View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1145_low_176 (Length: 227)
Name: NF1145_low_176
Description: NF1145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1145_low_176 |
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Alignment Details
Target: chr5 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 38072428 - 38072312
Alignment:
| Q |
1 |
gagagacgaaagagacataaaagacagggagatgtcatgcgagagtagtgagagggggagatagagaaagtgtttgttttggtattttttatcttgtcat |
100 |
Q |
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| T |
38072428 |
gagagacgaaagagacataaaagacagggagatgtcatgcgagagtagtgagagggggagatagagaaagtgtttgttttggtattttttatcttgtcat |
38072329 |
T |
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| Q |
101 |
atggtttagtgaggttt |
117 |
Q |
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||||||||||||||||| |
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| T |
38072328 |
atggtttagtgaggttt |
38072312 |
T |
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