||(32151539-32151609)
chr3 (404-562)||(34844396-34844557)
chr3 (440-567)||(45272428-45272559)
chr3 (440-567)||(52821648-52821778)
chr3 (403-561)||(45529772-45529934)
chr3 (497-565)||(54475796-54475864)
chr3 (403-490)||(4252489-4252576)
chr3 (403-567)||(30807165-30807333)
chr3 (403-567)||(55371306-55371465)
chr3 (440-567)||(21362997-21363128)
chr3 (512-567)||(53848446-53848501)
chr3 (497-567)||(48104992-48105062)
chr3 (440-567)||(31537850-31537981)
chr3 (403-525)||(26108309-26108435)
chr3 (499-567)||(33398480-33398548)
chr3 (497-565)||(49167174-49167242)
chr3 (500-564)||(52455664-52455728)
chr3 (516-567)||(24407395-24407446)
chr3 (440-478)||(2511402-2511440)
chr3 (513-567)||(24165727-24165781)
chr3 (403-543)||(40940842-40940986)
chr3 (512-565)||(6041684-6041737)
chr3 (403-567)||(7485543-7485705)
chr3 (504-565)||(8958049-8958110)
chr3 (500-561)||(51532907-51532968)
chr3 (403-565)||(34492589-34492755)
chr3 (442-489)||(1178228-1178275)
chr3 (515-566)||(17579148-17579199)
chr3 (500-567)||(32094769-32094836)
chr3 (440-471)||(48972823-48972854)
chr3 (403-470)||(50162060-50162127)
chr3 (404-471)||(53863851-53863918)
chr3 (497-567)||(33698718-33698788)
chr3 (519-557)||(51390155-51390193)
chr3 (440-470)||(52455762-52455792)
chr3 (440-568)||(53288724-53288855)
chr3 (433-470)||(17155062-17155099)
chr3 (513-566)||(25017620-25017672)
chr3 (434-470)||(28703388-28703424)
chr3 (442-470)||(55287859-55287887)
[»] chr6 (33 HSPs)
chr6 (440-567)||(1344989-1345120)
chr6 (403-567)||(15360110-15360278)
chr6 (403-565)||(9208269-9208435)
chr6 (403-567)||(9238992-9239160)
chr6 (440-567)||(34147400-34147531)
chr6 (440-567)||(34160016-34160147)
chr6 (403-561)||(17149474-17149636)
chr6 (403-567)||(11448888-11449056)
chr6 (440-567)||(654158-654289)
chr6 (403-567)||(21982333-21982500)
chr6 (440-567)||(3222648-3222778)
chr6 (440-554)||(12390479-12390597)
chr6 (403-553)||(33499491-33499646)
chr6 (497-567)||(9844053-9844123)
chr6 (597-662)||(5964278-5964343)
chr6 (403-484)||(8479329-8479410)
chr6 (499-567)||(14212999-14213067)
chr6 (403-478)||(12591654-12591729)
chr6 (444-565)||(28672125-28672250)
chr6 (403-567)||(11007182-11007350)
chr6 (404-489)||(10377733-10377818)
chr6 (404-484)||(6383974-6384053)
chr6 (440-566)||(17081067-17081197)
chr6 (403-567)||(5360083-5360251)
chr6 (513-567)||(21148523-21148577)
chr6 (403-470)||(3907558-3907625)
chr6 (621-656)||(4433100-4433135)
chr6 (404-479)||(21182344-21182419)
chr6 (497-567)||(9690650-9690720)
chr6 (440-470)||(14212946-14212976)
chr6 (440-477)||(11840955-11840992)
chr6 (431-471)||(6691534-6691574)
chr6 (434-470)||(11306158-11306194)
[»] chr4 (60 HSPs)
chr4 (440-567)||(52983673-52983804)
chr4 (441-567)||(34723854-34723984)
chr4 (403-567)||(27528807-27528975)
chr4 (403-567)||(40058864-40059032)
chr4 (440-567)||(9517653-9517784)
chr4 (403-567)||(33696291-33696459)
chr4 (440-567)||(34844770-34844901)
chr4 (403-567)||(32986214-32986382)
chr4 (403-563)||(54127358-54127522)
chr4 (440-567)||(5609214-5609345)
chr4 (440-565)||(49287912-49288040)
chr4 (437-567)||(45787716-45787850)
chr4 (403-567)||(13771494-13771663)
chr4 (440-566)||(32990489-32990619)
chr4 (403-482)||(13017746-13017825)
chr4 (442-567)||(20566406-20566535)
chr4 (403-563)||(25852231-25852396)
chr4 (403-566)||(34835546-34835713)
chr4 (394-560)||(7391984-7392152)
chr4 (440-567)||(20077996-20078127)
chr4 (403-567)||(46714409-46714578)
chr4 (497-567)||(19660544-19660614)
chr4 (440-490)||(22630279-22630329)
chr4 (497-567)||(27574433-27574503)
chr4 (440-554)||(36131535-36131653)
chr4 (129-197)||(51498723-51498791)
chr4 (436-553)||(18875543-18875663)
chr4 (414-484)||(19220561-19220631)
chr4 (405-470)||(38869794-38869860)
chr4 (513-567)||(55158355-55158409)
chr4 (403-471)||(2351030-2351098)
chr4 (511-567)||(4064989-4065045)
chr4 (497-565)||(4912041-4912109)
chr4 (441-567)||(44343569-44343699)
chr4 (403-494)||(12710196-12710287)
chr4 (440-471)||(13873407-13873438)
chr4 (500-543)||(22625097-22625140)
chr4 (516-567)||(23639758-23639809)
chr4 (516-567)||(23645416-23645467)
chr4 (431-478)||(37455622-37455668)
chr4 (497-567)||(51535735-51535806)
chr4 (404-467)||(56409976-56410039)
chr4 (440-478)||(12500163-12500201)
chr4 (512-566)||(13017843-13017897)
chr4 (497-567)||(22488040-22488110)
chr4 (440-478)||(22625175-22625213)
chr4 (403-489)||(41621690-41621776)
chr4 (614-656)||(47442306-47442348)
chr4 (440-470)||(51535667-51535697)
chr4 (517-567)||(52494623-52494673)
chr4 (433-470)||(6666410-6666447)
chr4 (444-481)||(10125878-10125915)
chr4 (518-567)||(33289190-33289239)
chr4 (433-470)||(37109335-37109372)
chr4 (431-476)||(38740895-38740940)
chr4 (497-566)||(40252404-40252473)
chr4 (433-470)||(51250506-51250543)
chr4 (497-566)||(53787070-53787139)
chr4 (503-567)||(9978521-9978585)
chr4 (511-567)||(43719099-43719155)
[»] chr1 (57 HSPs)
chr1 (403-567)||(32729562-32729729)
chr1 (403-567)||(4621249-4621417)
chr1 (403-567)||(24674410-24674578)
chr1 (440-567)||(24122077-24122208)
chr1 (403-567)||(7197259-7197426)
chr1 (440-567)||(15059414-15059545)
chr1 (440-563)||(30677230-30677357)
chr1 (403-567)||(7578426-7578594)
chr1 (395-567)||(45859055-45859231)
chr1 (440-567)||(7766739-7766870)
chr1 (440-566)||(16899557-16899687)
chr1 (410-489)||(25237083-25237162)
chr1 (497-567)||(34778454-34778524)
chr1 (403-567)||(46607827-46607995)
chr1 (440-567)||(9500367-9500498)
chr1 (440-567)||(17935823-17935954)
chr1 (440-567)||(23734170-23734302)
chr1 (440-567)||(23741362-23741494)
chr1 (403-489)||(1486437-1486521)
chr1 (394-489)||(16539616-16539711)
chr1 (403-490)||(24216995-24217082)
chr1 (403-543)||(7946861-7947004)
chr1 (403-543)||(8077664-8077808)
chr1 (497-567)||(8254764-8254834)
chr1 (497-567)||(37351465-37351534)
chr1 (404-478)||(39964530-39964604)
chr1 (518-567)||(40145893-40145942)
chr1 (440-567)||(1378952-1379082)
chr1 (440-567)||(18646907-18647038)
chr1 (442-540)||(23232300-23232406)
chr1 (512-567)||(27454876-27454931)
chr1 (440-478)||(168255-168293)
chr1 (403-489)||(1138596-1138682)
chr1 (403-489)||(19034480-19034566)
chr1 (404-555)||(37047010-37047165)
chr1 (513-566)||(40802082-40802135)
chr1 (498-567)||(48699875-48699944)
chr1 (499-567)||(8779748-8779816)
chr1 (510-566)||(26513161-26513217)
chr1 (442-478)||(36155993-36156029)
chr1 (512-567)||(35138118-35138173)
chr1 (440-490)||(46113494-46113545)
chr1 (497-559)||(2537808-2537870)
chr1 (431-489)||(20907355-20907413)
chr1 (413-556)||(20999186-20999333)
chr1 (404-470)||(34228899-34228965)
chr1 (431-489)||(41470576-41470634)
chr1 (433-470)||(2799917-2799954)
chr1 (414-546)||(17447302-17447437)
chr1 (405-482)||(25496589-25496666)
chr1 (433-470)||(29753704-29753741)
chr1 (433-470)||(33700757-33700794)
chr1 (410-470)||(40810498-40810559)
chr1 (440-476)||(20487297-20487333)
chr1 (511-567)||(22910000-22910056)
chr1 (403-471)||(29057449-29057517)
chr1 (434-470)||(32524387-32524423)
[»] scaffold0576 (1 HSPs)
scaffold0576 (403-567)||(5094-5262)
[»] scaffold0217 (1 HSPs)
scaffold0217 (404-567)||(7321-7488)
[»] chr8 (51 HSPs)
chr8 (440-567)||(4718703-4718834)
chr8 (403-567)||(3734635-3734803)
chr8 (403-567)||(34237667-34237835)
chr8 (403-567)||(39349277-39349445)
chr8 (445-567)||(2618249-2618375)
chr8 (437-567)||(8765538-8765672)
chr8 (440-567)||(15259418-15259549)
chr8 (440-567)||(21603288-21603419)
chr8 (403-566)||(26168862-26169028)
chr8 (403-566)||(18128534-18128701)
chr8 (403-567)||(28193495-28193663)
chr8 (429-566)||(6953021-6953161)
chr8 (394-567)||(14632966-14633143)
chr8 (497-567)||(2639423-2639493)
chr8 (431-567)||(36094733-36094873)
chr8 (440-564)||(32879337-32879465)
chr8 (403-489)||(34639301-34639386)
chr8 (437-567)||(264412-264545)
chr8 (437-567)||(651376-651509)
chr8 (437-567)||(837111-837244)
chr8 (432-553)||(3403528-3403653)
chr8 (440-566)||(10292113-10292242)
chr8 (442-567)||(28908883-28909012)
chr8 (403-482)||(3794812-3794891)
chr8 (403-482)||(11714920-11714999)
chr8 (403-482)||(41070782-41070861)
chr8 (403-567)||(20305929-20306097)
chr8 (403-567)||(21092562-21092730)
chr8 (513-563)||(24018518-24018568)
chr8 (616-688)||(2577991-2578061)
chr8 (440-564)||(4698738-4698866)
chr8 (432-560)||(12312896-12313027)
chr8 (431-490)||(32206229-32206288)
chr8 (442-567)||(42328064-42328193)
chr8 (517-567)||(16990722-16990772)
chr8 (446-566)||(28964097-28964220)
chr8 (614-659)||(30051670-30051715)
chr8 (431-480)||(34694679-34694728)
chr8 (440-567)||(42643130-42643261)
chr8 (429-489)||(8387538-8387598)
chr8 (403-471)||(22200672-22200740)
chr8 (403-478)||(27746440-27746515)
chr8 (500-567)||(28088408-28088475)
chr8 (440-478)||(16317672-16317710)
chr8 (437-471)||(25248404-25248438)
chr8 (497-567)||(34610699-34610769)
chr8 (433-470)||(18540353-18540390)
chr8 (497-554)||(25248467-25248523)
chr8 (433-470)||(33017269-33017306)
chr8 (531-567)||(5740395-5740431)
chr8 (394-482)||(13749068-13749155)
[»] scaffold0028 (1 HSPs)
scaffold0028 (431-565)||(27821-27953)
[»] scaffold0019 (1 HSPs)
scaffold0019 (440-565)||(161863-161992)
[»] scaffold0016 (1 HSPs)
scaffold0016 (440-561)||(32342-32467)
[»] scaffold0070 (1 HSPs)
scaffold0070 (440-567)||(40379-40509)
[»] scaffold0623 (1 HSPs)
scaffold0623 (403-561)||(1074-1236)
[»] scaffold0366 (1 HSPs)
scaffold0366 (403-561)||(9317-9479)
[»] scaffold0049 (1 HSPs)
scaffold0049 (403-567)||(66779-66939)
[»] scaffold0102 (1 HSPs)
scaffold0102 (440-565)||(39146-39275)
[»] scaffold0026 (1 HSPs)
scaffold0026 (403-563)||(97382-97546)
[»] scaffold0051 (1 HSPs)
scaffold0051 (442-567)||(52883-53012)
[»] scaffold1175 (1 HSPs)
scaffold1175 (497-567)||(2438-2508)
[»] scaffold0160 (1 HSPs)
scaffold0160 (403-489)||(29236-29322)
[»] scaffold0020 (1 HSPs)
scaffold0020 (431-484)||(123150-123203)
[»] scaffold0328 (2 HSPs)
scaffold0328 (445-567)||(13059-13182)
scaffold0328 (497-567)||(15106-15175)
[»] scaffold0018 (1 HSPs)
scaffold0018 (621-673)||(70202-70254)
[»] scaffold0199 (1 HSPs)
scaffold0199 (403-482)||(8508-8587)
[»] scaffold0157 (1 HSPs)
scaffold0157 (440-478)||(20276-20314)
[»] scaffold0238 (1 HSPs)
scaffold0238 (433-470)||(2695-2732)
[»] scaffold0460 (1 HSPs)
scaffold0460 (440-476)||(8286-8322)
[»] scaffold0068 (1 HSPs)
scaffold0068 (497-561)||(41662-41726)


Alignment Details
Target: chr2 (Bit Score: 391; Significance: 0; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 117 - 551
Target Start/End: Complemental strand, 19525862 - 19525428
Alignment:
Q  117 caggattgtttgatgagattcattttggaaaccactttgctcttgatggagtgtcaagaccaaagtcagagatttgtaggtatgccacttagtcctatcc 216  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19525862 caggattgtttgatgagattcactttggaaaccactttgctcttgatggagtgtcaagaccaaagtcagagatttgtaggtatgcctcttagtcctatcc 19525763  T
Q  217 accttcatttctcctatatttttactccctaaataaaacttgtcacattcttaattcattcatccatggttatcaatattttatgcgagtcgtaatttga 316  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19525762 accttcatttctcctaaatttttactccctaaataaaacttgtcacattcttaattcattcatccatggttatcaatattttatgcgagtcgtattttga 19525663  T
Q  317 ttcgatataaaactgaacctggtcgatacgtagatttagtatatatgtataaatttgacatgaatctcgtcttgaatcccatctggggttggcttgggat 416  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19525662 ttcgatataaaactgaacctgatcgatacacagatttagtatatatgtataaatttgacatgaatctcgtcttgaatcccatctggggttggcttgggat 19525563  T
Q  417 cttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgctaatggctttaaatgaggccccc 516  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  19525562 cttgaagtgtgtttctctcaagatctcaggttcgattccctctggtgccaattttggtgggcaagtccatacaatgctaatggctttaaatgaggccccc 19525463  T
Q  517 gcaagtgggtggtgagattggtccccttggattag 551  Q
    |||||||||||||||||||||||||||||||||||    
T  19525462 gcaagtgggtggtgagattggtccccttggattag 19525428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 601 - 700
Target Start/End: Complemental strand, 19525430 - 19525331
Alignment:
Q  601 tagacaaccacttttttatcatttgatttatgactcgaatcttgaattattttgagattagtcgattatatagattagcttataggttgtctgtggtgct 700  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  19525430 tagacaaccacttttttatcatttgatttatgactcgaatcttgaattattttgagattagttgattatatagattagcttataggttgtctgtgttgct 19525331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 33827753 - 33827585
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || ||||||||||||||||||||||||||||||||  ||||| |||||| ||||  |||     ||    
T  33827753 ggttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccctctggtgccaatttcgttgggctaagtccatacagagcttgctctg 33827654  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | | |||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||    
T  33827653 gctttaaacgggacccctgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcgg 33827585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 403 - 484
Target Start/End: Complemental strand, 8192531 - 8192450
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtcc 484  Q
    |||||||||||||||||| || ||| | |||||||| ||||||||||||||||||||||||||||| || ||||||||||||    
T  8192531 ggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgccaatgtcggtgggcaagtcc 8192450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 44946233 - 44946065
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa----tgctaat 497  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||| ||||||||||||| |||||| |||||| ||||     ||||  |    
T  44946233 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagaacttgctc-t 44946135  T
Q  498 ggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||| | | |||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  44946134 ggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 44946065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 497 - 567
Target Start/End: Original strand, 3943855 - 3943925
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | ||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  3943855 tggctttaaacggggctcccgcaagtgggtggtgggattggtccccttggattagtcggttattggatcgg 3943925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 405 - 567
Target Start/End: Complemental strand, 28194311 - 28194150
Alignment:
Q  405 ttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgctaatggcttta 504  Q
    |||||||||||||||| || ||| | |||| ||| ||| ||||||||||| |||||||||||||||| |||||||||||| ||||  || ||  ||||      
T  28194311 ttggcttgggatcttggagtgtgctcctcttaaggtcttaggttcgattctctctggtgccaatttcggtgggcaagtccatacagagc-aaaagcttag 28194213  T
Q  505 aatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    || | ||||||||||||| || |||| |||||||| | |  ||||||||||| ||||||||||    
T  28194212 aacggggcccccgcaagtaggcggtgggattggtctcgtcagattagtcggtccttggatcgg 28194150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 15038013 - 15038144
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||| ||||  |||     |||||||||| |  ||||||||||||||| |||| ||||    
T  15038013 tctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaaacggagcccccgcaagtgggcggtgggatt 15038112  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||  ||||||||| ||||||||||||    
T  15038113 ggtcccctcagattagtcgattcttggatcgg 15038144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 35171854 - 35171985
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||||||||||||||||  |||||||| |||||| |||||| ||||  |||     |||||||||| | |||||||||||||||| |||| ||||    
T  35171854 tctcaggttcgattccctctggcaccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggatt 35171953  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| |||||| |||||    
T  35171954 ggtcccctcggattagtcgattcttgaatcgg 35171985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 394 - 567
Target Start/End: Complemental strand, 36242501 - 36242324
Alignment:
Q  394 cccatctggggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatg 492  Q
    ||||| |||||||||||||||||||||||   || | |||   || |||||||||||||||||||||||| ||||||| |||||| ||||||   ||  |    
T  36242501 cccatttggggttggcttgggatcttgaaatttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccagccagag 36242402  T
Q  493 ctaa---tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||     |||||||||| | || ||||||||||||| |||| |||||||||||| |||||| ||| ||||||||||||    
T  36242401 cttgctctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcgg 36242324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 497 - 563
Target Start/End: Original strand, 41329957 - 41330023
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttgga 563  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||  ||||||||||||||||||    
T  41329957 tggctttaaatggggcccccacaagtgggcggtgagattggtcccctcagattagtcggttcttgga 41330023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 25293220 - 25293344
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaatggctttaaatgaggcccc-cgcaagtgggtggtgagattgg 537  Q
    |||||||||||||||||||||||||||||||| |||||| |||| | ||    |||  |||||||||| | |||||| |||||||||| | || ||||||    
T  25293220 tctcaggttcgattccctctggtgccaatttcggtgggctaagttcata----gctc-tggctttaaacggggccccccgcaagtgggcgatgggattgg 25293314  T
Q  538 tccccttggattagtcggttcttggatcgg 567  Q
    |||||| |||||||||| ||||||||||||    
T  25293315 tcccctcggattagtcgattcttggatcgg 25293344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 11941292 - 11941222
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | | |||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  11941292 tggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 11941222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 403 - 489
Target Start/End: Complemental strand, 19606025 - 19605939
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    |||||||||||||||||| || | | | |||||||| ||||||||||||||||||||  ||| |||||| |||||||||||| ||||    
T  19606025 ggttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgattccctctaatgctaatttcggtgggcaagtccataca 19605939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 30467010 - 30466842
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||| ||||||| ||| ||  |||| ||||  || ||||||||||||||| ||||| |||||||||| |||||| |||||| ||||  |||     ||    
T  30467010 ggttggtttgggatattggagtttgttcctctagaggtctcaggttcgattctctctgctgccaatttcggtgggctaagtccatacagagcttgctctg 30466911  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||   ||||||||||||||||  ||| |||||||||| | |||||||||| ||||||||||||    
T  30466910 gctttaaaccgggcccccgcaagtgggcagtgggattggtcccttcggattagtcgattcttggatcgg 30466842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 497 - 567
Target Start/End: Original strand, 31778146 - 31778216
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||||| |||||||||||||||  |||||||||||||| ||  |||||||| |||||||||||||    
T  31778146 tggctttaaatggggcccccgcaagtggacggtgagattggtcctctcagattagtcagttcttggatcgg 31778216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 410 - 479
Target Start/End: Original strand, 18708501 - 18708570
Alignment:
Q  410 ttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggca 479  Q
    ||||||||||| || ||||| |||||||| |||||||||||| |||||||| | ||||||||||||||||    
T  18708501 ttgggatcttggagtgtgttcctctcaaggtctcaggttcgactccctctgataccaatttcagtgggca 18708570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 395 - 567
Target Start/End: Original strand, 5394026 - 5394202
Alignment:
Q  395 ccatctggggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtaca---- 489  Q
    |||| ||||||||||||| ||||||| ||  || | |||  ||| |||||||||||||||||||||||| |||||||  ||||| |||||| ||||        
T  5394026 ccatttggggttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcgatgggctaagtccatacagagt 5394125  T
Q  490 atgctaatggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
     ||||  || ||||||||| |||| ||||||||||| |||| |||||||||  | |||||||||||| ||| ||||||    
T  5394126 ttgct-ctgactttaaatggggccgccgcaagtgggcggtgggattggtccgttcggattagtcggtccttagatcgg 5394202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 394 - 567
Target Start/End: Complemental strand, 43374514 - 43374342
Alignment:
Q  394 cccatctggggttggcttgggatcttgaagcgtgtttctctca-agatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaat 491  Q
    ||||| ||||||||||||||||||||| ||  || | || ||| || |||||||||||||||||||||||||||||||| |||||| ||||   |||||     
T  43374514 cccatttggggttggcttgggatcttggagtttgctcct-tcagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtttatacaaa 43374416  T
Q  492 gct---aatggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||     |||||||||     ||||||||||||| | |||| |||||||||| | |||||||||| ||||||||||||    
T  43374415 gcttgctctggctttaa-----gcccccgcaagtgagcggtgggattggtcccttcggattagtcgattcttggatcgg 43374342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 499 - 563
Target Start/End: Original strand, 44610156 - 44610220
Alignment:
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttgga 563  Q
    |||||||||| |||||| ||||||||| |||| |||||||||| | |||||||||||||||||||    
T  44610156 gctttaaatggggcccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttgga 44610220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 2140626 - 2140498
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgctaa---tggctttaaatgaggccccc-gcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||| ||||||| ||||   ||||| ||||  |||     |||||||||||| | ||||| ||||||||| |||| ||||    
T  2140626 tctcaggttcgattccctctggtgtcaatttcggtgg---agtccatacagagcttgctctggctttaaatgggcccccccgcaagtgggcggtgggatt 2140530  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| || |||||||||    
T  2140529 ggtcccctcggattagtcgattattggatcgg 2140498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 403 - 490
Target Start/End: Complemental strand, 3405332 - 3405245
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaa 490  Q
    ||||| |||||||||||| |  ||| |  ||||||| || |||||||||||||||||||||||||||| | ||||||||||| |||||    
T  3405332 ggttgacttgggatcttggaatgtgctcatctcaaggtcacaggttcgattccctctggtgccaattttaatgggcaagtccatacaa 3405245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 440 - 561
Target Start/End: Original strand, 17324820 - 17324944
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||||| ||||||| |||||||| |||| ||||    
T  17324820 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatg-ggcccccacaagtgggcggtgggatt 17324918  T
Q  536 ggtccccttggattagtcggttcttg 561  Q
     |||||||   |||||||| ||||||    
T  17324919 agtcccctcaaattagtcgattcttg 17324944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 567
Target Start/End: Original strand, 28668988 - 28669058
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | ||||||| |||||||| |||| |||||||||||| |||||||||| || |||||||||    
T  28668988 tggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcgg 28669058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 510 - 567
Target Start/End: Original strand, 14486953 - 14487010
Alignment:
Q  510 ggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||| ||||||||| |||| |||||||||||| |||||||||||| ||||||||||    
T  14486953 ggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcgg 14487010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 510 - 567
Target Start/End: Complemental strand, 34516483 - 34516426
Alignment:
Q  510 ggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||| ||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  34516483 ggcccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 34516426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 656
Target Start/End: Complemental strand, 10953538 - 10953494
Alignment:
Q  612 ttttttatcatttgatttatgactcgaatcttgaattattttgag 656  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  10953538 ttttttctcatttgatttatgacttgaatcttgaattattttgag 10953494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 478
Target Start/End: Original strand, 45271392 - 45271476
Alignment:
Q  394 cccatctggggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    ||||| ||||||||||||||||||||  ||  || |||||   || | ||| |||||||||||||||||||||||||||||||||    
T  45271392 cccatttggggttggcttgggatcttagagtttgcttctccagaggtttcatgttcgattccctctggtgccaatttcagtgggc 45271476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 403 - 490
Target Start/End: Complemental strand, 4618865 - 4618778
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaa 490  Q
    ||||||||||| |||||| ||  || | |||||||| | |||||||||||| || |||||||||||||| | |||||||||| |||||    
T  4618865 ggttggcttggaatcttggagtatgctcctctcaaggtttcaggttcgatttcccctggtgccaatttcggcgggcaagtccatacaa 4618778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 403 - 478
Target Start/End: Complemental strand, 10582170 - 10582095
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| ||||||    
T  10582170 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggc 10582095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 440 - 541
Target Start/End: Complemental strand, 36390711 - 36390606
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||| ||||||||||||||||| |||| | |||||| ||||| |||     || ||||||||| | |||||||||||||| |||| ||||    
T  36390711 tctcaggttcgatttcctctggtgccaatttcggtggactaagtccatacaaagcttgctctgactttaaatgggacccccgcaagtgggcggtgggatt 36390612  T
Q  536 ggtccc 541  Q
    ||||||    
T  36390611 ggtccc 36390606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 512 - 567
Target Start/End: Complemental strand, 44929913 - 44929858
Alignment:
Q  512 cccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||||||  |||| |||||||||||||| |||||||| ||||||||||||    
T  44929913 cccccgcaagtggacggtgggattggtccccttgaattagtcgattcttggatcgg 44929858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 567
Target Start/End: Complemental strand, 18976521 - 18976467
Alignment:
Q  513 ccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||||| |||| |||||||||||| | |||||||| ||||||||||||    
T  18976521 ccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcgg 18976467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 567
Target Start/End: Original strand, 12543271 - 12543328
Alignment:
Q  510 ggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||||||| ||||| ||||| |||||||| |||||||||| |||| |||||    
T  12543271 ggcccccgcaagtggatggtgggattgctccccttgaattagtcggtccttgaatcgg 12543328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 565
Target Start/End: Original strand, 19054156 - 19054209
Alignment:
Q  512 cccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatc 565  Q
    |||||||||||||| |||| ||||||||| || |||||||||| ||||||||||    
T  19054156 cccccgcaagtgggcggtgggattggtccgctcggattagtcgattcttggatc 19054209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 442 - 554
Target Start/End: Original strand, 24196060 - 24196174
Alignment:
Q  442 tcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa----tgctaatggctttaaatgaggcccccgcaagtgggtggtgagattg 536  Q
    ||||||||||||||||||||||| |||||| |||||| |||||| ||||     ||||  |||||||||| | |  ||||||||||||| |||| |||||    
T  24196060 tcaggttcgattccctctggtgcaaatttcggtgggctaagtccatacagaacttgctc-tggctttaaacggg--ccccgcaagtgggcggtgggattg 24196156  T
Q  537 gtccccttggattagtcg 554  Q
    ||||||| ||||||||||    
T  24196157 gtcccctcggattagtcg 24196174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 489
Target Start/End: Original strand, 40591201 - 40591286
Alignment:
Q  404 gttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    ||||||||| ||||||| || ||| | |||||||  ||||||||| |||| | ||||||| ||||||| |||||||||||| ||||    
T  40591201 gttggcttgagatcttggagtgtgctcctctcaaagtctcaggtttgatttcttctggtggcaatttcggtgggcaagtccataca 40591286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 560
Target Start/End: Complemental strand, 44976297 - 44976172
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtaca----atgctaatggctttaaatgaggc-ccccgcaagtgggtggtgaga 533  Q
    |||||||||||||||||||||||||||||||  |||||| |||||| ||||     ||||  |||||||||| | ||| ||||||||||||| |||| ||    
T  44976297 tctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagtttgct-ctggctttaaacggggctccccgcaagtgggcggtggga 44976199  T
Q  534 ttggtccccttggattagtcggttctt 560  Q
    ||| |||| | |||||||||| |||||    
T  44976198 ttgatcccttcggattagtcgattctt 44976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 442 - 478
Target Start/End: Original strand, 32845147 - 32845183
Alignment:
Q  442 tcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||||||||||||||||||||||||||||| ||||||    
T  32845147 tcaggttcgattccctctggtgccaatttcggtgggc 32845183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 567
Target Start/End: Complemental strand, 8192415 - 8192364
Alignment:
Q  516 cgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| |||| |||||| ||||| |||||||||||| ||||||||||    
T  8192415 cgcaagtgggcggtgggattgggcccctcggattagtcggtccttggatcgg 8192364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 567
Target Start/End: Original strand, 18692090 - 18692145
Alignment:
Q  512 cccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||| |||||||| |||| |||||||||||| | |||||||| ||||||||||||    
T  18692090 cccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcgg 18692145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 435 - 478
Target Start/End: Original strand, 19244166 - 19244209
Alignment:
Q  435 caagatctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||| ||||||||||||||| ||||||||||||||| |||||||    
T  19244166 caaggtctcaggttcgattctctctggtgccaatttgagtgggc 19244209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 478
Target Start/End: Complemental strand, 4567580 - 4567542
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  4567580 tctcaggttcgatttcctctggtgccaatttcggtgggc 4567542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 9401043 - 9400973
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||   ||||||||||||||||  ||| |||||||  |||| ||||||||| ||||||||||||    
T  9401043 tggctttaaacagggcccccgcaagtgggcagtgggattggtttccttagattagtcgattcttggatcgg 9400973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 571
Target Start/End: Original strand, 19849948 - 19850022
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcggtact 571  Q
    ||||||||||   |||||||||||||||| |||||||||||||| ||   |||| ||| ||||||||||| ||||    
T  19849948 tggctttaaacagggcccccgcaagtgggcggtgagattggtcctctcaaattaatcgattcttggatcgatact 19850022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 478
Target Start/End: Complemental strand, 23787151 - 23787113
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  23787151 tctcaggtttgattccctctggtgccaatttcggtgggc 23787113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 650
Target Start/End: Original strand, 26521166 - 26521219
Alignment:
Q  594 ctttgtatagacaaccacttttttatcatttgatttatgactcgaatcttgaattat 650  Q
    |||||||||||  ||||||||||   |||||||||||||||| ||||||||||||||    
T  26521166 ctttgtatagattaccacttttt---catttgatttatgacttgaatcttgaattat 26521219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 564
Target Start/End: Complemental strand, 27269409 - 27269359
Alignment:
Q  514 cccgcaagtgggtggtgagattggtccccttggattagtcggttcttggat 564  Q
    |||||||||||| |||| ||||| |||||| |||||||||| |||||||||    
T  27269409 cccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggat 27269359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 482
Target Start/End: Original strand, 29698161 - 29698243
Alignment:
Q  400 tggggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagt 482  Q
    ||||||||||||||||||||| |   || | |||||||| ||||| |||  ||| ||||||||| ||||||| ||||||||||    
T  29698161 tggggttggcttgggatcttggaatttgctcctctcaaggtctcaagttttatttcctctggtgtcaatttcggtgggcaagt 29698243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 478
Target Start/End: Original strand, 41314046 - 41314084
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  41314046 tctcaggttcgattccctctggtgtcaatttcggtgggc 41314084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 4060235 - 4060198
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  4060235 ctcaagatctcaggttcgattctctctggtgtcaattt 4060198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 477
Target Start/End: Original strand, 19174817 - 19174854
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtggg 477  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  19174817 tctcaggttcgattccttctggtgccaatttcggtggg 19174854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 22363210 - 22363173
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  22363210 ctcaagatctaaggttcgattccctccggtgccaattt 22363173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 403 - 476
Target Start/End: Original strand, 31536225 - 31536297
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgg 476  Q
    |||||||||||||||||| || | ||| |||| ||  ||||| ||||||| ||||||||||||||||| |||||    
T  31536225 ggttggcttgggatcttggagtgcgttcctcttaaagtctcaagttcgat-ccctctggtgccaattttagtgg 31536297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 34041609 - 34041572
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  34041609 ctcaaggtctcaggtttgattccctctggtgccaattt 34041572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 402 - 454
Target Start/End: Complemental strand, 6099571 - 6099519
Alignment:
Q  402 gggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattc 454  Q
    |||||||||||||| |||| || ||| | |||||||| |||||||||||||||    
T  6099571 gggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattc 6099519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 620 - 656
Target Start/End: Original strand, 34553966 - 34554002
Alignment:
Q  620 catttgatttatgactcgaatcttgaattattttgag 656  Q
    |||||||||||||||| |||| |||||||||||||||    
T  34553966 catttgatttatgactagaattttgaattattttgag 34554002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 5e-30; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 19145591 - 19145424
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgct----aatg 498  Q
    ||||| |||||||||||| ||  || | |||||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||  |||      ||    
T  19145591 ggttgacttgggatcttggagtatgctcctctcaaggtctccggttcgattccctctggtgccaatttcggtgggcaagtccatacagagctttgctctg 19145492  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | |||||||||||||| |||| |||||||||||| |||||||| ||||||||||||||    
T  19145491 gctttaaatg-gtcccccgcaagtgggcggtgggattggtcccctcggattagttggttcttggatcgg 19145424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 27498911 - 27498743
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    ||||||||||| |||||| ||  || | ||||  || |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  27498911 ggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatagcttgctctg 27498812  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  27498811 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 27498743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 32059620 - 32059452
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||  ||| |||||||||||||||| ||||||||||||||| |||||| |||||| ||||  |||     ||    
T  32059620 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggctaagtccatacagagcttgctctg 32059521  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||| |||||||||||| |||||||||||| ||||||||||    
T  32059520 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcgg 32059452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 18207261 - 18207392
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaat---ggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||| ||||  |||  |   ||||||||| |||||||||||||||||| |||| ||||    
T  18207261 tctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttgttctggctttaaacgaggcccccgcaagtgggcggtgggatt 18207360  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| ||||||||||||    
T  18207361 ggtcccctcggattagtcgattcttggatcgg 18207392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 8484841 - 8484673
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || ||||||||| |||||||||||||||||||||| |||||| |||| | ||||  |||     ||    
T  8484841 ggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctg 8484742  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  8484741 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 8484673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 11926645 - 11926513
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggccccc-gcaagtgggtggtgagat 534  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||| | ||||||| |||||||||||||| |||    
T  11926645 tctcaggttagattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggccccccgcaagtgggtggtgggat 11926546  T
Q  535 tggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||| |||||||||| ||||||||||||    
T  11926545 tggtcccctcggattagtcgattcttggatcgg 11926513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 38684262 - 38684392
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||| | |||||||||||||| | |||| ||||    
T  38684262 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacg-ggcccccgcaagtgagcggtgggatt 38684360  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| ||||||||||||    
T  38684361 ggtcccctcggattagtcgattcttggatcgg 38684392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 403 - 561
Target Start/End: Complemental strand, 15641285 - 15641123
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||| ||||||||| |||||| |||||| ||||  |||     ||    
T  15641285 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctg 15641186  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttg 561  Q
    |||||||| | |||||||||||||||| |||| |||||||||||| |||||||||| ||||||    
T  15641185 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 15641123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 389 - 567
Target Start/End: Complemental strand, 19456403 - 19456223
Alignment:
Q  389 tgaatcccatctggggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgta 487  Q
    |||| ||||| ||||||||||||||||||||| ||  || | |||   || ||||||||||||| |||||||||||||||||| |||||| |||||| ||    
T  19456403 tgaaacccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgat-ccctctggtgccaatttcggtgggctaagtccata 19456305  T
Q  488 caatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||  |||     |||||||||| | |||||| ||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  19456304 cagagcttgctctggctttaaacggggcccc-gcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 19456223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 445 - 566
Target Start/End: Complemental strand, 26009402 - 26009277
Alignment:
Q  445 ggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagattggtcc 540  Q
    ||||||||||||| |||||||||||||||||||| |||||| | ||  ||| |   |||||||||| | ||||||||||||||||| ||| |||| ||||    
T  26009402 ggttcgattccctttggtgccaatttcagtgggctaagtccatgcagagcttactctggctttaaacggggcccccgcaagtgggtagtgggattagtcc 26009303  T
Q  541 ccttggattagtcggttcttggatcg 566  Q
    ||| ||||||||||||||||| ||||    
T  26009302 cctcggattagtcggttcttgaatcg 26009277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 4603794 - 4603962
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||  ||||||||| |||||||||| |||||||||||||||  ||||| |||||| ||||  |||     ||    
T  4603794 ggttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattccttctggtgccaatttcgatgggctaagtccatacagagctcgctctg 4603893  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||| ||||||||  |||| |||||||||||| |||||||||||| ||||||||||    
T  4603894 gctttaaacggggcccctgcaagtggacggtgggattggtcccctcggattagtcggtccttggatcgg 4603962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 10869647 - 10869577
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||| |||||||||||||||||||||||    
T  10869647 tggctttaaatggggcctccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcgg 10869577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 30485882 - 30486013
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||||||||| |||||||| ||||||| |||||| |||||| ||||  |||     |||||||||| || ||||||||||||||| |||| ||||    
T  30485882 tctcaggttcgattcactctggtgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacgatgcccccgcaagtgggcggtgggatt 30485981  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||  ||||||||||||    
T  30485982 ggtcccctcggattagtcaattcttggatcgg 30486013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 33709681 - 33709515
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatg--ctaatgg 499  Q
    |||||||||||||||||| ||  || | |||   || ||||| |||||||||||||||||||||||||| |||||| |||||| ||||  |  ||  |||    
T  33709681 ggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctaagtccatacagagagctc-tgg 33709583  T
Q  500 ctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||| | | ||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  33709582 ctttaaacgggacccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 33709515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 13038597 - 13038467
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgcta--atggctttaaatgaggcccccgcaagtgggtggtgagattg 536  Q
    |||||||||||||||||||||||||||||||   ||||| |||| | ||||  || |  ||||||||||| | |||||||||||||||| |||| |||||    
T  13038597 tctcaggttcgattccctctggtgccaattttgatgggctaagttcatacagagcaagtatggctttaaacggggcccccgcaagtgggcggtgggattg 13038498  T
Q  537 gtccccttggattagtcggttcttggatcgg 567  Q
     |||||| | |||||||| ||||||||||||    
T  13038497 atcccctcgaattagtcgattcttggatcgg 13038467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 403 - 563
Target Start/End: Complemental strand, 31288126 - 31287962
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||  ||| ||||| |||||||||||| ||||||||||||| |||||  |||||| ||||| |||     ||    
T  31288126 ggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttggtgccaatttcggtgggttaagtccatacaaagcttgctttg 31288027  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttgga 563  Q
     ||||||| | |||||||||||||||| |||| |||||||| ||| | |||||||||||||||||    
T  31288026 actttaaacggggcccccgcaagtgggcggtgggattggtctcctcgaattagtcggttcttgga 31287962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 11465050 - 11464920
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||| ||||||||||||||||  |||||| |||| | ||||  ||| |   |||||||||| | |||||| |||||||||||||| ||||    
T  11465050 tctcaggttcgatttcctctggtgccaattttggtgggctaagttcatacagagcttactctggctttaaacggggcccc-gcaagtgggtggtgggatt 11464952  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||| ||||||||||||    
T  11464951 ggtcccctcgaattagtcgattcttggatcgg 11464920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 405 - 567
Target Start/End: Complemental strand, 6014458 - 6014292
Alignment:
Q  405 ttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggc 500  Q
    |||||||||||||||| ||  || |||||   ||||||||||||||||| | ||||||||||||||| |||||  |||||| ||||  |||     ||||    
T  6014458 ttggcttgggatcttggagtttgcttctccagagatctcaggttcgattacttctggtgccaatttcggtgggttaagtccatacagagcttgctctggc 6014359  T
Q  501 tttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||| | || || |||||||||| ||||||||| ||||||| | |||||||| ||||||||||||    
T  6014358 tttaaacggggtccacgcaagtgggcggtgagattagtcccctcgaattagtcgattcttggatcgg 6014292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 13108629 - 13108462
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaat--gg 499  Q
    |||||||||||||||||| ||  || | |||   ||||||||||||||||||||||||||||||||||   ||||| |||| | ||||  || | |  |     
T  13108629 ggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaattttgatgggctaagttcatacagagcaagtctgc 13108530  T
Q  500 ctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||| | |||||||||||||||| |||| ||||| |||||| | |||||||| ||||||||||||    
T  13108529 ctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcgg 13108462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 402 - 560
Target Start/End: Complemental strand, 15485472 - 15485310
Alignment:
Q  402 gggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---- 496  Q
    |||||||||||||| |||| || ||| | |||||||| ||||||||||||||||| |||   |||||||| |||||  |||||| |||||  |||         
T  15485472 gggttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattccc-ctgacaccaatttcggtgggttaagtccatacaaaactatgttc 15485374  T
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttctt 560  Q
    |||||||||||| || |||||||||||| ||||| |||||| ||||| ||||||||||| ||||    
T  15485373 tggctttaaatggggtccccgcaagtggatggtgggattggacccctcggattagtcggctctt 15485310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 501 - 567
Target Start/End: Original strand, 22693054 - 22693120
Alignment:
Q  501 tttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||| | |||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  22693054 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 22693120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 497 - 567
Target Start/End: Original strand, 35425128 - 35425198
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | |||||||||||||||| |||| ||||||||| || |||||||||| ||||||||||||    
T  35425128 tggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggattagtcgattcttggatcgg 35425198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 394 - 564
Target Start/End: Complemental strand, 12398637 - 12398463
Alignment:
Q  394 cccatctggggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatg 492  Q
    ||||| ||||||||||||||||||||| ||  || | |||  ||| |||||||||||||||||| ||||| ||||||| |||| | |||| | ||||  |    
T  12398637 cccatttggggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgtcaatttcggtggcctaagttcatacagag 12398538  T
Q  493 ct---aatggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggat 564  Q
    ||     |||||||||||| ||||||||||| |||  |||||||||| ||| ||   ||||||||||||||||||    
T  12398537 cttgctctggctttaaatggggcccccgcaaatggacggtgagattgatcctctcaaattagtcggttcttggat 12398463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 408 - 490
Target Start/End: Original strand, 36895447 - 36895529
Alignment:
Q  408 gcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaa 490  Q
    ||||||||||||| || ||| | |||||||| | ||| ||||||||||||||||| |||||||| |||| ||||||| |||||    
T  36895447 gcttgggatcttggagtgtgctcctctcaaggtttcatgttcgattccctctggtaccaatttcggtggtcaagtccatacaa 36895529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 509 - 567
Target Start/End: Complemental strand, 38631049 - 38630991
Alignment:
Q  509 aggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||||||||| |||| |||||||||||| |||||| ||| ||||||||||||    
T  38631049 aggcccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcgg 38630991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 7085769 - 7085638
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||| ||||||||||||||| ||| ||||||| |||||| |||||| ||||  |||     || ||||||| | || ||||||||||||| |||| ||||    
T  7085769 tctccggttcgattccctctagtgtcaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggtccccgcaagtgggcggtgggatt 7085670  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| |||||| |||||    
T  7085669 ggtcccctcggattagtcgattcttgaatcgg 7085638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 567
Target Start/End: Original strand, 37495186 - 37495239
Alignment:
Q  514 cccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  37495186 cccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 37495239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 662
Target Start/End: Original strand, 39646430 - 39646499
Alignment:
Q  594 ctttgtatagacaaccactttt-ttatcatttgatttatgactcgaatcttgaattattttgagattagt 662  Q
    |||||||||| || |||||||| ||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  39646430 ctttgtatagccagccactttttttatcatttgatttaagacttcaatcttgaatcattttgagattagt 39646499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 407 - 470
Target Start/End: Original strand, 31074260 - 31074324
Alignment:
Q  407 ggcttgggatcttgaagcgtgtttctc-tcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||||||| ||| || ||||| ||| ||||||||||||||||||||| |||||||||||||||    
T  31074260 ggcttgggattttggagtgtgttcctcctcaagatctcaggttcgattctctctggtgccaattt 31074324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 567
Target Start/End: Complemental strand, 41351168 - 41351116
Alignment:
Q  515 ccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  41351168 ccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 41351116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 567
Target Start/End: Original strand, 5067392 - 5067446
Alignment:
Q  513 ccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||||| |||| ||||||||||||  ||||||||| ||||||||||||    
T  5067392 ccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatcgg 5067446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 567
Target Start/End: Complemental strand, 21377311 - 21377261
Alignment:
Q  517 gcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||||||||||||||| | ||||||||||||||  |||||||||    
T  21377311 gcaagtgggtggtgagattggtctctttggattagtcggtctttggatcgg 21377261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 497 - 567
Target Start/End: Original strand, 22392803 - 22392873
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | |||||||||||||||| ||||  |||||||||||  ||||||||| || |||||||||    
T  22392803 tggctttaaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcgg 22392873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 567
Target Start/End: Complemental strand, 27487616 - 27487566
Alignment:
Q  517 gcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  27487616 gcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 27487566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 489
Target Start/End: Original strand, 15931113 - 15931162
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    |||||||||||||||||||||||||||||||| ||||  |||||| ||||    
T  15931113 tctcaggttcgattccctctggtgccaatttcggtggctaagtccataca 15931162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 34310196 - 34310327
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||  |||||| |||||| ||||  |||     |||||||||| | | |||||  ||||||  |||| ||||    
T  34310196 tctcaggttcgattccctctggtgccaattttggtgggctaagtccatacagagcttgctctggctttaaacgggacccccataagtggacggtgggatt 34310295  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||| ||| ||||||||||||    
T  34310296 ggtcccctcgaattaatcgattcttggatcgg 34310327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 497 - 564
Target Start/End: Complemental strand, 9659393 - 9659326
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggat 564  Q
    |||||||||||| | |||||||||||||  |||| |||||||||| | |||||||| | |||||||||    
T  9659393 tggctttaaatgggccccccgcaagtggacggtgggattggtcccttcggattagttgattcttggat 9659326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 567
Target Start/End: Complemental strand, 13659312 - 13659257
Alignment:
Q  512 cccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||||||| |||| ||||| |||||| |||||| ||| ||||||||||||    
T  13659312 cccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcgg 13659257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 567
Target Start/End: Complemental strand, 21236441 - 21236374
Alignment:
Q  500 ctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||| | |||||||||||||||| |||| |||| |||||||  ||||||||| |||||| |||||    
T  21236441 ctttaaacggggcccccgcaagtgggcggtgggattagtcccctcagattagtcgattcttgaatcgg 21236374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 478
Target Start/End: Original strand, 25586949 - 25587024
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||| ||||||||||||||||| ||||||    
T  25586949 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggc 25587024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 470
Target Start/End: Complemental strand, 38990651 - 38990600
Alignment:
Q  419 tgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    ||||| |||||||||||||||||||| ||||||||| ||| |||| ||||||    
T  38990651 tgaagtgtgtttctctcaagatctcatgttcgattctctccggtgtcaattt 38990600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 470
Target Start/End: Original strand, 21589350 - 21589380
Alignment:
Q  440 tctcaggttcgattccctctggtgccaattt 470  Q
    |||||||||||||||||||||||||||||||    
T  21589350 tctcaggttcgattccctctggtgccaattt 21589380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 567
Target Start/End: Complemental strand, 24158228 - 24158178
Alignment:
Q  517 gcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||| |||||||||||||||||  ||||||||||| |||| |||||    
T  24158228 gcaagtgggcggtgagattggtcccctcagattagtcggtccttgaatcgg 24158178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 470
Target Start/End: Original strand, 37495101 - 37495131
Alignment:
Q  440 tctcaggttcgattccctctggtgccaattt 470  Q
    |||||||||||||||||||||||||||||||    
T  37495101 tctcaggttcgattccctctggtgccaattt 37495131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 565
Target Start/End: Original strand, 42193539 - 42193666
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa----tgctaatggctttaaatgaggcccccgcaagtgggtggtgagat 534  Q
    |||||||||||||| |||||| |||||||||| |||||| |||||  ||||     ||||  ||||||||||||  | ||||||||||||| |||| | |    
T  42193539 tctcaggttcgatttcctctgatgccaatttcggtgggctaagtctatacagagtttgctt-tggctttaaatg--gaccccgcaagtgggcggtggggt 42193635  T
Q  535 tggtccccttggattagtcggttcttggatc 565  Q
    |||||| || |||||||||| ||||||||||    
T  42193636 tggtcctctcggattagtcgattcttggatc 42193666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Original strand, 14285216 - 14285253
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  14285216 ctcaaggtctcaggttcgattctctctggtgccaattt 14285253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 477
Target Start/End: Complemental strand, 17015556 - 17015519
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtggg 477  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  17015556 tctcaggtttgattccctctggtgccaatttcattggg 17015519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 567
Target Start/End: Complemental strand, 25750674 - 25750625
Alignment:
Q  518 caagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| ||||||||||||||| |  ||||||||| ||||||||||||    
T  25750674 caagtggggggtgagattggtcccttcagattagtcgattcttggatcgg 25750625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 511 - 567
Target Start/End: Complemental strand, 930554 - 930498
Alignment:
Q  511 gcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||| |||||||||   ||| |||||||||||| |||||||||||| ||||||||||    
T  930554 gccctcgcaagtggacagtgtgattggtcccctcggattagtcggtccttggatcgg 930498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 513 - 561
Target Start/End: Complemental strand, 10813917 - 10813869
Alignment:
Q  513 ccccgcaagtgggtggtgagattggtccccttggattagtcggttcttg 561  Q
    |||| ||||| ||||||| |||| ||||||||||||||||| |||||||    
T  10813917 ccccacaagtaggtggtgggatttgtccccttggattagtcagttcttg 10813869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 21835172 - 21835340
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  21835172 ggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 21835271  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  21835272 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 21835340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 2751292 - 2751460
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||  ||| |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  2751292 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 2751391  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | ||||||||||| |||| |||| |||||||||||| |||||||||| ||||||||||||    
T  2751392 gctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcgg 2751460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 22119909 - 22120077
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  22119909 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 22120008  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  22120009 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 22120077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 40543090 - 40542922
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  40543090 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 40542991  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  40542990 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 40542922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 654847 - 654717
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||| | |||||||||||||||| |||| ||||    
T  654847 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacg-ggcccccgcaagtgggcggtgggatt 654749  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||||||||||||||||    
T  654748 ggtcccctcggattagtcggttcttggatcgg 654717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 7275298 - 7275466
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  7275298 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 7275397  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||   |||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  7275398 gctttaaacagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 7275466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 7176042 - 7175874
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  7176042 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 7175943  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||   | |||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  7175942 gctttaaacaggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 7175874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 11997870 - 11998038
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | ||||  || |||||||||||||||||||||||||||||||| || ||| |||||| ||||  |||     ||    
T  11997870 ggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggttggctaagtccatacatagcttgctctg 11997969  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||   |||||||||||||||| |||| |||||||||||| | |||||||| ||||||||||||    
T  11997970 gctttaaactgggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcgg 11998038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 22703507 - 22703675
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||| ||||||| |||||| |||||| ||||| |||     ||    
T  22703507 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagcttgctctg 22703606  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | | |||||||||||||| |||| |||||||||||| |||||||||| ||||| ||||||    
T  22703607 gctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattctttgatcgg 22703675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 409 - 483
Target Start/End: Original strand, 28646996 - 28647070
Alignment:
Q  409 cttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtc 483  Q
    |||||||||||| || ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  28646996 cttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccctctggtgccaatttcggtgggcaagtc 28647070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 41907656 - 41907526
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa----tgctaatggctttaaatgaggcccccgcaagtgggtggtgagat 534  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||| ||||     ||||  |||||||||| | ||||||||||||||||||||| |||    
T  41907656 tctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagaggttgctc-tggctttaaacgtggcccccgcaagtgggtggtgggat 41907558  T
Q  535 tggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||   ||||||||| ||||||||||||    
T  41907557 tggtcccc-cagattagtcgattcttggatcgg 41907526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 17197093 - 17196962
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||| |||||||||||||||||||||||||| ||| || |||||| ||||  |||     |||||||||| | |||||||||||||||| |||| ||||    
T  17197093 tctcaagttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggatt 17196994  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||| ||||||||||||    
T  17196993 ggtcccctcgaattagtcgattcttggatcgg 17196962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 403 - 561
Target Start/End: Original strand, 10091209 - 10091371
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||| ||||||||| |||||| |||||| ||||  |||     ||    
T  10091209 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctg 10091308  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttg 561  Q
    |||||||||| || ||||||||||||| |||| ||||| |||||| |||||||||| ||||||    
T  10091309 gctttaaatggggtccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttg 10091371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 28089874 - 28090008
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa--------tgctaatggctttaaatgaggcccccgcaagtgggtggtg 530  Q
    ||||||||||||| |||||||||| ||||||| |||||| |||||| |||||        ||||  |||||||||||| |||||||||||||||| | ||    
T  28089874 tctcaggttcgataccctctggtgtcaatttcggtgggctaagtccatacaaagtgagcttgctc-tggctttaaatg-ggcccccgcaagtgggcgatg 28089971  T
Q  531 agattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  28089972 agattggtcccctcggattagtcgattcttggatcgg 28090008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 29861728 - 29861859
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtaca----atgctaatggctttaaatgaggcccccgcaagtgggtggtgagat 534  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||     ||||  |||||||||| | |||||||||||||||| |||| |||    
T  29861728 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagaacttgct-ctggctttaaacggggcccccgcaagtgggcggtgggat 29861826  T
Q  535 tggtccccttggattagtcggttcttggatcgg 567  Q
    || |||||| | |||||||| ||||| ||||||    
T  29861827 tgatcccctcgaattagtcgattcttagatcgg 29861859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 2344320 - 2344488
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaat---g 498  Q
    |||||||||||||||||| ||  || | |||  ||| |||||| ||||||||| ||||||||||||||  |||||| |||||| ||||  |||  |   |    
T  2344320 ggttggcttgggatcttggagtttgctcctccaaagctctcagattcgattccttctggtgccaattttggtgggctaagtccatacagagctttttttg 2344419  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | | |||||||||||| | |||| |||||||||||| |||||||||||| ||||||||||    
T  2344420 gctttaaacgggacccccgcaagtgagcggtgggattggtcccctcggattagtcggtccttggatcgg 2344488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 443 - 567
Target Start/End: Original strand, 18044168 - 18044296
Alignment:
Q  443 caggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagattggt 538  Q
    ||||||||||||||||| ||||||||||| |||||| |||||| ||||  |||     |||||||||| | ||||||| |||||||||||||  ||||||    
T  18044168 caggttcgattccctcttgtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtgggtggtggaattggt 18044267  T
Q  539 ccccttggattagtcggttcttggatcgg 567  Q
    |||||  ||||||||| ||||||||||||    
T  18044268 cccctcagattagtcgattcttggatcgg 18044296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 403 - 554
Target Start/End: Original strand, 2103076 - 2103230
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||| ||||||||| |||||| |||||| ||||  |||     ||    
T  2103076 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctg 2103175  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcg 554  Q
    |||||||||| |||||||||||||||| |||| ||||||| |||| ||||||||||    
T  2103176 gctttaaatggggcccccgcaagtgggcggtgggattggt-ccctcggattagtcg 2103230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 16374052 - 16374183
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa----tgctaatggctttaaatgaggcccccgcaagtgggtggtgagat 534  Q
    |||||| ||||||||||||||||||||||||| |||||  |||||| ||||     ||||| |||||||||| | | ||||||||| |||  |||| |||    
T  16374052 tctcagattcgattccctctggtgccaatttcggtgggttaagtccatacagaatttgcta-tggctttaaacgggacccccgcaaatggacggtgggat 16374150  T
Q  535 tggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||| |||||||||| ||||||||||||    
T  16374151 tggtcccctcggattagtcgattcttggatcgg 16374183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 497 - 567
Target Start/End: Original strand, 3851876 - 3851946
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | |||||||||||||||| |||| ||||| |||||| |||||||||| ||||||||||||    
T  3851876 tggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcgg 3851946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 403 - 489
Target Start/End: Complemental strand, 12211715 - 12211629
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    ||||||||| |||||||| || ||| | |||||||||||||||||| |||| |||||||||||||||||  ||| ||||||| ||||    
T  12211715 ggttggcttaggatcttggagtgtgctcctctcaagatctcaggtttgatttcctctggtgccaatttcgatggacaagtccataca 12211629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 403 - 489
Target Start/End: Complemental strand, 23330919 - 23330833
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    |||||||||||||| ||  || ||| | |||||||| |||||||||||| |||||| |||||||||||| |||||||||||| ||||    
T  23330919 ggttggcttgggattttagagtgtgctcctctcaaggtctcaggttcgactccctccggtgccaatttcggtgggcaagtccataca 23330833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 27312173 - 27312341
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | ||||  || | |||||||||||||||||| |||||||||||  || || |||||| ||||  ||||    ||    
T  27312173 ggttggcttgggatcttggagtttgctcctctagaggtttcaggttcgattccctctagtgccaatttcgatgtgccaagtccatacagagctacctctg 27312272  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
     ||||||| |  ||||||||||||||| |||| ||||||||||||  ||||||||| ||||||||||||    
T  27312273 actttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcgg 27312341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 43785479 - 43785311
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||  ||  || | |||  ||| ||||| ||||||||||| || |||| ||||||||||| | |||||| ||||  ||| |   ||    
T  43785479 ggttggcttgggatctttgagattgctcctccaaaggtctcaagttcgattcccacttgtgctaatttcagtggactaagtccatacagagcttactctg 43785380  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    | |||||| | |||| ||||||||||  |||||||||||||||||||||||||||| || |||||||||    
T  43785379 gttttaaacggggcctccgcaagtggacggtgagattggtccccttggattagtcgatttttggatcgg 43785311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 21574283 - 21574114
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccc-tctggtgccaatttcagtgggcaagtccgtacaatgctaat---- 497  Q
    |||||| ||||||| ||| || ||| | |||||||| || |||||||||||||| | ||||||||| ||| |||||||||||| ||||  |||           
T  21574283 ggttggtttgggattttggagtgtgctcctctcaaggtcacaggttcgattcccctttggtgccaacttcggtgggcaagtccatacagagctttgccca 21574184  T
Q  498 ggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||  || | ||||||| ||||| || ||||||||||||||||| |||||||||||| ||||||||||    
T  21574183 ggcttagaacggggcccccacaagtaggcggtgagattggtcccctcggattagtcggtccttggatcgg 21574114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 403 - 553
Target Start/End: Complemental strand, 23012688 - 23012534
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || |||||   || ||| ||||| |||||||||| ||||||||||| |||||| |||||| ||||  |||     ||    
T  23012688 ggttggcttgggatcttggagtttgcttctccagaggtcttaggtttgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctg 23012589  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtc 553  Q
    |||||||||| ||||||| |||||||| |||| |||||||||||| | |||||||    
T  23012588 gctttaaatggggcccccacaagtgggcggtgggattggtcccctcgtattagtc 23012534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 403 - 490
Target Start/End: Complemental strand, 8435875 - 8435788
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaa 490  Q
    ||||| |||||||||||| ||  || | || | ||||||| |||||||||| ||||||||||||||||| |||||||||||| |||||    
T  8435875 ggttgacttgggatcttggagtttgctcctttgaagatcttaggttcgatttcctctggtgccaatttcggtgggcaagtccatacaa 8435788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 512 - 567
Target Start/End: Complemental strand, 8943468 - 8943413
Alignment:
Q  512 cccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||||||| |||| |||||||||||||| |||||||| ||||||||||||    
T  8943468 cccccgcaagtgggcggtgtgattggtccccttgaattagtcgattcttggatcgg 8943413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 22696348 - 22696415
Alignment:
Q  410 ttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtggg 477  Q
    ||||||||||| || ||| | |||||||| ||||||||| |||||||||||||||||||||| |||||    
T  22696348 ttgggatcttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtggg 22696415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 403 - 477
Target Start/End: Complemental strand, 7800012 - 7799938
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtggg 477  Q
    |||||||||||||||||| ||  || | |||   || ||||||||||||||||||||||||||||||||||||||    
T  7800012 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtggg 7799938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 403 - 565
Target Start/End: Original strand, 17212074 - 17212240
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa----tgctaat 497  Q
    |||||||||||||||||| ||  || | |||   || |||||||||| |||| |||||||||||||||| |||||| |||||| ||||     ||||  |    
T  17212074 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattctctctggtgccaatttcggtgggctaagtccatacagagattgctc-t 17212172  T
Q  498 ggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatc 565  Q
    ||||| ||| | | |||| ||||||| |||||| |||||||||||| |||||||||| ||||||||||    
T  17212173 ggcttaaaacgggacccctgcaagtgagtggtgggattggtcccctcggattagtcgattcttggatc 17212240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 21218013 - 21217845
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatg 498  Q
    |||||||||||||||||| ||  || | |||   || ||||||||||||||||||||| |||||||||| |||||| |||||| ||||  |||     |     
T  21218013 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagcttgctcta 21217914  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | | ||||| |||||||| |||| ||||| |||||| |||||||| | ||||||||||||    
T  21217913 gctttaaacgggccccccacaagtgggcggtgggattgatcccctcggattagttgattcttggatcgg 21217845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 453 - 567
Target Start/End: Original strand, 23092167 - 23092285
Alignment:
Q  453 tccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggat 548  Q
    ||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||| | ||||||||||| |||  |||| |||||||||||| ||||    
T  23092167 tccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggat 23092266  T
Q  549 tagtcggttcttggatcgg 567  Q
    |||||| ||| ||||||||    
T  23092267 tagtcgattcatggatcgg 23092285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 499 - 567
Target Start/End: Original strand, 31197711 - 31197779
Alignment:
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||  |||| ||||||||||||  ||||||||| ||||||||||||    
T  31197711 gctttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcgg 31197779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 512 - 567
Target Start/End: Original strand, 25333537 - 25333592
Alignment:
Q  512 cccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||||||  ||| |||||||||||| |||||||||| ||||||||||||    
T  25333537 cccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttggatcgg 25333592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 440 - 561
Target Start/End: Original strand, 27704060 - 27704184
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||| ||| ||||||||||||| |||||| |||||| || |  |||     |||||||||||| | ||||||||||||||||||| ||||    
T  27704060 tctcaggttcgatttcctttggtgccaatttcggtgggctaagtccatagagagcttgctttggctttaaatg-gacccccgcaagtgggtggtgtgatt 27704158  T
Q  536 ggtccccttggattagtcggttcttg 561  Q
    | ||||||  ||||||||| ||||||    
T  27704159 gatcccctcagattagtcgattcttg 27704184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 567
Target Start/End: Complemental strand, 31712965 - 31712914
Alignment:
Q  516 cgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  31712965 cgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 31712914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 42913595 - 42913525
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | |||||||||||||||  |||| |||||||||||| |||||||| | ||||| ||||||    
T  42913595 tggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagttgattcttagatcgg 42913525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 432 - 489
Target Start/End: Original strand, 36173085 - 36173142
Alignment:
Q  432 tctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    ||||||| | |||||||||||||||||| ||||||||||  |||||||||||| ||||    
T  36173085 tctcaaggtttcaggttcgattccctcttgtgccaattttggtgggcaagtccataca 36173142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 22638350 - 22638477
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaatggctttaaatgaggcccccgcaagtgggtggtgagattggt 538  Q
    ||||||||||||||||||||||||| |||||| |||||  |||| |  |   ||||  |||||||||| | |||| ||||||||||| |||| ||||| |    
T  22638350 tctcaggttcgattccctctggtgctaatttcggtgggttaagttcagagcttgctc-tggctttaaacggggcctccgcaagtgggcggtgggattgat 22638448  T
Q  539 ccccttggattagtcggttcttggatcgg 567  Q
    | ||| | |||||||| ||||||||||||    
T  22638449 ctcctcgaattagtcgattcttggatcgg 22638477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 478
Target Start/End: Original strand, 22299870 - 22299945
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||||||||||||||||| ||  || | |||   || ||||| |||||||||||||||||||||||||| ||||||    
T  22299870 ggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggc 22299945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 490
Target Start/End: Original strand, 42814922 - 42814973
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa 490  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||| |||||    
T  42814922 tctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacaa 42814973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 478
Target Start/End: Original strand, 27009417 - 27009455
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  27009417 tctcaggttcgatcccctctggtgccaatttcggtgggc 27009455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 478
Target Start/End: Original strand, 28950929 - 28950967
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  28950929 tctcaggttcgactccctctggtgccaatttcggtgggc 28950967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 497 - 554
Target Start/End: Original strand, 21373829 - 21373886
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcg 554  Q
    |||||||||| | |||||||||||||||  |||||||||||||| |  ||||||||||    
T  21373829 tggctttaaacggggcccccgcaagtggacggtgagattggtcctcacggattagtcg 21373886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Original strand, 21558183 - 21558220
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  21558183 ctcaaggtctcaggttcgattctctctggtgccaattt 21558220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 26459431 - 26459394
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  26459431 ctcaaggtctcaggttcgattctctctggtgccaattt 26459394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 33181231 - 33181194
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  33181231 ctcaagatctcaggttcgattccctctagtgtcaattt 33181194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 611 - 656
Target Start/End: Complemental strand, 48433420 - 48433375
Alignment:
Q  611 cttttttatcatttgatttatgactcgaatcttgaattattttgag 656  Q
    ||||||| ||||||||||| ||||| |||||||||||| |||||||    
T  48433420 cttttttgtcatttgatttttgacttgaatcttgaattcttttgag 48433375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 614 - 654
Target Start/End: Complemental strand, 12270324 - 12270284
Alignment:
Q  614 ttttatcatttgatttatgactcgaatcttgaattattttg 654  Q
    |||| |||||||||||||| || ||||||||||||||||||    
T  12270324 ttttgtcatttgatttatggcttgaatcttgaattattttg 12270284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 515 - 563
Target Start/End: Original strand, 31274050 - 31274098
Alignment:
Q  515 ccgcaagtgggtggtgagattggtccccttggattagtcggttcttgga 563  Q
    |||||||||||  |||||||||||||||| | |||||||| ||||||||    
T  31274050 ccgcaagtgggcagtgagattggtcccctcgaattagtcgattcttgga 31274098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 499 - 567
Target Start/End: Complemental strand, 33137904 - 33137837
Alignment:
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| |||||  ||||||||| ||||| ||||||||||| | |||||||| ||||| ||||||    
T  33137904 gctttaaatggggccct-gcaagtgggcggtgaaattggtcccctcgaattagtcgattcttagatcgg 33137837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 2e-29; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 46576365 - 46576533
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || ||||||||||||||||||||||||||||||||||||||| |||||| ||||  |||     ||    
T  46576365 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctg 46576464  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||  ||||||||||||||||||||||| ||||||||||||    
T  46576465 gctttaaacggggcccccgcaagtgggcggtcggattggtccccttggattagtcgattcttggatcgg 46576533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 403 - 564
Target Start/End: Original strand, 35492928 - 35493093
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  35492928 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 35493027  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggat 564  Q
    |||||||| | |||||||||||||||| |||| |||||||||||| |||||||||| |||||||||    
T  35493028 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggat 35493093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 26174130 - 26174298
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||| ||||||||||||||||| |||||  |||||| ||||  |||     ||    
T  26174130 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttcctctggtgccaatttcggtgggttaagtccatacagagcttgctctg 26174229  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||  |||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  26174230 gctttaaatagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 26174298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 30257641 - 30257809
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||  ||| |||||||||||||||||| |||||||||||||  ||| | |||||| ||||  |||     ||    
T  30257641 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgatggactaagtccatacagagcttgctctg 30257740  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| |||||||||||||||| ||||  ||||||||||| |||||||||| ||||||||||||    
T  30257741 gctttaaatggggcccccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcgg 30257809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 40133629 - 40133461
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||| ||| ||  || | |||  ||| |||||||||||||||||||||||| ||||||| |||||| |||||| ||||  |||     ||    
T  40133629 ggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctg 40133530  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||| |||||||||||| | |||||||| ||||||||||||    
T  40133529 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcgg 40133461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 49258442 - 49258274
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||| ||||||||||| |||||| |||||| ||||  |||     ||    
T  49258442 ggttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctg 49258343  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | ||||||| |||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  49258342 gctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 49258274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 8456293 - 8456162
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||| | ||||||||||||||||  ||| ||||    
T  8456293 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcagtgggatt 8456194  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| |||||| |||||    
T  8456193 ggtcccctcggattagtcgattcttgaatcgg 8456162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 404 - 567
Target Start/End: Original strand, 26158836 - 26158996
Alignment:
Q  404 gttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgctaatggcttt 503  Q
    ||||||||| ||||||| || ||| | |||||||| |||||||||  ||||||| ||||||||||||| ||||| |||||| ||||  |||  ||||||     
T  26158836 gttggcttgagatcttggagtgtgctcctctcaaggtctcaggtttcattccctttggtgccaatttcggtgggtaagtccataca--gct-ctggctta 26158932  T
Q  504 aaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
     || |  ||||||||||||||| |||| ||||| |||||| |||||||||||| ||||||||||    
T  26158933 gaacggagcccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcgg 26158996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 53424356 - 53424189
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa----tgctaat 497  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||| ||||||||||||| |||||| |||||| ||||     ||||| |    
T  53424356 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgggctaagtccatacagagtttgcta-t 53424258  T
Q  498 ggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||| | |||||||||||||| | |||| |||||||||||| |||||||||| ||||||||||||    
T  53424257 ggctttaaacg-ggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcgg 53424189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 567
Target Start/End: Complemental strand, 10190931 - 10190754
Alignment:
Q  394 cccatctggggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatg 492  Q
    ||||| ||||||||||||||||||||| ||  || | |||   ||  |||||||| |||||||||| ||||||||||| |||||| |||||| ||||  |    
T  10190931 cccatttggggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagag 10190832  T
Q  493 ctaa---tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||     |||||||||| | |||||||||||||||  |||| |||||||||||| |||||||||| ||||||||||||    
T  10190831 cttgctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcgg 10190754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 442 - 567
Target Start/End: Complemental strand, 18177028 - 18176899
Alignment:
Q  442 tcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagattgg 537  Q
    |||||||||||||||||||||||||||||| |||| | |||||| ||||  |||     |||||||||| | |||||||||||||||| |||| ||||||    
T  18177028 tcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggattgg 18176929  T
Q  538 tccccttggattagtcggttcttggatcgg 567  Q
    |||| | |||||||||| ||||||||||||    
T  18176928 tcccatcggattagtcgattcttggatcgg 18176899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 441 - 567
Target Start/End: Complemental strand, 8097421 - 8097291
Alignment:
Q  441 ctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtaca----atgctaatggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||||||||||||| |||| ||||||  ||||| |||||| ||||    |||||  |||||||||| | |||||||||||||||| |||| ||||    
T  8097421 ctcaggttcgattccctcttgtgctaatttcgatgggctaagtccatacagagcatgctc-tggctttaaacggggcccccgcaagtgggcggtgggatt 8097323  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| ||||||||||||    
T  8097322 ggtcccctcggattagtcgattcttggatcgg 8097291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 48977405 - 48977573
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    ||||| |||||||||||| ||  || | |||  ||| |||||||||||||||| ||||||||||||||| |||||  |||||| ||||  |||     ||    
T  48977405 ggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgggttaagtccatacagagcttgctctg 48977504  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||| ||||||||| |||| |||||||||||| |||||||||||| ||||||||||    
T  48977505 gctttaaacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcgg 48977573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 15566642 - 15566512
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||| ||||  |||     |||||||||| | |||||||||||||||| |||| ||||    
T  15566642 tctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacg-ggcccccgcaagtgggcggtgggatt 15566544  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||  ||||||||| ||||||||||||    
T  15566543 ggtcccctcagattagtcgattcttggatcgg 15566512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 39041995 - 39041864
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||| ||||||||| |||||||||||||||| |||||| |||||| | ||  |||     |||||||||| | ||||||||||||||||||||| ||||    
T  39041995 tctcaagttcgattctctctggtgccaatttcggtgggctaagtccatgcagagcttgctctggctttaaacggggcccccgcaagtgggtggtgggatt 39041896  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    ||||| || |||||||||| ||||||||||||    
T  39041895 ggtccactcggattagtcgattcttggatcgg 39041864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 394 - 567
Target Start/End: Complemental strand, 10084008 - 10083831
Alignment:
Q  394 cccatctggggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatg 492  Q
    ||||| ||||||||||||||||||||| ||  || | |||   ||  |||||||| |||||||||| ||||||||||| |||||| |||||| ||||  |    
T  10084008 cccatttggggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccctctagtgccaatttcggtgggctaagtccatacagag 10083909  T
Q  493 ctaa---tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||     |||||||||| | ||||||| |||||||  |||| |||||||||||| |||||||||| ||||||||||||    
T  10083908 cttgctctggctttaaacggggcccccacaagtggacggtgggattggtcccctcggattagtcgattcttggatcgg 10083831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 440 - 561
Target Start/End: Complemental strand, 53234053 - 53233928
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||| ||||  |||     ||||| |||| | |||||||||||||||| |||| ||||    
T  53234053 tctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctctaaacggggcccccgcaagtgggcggtgggatt 53233954  T
Q  536 ggtccccttggattagtcggttcttg 561  Q
    |||||||| |||||||||| ||||||    
T  53233953 ggtcccctcggattagtcgattcttg 53233928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 25289894 - 25289727
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||| ||||||||||| |||||| |||||| ||||  |||     ||    
T  25289894 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctg 25289795  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||| ||||||| |||| | |||||||| ||||||||||||    
T  25289794 gctttaaacggggcccccgcaagtgggcggtgggattggt-ccctcgaattagtcgattcttggatcgg 25289727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 25379778 - 25379946
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||| ||| ||||||||||| | |||| |||||| ||||  |||     ||    
T  25379778 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccttctagtgccaatttcggagggctaagtccatacagagcttgctctg 25379877  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||| ||| |||| |||||||||||| |||||||||| ||||||||||||    
T  25379878 gctttaaacggggcccccgcaagcgggcggtgggattggtcccctcggattagtcgattcttggatcgg 25379946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 497 - 567
Target Start/End: Original strand, 32151539 - 32151609
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | |||||||||||||||| ||||||||||||||||| | |||||||| ||||||||||||    
T  32151539 tggctttaaacggggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcgg 32151609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 404 - 562
Target Start/End: Original strand, 34844396 - 34844557
Alignment:
Q  404 gttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgcta----atgg 499  Q
    ||||||||| || |||| || ||| | |||||||| |||||||||||||||||||  | ||||||||| |||| | ||| | ||||  |||     ||||    
T  34844396 gttggcttgagaccttggagtgtgctcctctcaaggtctcaggttcgattccctccagagccaatttcggtggactagtacatacagagctttgctatgg 34844495  T
Q  500 ctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttgg 562  Q
    ||||||||| ||||||||||||||| ||||| |||||| ||||| |||||||||||| |||||    
T  34844496 ctttaaatg-ggcccccgcaagtggatggtgggattggacccctcggattagtcggtccttgg 34844557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 45272559 - 45272428
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||| ||||||||||||||||||||||||| |||||| |||||| |||   |||     |||||||||| | |||||||||||||||| |||| ||||    
T  45272559 tctcagtttcgattccctctggtgccaatttcggtgggctaagtccatacggagcttgctctggctttaaacggggcccccgcaagtgggcggtgggatt 45272460  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||| |  |||||||||||    
T  45272459 ggtcccctcggattagttgactcttggatcgg 45272428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 52821778 - 52821648
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| ||| || |||||| ||||  |||     |||||||||| | |||||| | ||||||| |||| ||||    
T  52821778 tctcaggttcgattccctctggtgccaatttcggtgagctaagtccatacagagcttgctctggctttaaacggggcccc-gtaagtgggcggtgggatt 52821680  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| ||||||||||||    
T  52821679 ggtcccctcggattagtcgattcttggatcgg 52821648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 403 - 561
Target Start/End: Complemental strand, 45529934 - 45529772
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||| |||||||||  ||||| |||||| ||||  |||     ||    
T  45529934 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcgatgggctaagtccatacagagcttgctctg 45529835  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttg 561  Q
    |||||||| | | |||||||||||||| |||| |||||||||||| |||||||||| ||||||    
T  45529834 gctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttg 45529772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 497 - 565
Target Start/End: Original strand, 54475796 - 54475864
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatc 565  Q
    |||||||||| | |||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  54475796 tggctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatc 54475864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 403 - 490
Target Start/End: Complemental strand, 4252576 - 4252489
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaa 490  Q
    |||||||||| ||||||| || ||| | |||||||| ||||| ||| ||||||||||||||||||||||||||  ||||||| |||||    
T  4252576 ggttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgattccctctggtgccaatttcagtgatcaagtccatacaa 4252489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 30807333 - 30807165
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  30807333 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 30807234  T
Q  499 gctttaaatgagg-cccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | || |||||||||||||| |||  ||||||| |||| |||||||||| ||||||||||||    
T  30807233 gctttaaacggggccccccgcaagtgggcggtaggattggt-ccctcggattagtcgattcttggatcgg 30807165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 55371465 - 55371306
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgctaatggctt 502  Q
    |||||||||| ||| ||| ||  || |||||||||| ||||| |||||||||||| ||||||||||||| | || ||||| | ||    |||  ||||||    
T  55371465 ggttggcttgcgattttggagtatgcttctctcaaggtctcatgttcgattccctttggtgccaatttcggcggacaagttcata----gctc-tggctt 55371371  T
Q  503 taaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
     ||| | ||||| |||||||||| |||| |||||||||||| |||||||||| | ||||||||||    
T  55371370 aaaacggggccctcgcaagtgggcggtgggattggtcccctcggattagtcgatccttggatcgg 55371306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 21362997 - 21363128
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||| ||||||| || ||| |||||| ||||  |||     |||||||||| |  ||||||||||||||| |||| ||||    
T  21362997 tctcaggttcgattccctctggtgtcaatttcggtaggctaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcggtgggatt 21363096  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    ||| |||| |||||| ||| ||||||||||||    
T  21363097 ggttccctcggattaatcgattcttggatcgg 21363128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 512 - 567
Target Start/End: Complemental strand, 53848501 - 53848446
Alignment:
Q  512 cccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  53848501 cccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 53848446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 567
Target Start/End: Original strand, 48104992 - 48105062
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||   ||||||| |||||||| ||||||||||||||| | |||||||||| ||||||||||||    
T  48104992 tggctttaaacagggcccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcgg 48105062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 31537981 - 31537850
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||| ||| |||||||||||||||||||||  |||||| |||||  ||||  ||| |   |||||||||| |  ||||| ||||||||| |||||||||    
T  31537981 tctcatgtttgattccctctggtgccaattttggtgggctaagtctatacagagcttactctggctttaaacggagcccctgcaagtgggcggtgagatt 31537882  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||  ||||||||||||    
T  31537881 ggtcccctcgaattagtcaattcttggatcgg 31537850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 403 - 525
Target Start/End: Original strand, 26108309 - 26108435
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  26108309 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 26108408  T
Q  499 gctttaaatgaggcccccgcaagtggg 525  Q
    |||||||| | ||||||||||||||||    
T  26108409 gctttaaacggggcccccgcaagtggg 26108435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 499 - 567
Target Start/End: Complemental strand, 33398548 - 33398480
Alignment:
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||| ||||||| |||| | |||||||| ||||||||||||    
T  33398548 gctttaaacggggcccccgcaagtgggcggtgggattggttccctcgaattagtcgattcttggatcgg 33398480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 497 - 565
Target Start/End: Original strand, 49167174 - 49167242
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatc 565  Q
    |||||||||| | | ||||||||||||||||||| | ||||| |||||| |||||||||||| ||||||    
T  49167174 tggctttaaacgggacccccgcaagtgggtggtggggttggttcccttgaattagtcggttcatggatc 49167242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 500 - 564
Target Start/End: Complemental strand, 52455728 - 52455664
Alignment:
Q  500 ctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggat 564  Q
    ||||||| | ||||||||||||||  ||||| |||||||||||| |||||||||| |||||||||    
T  52455728 ctttaaacggggcccccgcaagtgactggtgggattggtcccctcggattagtcgattcttggat 52455664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 567
Target Start/End: Original strand, 24407395 - 24407446
Alignment:
Q  516 cgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  24407395 cgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 24407446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 440 - 478
Target Start/End: Complemental strand, 2511440 - 2511402
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  2511440 tctcaggttcgattccctctggtgccaatttcggtgggc 2511402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 567
Target Start/End: Complemental strand, 24165781 - 24165727
Alignment:
Q  513 ccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||||| |||| ||||| |||||| |||||||||| ||||||||||||    
T  24165781 ccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcgg 24165727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 403 - 543
Target Start/End: Original strand, 40940842 - 40940986
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||| | |||||| ||||  |||     ||    
T  40940842 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtggactaagtccatacagagcttgctctg 40940941  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtcccct 543  Q
     ||||||| | ||||||| ||||||||||||  ||||||||||||    
T  40940942 actttaaacggggcccccacaagtgggtggtaggattggtcccct 40940986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 565
Target Start/End: Complemental strand, 6041737 - 6041684
Alignment:
Q  512 cccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatc 565  Q
    ||||| ||| |||| |||||||||| ||||||| ||||||||||||||||||||    
T  6041737 ccccctcaaatgggcggtgagattgttccccttagattagtcggttcttggatc 6041684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 7485705 - 7485543
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaatggct 501  Q
    ||||| |||||||||||| ||  || | |||  ||| ||||||||||||||||||||| |||||||||| |||||| |||| | ||   || |  |||||    
T  7485705 ggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttcggtgggctaagttcatagcttgat-ctggct 7485607  T
Q  502 ttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||  ||||||| ||||||||  |||| ||||||| |||| |||||||||| ||||||||||||    
T  7485606 ttaaa-caggcccctgcaagtggccggtgggattggt-ccctcggattagtcgattcttggatcgg 7485543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 565
Target Start/End: Complemental strand, 8958110 - 8958049
Alignment:
Q  504 aaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatc 565  Q
    ||||| |||||||||||||||| |||| ||||||||||||  ||||| ||| ||||||||||    
T  8958110 aaatggggcccccgcaagtgggcggtgggattggtcccctctgattaatcgattcttggatc 8958049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 500 - 561
Target Start/End: Original strand, 51532907 - 51532968
Alignment:
Q  500 ctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttg 561  Q
    ||||||||| | |||||||||||||  |||| ||||||||||||  ||||||||||||||||    
T  51532907 ctttaaatgggacccccgcaagtggacggtgggattggtcccctcagattagtcggttcttg 51532968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 403 - 565
Target Start/End: Complemental strand, 34492755 - 34492589
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || ||||| ||||||||||||||| ||||||||||  ||||| |||||| ||||  |||     ||    
T  34492755 ggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccctctgctgccaatttcgttgggctaagtccatacagagcttgctctg 34492656  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatc 565  Q
    |||||||| | |||||||||||||||| |||| |||||||||  |  ||||||| | ||||||||||    
T  34492655 gctttaaacggggcccccgcaagtgggcggtgggattggtccattcagattagttgattcttggatc 34492589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 442 - 489
Target Start/End: Original strand, 1178228 - 1178275
Alignment:
Q  442 tcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    ||||||||||||| | |||||||||||||| |||||||||||| ||||    
T  1178228 tcaggttcgattctccctggtgccaatttcggtgggcaagtccataca 1178275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 566
Target Start/End: Complemental strand, 17579199 - 17579148
Alignment:
Q  515 ccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcg 566  Q
    ||||||||||| |||||||||||||||||  ||||||||| || ||||||||    
T  17579199 ccgcaagtgggcggtgagattggtcccctcagattagtcgatttttggatcg 17579148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 567
Target Start/End: Complemental strand, 32094836 - 32094769
Alignment:
Q  500 ctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||| ||| |||| ||| |||||||| ||||||||| ||   |||||||||||||||||||||    
T  32094836 ctttaaatggggctcccgtaagcgggtggtgggattggtcctctcatattagtcggttcttggatcgg 32094769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 471
Target Start/End: Complemental strand, 48972854 - 48972823
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttc 471  Q
    ||||||||||||||||||||||||||||||||    
T  48972854 tctcaggttcgattccctctggtgccaatttc 48972823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 470
Target Start/End: Original strand, 50162060 - 50162127
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    ||||| ||||||||||||||| | | | |||||||| |||||| |||||||||||||  |||||||||    
T  50162060 ggttgacttgggatcttgaagtgcgctcctctcaaggtctcagattcgattccctctattgccaattt 50162127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 471
Target Start/End: Complemental strand, 53863918 - 53863851
Alignment:
Q  404 gttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttc 471  Q
    |||||||||||| |||| || ||| | |||||||| ||| |||||| |||| ||||||||||||||||    
T  53863918 gttggcttgggaccttggagtgtgctcctctcaaggtcttaggttcaattctctctggtgccaatttc 53863851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 33698788 - 33698718
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | ||| ||||||| ||||||||| ||||||||||||   |||||||| |||| |||||||    
T  33698788 tggctttaaacggggctcccgcaaatgggtggtgggattggtcccctcaaattagtcgattctcggatcgg 33698718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 519 - 557
Target Start/End: Complemental strand, 51390193 - 51390155
Alignment:
Q  519 aagtgggtggtgagattggtccccttggattagtcggtt 557  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  51390193 aagtgggcggtgagattggtcccctcggattagtcggtt 51390155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 470
Target Start/End: Complemental strand, 52455792 - 52455762
Alignment:
Q  440 tctcaggttcgattccctctggtgccaattt 470  Q
    |||||||||||||||||||||||||||||||    
T  52455792 tctcaggttcgattccctctggtgccaattt 52455762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 568
Target Start/End: Complemental strand, 53288855 - 53288724
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||| |||||||||||||||||||||||| |||| | |||||| ||||| |||     |||||||||| | || ||||||||  ||  |||||||||    
T  53288855 tctcaggctcgattccctctggtgccaatttcggtggactaagtccatacaaagcttgctttggctttaaacg-gggccccgcaaacggacggtgagatt 53288757  T
Q  536 ggtccccttggattagtcggttcttggatcggt 568  Q
     ||||||| | |||||||| || ||||||||||    
T  53288756 agtcccctcgaattagtcgattattggatcggt 53288724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 17155099 - 17155062
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  17155099 ctcaagatctcagattcgattctctctggtgccaattt 17155062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 566
Target Start/End: Original strand, 25017620 - 25017672
Alignment:
Q  513 ccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcg 566  Q
    ||||||||||||| |||| ||||||| || |||||||||||| |||||||||||    
T  25017620 ccccgcaagtgggcggtgggattggttcc-ttggattagtcgattcttggatcg 25017672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 434 - 470
Target Start/End: Complemental strand, 28703424 - 28703388
Alignment:
Q  434 tcaagatctcaggttcgattccctctggtgccaattt 470  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  28703424 tcaaggtctcaggttcgattctctctggtgccaattt 28703388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 442 - 470
Target Start/End: Original strand, 55287859 - 55287887
Alignment:
Q  442 tcaggttcgattccctctggtgccaattt 470  Q
    |||||||||||||||||||||||||||||    
T  55287859 tcaggttcgattccctctggtgccaattt 55287887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 8e-29; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 1344989 - 1345120
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||     |||||||||| | | |||||||||||||  |||| ||||    
T  1344989 tctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacaaagcttgctctggctttaaacgggccccccgcaagtggacggtgggatt 1345088  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||||||||||| ||||||||||||    
T  1345089 ggtccccttggattagtcgattcttggatcgg 1345120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 15360278 - 15360110
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||  ||| |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  15360278 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 15360179  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | ||||||||||| |||| |||| |||||||||||| |||||||||| ||||||||||||    
T  15360178 gctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcgg 15360110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 403 - 565
Target Start/End: Original strand, 9208269 - 9208435
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca-----atgctaat 497  Q
    |||||| ||||||||||| ||  || | |||||||| ||||||||||||||||| |||||||||||||| |||||||||||| ||||      ||||  |    
T  9208269 ggttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattccccctggtgccaatttcggtgggcaagtccatacagagccttgct-tt 9208367  T
Q  498 ggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatc 565  Q
    ||||||||||| |||||||||||||||| |||| |||||||| |||  || |||||| ||||||||||    
T  9208368 ggctttaaatggggcccccgcaagtgggcggtgggattggtctcctcagaatagtcgattcttggatc 9208435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 9238992 - 9239160
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||  |||||| || |  |||     ||    
T  9238992 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatatagagcttgctttg 9239091  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| |||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  9239092 gctttaaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 9239160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 34147400 - 34147531
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||| | | |||||||||||||| |||| ||||    
T  34147400 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggatt 34147499  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| ||||||||||||    
T  34147500 ggtcccctcggattagtcgattcttggatcgg 34147531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 34160016 - 34160147
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||| | | |||||||||||||| |||| ||||    
T  34160016 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacgggccccccgcaagtgggcggtgggatt 34160115  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| ||||||||||||    
T  34160116 ggtcccctcggattagtcgattcttggatcgg 34160147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 403 - 561
Target Start/End: Complemental strand, 17149636 - 17149474
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca-----atgctaat 497  Q
    |||||| ||||||||||| || ||| | |||||||| ||||||||||||||||||||||||| |||||| || ||||||||| ||||      ||||  |    
T  17149636 ggttggtttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccctctggtgctaatttcggttggcaagtccatacagagccttgct-tt 17149538  T
Q  498 ggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttg 561  Q
    ||||||||||| ||||||||||||||   |||| |||||||||||| | |||||||||| ||||    
T  17149537 ggctttaaatggggcccccgcaagtgaacggtgggattggtcccctcgaattagtcggtccttg 17149474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 11448888 - 11449056
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || ||||||||||||||| |||||||||||||||| |||||| |||||| ||||  |||     ||    
T  11448888 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 11448987  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||| |||||||||||| |||||||||| |||||| |||||    
T  11448988 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcgg 11449056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 654289 - 654158
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||| | ||| |||||||||||| |||| ||||    
T  654289 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggatt 654190  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| || |||||||||    
T  654189 ggtcccctcggattagtcgattattggatcgg 654158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 21982500 - 21982333
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||||||  || | |||   || ||| |||||||||||||  |||||||||||||||||||| |||||| ||||  |||     ||    
T  21982500 ggttggcttgggatcttgaagtttgctcctccagaggtctgaggttcgattcccgatggtgccaatttcagtgggctaagtccatacagagcttgctctg 21982401  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||| ||||||| |||| |||||||||| ||||||||||||    
T  21982400 gctttaaacggggcccccgcaagtgggcggtgggattggt-ccctcggattagtcgattcttggatcgg 21982333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 3222778 - 3222648
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     || ||||||| | |||||| ||||||||| |||| ||||    
T  3222778 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctgtctttaaacggggcccc-gcaagtgggcggtgggatt 3222680  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| ||||||||||||    
T  3222679 ggtcccctcggattagtcgattcttggatcgg 3222648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 440 - 554
Target Start/End: Original strand, 12390479 - 12390597
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||||||||||   |||||||||||||||| |||| ||||    
T  12390479 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtgggcggtgggatt 12390578  T
Q  536 ggtccccttggattagtcg 554  Q
    |||||||| ||||||||||    
T  12390579 ggtcccctcggattagtcg 12390597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 403 - 553
Target Start/End: Original strand, 33499491 - 33499646
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttc-gattccctctggtgccaatttcagtgggcaagtccgtacaa-----tgctaa 496  Q
    |||||||||||||||||| ||  || | |||||||| |||||||||| |||||||||||||| ||||||| |||||| ||||| |||||     ||||      
T  33499491 ggttggcttgggatcttggagtttgctcctctcaaggtctcaggttcagattccctctggtgtcaatttcggtgggctagtccatacaaatctttgct-t 33499589  T
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtc 553  Q
    |||||||||||| | || || |||||||| |||| |||||||||||| |||||||||    
T  33499590 tggctttaaatgggccctccacaagtgggcggtgggattggtcccctcggattagtc 33499646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 497 - 567
Target Start/End: Original strand, 9844053 - 9844123
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | ||||||| |||||||| ||||||||||||||| | |||||||||| ||||||||||||    
T  9844053 tggctttaaacggggccccctcaagtgggcggtgagattggtcccttcggattagtcgattcttggatcgg 9844123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 662
Target Start/End: Complemental strand, 5964343 - 5964278
Alignment:
Q  597 tgtatagacaaccacttttttatcatttgatttatgactcgaatcttgaattattttgagattagt 662  Q
    |||||| ||| |||||||||||||||||||||||||| | |||||||  |||||||||||||||||    
T  5964343 tgtataaacagccacttttttatcatttgatttatgagttgaatcttacattattttgagattagt 5964278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 403 - 484
Target Start/End: Original strand, 8479329 - 8479410
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtcc 484  Q
    ||||| |||||||||||| || ||| | |||| ||||| |||||||||||| ||||||||| ||||||| ||||||||||||    
T  8479329 ggttgacttgggatcttggagtgtgctcctcttaagatttcaggttcgatttcctctggtgtcaatttcggtgggcaagtcc 8479410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 499 - 567
Target Start/End: Original strand, 14212999 - 14213067
Alignment:
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | || |||||||||||||||||| ||||||||| || |||||||||| ||||||||||||    
T  14212999 gctttaaacgggggccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcgg 14213067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 403 - 478
Target Start/End: Original strand, 12591654 - 12591729
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||||||||||||||||| ||  || | |||  ||| |||||||||||||||||||| ||||||||||||||||||    
T  12591654 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctcgtgccaatttcagtgggc 12591729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 444 - 565
Target Start/End: Original strand, 28672125 - 28672250
Alignment:
Q  444 aggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaat---ggctttaaatgaggcccccgcaagtgggtggtgagattggtc 539  Q
    |||||||||||||||||||| ||||||  |||||| |||||| ||||  |||  |   ||||||||| | | ||| |||||||||| |||| ||||||||    
T  28672125 aggttcgattccctctggtgtcaattttggtgggctaagtccatacagagcttgttttggctttaaacgggcccctcgcaagtgggcggtgggattggtc 28672224  T
Q  540 cccttggattagtcggttcttggatc 565  Q
    |||| |||||||||| ||||||||||    
T  28672225 ccctcggattagtcgattcttggatc 28672250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 11007182 - 11007350
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||  ||| ||||||||||||||| ||||| |  ||||||| |||||| |||||| ||||| |||     |     
T  11007182 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattcactctgctctcaatttcggtgggctaagtccatacaaagcttgctcta 11007281  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||  | |||||||||||||||| |||| |||||| ||||| |||||||||| ||||| ||||||    
T  11007282 gctttaagcggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattctttgatcgg 11007350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 404 - 489
Target Start/End: Original strand, 10377733 - 10377818
Alignment:
Q  404 gttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    ||||||||| ||||||| || ||| |  | ||||| |||||||||| ||||||| ||||||||||||| |||||||||||| ||||    
T  10377733 gttggcttgagatcttggagtgtgctcatgtcaaggtctcaggttcaattccctatggtgccaatttcggtgggcaagtccataca 10377818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 404 - 484
Target Start/End: Complemental strand, 6384053 - 6383974
Alignment:
Q  404 gttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtcc 484  Q
    |||||||||||| |||| || ||| | |||||||| |||||||||| || ||||| ||||||||||||||||||| |||||    
T  6384053 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcaat-ccctcgggtgccaatttcagtgggctagtcc 6383974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 440 - 566
Target Start/End: Complemental strand, 17081197 - 17081067
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||| ||| |||||||||||||| ||||||| |||||| |||||| ||||  |||     || ||||||||| |||||||||||||||| |||| ||||    
T  17081197 tctcaagtttgattccctctggtgtcaatttcggtgggctaagtccatacagagcttgctctgactttaaatggggcccccgcaagtgggcggtgggatt 17081098  T
Q  536 ggtccccttggattagtcggttcttggatcg 566  Q
    |||||||| | || ||| | |||||||||||    
T  17081097 ggtcccctcgaataagttgtttcttggatcg 17081067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 5360251 - 5360083
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatg 498  Q
    |||||||||||||||||| ||  || |||||   || ||||||||||||||||||||  |||||||||| |||||| |||||| ||||  |||     ||    
T  5360251 ggttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccctctaatgccaatttcggtgggctaagtccatacagagcttgctctg 5360152  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
     ||||||| |   ||||| |||||||| |||| |||||||||||| | |||||||| ||||| ||||||    
T  5360151 actttaaacggaacccccacaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcgg 5360083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 567
Target Start/End: Complemental strand, 21148577 - 21148523
Alignment:
Q  513 ccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||||| |||| |||||||||||| |||||||||| |||||| |||||    
T  21148577 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcgg 21148523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 470
Target Start/End: Original strand, 3907558 - 3907625
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||| |||||||||||  | ||| | |||||||||| ||| ||||||||| |||||||||||||||    
T  3907558 ggttggtttgggatcttggggtgtgctcctctcaagatttcaagttcgattctctctggtgccaattt 3907625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 656
Target Start/End: Complemental strand, 4433135 - 4433100
Alignment:
Q  621 atttgatttatgactcgaatcttgaattattttgag 656  Q
    ||||||||||||||| ||||||||||||||||||||    
T  4433135 atttgatttatgacttgaatcttgaattattttgag 4433100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 479
Target Start/End: Original strand, 21182344 - 21182419
Alignment:
Q  404 gttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggca 479  Q
    ||||||||||||| ||| || ||| | |||||||| ||| || ||||||||||| || |||||||||| |||||||    
T  21182344 gttggcttgggattttggagtgtgctcctctcaagctctgagattcgattccctgtgatgccaatttcggtgggca 21182419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 9690720 - 9690650
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | ||||| | |||||||  |||| ||||||||| || |||||||||| ||||||||||||    
T  9690720 tggctttaaacggggccctcacaagtggacggtgggattggtcctctcggattagtcgattcttggatcgg 9690650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 470
Target Start/End: Original strand, 14212946 - 14212976
Alignment:
Q  440 tctcaggttcgattccctctggtgccaattt 470  Q
    |||||||||||||||||||||||||||||||    
T  14212946 tctcaggttcgattccctctggtgccaattt 14212976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 477
Target Start/End: Original strand, 11840955 - 11840992
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtggg 477  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  11840955 tctcaggctcgattccctctggtgccaatttcggtggg 11840992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 6691574 - 6691534
Alignment:
Q  431 ctctcaagatctcaggttcgattccctctggtgccaatttc 471  Q
    |||||||| ||||||||||||||| ||| ||||||||||||    
T  6691574 ctctcaaggtctcaggttcgattctctccggtgccaatttc 6691534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 434 - 470
Target Start/End: Complemental strand, 11306194 - 11306158
Alignment:
Q  434 tcaagatctcaggttcgattccctctggtgccaattt 470  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  11306194 tcaaggtctcaggttcgattctctctggtgccaattt 11306158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 8e-29; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 52983673 - 52983804
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||  |||     |||||||||| | |||||||||||||||| |||| ||||    
T  52983673 tctcaggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggatt 52983772  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| ||||||||||||    
T  52983773 ggtcccctcggattagtcgattcttggatcgg 52983804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 441 - 567
Target Start/End: Original strand, 34723854 - 34723984
Alignment:
Q  441 ctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagattg 536  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||     |||||||||| | ||||||||||||||||||||| |||||    
T  34723854 ctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacaaagcttgctctggctttaaacggggcccccgcaagtgggtggtgggattg 34723953  T
Q  537 gtccccttggattagtcggttcttggatcgg 567  Q
    |||| || |||||||||| ||||||||||||    
T  34723954 gtcctctcggattagtcgattcttggatcgg 34723984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 27528975 - 27528807
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  27528975 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 27528876  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||| | | |||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||    
T  27528875 gctttatacggggcccccgcaagtgggcggtgagattggtcccctcggattagtcgattcttggatcgg 27528807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 40059032 - 40058864
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | ||||  || ||||||||||||||| |||||||||||||||| |||||| |||||| ||||  |||     ||    
T  40059032 ggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 40058933  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  40058932 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 40058864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 9517784 - 9517653
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||| ||||  |||     || ||||||| | |||||||||| |||||||||||||||    
T  9517784 tctcaggttcgattctctctggtgccaatttcagtgggctaagtccatacagagcttgctctgactttaaacggggcccccgcaggtgggtggtgagatt 9517685  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| ||||||||||||    
T  9517684 ggtcccctcggattagtcgattcttggatcgg 9517653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 33696459 - 33696291
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||| ||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  33696459 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 33696360  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| |||||||||||||||| |||||||||||||| || |||||||||  ||||||||||||    
T  33696359 gctttaaatggggcccccgcaagtgggcggtgagattggtcctctcggattagtcaattcttggatcgg 33696291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 34844901 - 34844770
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||| ||||  |||     |||||||||| | |||||||||||||||| |||| ||||    
T  34844901 tctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggatt 34844802  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| ||||||||||||    
T  34844801 ggtcccctcggattagtcgattcttggatcgg 34844770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 32986214 - 32986382
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||| ||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  32986214 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 32986313  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
     ||||||||| |||||||||||||||| |||| |||||||||||| ||| |||||| ||||||||||||    
T  32986314 actttaaatggggcccccgcaagtgggcggtgggattggtcccctcggaatagtcgattcttggatcgg 32986382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 403 - 563
Target Start/End: Complemental strand, 54127522 - 54127358
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||  ||| |||||||||| ||||||||| ||||||||||| |||||| |||||  ||||  |||     ||    
T  54127522 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctcttgtgccaatttcggtgggctaagtctatacagagcttgctctg 54127423  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttgga 563  Q
    |||||||| | |||||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  54127422 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttgga 54127358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 5609345 - 5609214
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||| ||||  |||     |||||||||||| |||||||||||||||  |||| ||||    
T  5609345 tctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaatggggcccccgcaagtggacggtgggatt 5609246  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    | |||||| |||||||||| ||||||||||||    
T  5609245 gatcccctcggattagtcgattcttggatcgg 5609214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 440 - 565
Target Start/End: Original strand, 49287912 - 49288040
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa----tgctaatggctttaaatgaggcccccgcaagtgggtggtgagat 534  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||| |||||    |||| ||||||||||| | ||| |||||||||||| | ||||||    
T  49287912 tctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacaaaatttgct-atggctttaaacg-ggctcccgcaagtgggcgctgagat 49288009  T
Q  535 tggtccccttggattagtcggttcttggatc 565  Q
    ||||||||| |||||||||| ||||||||||    
T  49288010 tggtcccctcggattagtcgattcttggatc 49288040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 437 - 567
Target Start/End: Complemental strand, 45787850 - 45787716
Alignment:
Q  437 agatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgggtggtgag 532  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||  |||     ||||||||||   |||||||||||||||  |||| |    
T  45787850 agatctcaggttcgattccctctgatgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagtggacggtggg 45787751  T
Q  533 attggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||| | |||||||| ||||||||||||    
T  45787750 attggtcccctcgaattagtcgattcttggatcgg 45787716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 13771663 - 13771494
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa----t 497  Q
    |||||||||||||||||||||  || |  ||||||| |||||  |||||||||||||| || |||| || |||||| |||||| ||| | ||||     |    
T  13771663 ggttggcttgggatcttgaagtttgctcatctcaaggtctcaaattcgattccctctgatgtcaatctcggtgggctaagtccatacgaagctatgctct 13771564  T
Q  498 ggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||| | ||| ||||||||||| || |||||||||||||||   |||||||||||||||||||||    
T  13771563 ggctttaaacggggctcccgcaagtggatgatgagattggtcccctataattagtcggttcttggatcgg 13771494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 440 - 566
Target Start/End: Original strand, 32990489 - 32990619
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||| | ||||||||||| |||||| |||||| ||||  |||     |||||||||| | |||||||||||||||| |||| ||||    
T  32990489 tctcaggttcgattccctttagtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggatt 32990588  T
Q  536 ggtccccttggattagtcggttcttggatcg 566  Q
    |||||||| ||| |||||| |||||||||||    
T  32990589 ggtcccctcggactagtcgattcttggatcg 32990619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 403 - 482
Target Start/End: Original strand, 13017746 - 13017825
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagt 482  Q
    ||||||||||| ||||||||| ||||| |||||||| |||||||||| |||||||||| |||||||||  ||||||||||    
T  13017746 ggttggcttggaatcttgaagtgtgttcctctcaaggtctcaggttccattccctctgttgccaattttggtgggcaagt 13017825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 442 - 567
Target Start/End: Original strand, 20566406 - 20566535
Alignment:
Q  442 tcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgggtggtgagattgg 537  Q
    |||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||| |  ||||||||||||||| | || ||||||    
T  20566406 tcaggttcgattccctctggtgccaatttcggtgggcaaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcgctgggattgg 20566505  T
Q  538 tccccttggattagtcggttcttggatcgg 567  Q
    ||||||  ||||||||| ||||||||||||    
T  20566506 tcccctcagattagtcgattcttggatcgg 20566535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 403 - 563
Target Start/End: Original strand, 25852231 - 25852396
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatg 498  Q
    |||||||||||||||||| ||  || | |||  ||| |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  25852231 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 25852330  T
Q  499 gcttt-aaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttgga 563  Q
    ||||| ||| | | ||| ||||||||||   || |||||||||||| |||||||||||||||||||    
T  25852331 gctttaaaacgggaccctcgcaagtgggcaatgggattggtcccctcggattagtcggttcttgga 25852396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 403 - 566
Target Start/End: Original strand, 34835546 - 34835713
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgcta---atg 498  Q
    |||||||||||||||||  ||  || | |||| ||| ||||| |||||||||||||||||| ||||||| |||||| |||||| |||   ||||    ||    
T  34835546 ggttggcttgggatcttagagtttgctcctcttaaggtctcatgttcgattccctctggtgtcaatttcggtgggctaagtccatacggagctatgtctg 34835645  T
Q  499 gctttaaat-gaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcg 566  Q
    ||||||||| | | ||||||||||||||  |||||||||||||||| |||||||||| ||||| |||||    
T  34835646 gctttaaatagggccccccgcaagtggg-cgtgagattggtcccctcggattagtcgattcttagatcg 34835713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 394 - 560
Target Start/End: Complemental strand, 7392152 - 7391984
Alignment:
Q  394 cccatctggggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca---- 489  Q
    ||||| ||||||||||||||||||||| ||  || | |||  ||| |||||||||||||||||| ||||||||||||| ||||  |||||| ||||        
T  7392152 cccatttggggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctatggtgccaatttcggtggttaagtccatacagagt 7392053  T
Q  490 atgctaatggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttctt 560  Q
     ||||  |||||||||||| || ||||   |||||| |||| ||||| |||||| ||||||||||||||||    
T  7392052 ttgct-ctggctttaaatg-ggacccccatagtgggcggtgggattgttcccctcggattagtcggttctt 7391984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 20078127 - 20077996
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||| ||||||| |||||||||||||| |||||| |||||| ||||  |||     |||||||||| | |||||||| ||||||| |||| ||||    
T  20078127 tctcaggtttgattcccactggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgtaagtgggcggtgggatt 20078028  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
     || |||| |||||||||| ||||||||||||    
T  20078027 agttccctcggattagtcgattcttggatcgg 20077996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 46714409 - 46714578
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgatt-ccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---t 497  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||| |||| ||||||||||||| |||||| |||||| ||||  |||     |    
T  46714409 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatttccctttggtgccaatttcggtgggctaagtccatacagagcttgccct 46714508  T
Q  498 ggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
     |||||||| | |||||||||||||||| |||| |||||||||||| |||||||||  |||||| |||||    
T  46714509 tgctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttgaatcgg 46714578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 19660614 - 19660544
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||   |||||||||||||||| |||| ||||| |||||| |||||||||| ||||||||||||    
T  19660614 tggctttaaacagggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcgg 19660544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 440 - 490
Target Start/End: Complemental strand, 22630329 - 22630279
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaa 490  Q
    |||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  22630329 tctcaggttcgattccctctggtgccaattttggtgggcaagtccatacaa 22630279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 567
Target Start/End: Original strand, 27574433 - 27574503
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | |||||||||||||||| |||||| |||||||||| |||||| ||  ||||||||||||    
T  27574433 tggctttaaaaggggcccccgcaagtgggcggtgagtttggtcccctcggattaatcaattcttggatcgg 27574503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 440 - 554
Target Start/End: Complemental strand, 36131653 - 36131535
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||| ||||||||||||| |||| | |||||| ||||  |||    ||| ||||||| | | |||||| ||||||| |||| ||||    
T  36131653 tctcaggttcgattccctatggtgccaatttcggtggcctaagtccatacagagcttgctatgactttaaacgggacccccgtaagtgggcggtgggatt 36131554  T
Q  536 ggtccccttggattagtcg 554  Q
    |||||||| ||||||||||    
T  36131553 ggtcccctcggattagtcg 36131535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 51498723 - 51498791
Alignment:
Q  129 atgagattcattttggaaaccactttgctcttgatggagtgtcaagaccaaagtcagagatttgtaggt 197  Q
    |||||||||| ||||| ||||| ||||| ||||||||  | ||||||||||| ||||||||||||||||    
T  51498723 atgagattcactttggtaaccattttgcacttgatgggatatcaagaccaaaatcagagatttgtaggt 51498791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 436 - 553
Target Start/End: Complemental strand, 18875663 - 18875543
Alignment:
Q  436 aagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgggtggtga 531  Q
    ||||||||||||||||||||||||| || ||||||| |||||| |||||| ||||  |||     |||||||||| | ||||||| ||||||||| |||     
T  18875663 aagatctcaggttcgattccctctgatgtcaatttcggtgggctaagtccatacagagcttgctctggctttaaacg-ggcccccacaagtgggtagtgg 18875565  T
Q  532 gattggtccccttggattagtc 553  Q
    ||||| |||||| |||||||||    
T  18875564 gattgatcccctcggattagtc 18875543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 414 - 484
Target Start/End: Original strand, 19220561 - 19220631
Alignment:
Q  414 gatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtcc 484  Q
    ||||||| || ||| | |||||||| | |||||||||||| ||||| |||||||||||| |||||||||||    
T  19220561 gatcttggagtgtgctcctctcaaggtttcaggttcgatttcctctagtgccaatttcaatgggcaagtcc 19220631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 405 - 470
Target Start/End: Original strand, 38869794 - 38869860
Alignment:
Q  405 ttggcttgggatcttgaagcgtgtttctc-tcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||||||||||| | || ||| | ||| ||||| |||||||||||||||||||||||||||||||    
T  38869794 ttggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaattt 38869860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 567
Target Start/End: Complemental strand, 55158409 - 55158355
Alignment:
Q  513 ccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| ||||||||| |||||||||||| |||||||||| || |||||||||    
T  55158409 ccccgcaaatgggtggtgggattggtcccctcggattagtcgatttttggatcgg 55158355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 403 - 471
Target Start/End: Original strand, 2351030 - 2351098
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttc 471  Q
    ||||||||||| |||||||||  || | |||   || ||||||||||||||||||||||||||||||||    
T  2351030 ggttggcttggaatcttgaagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttc 2351098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 511 - 567
Target Start/End: Original strand, 4064989 - 4065045
Alignment:
Q  511 gcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||| |||||||| |||| |||||||||||| |||||||||| || |||||||||    
T  4064989 gcccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcgg 4065045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 497 - 565
Target Start/End: Original strand, 4912041 - 4912109
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatc 565  Q
    |||||||||| |  |||||||||||||||||||| ||||| |||||  | |||||||| ||||||||||    
T  4912041 tggctttaaacggagcccccgcaagtgggtggtgtgattgatccccccgaattagtcgattcttggatc 4912109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 567
Target Start/End: Original strand, 44343569 - 44343699
Alignment:
Q  441 ctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagattg 536  Q
    |||| ||||||||||||||||||| |||||  |||||| |||||| ||||  |||     || ||||||| | ||| |||||||||||| |||| |||||    
T  44343569 ctcaagttcgattccctctggtgctaattttggtgggctaagtccatacagagcttgctctgactttaaacggggctcccgcaagtgggcggtgggattg 44343668  T
Q  537 gtccccttggattagtcggttcttggatcgg 567  Q
    ||||||| | |||||||| |||||| |||||    
T  44343669 gtcccctcgaattagtcgattcttgaatcgg 44343699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 494
Target Start/End: Original strand, 12710196 - 12710287
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgct 494  Q
    |||||| ||||||||||| ||  || |||||| ||| |||||||||||||||||| |  || ||||||| |||| ||||||| |||| ||||    
T  12710196 ggttggtttgggatcttggagtatgcttctcttaaggtctcaggttcgattccctttaatgtcaatttcggtggacaagtccatacagtgct 12710287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 471
Target Start/End: Complemental strand, 13873438 - 13873407
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttc 471  Q
    ||||||||||||||||||||||||||||||||    
T  13873438 tctcaggttcgattccctctggtgccaatttc 13873407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 543
Target Start/End: Complemental strand, 22625140 - 22625097
Alignment:
Q  500 ctttaaatgaggcccccgcaagtgggtggtgagattggtcccct 543  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||    
T  22625140 ctttaaatggggcccccgcaagtgggcggtgggattggtcccct 22625097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 567
Target Start/End: Original strand, 23639758 - 23639809
Alignment:
Q  516 cgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||  |||| |||||||||||| |||||||||| ||||||||||||    
T  23639758 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcgg 23639809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 567
Target Start/End: Original strand, 23645416 - 23645467
Alignment:
Q  516 cgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||  |||| |||||||||||| |||||||||| ||||||||||||    
T  23645416 cgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcgg 23645467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 478
Target Start/End: Original strand, 37455622 - 37455668
Alignment:
Q  431 ctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||||||| ||||||||||||||||| ||||||||||||||| |||||    
T  37455622 ctctcaaggtctcaggttcgattccc-ctggtgccaatttcaatgggc 37455668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 497 - 567
Target Start/End: Original strand, 51535735 - 51535806
Alignment:
Q  497 tggctttaaatgaggccccc-gcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | ||||||| ||||||||| |||| |||||||||||| | |||||||| ||||| ||||||    
T  51535735 tggctttaaacggggcccccagcaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcgg 51535806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 467
Target Start/End: Original strand, 56409976 - 56410039
Alignment:
Q  404 gttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaa 467  Q
    |||||||||||| |||| || ||| | |||||||| ||||||||||||||| | ||||||||||    
T  56409976 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggttcgattctccctggtgccaa 56410039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 478
Target Start/End: Complemental strand, 12500201 - 12500163
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  12500201 tctcaggtttgattccctctggtgccaatttcaatgggc 12500163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 566
Target Start/End: Original strand, 13017843 - 13017897
Alignment:
Q  512 cccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcg 566  Q
    ||||||||||||||  ||| ||||||||| || |||||||||||| |||||||||    
T  13017843 cccccgcaagtgggcagtgggattggtccactcggattagtcggtccttggatcg 13017897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 22488110 - 22488040
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | ||||||||||| |||| |||| ||||| ||||||   |||||||||| ||||||||||    
T  22488110 tggctttaaacggggcccccgcaaatgggcggtgggattgatcccctcaaattagtcggtccttggatcgg 22488040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 478
Target Start/End: Complemental strand, 22625213 - 22625175
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  22625213 tctcaggttcgattccctctggagccaatttcggtgggc 22625175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 403 - 489
Target Start/End: Complemental strand, 41621776 - 41621690
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    |||||||||| ||||||| ||  || | |||||||| ||||| ||| |||| ||||||||||||||||  |||||||| ||| ||||    
T  41621776 ggttggcttgagatcttggagtttgctcctctcaaggtctcatgtttgatttcctctggtgccaattttggtgggcaaatccataca 41621690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 614 - 656
Target Start/End: Complemental strand, 47442348 - 47442306
Alignment:
Q  614 ttttatcatttgatttatgactcgaatcttgaattattttgag 656  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||    
T  47442348 ttttgtcatttgatttattacttgaatcttgaattattttgag 47442306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 470
Target Start/End: Original strand, 51535667 - 51535697
Alignment:
Q  440 tctcaggttcgattccctctggtgccaattt 470  Q
    |||||||||||||||||||||||||||||||    
T  51535667 tctcaggttcgattccctctggtgccaattt 51535697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 567
Target Start/End: Original strand, 52494623 - 52494673
Alignment:
Q  517 gcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||| |||| |||||||||||| | |||||||| ||||||||||||    
T  52494623 gcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcgg 52494673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 6666447 - 6666410
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  6666447 ctcaagatctcaggttcgattctctctggtgcccattt 6666410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 444 - 481
Target Start/End: Original strand, 10125878 - 10125915
Alignment:
Q  444 aggttcgattccctctggtgccaatttcagtgggcaag 481  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  10125878 aggtttgattccccctggtgccaatttcagtgggcaag 10125915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 567
Target Start/End: Original strand, 33289190 - 33289239
Alignment:
Q  518 caagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||  ||||||||| ||||||| |||||||||| ||||||||||||    
T  33289190 caagtggacggtgagattagtcccctcggattagtcgattcttggatcgg 33289239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 37109372 - 37109335
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  37109372 ctcaaggtctcaggttcgattctctctggtgccaattt 37109335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 476
Target Start/End: Original strand, 38740895 - 38740940
Alignment:
Q  431 ctctcaagatctcaggttcgattccctctggtgccaatttcagtgg 476  Q
    |||| ||| |||||||||||||||||||||||| ||||||| ||||    
T  38740895 ctcttaaggtctcaggttcgattccctctggtgtcaatttcggtgg 38740940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 497 - 566
Target Start/End: Original strand, 40252404 - 40252473
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcg 566  Q
    |||||||||||| | | |||||||||||| ||||||||||||| |||   ||||||||||| || |||||    
T  40252404 tggctttaaatgggtcacccgcaagtgggcggtgagattggtctcctcaaattagtcggtttttagatcg 40252473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 51250543 - 51250506
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  51250543 ctcaagatctcaagttcgattccctccggtgccaattt 51250506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 497 - 566
Target Start/End: Complemental strand, 53787139 - 53787070
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcg 566  Q
    |||||||||| |  |||||||||| |||| |||| |||| |||||||  |||||||||||| ||||||||    
T  53787139 tggctttaaacggagcccccgcaaatgggcggtgggattagtcccctcagattagtcggtttttggatcg 53787070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 503 - 567
Target Start/End: Complemental strand, 9978585 - 9978521
Alignment:
Q  503 taaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||| | |||||||||||||| |||| |||||||||| | |||||||| | ||||| ||||||    
T  9978585 taaatgggtcccccgcaagtgggcggtgggattggtcccatcggattagttgattcttagatcgg 9978521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 511 - 567
Target Start/End: Complemental strand, 43719155 - 43719099
Alignment:
Q  511 gcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||| ||||||| |||| ||||||||  || |||||||||| ||||||||||||    
T  43719155 gcccccgaaagtgggcggtgggattggtcatctcggattagtcgattcttggatcgg 43719099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 8e-29; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 32729562 - 32729729
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgct---aatgg 499  Q
    |||||||||||||||||  ||  || | |||||||  |||||||||||||||||| ||||||||||||| |||||||||||| ||||  |||     |||    
T  32729562 ggttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccctatggtgccaatttcggtgggcaagtccatacagagcttgctctgg 32729661  T
Q  500 ctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||| || ||||||||||||| |||| ||||| |||||||||||||||||||  |||||||||    
T  32729662 ctttaaatggggtccccgcaagtgggcggtgggattgatccccttggattagtcggtctttggatcgg 32729729  T

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Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 4621417 - 4621249
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  4621417 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 4621318  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | || ||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  4621317 gctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 4621249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 24674410 - 24674578
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  24674410 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 24674509  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||| |||||||||||| | |||||||| ||||||||||||    
T  24674510 gctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcgg 24674578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 24122077 - 24122208
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||| | ||| |||||||||||| |||| ||||    
T  24122077 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtgggatt 24122176  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| ||||||||||||    
T  24122177 ggtcccctcggattagtcgattcttggatcgg 24122208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 7197426 - 7197259
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaa----tgctaatg 498  Q
    |||||||||||||||||| ||  || | |||   || ||||||||||||||||||||| |||||||||| ||||| |||||  ||||     ||||  ||    
T  7197426 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctgatgccaatttcggtgggtaagtcaatacagaccttgctc-tg 7197328  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||| ||||||||| ||||||||||||||||| |||||||||| ||| ||||||||    
T  7197327 gctttaaacgaggcccctgcaagtgggcggtgagattggtcccctcggattagtcgattcatggatcgg 7197259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 15059545 - 15059414
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||| ||||  |||     |||||||||| | || ||||||||||||| |||||||||    
T  15059545 tctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggtccccgcaagtgggcggtgagatt 15059446  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||| ||||||||||||    
T  15059445 ggtcccctcgaattagtcgattcttggatcgg 15059414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 440 - 563
Target Start/End: Original strand, 30677230 - 30677357
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||||| | |||||||||||||| |||| ||||    
T  30677230 tctcaggtttgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctttggctttaaatgggacccccgcaagtgggcggtgggatt 30677329  T
Q  536 ggtccccttggattagtcggttcttgga 563  Q
    ||||||||  ||||||||||||||||||    
T  30677330 ggtcccctcagattagtcggttcttgga 30677357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 7578426 - 7578594
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatg 498  Q
    |||||||||||||||||| ||  |||| |||   || |||||||||||||||||| ||||||||||||| |||||| |||||| ||||| |||     ||    
T  7578426 ggttggcttgggatcttggagtttgttcctccagaggtctcaggttcgattccctatggtgccaatttcggtgggctaagtccatacaaagcttgctctg 7578525  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
     ||||||| | ||||| ||||||||||||||| ||||||| |||| |||||||| | || |||||||||    
T  7578526 actttaaacggggccctcgcaagtgggtggtgggattggttccctcggattagttgatttttggatcgg 7578594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 395 - 567
Target Start/End: Complemental strand, 45859231 - 45859055
Alignment:
Q  395 ccatctggggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgc 493  Q
    |||| ||| ||||||||||||||||| ||  || | ||||  || |||||||||||||||||||||||||||||||| |||||| |||||| ||||  ||    
T  45859231 ccatttggagttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacatcgc 45859132  T
Q  494 t---aatggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |     | ||||||||   ||||||||||||||||||||  |||||||||||| |||||||| | || |||||||||    
T  45859131 ttgctcttgctttaaacagggcccccgcaagtgggtggtaggattggtcccctcggattagttgattattggatcgg 45859055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 7766870 - 7766739
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||||||||||||||||||| |||||| |||||| |||||| ||||  |||     || ||||||| | |||||||||||||||| |||| ||||    
T  7766870 tctcaggttcgattccctctggtgctaatttcggtgggctaagtccatacagagcttgctctgactttaaacggggcccccgcaagtgggcggtgggatt 7766771  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| |||||| |||||    
T  7766770 ggtcccctcggattagtcgattcttgaatcgg 7766739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 440 - 566
Target Start/End: Original strand, 16899557 - 16899687
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgct----aatggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| ||||| |||      ||| ||  || | |||||| ||||||||  |||||||||    
T  16899557 tctcaggttcgattccctctggtgccaatttcggtgggccagtccatacaaagctttgctctggtttagaacggggcccctgcaagtggacggtgagatt 16899656  T
Q  536 ggtccccttggattagtcggttcttggatcg 566  Q
    |||||||| |||||||||||| |||||||||    
T  16899657 ggtcccctcggattagtcggtccttggatcg 16899687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 410 - 489
Target Start/End: Complemental strand, 25237162 - 25237083
Alignment:
Q  410 ttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    ||||||||||| ||  || |||||||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  25237162 ttgggatcttggagtttgcttctctcaaggtctcaggttcgattccctctagtgccaatttcggtgggcaagtccataca 25237083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 497 - 567
Target Start/End: Original strand, 34778454 - 34778524
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | |||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||    
T  34778454 tggctttaaacggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcgg 34778524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 46607827 - 46607995
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatg 498  Q
    ||||| |||||||||||| ||  || | |||  ||| |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  46607827 ggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 46607926  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
     ||||||| |   |||||||||||||| |||| ||||| |||||| |||||||||||| ||||||||||    
T  46607927 actttaaaaggcccccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcgg 46607995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 9500498 - 9500367
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||| ||||  |||     |||||||||| |  |||||| |||||||| |||||||||    
T  9500498 tctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggagcccccacaagtgggcggtgagatt 9500399  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||| | | |||||||||| ||||||||||||    
T  9500398 ggtctcttcggattagtcgattcttggatcgg 9500367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 17935823 - 17935954
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa----tgctaatggctttaaatgaggcccccgcaagtgggtggtgagat 534  Q
    |||||||||||||||| ||| ||||||||||| |||||| |||||| ||||     ||||  |||||||||| | |||||||||||||||| | || |||    
T  17935823 tctcaggttcgattccttctagtgccaatttcggtgggctaagtccatacagagtttgctc-tggctttaaacggggcccccgcaagtgggcgatgggat 17935921  T
Q  535 tggtccccttggattagtcggttcttggatcgg 567  Q
    |||||| || |||||||||| ||||||||||||    
T  17935922 tggtccactcggattagtcgattcttggatcgg 17935954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 23734170 - 23734302
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa----tgctaatggctttaaatgaggcccc-cgcaagtgggtggtgaga 533  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||| ||||     ||||| || ||||||| | |||||| |||||||||| ||||| |    
T  23734170 tctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagtttgcta-tgcctttaaacggggccccccgcaagtgggcggtgaaa 23734268  T
Q  534 ttggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||  ||||||||| |||||| |||||    
T  23734269 ttggtcccctcagattagtcgattcttgaatcgg 23734302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 23741362 - 23741494
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa----tgctaatggctttaaatgaggcccc-cgcaagtgggtggtgaga 533  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||| ||||     ||||| || ||||||| | |||||| |||||||||| ||||| |    
T  23741362 tctcaggttcgattccctctgatgccaatttcggtgggctaagtccatacagagtttgcta-tgcctttaaacggggccccccgcaagtgggcggtgaaa 23741460  T
Q  534 ttggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||  ||||||||| |||||| |||||    
T  23741461 ttggtcccctcagattagtcgattcttgaatcgg 23741494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 403 - 489
Target Start/End: Original strand, 1486437 - 1486521
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    |||||||||||||||||| ||  || | |||||||| |||||||||||||||||| |||||||||||||  |||| |||||| ||||    
T  1486437 ggttggcttgggatcttggag--tgctactctcaaggtctcaggttcgattccctttggtgccaatttcgatgggtaagtccataca 1486521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 489
Target Start/End: Original strand, 16539616 - 16539711
Alignment:
Q  394 cccatctggggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    ||||| ||||||||| ||||||||||| || | | | ||  |||| ||||||||| |||||||||||||||||||||  |||||||||||| ||||    
T  16539616 cccatttggggttggtttgggatcttggagtgagctccttgcaaggtctcaggtttgattccctctggtgccaattttggtgggcaagtccataca 16539711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 403 - 490
Target Start/End: Original strand, 24216995 - 24217082
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaa 490  Q
    ||||| |||||||||||| || ||| | |||||||| |||||||||||||| ||| ||||||||||||| ||||| || ||| |||||    
T  24216995 ggttgacttgggatcttggagtgtgctcctctcaaggtctcaggttcgattacctttggtgccaatttcggtgggtaaatccatacaa 24217082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 403 - 543
Target Start/End: Original strand, 7946861 - 7947004
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||| ||||||||||  || | |||   || ||||| |||||||||||||||||||||||||| |||||| |||||  ||||  |||     |     
T  7946861 ggttggcttgagatcttgaagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgggctaagtctatacagagcttgctctc 7946960  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtcccct 543  Q
    |||||||||| |||||| |||||||||||||||||||||||||||    
T  7946961 gctttaaatggggcccc-gcaagtgggtggtgagattggtcccct 7947004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 403 - 543
Target Start/End: Original strand, 8077664 - 8077808
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatg 498  Q
    |||||||||||||||||| ||  || | |||   || ||||||||||||||| |||||||||||||||| |||||| |||||| ||||  |||     ||    
T  8077664 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattctctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 8077763  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtcccct 543  Q
    ||||||||   |||||||||||||||| |||| ||||||||||||    
T  8077764 gctttaaacagggcccccgcaagtgggcggtgggattggtcccct 8077808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 8254834 - 8254764
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | |||||||||||||||| |||| ||||| |||||||| |||||||| |||||| |||||    
T  8254834 tggctttaaacggggcccccgcaagtgggcggtgggattgatccccttgaattagtcgattcttgaatcgg 8254764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 37351534 - 37351465
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | ||||||| |||||||| |||| |||||||||||| |||||||||||| ||||||||||    
T  37351534 tggctttaaacg-ggcccccacaagtgggcggtgggattggtcccctcggattagtcggtccttggatcgg 37351465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 404 - 478
Target Start/End: Original strand, 39964530 - 39964604
Alignment:
Q  404 gttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    ||||||||| || |||| || ||| | |||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  39964530 gttggcttgcgaccttggagtgtgctcctctcaaggtctcaggtttgattccctctggtgccaatttcggtgggc 39964604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 567
Target Start/End: Complemental strand, 40145942 - 40145893
Alignment:
Q  518 caagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||||    
T  40145942 caagtgggtggtgagtttggtcccctcggattagtcgattcttggatcgg 40145893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 1378952 - 1379082
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa----tgctaatggctttaaatgaggcccccgcaagtgggtggtgagat 534  Q
    ||||| |||||||| ||||||||| ||||||| |||||| |||||| ||||     ||||  |||||||||| | |||||||||||||||  ||||||||    
T  1378952 tctcatgttcgatttcctctggtgtcaatttcggtgggctaagtccatacagaacttgctc-tggctttaaacg-ggcccccgcaagtggacggtgagat 1379049  T
Q  535 tggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||  ||||||||| ||||| ||||||    
T  1379050 tggtcccctcagattagtcgattcttagatcgg 1379082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 18646907 - 18647038
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa----tgctaatggctttaaatgaggcccccgcaagtgggtggtgagat 534  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||  |||||    ||||  |||||||||| |  ||||| | ||||||| ||||||||    
T  18646907 tctcaggttcgattctctctggtgccaatttcggtgggctaagtctatacaaagtttgct-ctggctttaaacggagcccctgtaagtgggcggtgagat 18647005  T
Q  535 tggtccccttggattagtcggttcttggatcgg 567  Q
    || |||||| | |||||||| |||||| |||||    
T  18647006 tgatcccctcgaattagtcgattcttgaatcgg 18647038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 442 - 540
Target Start/End: Complemental strand, 23232406 - 23232300
Alignment:
Q  442 tcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aa----tggctttaaatgaggcccccgcaagtgggtggtgaga 533  Q
    |||||||||||||||||||| ||||||||| |||||| |||||| ||||  |||   ||    |||||||||||| | ||||||||||||||||||| ||    
T  23232406 tcaggttcgattccctctggcgccaatttcggtgggctaagtccatacagagcttgcaagctctggctttaaatgggacccccgcaagtgggtggtggga 23232307  T
Q  534 ttggtcc 540  Q
    |||||||    
T  23232306 ttggtcc 23232300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 512 - 567
Target Start/End: Complemental strand, 27454931 - 27454876
Alignment:
Q  512 cccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| ||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  27454931 cccccgcatgtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 27454876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 440 - 478
Target Start/End: Original strand, 168255 - 168293
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  168255 tctcaggttcgattccctctggtgccaatttcggtgggc 168293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 403 - 489
Target Start/End: Original strand, 1138596 - 1138682
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    |||||||||| ||||||| || ||| | |||||||| ||| |||||||| || |||| ||||||||||| |||| ||||||| ||||    
T  1138596 ggttggcttgagatcttggagtgtgctcctctcaaggtcttaggttcgaatctctctagtgccaatttcggtggacaagtccataca 1138682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 403 - 489
Target Start/End: Complemental strand, 19034566 - 19034480
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    |||||| ||||||||||| ||  |||| |||  ||| | ||||||||||||  |||||||||||||||| |||||||||||| ||||    
T  19034566 ggttggtttgggatcttggagtttgttcctcaaaaggtttcaggttcgattatctctggtgccaatttcggtgggcaagtccataca 19034480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 404 - 555
Target Start/End: Original strand, 37047010 - 37047165
Alignment:
Q  404 gttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgct----aatgg 499  Q
    |||||||||||| |||| || ||| | |||||||| ||||||||| ||||||| ||||| | |||||  |||||| ||||| ||||  |||      | |    
T  37047010 gttggcttgggaccttggagtgtgctcctctcaaggtctcaggtttgattccccctggtacaaattttggtgggctagtccatacagagctttgctctag 37047109  T
Q  500 ctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcgg 555  Q
    ||||||||| ||||||| |||||||  |||| |||||| ||||| |||||||||||    
T  37047110 ctttaaatggggcccccacaagtggacggtgggattggacccctaggattagtcgg 37047165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 566
Target Start/End: Complemental strand, 40802135 - 40802082
Alignment:
Q  513 ccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcg 566  Q
    |||||||||||||||||||||||||||| || | |||||||| |||||| ||||    
T  40802135 ccccgcaagtgggtggtgagattggtcctctagaattagtcgattcttgaatcg 40802082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 567
Target Start/End: Original strand, 48699875 - 48699944
Alignment:
Q  498 ggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||| |  ||||||||||||||| |||| ||||| |||| | |||||||||| ||||||||||||    
T  48699875 ggctttaaacggagcccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcgg 48699944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 567
Target Start/End: Complemental strand, 8779816 - 8779748
Alignment:
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | ||||||| ||||| || |||| |||||||||||| |||||||||| ||||| ||||||    
T  8779816 gctttaaacggggcccccacaagtaggcggtgggattggtcccctcggattagtcgattcttagatcgg 8779748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 510 - 566
Target Start/End: Complemental strand, 26513217 - 26513161
Alignment:
Q  510 ggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcg 566  Q
    ||||||| |||||||| |||| || ||||||||| |||||||||| |||||||||||    
T  26513217 ggcccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcg 26513161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 442 - 478
Target Start/End: Complemental strand, 36156029 - 36155993
Alignment:
Q  442 tcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||||||||||||||||||||||||||||| ||||||    
T  36156029 tcaggttcgattccctctggtgccaatttcggtgggc 36155993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 512 - 567
Target Start/End: Original strand, 35138118 - 35138173
Alignment:
Q  512 cccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||||||| |||| ||||| | |||| |||||||||||| ||||||||||    
T  35138118 cccccgcaagtgggcggtgggattgattccctcggattagtcggtccttggatcgg 35138173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 490
Target Start/End: Complemental strand, 46113545 - 46113494
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaa 490  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||| |||||    
T  46113545 tctcaggttcgattccctctggtaccaatttcggtgggctaagtccatacaa 46113494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 559
Target Start/End: Original strand, 2537808 - 2537870
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttct 559  Q
    |||||||||| | | |||||||||||||| || | |||||||||||| ||||||||| |||||    
T  2537808 tggctttaaacgggccccccgcaagtgggcggagggattggtcccctcggattagtcagttct 2537870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 431 - 489
Target Start/End: Complemental strand, 20907413 - 20907355
Alignment:
Q  431 ctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    |||||||| ||||| |||| |||| || ||||||||||||||||||| |||||| ||||    
T  20907413 ctctcaaggtctcacgttcaattcactttggtgccaatttcagtgggtaagtccataca 20907355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 556
Target Start/End: Complemental strand, 20999333 - 20999186
Alignment:
Q  413 ggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgct----aatggctttaaatg 508  Q
    |||||||| || ||| || ||||||||||||||| || |||| || |||| |||||||| |||||| ||||| ||||  |||      |||||||||||     
T  20999333 ggatcttggagtgtgcttttctcaagatctcaggctcaattctctgtggtaccaatttcggtgggctagtccatacagagctttacgctggctttaaata 20999234  T
Q  509 aggcccccgcaagtgggtggtgagattggtccccttggattagtcggt 556  Q
    |||| ||| |||||||  ||||  ||||| ||||| ||||||||||||    
T  20999233 aggctccctcaagtggacggtggtattggacccctcggattagtcggt 20999186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 34228899 - 34228965
Alignment:
Q  404 gttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||||||||| || | || ||||| |||||||| ||||||||| ||||| ||| |||||||||||    
T  34228899 gttggcttgggacctcggagtgtgttcctctcaaggtctcaggttggattctctccggtgccaattt 34228965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 431 - 489
Target Start/End: Complemental strand, 41470634 - 41470576
Alignment:
Q  431 ctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    |||||||| ||||| |||||||||||    |||||||||||||||||| ||||||||||    
T  41470634 ctctcaaggtctcaagttcgattccccacagtgccaatttcagtgggctagtccgtaca 41470576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Original strand, 2799917 - 2799954
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  2799917 ctcaaggtctcaggttcgattctctctggtgccaattt 2799954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 546
Target Start/End: Original strand, 17447302 - 17447437
Alignment:
Q  414 gatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaa-----tgctaatggctttaaatg 508  Q
    ||||||| || ||| |||||| ||| |||| |||| ||||| ||||||||||||||| ||||| ||| ||| |||||     ||||  ||| ||||||||    
T  17447302 gatcttggagtgtgcttctctgaaggtctctggtttgattctctctggtgccaattttagtggacaattccatacaaagccttgct-ctggatttaaatg 17447400  T
Q  509 aggcccccgcaagtgggtggtgagattggtccccttgg 546  Q
     | |||||||||||||| |||| |||| ||||||||||    
T  17447401 -gacccccgcaagtgggaggtgggatttgtccccttgg 17447437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 482
Target Start/End: Complemental strand, 25496666 - 25496589
Alignment:
Q  405 ttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagt 482  Q
    |||||||||||||||| ||  || | |||| ||| ||||| |||||||||||||| ||||| ||||| ||| ||||||    
T  25496666 ttggcttgggatcttggagattgctcctcttaaggtctcaagttcgattccctctagtgcctatttcggtgagcaagt 25496589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Original strand, 29753704 - 29753741
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  29753704 ctcaaggtctcaggttcgattctctctggtgccaattt 29753741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 33700794 - 33700757
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  33700794 ctcaaggtctcaggttcgattctctctggtgccaattt 33700757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 410 - 470
Target Start/End: Original strand, 40810498 - 40810559
Alignment:
Q  410 ttgggatcttgaagcgtgtttctct-caagatctcaggttcgattccctctggtgccaattt 470  Q
    ||||||||| | || ||||| |||| |||| ||||||||||||||| |||||||||||||||    
T  40810498 ttgggatctgggagtgtgttcctcttcaaggtctcaggttcgattctctctggtgccaattt 40810559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 440 - 476
Target Start/End: Complemental strand, 20487333 - 20487297
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgg 476  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  20487333 tctcaagttcgattccctctggtgccaatttcggtgg 20487297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 511 - 567
Target Start/End: Original strand, 22910000 - 22910056
Alignment:
Q  511 gcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||||||| |||| |||| ||||||| |||||||||| | ||| ||||||    
T  22910000 gcccccgcaagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcgg 22910056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 29057517 - 29057449
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttc 471  Q
    |||||| ||||||||||| ||  || | |||  ||| |||||||||||||||||||| |||||||||||    
T  29057517 ggttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgattccctcttgtgccaatttc 29057449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 434 - 470
Target Start/End: Original strand, 32524387 - 32524423
Alignment:
Q  434 tcaagatctcaggttcgattccctctggtgccaattt 470  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  32524387 tcaagatctcaagttcgattctctctggtgccaattt 32524423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 5262 - 5094
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||  ||| |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  5262 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 5163  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | ||||||||||| |||| |||| |||||||||||| |||||||||| ||||||||||||    
T  5162 gctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcgg 5094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 404 - 567
Target Start/End: Complemental strand, 7488 - 7321
Alignment:
Q  404 gttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tgg 499  Q
    ||||||||||||||||| ||  || | |||   |||||||||||||||||||||| |||||||||||| |||||| |||||| ||||  |||     |||    
T  7488 gttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagctttctctgg 7389  T
Q  500 ctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||| | |||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  7388 ctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 7321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 2e-26; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 4718703 - 4718834
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||| | |||||||||||||||| |||| ||||    
T  4718703 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggatt 4718802  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| ||||||||||||    
T  4718803 ggtcccctcggattagtcgattcttggatcgg 4718834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 3734803 - 3734635
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatg 498  Q
    |||||||||||||||||| ||  || | |||  ||| |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  3734803 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 3734704  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | ||||||||||| ||||  ||| |||||||||||| |||||||||| ||||||||||||    
T  3734703 gctttaaacggggcccccgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcgg 3734635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 403 - 567
Target Start/End: Complemental strand, 34237835 - 34237667
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  34237835 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 34237736  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||| | |||| |||||||||||| |||||||||| ||||||||||||    
T  34237735 gctttaaacggggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcgg 34237667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 39349277 - 39349445
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  39349277 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 39349376  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||||||||||| |||| ||||| |||||| |||||||||| ||||||||||||    
T  39349377 gctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcgg 39349445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 445 - 567
Target Start/End: Original strand, 2618249 - 2618375
Alignment:
Q  445 ggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagattggtcc 540  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||  |||     |||||||||| |  ||||||||||||||| |||| |||||||||    
T  2618249 ggttcgattccctctggtgccaatttcagtgggctaagtccatacagagcttgctctggctttaaacggagcccccgcaagtgggcggtgggattggtcc 2618348  T
Q  541 ccttggattagtcggttcttggatcgg 567  Q
    ||| |||||||||| ||||||||||||    
T  2618349 cctcggattagtcgattcttggatcgg 2618375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 437 - 567
Target Start/End: Complemental strand, 8765672 - 8765538
Alignment:
Q  437 agatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgag 532  Q
    |||||||||||||||||||||||||||||||||||  ||||| |||||| ||||  |||     |||||||||| | ||| |||||||||||| |||| |    
T  8765672 agatctcaggttcgattccctctggtgccaatttcgatgggctaagtccatacagagcttgctctggctttaaacggggctcccgcaagtgggcggtggg 8765573  T
Q  533 attggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||| |||||||||| ||||||||||||    
T  8765572 attggtcccctcggattagtcgattcttggatcgg 8765538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 15259549 - 15259418
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||| | |||||||||||||||| ||||  |||    
T  15259549 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgtaatt 15259450  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||||| ||||||||||||    
T  15259449 ggtcccctcgaattagtcgattcttggatcgg 15259418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 21603288 - 21603419
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||| ||||||||||||| |||||| ||| || ||||  |||     |||||||||| | |||||||||||||||| |||| ||||    
T  21603288 tctcaggttcgattccctatggtgccaatttcggtgggctaagcccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggatt 21603387  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| |||||||||| ||||||||||||    
T  21603388 ggtcccctcggattagtcgattcttggatcgg 21603419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 403 - 566
Target Start/End: Complemental strand, 26169028 - 26168862
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgctaat---gg 499  Q
    |||| ||||||||||||| ||  || | |||||||| ||||||||| ||||||  ||| |||||||||| |||||||||| | ||||  |||  |   ||    
T  26169028 ggtttgcttgggatcttggagtttgctcctctcaaggtctcaggtttgattcctcctgatgccaatttcggtgggcaagttcatacagagcttgttctgg 26168929  T
Q  500 ctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcg 566  Q
    ||||||||||| ||| |||||||||| | ||||||||||||||| ||| |||||| |||||||||||    
T  26168928 ctttaaatgagcccctcgcaagtgggggatgagattggtcccctcggagtagtcgattcttggatcg 26168862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 403 - 566
Target Start/End: Original strand, 18128534 - 18128701
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgctaa----tg 498  Q
    ||||| ||||||||||||||| ||| | || ||||| ||| || |||||||| |||||||||||||||| |||||| | ||| || |  |||      ||    
T  18128534 ggttgacttgggatcttgaagtgtgctcctttcaaggtcttagattcgattctctctggtgccaatttcggtgggcgaatccataaagagctttgctctg 18128633  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcg 566  Q
    |||||||| | |||||||||||||||| |||| ||||||||| ||  |||||||||||||||||||||    
T  18128634 gctttaaacggggcccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcg 18128701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 28193495 - 28193663
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||  |||||| ||||  |||     ||    
T  28193495 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggttaagtccatacagagcttgctctg 28193594  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | ||||||  |||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  28193595 gctttaaacggggcccctacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 28193663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 429 - 566
Target Start/End: Complemental strand, 6953161 - 6953021
Alignment:
Q  429 ttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgg 524  Q
    |||||| ||| |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||||||||||   ||||||||||||| |    
T  6953161 ttctctaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacagggcccccgcaagttg 6953062  T
Q  525 gtggtgagattggtccccttggattagtcggttcttggatcg 566  Q
    | |||| ||||||| |||| |||||||||| |||||||||||    
T  6953061 gcggtgggattggt-ccctcggattagtcgattcttggatcg 6953021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 394 - 567
Target Start/End: Original strand, 14632966 - 14633143
Alignment:
Q  394 cccatctggggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatg 492  Q
    ||||| ||||||||||||||||||||| ||  || | |||   || |||||||||||||||||||||||||||||||| |||||| |||||  ||||  |    
T  14632966 cccatttggggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtctatacagag 14633065  T
Q  493 ctaa---tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||     ||||||| || |  ||  || |||||||| |||| ||||||||||||||||||||||| ||||||||||||    
T  14633066 cttgctctggctttgaacggagcgtccacaagtgggcggtgggattggtccccttggattagtcgattcttggatcgg 14633143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 2639493 - 2639423
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | |||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||    
T  2639493 tggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcgg 2639423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 431 - 567
Target Start/End: Original strand, 36094733 - 36094873
Alignment:
Q  431 ctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgctaa----tggctttaaatgaggcccccgcaagtgggt 526  Q
    |||||||| |||||||||||||||||||||||  ||||||| || | ||||||| ||||| || ||    || |||| ||| |||||||||||||||||     
T  36094733 ctctcaaggtctcaggttcgattccctctggtatcaatttcggtagacaagtccatacaaagcaaagctctgtctttcaataaggcccccgcaagtggga 36094832  T
Q  527 ggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    || |   |||||||||| ||||||||||||  |||||||||    
T  36094833 ggcggtgttggtcccctcggattagtcggtctttggatcgg 36094873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 440 - 564
Target Start/End: Original strand, 32879337 - 32879465
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||| | ||||  |||     || | ||||| | ||||||| |||||||| |||| ||||    
T  32879337 tctcaggttcgattccctctggtgccaatttcggtgggctaagttcatacagagcttgctctgacattaaacggggcccccacaagtgggcggtgggatt 32879436  T
Q  536 ggtccccttggattagtcggttcttggat 564  Q
    |||||||| |||||||||| |||||||||    
T  32879437 ggtcccctcggattagtcgattcttggat 32879465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 403 - 489
Target Start/End: Complemental strand, 34639386 - 34639301
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    |||||||||||||||||| || ||| | |||||||| ||||||| |||| ||||||||||||||||||| ||||| |||||| ||||    
T  34639386 ggttggcttgggatcttggagtgtgctcctctcaaggtctcaggctcga-tccctctggtgccaatttcggtgggtaagtccataca 34639301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 437 - 567
Target Start/End: Complemental strand, 264545 - 264412
Alignment:
Q  437 agatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgggtggtgag 532  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||  ||||  |||     |||||||||| | ||||||| ||| |||| ||||||    
T  264545 agatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacg-ggcccccacaaatgggcggtgag 264447  T
Q  533 attggtccccttggattagtcggttcttggatcgg 567  Q
    |||| |||||| | |||||||| ||||||||||||    
T  264446 attgatcccctcgaattagtcgattcttggatcgg 264412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 437 - 567
Target Start/End: Original strand, 651376 - 651509
Alignment:
Q  437 agatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgggtggtgag 532  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||  ||||  |||     |||||||||| | ||||||| ||| |||| ||||||    
T  651376 agatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacg-ggcccccacaaatgggcggtgag 651474  T
Q  533 attggtccccttggattagtcggttcttggatcgg 567  Q
    |||| |||||| | |||||||| ||||||||||||    
T  651475 attgatcccctcgaattagtcgattcttggatcgg 651509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 437 - 567
Target Start/End: Original strand, 837111 - 837244
Alignment:
Q  437 agatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgggtggtgag 532  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||||  ||||  |||     |||||||||| | ||||||| ||| |||| ||||||    
T  837111 agatctcaggttcgattccctctagtgccaatttcggtgggctaagtctatacatagcttgctctggctttaaacg-ggcccccacaaatgggcggtgag 837209  T
Q  533 attggtccccttggattagtcggttcttggatcgg 567  Q
    |||| |||||| | |||||||| ||||||||||||    
T  837210 attgatcccctcgaattagtcgattcttggatcgg 837244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 432 - 553
Target Start/End: Complemental strand, 3403653 - 3403528
Alignment:
Q  432 tctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaa----tgctaatggctttaaatgaggcccccgcaagtgggtg 527  Q
    ||||||| ||| | |||||||||| ||||||||||||||| |||||||||||| |||||    |  |  |||||||||||| ||||| || ||||||| |    
T  3403653 tctcaaggtcttatgttcgattccatctggtgccaatttcggtgggcaagtccatacaaaactttgttttggctttaaatggggccctcgtaagtgggcg 3403554  T
Q  528 gtgagattggtccccttggattagtc 553  Q
    ||||| |||||||||| | |||||||    
T  3403553 gtgaggttggtcccctcgaattagtc 3403528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 440 - 566
Target Start/End: Original strand, 10292113 - 10292242
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgt---acaatgctaatggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||||||||||||||||||| |||||||||||||||||  ||||| |   | | ||||  |||||||||| | ||||||| |||||||| |||| ||||    
T  10292113 tctcaggttcgattccctctgatgccaatttcagtgggctgagtccatcagagattgct-ctggctttaaacggggcccccacaagtgggcggtgggatt 10292211  T
Q  536 ggtccccttggattagtcggttcttggatcg 566  Q
    |||||| | |||||||| | |||||||||||    
T  10292212 ggtcccttcggattagttgattcttggatcg 10292242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 442 - 567
Target Start/End: Original strand, 28908883 - 28909012
Alignment:
Q  442 tcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgc----taatggctttaaatgaggcccccgcaagtgggtggtgagattgg 537  Q
    |||||||| ||||||||||||| ||||| |||||||||||||| ||||  ||    |  |||||||||| | ||| |||||||||||| | || |||||     
T  28908883 tcaggttcaattccctctggtgtcaattacagtgggcaagtccatacagagctttgttctggctttaaacggggctcccgcaagtgggcgatgtgattga 28908982  T
Q  538 tccccttggattagtcggttcttggatcgg 567  Q
    ||||||  ||||||||||| ||||||||||    
T  28908983 tcccctcagattagtcggtccttggatcgg 28909012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 403 - 482
Target Start/End: Original strand, 3794812 - 3794891
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagt 482  Q
    ||||||||| |||||||||||  || | |||||||| ||||| ||||| |||||||||||||||||||| | ||||||||    
T  3794812 ggttggcttaggatcttgaagtttgctcctctcaaggtctcatgttcggttccctctggtgccaatttcggcgggcaagt 3794891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 403 - 482
Target Start/End: Complemental strand, 11714999 - 11714920
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagt 482  Q
    |||||| ||| ||||||| ||  || |||||||||||| ||||||||||||||| ||| |||||||||||| ||||||||    
T  11714999 ggttggtttgagatcttggagtttgcttctctcaagatttcaggttcgattccccctgatgccaatttcagcgggcaagt 11714920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 403 - 482
Target Start/End: Original strand, 41070782 - 41070861
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagt 482  Q
    ||||| |||||||||||| || ||| | |||||||| ||||| |||||||||||| ||||| ||||||| ||||||||||    
T  41070782 ggttgacttgggatcttggagtgtgctactctcaaggtctcaagttcgattccctttggtgtcaatttcggtgggcaagt 41070861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 20305929 - 20306097
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||  ||  || | |||  ||| |||||| ||||||||| |||||||||||||||  ||||| |||||| ||||  |||     ||    
T  20305929 ggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctg 20306028  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | | |||||||||||||| |||| |||||||||||| | |||||||| | ||||||||||    
T  20306029 gctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcgg 20306097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 21092562 - 21092730
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||  ||  || | |||  ||| |||||| ||||||||| |||||||||||||||  ||||| |||||| ||||  |||     ||    
T  21092562 ggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattccttctggtgccaatttcgatgggctaagtccatacagagcttgctctg 21092661  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | | |||||||||||||| |||| |||||||||||| | |||||||| | ||||||||||    
T  21092662 gctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcgg 21092730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 24018518 - 24018568
Alignment:
Q  513 ccccgcaagtgggtggtgagattggtccccttggattagtcggttcttgga 563  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||||||||    
T  24018518 ccccacaagtgggcggtgagattggtccccttgaattagtcggttcttgga 24018568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 616 - 688
Target Start/End: Original strand, 2577991 - 2578061
Alignment:
Q  616 ttatcatttgatttatgactcgaatcttgaattattttgagattagtcgattatatagattagcttataggtt 688  Q
    ||||||||||||||||||||  |||||| ||||||||||||| |||| ||| ||||  |||||||||||||||    
T  2577991 ttatcatttgatttatgactttaatcttcaattattttgagactagtagatgatat--attagcttataggtt 2578061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 440 - 564
Target Start/End: Complemental strand, 4698866 - 4698738
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgt--acaa--tgctaatggctttaaatgaggcccccgcaagtgggtggtgagat 534  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||| |  | ||  ||||  |||||||||| |  ||||||||||||| | |||| |||    
T  4698866 tctcaggttcgattccctctggtgtcaatttcggtgggctaagtccatgaagaacttgctc-tggctttaaacggagcccccgcaagtgagcggtgggat 4698768  T
Q  535 tggtccccttggattagtcggttcttggat 564  Q
    ||||||||| |||||||||| ||| |||||    
T  4698767 tggtcccctcggattagtcgattcatggat 4698738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 432 - 560
Target Start/End: Original strand, 12312896 - 12313027
Alignment:
Q  432 tctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaatgctaa----tggctttaaatgaggcccccgcaagtgggtg 527  Q
    |||||| |||||| |||||||| ||||||||||||||||   |||||||| ||  |||| |||      |||||||||||| ||||||| |||||||| |    
T  12312896 tctcaaaatctcaagttcgatttcctctggtgccaattttgatgggcaaggccacacaaagctttgatttggctttaaatg-ggcccccacaagtgggcg 12312994  T
Q  528 gtgagattggtccccttggattagtcggttctt 560  Q
    ||| ||||| |||||| | ||||||||||||||    
T  12312995 gtgggattgatcccctcgaattagtcggttctt 12313027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 431 - 490
Target Start/End: Complemental strand, 32206288 - 32206229
Alignment:
Q  431 ctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtacaa 490  Q
    |||||||||||||| ||||||||||||||| || ||||||||||||  ||| ||||||||    
T  32206288 ctctcaagatctcatgttcgattccctctgatgtcaatttcagtggaaaagcccgtacaa 32206229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 442 - 567
Target Start/End: Original strand, 42328064 - 42328193
Alignment:
Q  442 tcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagattgg 537  Q
    ||||||| ||||||||||| |||||||||| |||||| |||||| ||||  |||     |||||||||| | ||||||| |||||||  | || ||||||    
T  42328064 tcaggtttgattccctctgttgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccacaagtggacgatgggattgg 42328163  T
Q  538 tccccttggattagtcggttcttggatcgg 567  Q
    |||||| | |||||||| ||||||||||||    
T  42328164 tcccctcgaattagtcgattcttggatcgg 42328193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 567
Target Start/End: Original strand, 16990722 - 16990772
Alignment:
Q  517 gcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||| |||| || |||||||||||||||||||||| ||||||||||    
T  16990722 gcaagtgggcggtgggactggtccccttggattagtcggtccttggatcgg 16990772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 566
Target Start/End: Original strand, 28964097 - 28964220
Alignment:
Q  446 gttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagattggtccc 541  Q
    |||||||||| ||||||||||||||| |||||| |||||| |||   ||||    |||||||||| | ||||||||||||||||  ||| ||||||||||    
T  28964097 gttcgattccatctggtgccaatttcggtgggctaagtccatacggagctatgtctggctttaaacggggcccccgcaagtggg-cgtgggattggtccc 28964195  T
Q  542 cttggattagtcggttcttggatcg 566  Q
    || | |||||||| ||||| |||||    
T  28964196 ctcgaattagtcgattcttagatcg 28964220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 614 - 659
Target Start/End: Original strand, 30051670 - 30051715
Alignment:
Q  614 ttttatcatttgatttatgactcgaatcttgaattattttgagatt 659  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||    
T  30051670 ttttatcatttgatatataacttgaatcttgaattattttgagatt 30051715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 480
Target Start/End: Complemental strand, 34694728 - 34694679
Alignment:
Q  431 ctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaa 480  Q
    |||||||| ||| |||||||||||| ||||||||||||||| ||||||||    
T  34694728 ctctcaaggtcttaggttcgattccatctggtgccaatttcggtgggcaa 34694679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 567
Target Start/End: Complemental strand, 42643261 - 42643130
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||| ||||||||||||| ||||||||||| |||||| |||||| ||||  |||     || ||| ||| | || ||||||||||||| |||| ||||    
T  42643261 tctcagattcgattccctctagtgccaatttcggtgggctaagtccatacagagcttgctctgtcttgaaacgggggccccgcaagtgggcggtgggatt 42643162  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||| | |||||| | ||||||||||||    
T  42643161 ggtcccctcgcattagttgattcttggatcgg 42643130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 429 - 489
Target Start/End: Complemental strand, 8387598 - 8387538
Alignment:
Q  429 ttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    |||||||| | ||||| |||||||| ||||||||||||||||  |||||||||||| ||||    
T  8387598 ttctctcagggtctcaagttcgatttcctctggtgccaattttggtgggcaagtccataca 8387538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 22200740 - 22200672
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttc 471  Q
    |||||| ||||||||||| ||  |  |||||||||  |||||||||||||||||||| |||||||||||    
T  22200740 ggttggtttgggatcttggagtttacttctctcaaagtctcaggttcgattccctctagtgccaatttc 22200672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 478
Target Start/End: Complemental strand, 27746515 - 27746440
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    |||||| ||||||||||| ||  || | |||  ||| |||||||||||||||||| ||||||||||||| ||||||    
T  27746515 ggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgggc 27746440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 567
Target Start/End: Original strand, 28088408 - 28088475
Alignment:
Q  500 ctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||| |||| ||||||||||| |||| ||||| ||||||  || |||||| ||||||||||||    
T  28088408 ctttaaatggggcctccgcaagtgggcggtgggattgatcccctcagaatagtcgattcttggatcgg 28088475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 478
Target Start/End: Original strand, 16317672 - 16317710
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  16317672 tctcatgttcgattctctctggtgccaatttcagtgggc 16317710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 437 - 471
Target Start/End: Original strand, 25248404 - 25248438
Alignment:
Q  437 agatctcaggttcgattccctctggtgccaatttc 471  Q
    ||||||||||||||||||||||||||| |||||||    
T  25248404 agatctcaggttcgattccctctggtgtcaatttc 25248438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 34610769 - 34610699
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| ||| ||| |||||||||| |||   ||||||||||| | |||||||| ||||||||||||    
T  34610769 tggctttaaacgagcccctcgcaagtgggcggtagaattggtcccctcgaattagtcgattcttggatcgg 34610699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Original strand, 18540353 - 18540390
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  18540353 ctcaaggtctcaggttcgattctctctggtgccaattt 18540390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 497 - 554
Target Start/End: Original strand, 25248467 - 25248523
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcg 554  Q
    |||||||||| | ||||| |||||||||| |||| |||||||||||| ||||||||||    
T  25248467 tggctttaaacg-ggccctcgcaagtgggcggtgggattggtcccctcggattagtcg 25248523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Original strand, 33017269 - 33017306
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  33017269 ctcaaggtctcaggttcgattctctctggtgccaattt 33017306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 531 - 567
Target Start/End: Complemental strand, 5740431 - 5740395
Alignment:
Q  531 agattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  5740431 agattggtcccctcggattagtcggtccttggatcgg 5740395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 13749068 - 13749155
Alignment:
Q  394 cccatctggggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagt 482  Q
    |||||||||||||| |||||||| ||| ||  || | |||||||| | |||||||||||| |||  |||||||||||  ||||||||||    
T  13749068 cccatctggggttgacttgggat-ttggagtctgctcctctcaaggtttcaggttcgatttccttcggtgccaattttggtgggcaagt 13749155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 431 - 565
Target Start/End: Original strand, 27821 - 27953
Alignment:
Q  431 ctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaatggctttaaatgaggcccccgcaagtgggtggt 529  Q
    |||||||| |||| ||||||||||||| |||||||||||| ||||||| |||||| ||| | ||||   ||||||||| ||| | |||||||||||||||    
T  27821 ctctcaaggtctcgggttcgattccctgtggtgccaatttgagtgggctaagtccatacgaagctat--gctttaaat-agggcgccgcaagtgggtggt 27917  T
Q  530 gagattggtccccttggattagtcggttcttggatc 565  Q
    |||||| ||||||| |||||||||||||||||||||    
T  27918 gagatttgtcccctcggattagtcggttcttggatc 27953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 440 - 565
Target Start/End: Original strand, 161863 - 161992
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||||||| |||| |||||||||||||||| |||| ||||    
T  161863 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggcttttaatggggcccccgcaagtgggcggtgggatt 161962  T
Q  536 ggtccccttggattagtcggttcttggatc 565  Q
    |||||||| |||||||||| ||||||||||    
T  161963 ggtcccctcggattagtcgattcttggatc 161992  T

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Target: scaffold0016 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 440 - 561
Target Start/End: Original strand, 32342 - 32467
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||| ||||||| ||||||||| |||||| |||||| ||||  |||     |||||||||||| ||||||||||||||||||||| ||||    
T  32342 tctcaggttcgatttcctctggagccaatttcggtgggctaagtccatacagagcttgctctggctttaaatgtggcccccgcaagtgggtggtgggatt 32441  T
Q  536 ggtccccttggattagtcggttcttg 561  Q
    |||||||| |||||||||| ||||||    
T  32442 ggtcccctcggattagtcgattcttg 32467  T

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Target: scaffold0070 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 440 - 567
Target Start/End: Original strand, 40379 - 40509
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     |||||||||| | |||||||||||||||| |||| ||||    
T  40379 tctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctggctttaaacggggcccccgcaagtgggcggtgggatt 40478  T
Q  536 ggtccccttggattagtcggttcttggatcgg 567  Q
    ||| |||| |||||||||| ||||||||||||    
T  40479 ggt-ccctcggattagtcgattcttggatcgg 40509  T

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Target: scaffold0623 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 403 - 561
Target Start/End: Complemental strand, 1236 - 1074
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||| ||||||||| |||||| |||||| ||||  |||     ||    
T  1236 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctg 1137  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttg 561  Q
    |||||||||| |||||||||||||||  |||| |||||||||||| | |||||||| ||||||    
T  1136 gctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttg 1074  T

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Target: scaffold0366 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 403 - 561
Target Start/End: Complemental strand, 9479 - 9317
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaa---tg 498  Q
    |||||||||||||||||| ||  || | |||   || |||||||||||||||||||||| ||||||||| |||||| |||||| ||||  |||     ||    
T  9479 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggagccaatttcggtgggctaagtccatacagagcttgctctg 9380  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttg 561  Q
    |||||||||| |||||||||||||||  |||| |||||||||||| | |||||||| ||||||    
T  9379 gctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttg 9317  T

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Target: scaffold0049 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 403 - 567
Target Start/End: Original strand, 66779 - 66939
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgctaatggct 501  Q
    |||||||||||||||||| ||  || | |||  ||| ||||| |||||||||| ||||||||||||||  |||||| |||||  |    ||||  |||||    
T  66779 ggttggcttgggatcttggagtttgctcctccaaaggtctcacgttcgattccttctggtgccaattttggtgggctaagtcgct----tgctc-tggct 66873  T
Q  502 ttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    ||||| | |||||||||||||||| |||| |||||||||||| |||||||||||| ||||||||||    
T  66874 ttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcgg 66939  T

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Target: scaffold0102 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 440 - 565
Target Start/End: Original strand, 39146 - 39275
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggcaa-gtccgtacaatgctaat---ggctttaaatgaggcccccgcaagtgggtggtgagatt 535  Q
    ||||| |||||||||||||||||||||||||| |||||| | |||| ||||   ||  |   ||||||||| | |||||||||||||||| |||| ||||    
T  39146 tctcaagttcgattccctctggtgccaatttcggtgggctatgtccatacagaacttgttctggctttaaacggggcccccgcaagtgggcggtgggatt 39245  T
Q  536 ggtccccttggattagtcggttcttggatc 565  Q
    |||||||| |||||||||| ||||||||||    
T  39246 ggtcccctcggattagtcgattcttggatc 39275  T

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Target: scaffold0026 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 403 - 563
Target Start/End: Complemental strand, 97546 - 97382
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatg 498  Q
    |||||||||||||||||| ||  || | |||  ||| |||||||||||||||||||||||||||||||| |||||| |||||| ||||  |||     ||    
T  97546 ggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagcttgctctg 97447  T
Q  499 gctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttgga 563  Q
     ||||||| | | |||||||||||||| |||| ||||||||| || | ||||||||||| |||||    
T  97446 actttaaacgggacccccgcaagtgggcggtgggattggtcctctcgtattagtcggtttttgga 97382  T

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Target: scaffold0051 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 442 - 567
Target Start/End: Complemental strand, 53012 - 52883
Alignment:
Q  442 tcaggttcgattccctctggtgccaatttcagtgggc-aagtccgtacaatgct---aatggctttaaatgaggcccccgcaagtgggtggtgagattgg 537  Q
    |||||||||||||||||||||||||||||| |||||| || ||| ||||  |||     |||||||||| | |||||||||| ||||| |||  ||||||    
T  53012 tcaggttcgattccctctggtgccaatttcggtgggcaaaatccatacagagcttgctctggctttaaacggggcccccgcaggtgggcggtaggattgg 52913  T
Q  538 tccccttggattagtcggttcttggatcgg 567  Q
    ||| || |||||||||| |||||| |||||    
T  52912 tcctctcggattagtcgattcttgaatcgg 52883  T

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Target: scaffold1175 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 2508 - 2438
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||| | |||||||||||||||| |||| |||||||||||| ||||||||| || |||| |||||    
T  2508 tggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcgg 2438  T

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Target: scaffold0160 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 403 - 489
Target Start/End: Complemental strand, 29322 - 29236
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtccgtaca 489  Q
    ||||||||||| ||||||||| ||||| |||||||| ||| ||||||||||||| ||| ||||| |||| || || |||||| ||||    
T  29322 ggttggcttggaatcttgaagtgtgttcctctcaaggtcttaggttcgattcccgctgatgccattttcggtcggtaagtccataca 29236  T

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Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 431 - 484
Target Start/End: Complemental strand, 123203 - 123150
Alignment:
Q  431 ctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagtcc 484  Q
    ||||| |||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  123203 ctctctagatctcatgttcgattccctctgttgccaatttcggtgggcaagtcc 123150  T

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Target: scaffold0328 (Bit Score: 36; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 445 - 567
Target Start/End: Complemental strand, 13182 - 13059
Alignment:
Q  445 ggttcgattccctctggtgccaatttcagtggg-caagtccgtacaatgctaatggctttaaatgaggcccccgcaagtgggtggtgagattggtcccct 543  Q
    ||||||||||||||||||||||||||| |||||  |||||| ||||  |||     ||||||| | |||||||||||||||  |||| ||||| ||||||    
T  13182 ggttcgattccctctggtgccaatttcggtgggttaagtccatacagagcttgctactttaaacggggcccccgcaagtggacggtgggattgatcccct 13083  T
Q  544 tggattagtcggttcttggatcgg 567  Q
      ||||||| | ||||||||||||    
T  13082 cagattagttgattcttggatcgg 13059  T

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Target: scaffold0328; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 567
Target Start/End: Original strand, 15106 - 15175
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttggatcgg 567  Q
    |||||||||||| | |||||||||||||| || | |||||||| ||| |||||||||  ||||||||||||    
T  15106 tggctttaaatgggccccccgcaagtgggcgg-gggattggtctcctcggattagtcaattcttggatcgg 15175  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 621 - 673
Target Start/End: Complemental strand, 70254 - 70202
Alignment:
Q  621 atttgatttatgactcgaatcttgaattattttgagattagtcgattatatag 673  Q
    |||| |||||||| | |||||||||||||||||||||||||| ||| ||||||    
T  70254 attttatttatgatttgaatcttgaattattttgagattagtagatgatatag 70202  T

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Target: scaffold0199 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 403 - 482
Target Start/End: Complemental strand, 8587 - 8508
Alignment:
Q  403 ggttggcttgggatcttgaagcgtgtttctctcaagatctcaggttcgattccctctggtgccaatttcagtgggcaagt 482  Q
    |||||||||||||||||| ||  || | |||   || ||||||||||||||  |||||||||||||||| ||||||||||    
T  8587 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattatctctggtgccaatttcggtgggcaagt 8508  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 478
Target Start/End: Original strand, 20276 - 20314
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgggc 478  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  20276 tctcaggtttgattccctctggtgccaatttcaatgggc 20314  T

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Target: scaffold0238 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 2732 - 2695
Alignment:
Q  433 ctcaagatctcaggttcgattccctctggtgccaattt 470  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  2732 ctcaaggtctcaggttcgattctctctggtgccaattt 2695  T

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Target: scaffold0460 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 440 - 476
Target Start/End: Complemental strand, 8322 - 8286
Alignment:
Q  440 tctcaggttcgattccctctggtgccaatttcagtgg 476  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  8322 tctcaagttcgattccctctggtgccaatttcggtgg 8286  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 497 - 561
Target Start/End: Complemental strand, 41726 - 41662
Alignment:
Q  497 tggctttaaatgaggcccccgcaagtgggtggtgagattggtccccttggattagtcggttcttg 561  Q
    |||||||||| | |||||| |||||||||   || |||||||||||| |||||||||| ||||||    
T  41726 tggctttaaacggggcccctgcaagtgggcaatgggattggtcccctcggattagtcgattcttg 41662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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