View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1145_low_20 (Length: 544)

Name: NF1145_low_20
Description: NF1145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1145_low_20
NF1145_low_20
[»] chr3 (21 HSPs)
chr3 (98-456)||(18537740-18538100)
chr3 (235-456)||(10578434-10578657)
chr3 (235-456)||(15341321-15341544)
chr3 (235-456)||(15356688-15356911)
chr3 (235-453)||(1646601-1646821)
chr3 (235-456)||(15599986-15600209)
chr3 (235-456)||(15606531-15606754)
chr3 (235-456)||(17196850-17197073)
chr3 (235-456)||(10571668-10571892)
chr3 (235-433)||(17780243-17780443)
chr3 (235-433)||(19081544-19081744)
chr3 (235-456)||(16481560-16481783)
chr3 (235-456)||(17137260-17137484)
chr3 (235-456)||(32056147-32056370)
chr3 (235-456)||(6110971-6111205)
chr3 (235-456)||(13517689-13517914)
chr3 (235-354)||(13212210-13212331)
chr3 (235-453)||(23014448-23014668)
chr3 (312-419)||(16201180-16201288)
chr3 (382-456)||(13212331-13212405)
chr3 (395-456)||(8491428-8491489)
[»] chr1 (9 HSPs)
chr1 (235-456)||(18531615-18531839)
chr1 (233-456)||(27130486-27130711)
chr1 (235-456)||(18252912-18253135)
chr1 (235-456)||(27309655-27309877)
chr1 (235-456)||(9075979-9076202)
chr1 (235-451)||(16358142-16358360)
chr1 (312-407)||(36815748-36815843)
chr1 (235-284)||(36815911-36815960)
chr1 (372-404)||(27276691-27276723)
[»] scaffold0061 (1 HSPs)
scaffold0061 (235-456)||(5298-5521)
[»] chr4 (23 HSPs)
chr4 (237-456)||(10620410-10620631)
chr4 (237-456)||(10627492-10627713)
chr4 (235-456)||(4425717-4425940)
chr4 (235-456)||(8859074-8859297)
chr4 (235-456)||(28392244-28392467)
chr4 (235-456)||(19925837-19926060)
chr4 (238-456)||(869506-869726)
chr4 (235-456)||(19919608-19919831)
chr4 (235-456)||(5708219-5708442)
chr4 (235-456)||(18269955-18270178)
chr4 (235-456)||(5714854-5715078)
chr4 (235-456)||(18263094-18263317)
chr4 (235-430)||(8846085-8846282)
chr4 (235-456)||(55613590-55613813)
chr4 (235-456)||(26971345-26971570)
chr4 (275-424)||(5667202-5667354)
chr4 (372-456)||(26964592-26964676)
chr4 (312-456)||(47388032-47388176)
chr4 (235-280)||(5667385-5667430)
chr4 (235-289)||(10676851-10676905)
chr4 (235-289)||(10890491-10890545)
chr4 (253-347)||(35224456-35224553)
chr4 (235-284)||(47388244-47388294)
[»] scaffold0390 (2 HSPs)
scaffold0390 (235-456)||(6011-6234)
scaffold0390 (235-456)||(13027-13250)
[»] chr8 (8 HSPs)
chr8 (235-456)||(6095028-6095251)
chr8 (235-456)||(22172367-22172590)
chr8 (235-456)||(21941547-21941772)
chr8 (235-456)||(15327105-15327328)
chr8 (235-456)||(15507474-15507697)
chr8 (235-456)||(28548929-28549153)
chr8 (312-455)||(29230378-29230518)
chr8 (235-352)||(24643504-24643624)
[»] chr6 (15 HSPs)
chr6 (235-456)||(17690542-17690765)
chr6 (235-456)||(27380329-27380552)
chr6 (235-456)||(27470712-27470935)
chr6 (235-456)||(29309772-29309995)
chr6 (235-456)||(29316731-29316954)
chr6 (235-456)||(11652580-11652803)
chr6 (252-456)||(27297558-27297764)
chr6 (235-456)||(17683559-17683782)
chr6 (235-430)||(25536292-25536490)
chr6 (235-315)||(16558717-16558797)
chr6 (391-456)||(27278407-27278472)
chr6 (391-456)||(27303298-27303363)
chr6 (312-456)||(18336553-18336694)
chr6 (235-280)||(28755534-28755579)
chr6 (272-352)||(16393660-16393743)
[»] scaffold0234 (2 HSPs)
scaffold0234 (235-456)||(10314-10537)
scaffold0234 (235-456)||(1421-1646)
[»] scaffold1199 (1 HSPs)
scaffold1199 (237-456)||(4-230)
[»] chr7 (14 HSPs)
chr7 (235-456)||(11535164-11535387)
chr7 (235-456)||(11542082-11542305)
chr7 (235-456)||(18561913-18562138)
chr7 (235-456)||(29328666-29328893)
chr7 (235-456)||(12739424-12739647)
chr7 (235-456)||(12751741-12751964)
chr7 (237-456)||(15153352-15153573)
chr7 (235-438)||(11557193-11557392)
chr7 (235-398)||(24850719-24850884)
chr7 (357-456)||(9978834-9978933)
chr7 (360-456)||(2653090-2653186)
chr7 (272-406)||(13393080-13393217)
chr7 (235-289)||(13393006-13393060)
chr7 (293-341)||(9978782-9978832)
[»] chr5 (6 HSPs)
chr5 (235-456)||(19713602-19713823)
chr5 (235-456)||(24694562-24694783)
chr5 (235-456)||(24701326-24701547)
chr5 (235-456)||(19706274-19706497)
chr5 (235-456)||(18565562-18565791)
chr5 (400-456)||(938655-938710)
[»] chr2 (5 HSPs)
chr2 (235-456)||(22790935-22791158)
chr2 (235-420)||(21329380-21329569)
chr2 (371-456)||(41664786-41664871)
chr2 (321-456)||(18620805-18620941)
chr2 (235-285)||(18620681-18620730)
[»] scaffold0433 (1 HSPs)
scaffold0433 (235-456)||(7989-8213)
[»] scaffold0220 (1 HSPs)
scaffold0220 (235-456)||(19194-19418)
[»] scaffold0063 (1 HSPs)
scaffold0063 (235-456)||(6404-6633)
[»] scaffold0008 (1 HSPs)
scaffold0008 (235-440)||(229505-229716)
[»] scaffold0386 (1 HSPs)
scaffold0386 (102-230)||(2856-2986)
[»] scaffold0032 (1 HSPs)
scaffold0032 (312-453)||(107352-107494)
[»] scaffold0502 (1 HSPs)
scaffold0502 (312-456)||(10-151)
[»] scaffold1303 (1 HSPs)
scaffold1303 (406-456)||(1083-1132)


Alignment Details
Target: chr3 (Bit Score: 289; Significance: 1e-162; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 98 - 456
Target Start/End: Original strand, 18537740 - 18538100
Alignment:
Q  98 attattttgtgaaacctacttttcgaattattccaccttttacctaagatccattataacctaaacaacgtatttatactgnnnnnnngaattgaaataa 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||| ||||||    
T  18537740 attattttgtgaaacctacttttcgaattattccaccttttacctaagatccattataacctaaacaacgcatttatactgtttttttgaattaaaataa 18537839  T
Q  198 aaagatatatttatttgtgcatgtttttaaagatccattattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagt 297  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||||| |||||    
T  18537840 aaatatatatttatttgtgcatgtttttaaagatccattattatttaatttaagtaaaatagagaaacgcggttcaccgtaaggtacagtgtagttaagt 18537939  T
Q  298 gttgtcttgctgacc--acaagtgattctataaatagaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtg 395  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18537940 gttgtcttgctgaccgcacaagtgattctataaatagaactcttgtgctgaagcattatgaaccttttgtgagtgcttaacctaattcacaaaagttgtg 18538039  T
Q  396 aaatcctagccgtcgctctctaaaccttggtctctctgaatctccgtttgaattggctagc 456  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18538040 aaaccctagccgtcgctctctaaaccttggtctctctgaatctccgtttgaattggctagc 18538100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 10578657 - 10578434
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  10578657 ttattatttaatttaccaaaaatagagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 10578558  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  10578557 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 10578458  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||||| |||| ||||||||||||    
T  10578457 gaatcttcgttggaattggctagc 10578434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 15341544 - 15341321
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  15341544 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 15341445  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  15341444 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 15341345  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||||| |||| ||||||||||||    
T  15341344 gaatcttcgttggaattggctagc 15341321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 15356911 - 15356688
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  ||| |||||||||| || |||||  |||||||||||||||||    
T  15356911 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaattgttgtcttgttgtccacacaagtgattctataaatag 15356812  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  15356811 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 15356712  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||||| |||| ||||||||||||    
T  15356711 gaatcttcgttggaattggctagc 15356688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 235 - 453
Target Start/End: Complemental strand, 1646821 - 1646601
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || |  |||||||||||||||||||||||  |||||||||||||||||    
T  1646821 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgcatttaagtgttgtcttgctgaccacacaagtgattctataaatag 1646722  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||  ||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||| ||||| |    
T  1646721 aacccttgtgttgaagcattactaattttttgtgagtgcttaacctaattaacaaaagttgtgaaaccctagtcgtcgctctctaaaccttgttctcttt 1646622  T
Q  433 gaatctccgtttgaattggct 453  Q
    ||||||||||| |||||||||    
T  1646621 gaatctccgttagaattggct 1646601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 15600209 - 15599986
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  15600209 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtatggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 15600110  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| |||| |||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  15600109 aacccttgtgttgaaacattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 15600010  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||||| |||| ||||||||||||    
T  15600009 gaatcttcgttggaattggctagc 15599986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 15606754 - 15606531
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| | ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  15606754 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtatggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 15606655  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| |||| |||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  15606654 aacccttgtgttgaaacattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 15606555  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||||| |||| ||||||||||||    
T  15606554 gaatcttcgttggaattggctagc 15606531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 17197073 - 17196850
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgacca--caagtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||  |||||||||||||||||||||  |||||||||||||||||||    
T  17197073 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtactgtgtatttaagtgttgtcttgctgaccagacaagtgattctataaatag 17196974  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||  ||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||||| ||||| |    
T  17196973 aacccttgtgttgaagcattactaactttttgtttgtgcttaacttaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctcttt 17196874  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  17196873 gaatctccgttggaattggctagc 17196850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 10571892 - 10571668
Alignment:
Q  235 ttattatttaatttacgaaaaa-tagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaata 331  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||  ||||  |||||||||||||| || |||||  ||||||||||||||||    
T  10571892 ttattatttaatttaccaaaaaatagagaaacgcggttcaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaata 10571793  T
Q  332 gaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctc 431  Q
    |||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||    
T  10571792 gaacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctc 10571693  T
Q  432 tgaatctccgtttgaattggctagc 456  Q
    ||||||| |||| |||||| |||||    
T  10571692 tgaatcttcgttggaattgactagc 10571668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 235 - 433
Target Start/End: Complemental strand, 17780443 - 17780243
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| ||||||||  |||||||||||||||||    
T  17780443 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgaccacacaagtgattctataaatag 17780344  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||| ||| |||||||    
T  17780343 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctct 17780244  T
Q  433 g 433  Q
    |    
T  17780243 g 17780243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 235 - 433
Target Start/End: Complemental strand, 19081744 - 19081544
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| ||||||||  |||||||||||||||||    
T  19081744 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgaccacacaagtgattctataaatag 19081645  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||| ||| |||||||    
T  19081644 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctct 19081545  T
Q  433 g 433  Q
    |    
T  19081544 g 19081544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 16481783 - 16481560
Alignment:
Q  235 ttattatttaatttacgaaaaata-gagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaata 331  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||||| || |||||  ||||||||||||||||    
T  16481783 ttattatttaatttacgaaaaataagagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaata 16481684  T
Q  332 gaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctc 431  Q
    |||| |||||| ||||||||||   || ||||||||||| ||||||||||||||||||||||||||| |  ||||| |||||||||||||||| ||||||    
T  16481683 gaacccttgtgttgaagcattacttactttttgtgagtgcttaacctaattcacaaaagttgtgaaa-ctcagccgccgctctctaaaccttgttctctc 16481585  T
Q  432 tgaatctccgtttgaattggctagc 456  Q
    ||||||| |||| ||||||||||||    
T  16481584 tgaatcttcgttggaattggctagc 16481560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 17137260 - 17137484
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccac---aagtgattctataaata 331  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  ||||||||||||||||||||||   |||||||| ||||||||    
T  17137260 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaaagtgattttataaata 17137359  T
Q  332 gaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctc 431  Q
    |||| |||||| ||||||||||  ||| ||||||||||| ||||||||||| |||||||||||||||  ||||  | | |||||||||| ||| |||||     
T  17137360 gaacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattaacaaaagttgtgaaacactagttgcctctctctaaactttgttctctt 17137459  T
Q  432 tgaatctccgtttgaattggctagc 456  Q
    |||||||||||| ||||||||||||    
T  17137460 tgaatctccgttggaattggctagc 17137484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 32056370 - 32056147
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    ||||||||||||||||||||||||||||||||| || ||| |||||||||  ||||  |||||||||||||||||| ||||  |||||||||||||||||    
T  32056370 ttattatttaatttacgaaaaatagagaaacgcagtccactgtaaggtacagtgtatttaagtgttgtcttgctgatcacacaagtgattctataaatag 32056271  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| | ||||||||  ||| |||||||| || ||||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||    
T  32056270 aacccttgtgttcaagcattactaactttttgtgattgcttaacctaattcacaaaagttgtgaagccctagccgccgctctctaaaccttgttctctct 32056171  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||| ||||||  |||||||||||    
T  32056170 gaatttccgttgaaattggctagc 32056147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 6110971 - 6111205
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgac--cacaagtgattctataaatag 332  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||  |||||||||||||| || |  |||||||||||||||||||||    
T  6110971 ttattatttaatttaccaaaaatagagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 6111070  T
Q  333 aactcttgtgctgaagcatt-----------atgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaacc 421  Q
    ||| |||||| |||||||||           |  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||     
T  6111071 aacccttgtgttgaagcattaccaaaaaaaaaaaaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaact 6111170  T
Q  422 ttggtctctctgaatctccgtttgaattggctagc 456  Q
    ||| ||||||||||||| |||| ||||||||||||    
T  6111171 ttgttctctctgaatcttcgttggaattggctagc 6111205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 13517689 - 13517914
Alignment:
Q  235 ttattatttaatttacgaaaaa--tagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaat 330  Q
    ||||||||||||||||||||||  |||||||||||||| |||||||||||||| ||||  |||||||||| ||||||||||||  |||  ||||||||||    
T  13517689 ttattatttaatttacgaaaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgttttgctgaccacacaagtatttctataaat 13517788  T
Q  331 agaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctct 430  Q
    ||||| |||||| |||||||| |  ||| |  |||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||| ||| |||||    
T  13517789 agaacccttgtgttgaagcatgactaacttaatgtgagtgctaaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaacattgttctct 13517888  T
Q  431 ctgaatctccgtttgaattggctagc 456  Q
     |||||||||||| ||||||||||||    
T  13517889 ttgaatctccgttggaattggctagc 13517914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 235 - 354
Target Start/End: Original strand, 13212210 - 13212331
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctg--accacaagtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| ||    |||||||||||||||||||||    
T  13212210 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgttcacacaagtgattctataaatag 13212309  T
Q  333 aactcttgtgctgaagcattat 354  Q
    ||| |||||| |||||||||||    
T  13212310 aacccttgtgttgaagcattat 13212331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 235 - 453
Target Start/End: Complemental strand, 23014668 - 23014448
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgac--cacaagtgattctataaatag 332  Q
    ||||||||||||||||||||||||||||||||| ||  || |||||||| ||||||  |||||| |   ||||||||  |||||||| ||||||||||||    
T  23014668 ttattatttaatttacgaaaaatagagaaacgcagtctactgtaaggtatgatgtatttaagtggttggttgctgaccacacaagtggttctataaatag 23014569  T
Q  333 aactcttgtgctgaagcattatgaaccttttg--tg-agtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctc 429  Q
    ||| |||||||||||||||||  ||| |||||  || |    ||||||||||||  |||||||  |||| |||||||| ||||||||||||| | |||||    
T  23014568 aacccttgtgctgaagcattagtaactttttggttgaaacacttaacctaattc-taaaagtt-agaaaccctagccgccgctctctaaacc-tagtctc 23014472  T
Q  430 tctgaatctccgtttgaattggct 453  Q
    |||||||||| ||| |||||||||    
T  23014471 tctgaatctctgttggaattggct 23014448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 419
Target Start/End: Original strand, 16201180 - 16201288
Alignment:
Q  312 cacaagtgattctataaatagaactcttgtgctgaagcattatgaaccttttgtga-gtgtttaacctaattcacaaaagttgtgaaatcctagccgtcg 410  Q
    ||||||||||||||||||| |||| |||||||||||| |||||  || |||  ||| ||| ||||||||||||||||||||||||||| |||||||| ||    
T  16201180 cacaagtgattctataaattgaacccttgtgctgaagtattatagacttttgttgaagtgcttaacctaattcacaaaagttgtgaaaccctagccgccg 16201279  T
Q  411 ctctctaaa 419  Q
    |||||||||    
T  16201280 ctctctaaa 16201288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 382 - 456
Target Start/End: Original strand, 13212331 - 13212405
Alignment:
Q  382 tcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctctgaatctccgtttgaattggctagc 456  Q
    ||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||| |||| ||||||||||||    
T  13212331 tcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctctgaatcttcgttggaattggctagc 13212405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 395 - 456
Target Start/End: Original strand, 8491428 - 8491489
Alignment:
Q  395 gaaatcctagccgtcgctctctaaaccttggtctctctgaatctccgtttgaattggctagc 456  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||    
T  8491428 gaaaccctagccgccgctctctaaaccttgttctctctgaatctccgttggaattggctagc 8491489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 5e-79; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 18531839 - 18531615
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||  |||||||||||||||||||||||  |||||||||||||||||    
T  18531839 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatag 18531740  T
Q  333 aactcttgtgctgaagcattatgaacctttt-gtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctc 431  Q
    ||| |||||| |||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||  ||||||    
T  18531739 aacccttgtgttgaagcattacgaacctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctc 18531640  T
Q  432 tgaatctccgtttgaattggctagc 456  Q
    |||||||||||| ||||||||||||    
T  18531639 tgaatctccgttggaattggctagc 18531615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 233 - 456
Target Start/End: Complemental strand, 27130711 - 27130486
Alignment:
Q  233 cattattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaat 330  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||  |||||||||||||||||||||||  |||||||||||||||    
T  27130711 cattattatttaatttacgaaaaatagagaaacgcggtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaat 27130612  T
Q  331 agaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctct 430  Q
    ||||| |||||| ||||||||||  ||| |||||| |||| ||||||||||||||||||||||||||| |||||||  |||||||||||||||| |||||    
T  27130611 agaacccttgtgttgaagcattactaactttttgtaagtgcttaacctaattcacaaaagttgtgaaaccctagcctccgctctctaaaccttgttctct 27130512  T
Q  431 ctgaatctccgtttgaattggctagc 456  Q
    ||||||||||||| ||||||||||||    
T  27130511 ctgaatctccgttggaattggctagc 27130486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 18252912 - 18253135
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  18252912 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 18253011  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  18253012 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 18253111  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||||| |||| ||||||||||||    
T  18253112 gaatcttcgttggaattggctagc 18253135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 27309877 - 27309655
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||  |||||||||||||||| ||||||  |||||||||||||||||    
T  27309877 ttattatttaatttatgaaaaatagagaaacgcggtccaccgtaaggtacgatgtatttaagtgttgtcttgctaaccacacaagtgattctataaatag 27309778  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||| ||||||||||||||| |||||||| |||||||||||||||| ||||| |    
T  27309777 aac-cttgtgttgaagcattactaactttttgtgagtgcttaacctaattaacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctcttt 27309679  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||||||||||  |||||||||||    
T  27309678 gaatctccgttgaaattggctagc 27309655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 9076202 - 9075979
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    ||||||||||||||| |||||||||||||||||| | |||||||||||| | ||||  |||||||||||||||||||||||  |  ||||||||||||||    
T  9076202 ttattatttaatttatgaaaaatagagaaacgcgatccaccgtaaggtatgctgtatttaagtgttgtcttgctgaccacacaaacgattctataaatag 9076103  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||| | ||||| |    
T  9076102 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaacctcgttctcttt 9076003  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  9076002 gaatctccgttggaattggctagc 9075979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 235 - 451
Target Start/End: Complemental strand, 16358360 - 16358142
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||  |||||||||||||||||||||||  | |||||||||||||||    
T  16358360 ttattatttaatttacgaaaaatagggaaacgcggtccaccgtaaggtacaatgtatttaagtgttgtcttgctgaccacacaaatgattctataaatag 16358261  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| | |||| |||||||||||||| ||| ||||| |    
T  16358260 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccatagctgtcgctctctaaacgttgttctcttt 16358161  T
Q  433 gaatctccgtttgaattgg 451  Q
    ||||| ||||| |||||||    
T  16358160 gaatccccgttggaattgg 16358142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 312 - 407
Target Start/End: Complemental strand, 36815843 - 36815748
Alignment:
Q  312 cacaagtgattctataaatagaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccg 407  Q
    |||||||||||||||||||||||| |||||| |||||||| |   || | ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  36815843 cacaagtgattctataaatagaacccttgtgttgaagcatgacagacttcttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccg 36815748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 36815960 - 36815911
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtac 284  Q
    |||||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  36815960 ttattatttaatttacgaaaaatagagaaatgcggtccaccataaggtac 36815911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 404
Target Start/End: Complemental strand, 27276723 - 27276691
Alignment:
Q  372 ttaacctaattcacaaaagttgtgaaatcctag 404  Q
    ||||||||||||||||||||||||||| |||||    
T  27276723 ttaacctaattcacaaaagttgtgaaaccctag 27276691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 149; Significance: 2e-78; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 5521 - 5298
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  5521 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 5422  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  5421 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 5322  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  5321 gaatctccgttggaattggctagc 5298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 3e-77; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 237 - 456
Target Start/End: Complemental strand, 10620631 - 10620410
Alignment:
Q  237 attatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatagaa 334  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||  |||||||||||||||||||    
T  10620631 attatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaa 10620532  T
Q  335 ctcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctctga 434  Q
    | |||||| ||||||||||   || ||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  10620531 cccttgtgttgaagcattactgactttttgtgagtgcttgacctaattcacaaaagttgtgaaaccctagccgtcgctctctaaaccttgttctctctga 10620432  T
Q  435 atctccgtttgaattggctagc 456  Q
    ||||| ||| ||||||||||||    
T  10620431 atctctgttggaattggctagc 10620410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 237 - 456
Target Start/End: Complemental strand, 10627713 - 10627492
Alignment:
Q  237 attatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatagaa 334  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||  |||||||||||||||||||    
T  10627713 attatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatagaa 10627614  T
Q  335 ctcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctctga 434  Q
    | |||||| ||||||||||   || ||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  10627613 cccttgtgttgaagcattactgactttttgtgagtgcttgacctaattcacaaaagttgtgaaaccctagccgtcgctctctaaaccttgttctctctga 10627514  T
Q  435 atctccgtttgaattggctagc 456  Q
    |||||| || ||||||||||||    
T  10627513 atctccattggaattggctagc 10627492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 4425940 - 4425717
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||  |||||||||||||||||    
T  4425940 ttattatttaatttatgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatag 4425841  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| |||||| |||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||| |    
T  4425840 aacccttgtgttgaagcattactaactttttgtaagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctcttt 4425741  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  4425740 gaatctccgttggaattggctagc 4425717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 8859074 - 8859297
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  8859074 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 8859173  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  8859174 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 8859273  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||||| |||| ||||||||||||    
T  8859274 gaatcttcgttggaattggctagc 8859297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 28392467 - 28392244
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||  |||||||||||||||||    
T  28392467 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatag 28392368  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||| | |||||| ||||||||  |||||||    
T  28392367 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctttaaaccttcttctctct 28392268  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  28392267 gaatctccgttggaattggctagc 28392244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 19926060 - 19925837
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  19926060 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaagatacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 19925961  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  | | ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||||    
T  19925960 aacccttgtgttgaagcattactacctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 19925861  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  19925860 gaatctccgttggaattggctagc 19925837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 238 - 456
Target Start/End: Original strand, 869506 - 869726
Alignment:
Q  238 ttatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatagaac 335  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  ||||||||||||||||||||    
T  869506 ttatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaac 869605  T
Q  336 tcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctctgaa 435  Q
     |||||| |||| |||||  ||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||| | | ||||||||||    
T  869606 ccttgtgttgaaacattactaaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaacatagttctctctgaa 869705  T
Q  436 tctccgtttgaattggctagc 456  Q
    |||||||| ||||||||||||    
T  869706 tctccgttggaattggctagc 869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 19919831 - 19919608
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  19919831 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaagatacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 19919732  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  | | ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||||    
T  19919731 aacccttgtgttgaagcattactacctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 19919632  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||||||||||  |||||||||||    
T  19919631 gaatctccgttgaaattggctagc 19919608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 5708219 - 5708442
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  5708219 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 5708318  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| |||| |||||  ||||||||||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||| | | |||||||    
T  5708319 aacccttgtgttgaaacattactaaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgctgctctctaaacgtagttctctct 5708418  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  5708419 gaatctccgttggaattggctagc 5708442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 18269955 - 18270178
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  18269955 ttattgtttaacttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 18270054  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| |||| ||| |  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  18270055 aacccttgtgttgaaacatgactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 18270154  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  18270155 gaatctccgttggaattggctagc 18270178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 5714854 - 5715078
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  5714854 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 5714953  T
Q  333 aactcttgtgctgaagcattatgaaccttttgt-gagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctc 431  Q
    ||| |||||| |||| |||||  |||||||||| ||||| ||||||||||||||||||||||||||| |||||||| |||||||||||| | | ||||||    
T  5714954 aacccttgtgttgaaacattactaaccttttgttgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaacgtagttctctc 5715053  T
Q  432 tgaatctccgtttgaattggctagc 456  Q
    |||||||||||| ||||||||||||    
T  5715054 tgaatctccgttggaattggctagc 5715078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 18263094 - 18263317
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||||||  ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  18263094 ttattgtttaacttacgaaaaatagagaaacgcggtccaccgtaaggtacagtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 18263193  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| |||| ||| |  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  18263194 aacccttgtgttgaaacatgactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 18263293  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  18263294 gaatctccgttggaattggctagc 18263317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 235 - 430
Target Start/End: Original strand, 8846085 - 8846282
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||    
T  8846085 ttattatttaatttacgaaaaatagagaaacgcggtccaacgtaaggtacgatgtatttaagtgttgtcttgctgaccacacaagtgattctataaatag 8846184  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctct 430  Q
    ||| |||||  ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||| ||| |||||    
T  8846185 aacccttgtattgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctct 8846282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 55613590 - 55613813
Alignment:
Q  235 ttattatttaatttacgaaaaata-gagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaata 331  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||||| || |||||  ||||||||||||||||    
T  55613590 ttattatttaatttacgaaaaataagagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaata 55613689  T
Q  332 gaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctc 431  Q
    |||| |||||| ||||||||||   || ||||||||||| ||||||||||||||||||||||||||| |  ||||| |||||||||||||||| ||||||    
T  55613690 gaacccttgtgttgaagcattacttactttttgtgagtgcttaacctaattcacaaaagttgtgaaa-ctcagccgccgctctctaaaccttgttctctc 55613788  T
Q  432 tgaatctccgtttgaattggctagc 456  Q
    ||||||| |||| ||||||||||||    
T  55613789 tgaatcttcgttggaattggctagc 55613813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 26971345 - 26971570
Alignment:
Q  235 ttattatttaatttacgaaaaa-tagagaaa-cgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaat 330  Q
    ||||||||||||||| |||||| |||||||| |||||| |||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||    
T  26971345 ttattatttaatttaggaaaaaatagagaaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaat 26971444  T
Q  331 agaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctct 430  Q
    ||||| |||||| |||| |||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  26971445 agaacccttgtgttgaaacattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctct 26971544  T
Q  431 ctgaatctccgtttgaattggctagc 456  Q
    |||||||| |||| ||||||||||||    
T  26971545 ctgaatcttcgttggaattggctagc 26971570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 275 - 424
Target Start/End: Complemental strand, 5667354 - 5667202
Alignment:
Q  275 cgtaaggtacgatgtagctaagtg-ttgtcttgctgaccaca--agtgattctataaatagaactcttgtgctgaagcattatgaaccttttgtgagtgt 371  Q
    ||||||||||| ||||  |||||| ||| |||||||||||||  |||||||||||||||||||| |||||||||||||||||   |  |||||||||||     
T  5667354 cgtaaggtacggtgtacttaagtgcttggcttgctgaccacacaagtgattctataaatagaacccttgtgctgaagcattacatattttttgtgagtgc 5667255  T
Q  372 ttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttg 424  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||||||||||||    
T  5667254 ttaaccttattcacaaaagttgtgaaaccctagccgccgctctctaaaccttg 5667202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 372 - 456
Target Start/End: Original strand, 26964592 - 26964676
Alignment:
Q  372 ttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctctgaatctccgtttgaattggctagc 456  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  26964592 ttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgaatcttcgttggaattggctagc 26964676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 312 - 456
Target Start/End: Complemental strand, 47388176 - 47388032
Alignment:
Q  312 cacaagtgattctataaatagaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgc 411  Q
    |||||||||||  |||||||||||  |||||||||| |||||   || |||  |||||| |||||||||||||||||||  |||||| |||||||| | |    
T  47388176 cacaagtgatttgataaatagaaccattgtgctgaaacattactgacttttgttgagtgcttaacctaattcacaaaaggcgtgaaaccctagccgccac 47388077  T
Q  412 tctctaaaccttggtctctctgaatctccgtttgaattggctagc 456  Q
    ||||||||||||  |||| ||||||||||||| ||||||||||||    
T  47388076 tctctaaacctttttctcactgaatctccgttggaattggctagc 47388032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 5667430 - 5667385
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaag 280  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  5667430 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaag 5667385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 10676905 - 10676851
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgt 289  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||||||| ||||    
T  10676905 ttattatttaatttatgaaaaatagagaaatgcggtccaccgtaaggtacaatgt 10676851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 10890545 - 10890491
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgt 289  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||||||| ||||    
T  10890545 ttattatttaatttatgaaaaatagagaaatgcggtccaccgtaaggtacaatgt 10890491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 253 - 347
Target Start/End: Original strand, 35224456 - 35224553
Alignment:
Q  253 aaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtg-ttgtcttgctga--ccacaagtgattctataaatagaactcttgtgctgaa 347  Q
    |||||||||||||||||| |||||||||||||| ||||  |||||| ||| |||  |||   |||||||| ||||||||||||||| |||||||||||    
T  35224456 aaaatagagaaacgcggtccaccgtaaggtacggtgtacttaagtgcttgactttatgagcacacaagtggttctataaatagaacccttgtgctgaa 35224553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 47388294 - 47388244
Alignment:
Q  235 ttattatttaatttacgaaaaatagag-aaacgcggttcaccgtaaggtac 284  Q
    |||||||||||||||| |||||||||| ||||||||| |||||||||||||    
T  47388294 ttattatttaatttacaaaaaatagagaaaacgcggtccaccgtaaggtac 47388244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 145; Significance: 5e-76; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 6234 - 6011
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgacca--caagtgattctataaatag 332  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||  |||||||||||||| || |||  |||||||||||||||||||    
T  6234 ttattatttaatttaccaaaaatagagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccatacaagtgattctataaatag 6135  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  6134 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 6035  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||||| |||| ||||||||||||    
T  6034 gaatcttcgttggaattggctagc 6011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 13250 - 13027
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  13250 ttattatttaatttaccaaaaatagagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 13151  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| |||||||||||||||| |||||||||| |||||||| |||||||||||||||| |||||||    
T  13150 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaacagttgtgaaaccctagccgccgctctctaaaccttgttctctct 13051  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||||| |||| ||||||||||||    
T  13050 gaatcttcgttggaattggctagc 13027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 5e-76; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 6095028 - 6095251
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||  |||||||||||||||||    
T  6095028 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatag 6095127  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||||    
T  6095128 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 6095227  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||||| | || ||||||||||||    
T  6095228 gaatcttcattggaattggctagc 6095251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 22172367 - 22172590
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  22172367 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 22172466  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  || |||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  22172467 aacccttgtgttgaagcattactaatcttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 22172566  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||||| |||| ||||||||||||    
T  22172567 gaatcttcgttggaattggctagc 22172590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 21941547 - 21941772
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| || |||||  |||||||||||||||||    
T  21941547 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 21941646  T
Q  333 aactcttgtgctgaagcattatgaacc--ttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctct 430  Q
    ||| |||||| ||||||||||  ||||  ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  21941647 aacccttgtgttgaagcattactaaccctttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctct 21941746  T
Q  431 ctgaatctccgtttgaattggctagc 456  Q
    |||||||| |||| ||||| ||||||    
T  21941747 ctgaatcttcgttggaattagctagc 21941772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 15327105 - 15327328
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||  |||||||||||||||||||||||  |||||||||||||||||    
T  15327105 ttattatttaatttacgaaaaatagagaaacgcggtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatag 15327204  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    |||  ||||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||| |||||| | ||||||||||| |||| ||||| |    
T  15327205 aacctttgtgttgaagcattactaaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctctaaaacttgttctcttt 15327304  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  15327305 gaatctccgttggaattggctagc 15327328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 15507474 - 15507697
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||  |||||||||||||||||||||||  |||||||||||||||||    
T  15507474 ttattatttaatttacgaaaaatagagaaacgcggtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatag 15507573  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    |||  ||||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||| |||||| | ||||||||||| |||| ||||| |    
T  15507574 aacctttgtgttgaagcattactaaccttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctctaaaacttgttctcttt 15507673  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  15507674 gaatctccgttggaattggctagc 15507697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 28548929 - 28549153
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgac--cacaagtgattctataaatag 332  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||  || ||||||||||||||||||    
T  28548929 ttattatttgatttacgaaaaatagagaaacgcggtccaccgtaaggtacgatgtatttaagtgttgtcttgctgactacataagtgattctataaatag 28549028  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcac-aaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctc 431  Q
    ||| |||||| |||||||| |  ||| ||||||||||| |||||||||||||| ||||||||||||| |||||||| |||||||||||||| | ||||||    
T  28549029 aacccttgtgttgaagcatgactaacattttgtgagtgcttaacctaattcacaaaaagttgtgaaaccctagccgccgctctctaaacctggttctctc 28549128  T
Q  432 tgaatctccgtttgaattggctagc 456  Q
    |||||||| ||| ||||||||||||    
T  28549129 tgaatctctgttggaattggctagc 28549153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 312 - 455
Target Start/End: Original strand, 29230378 - 29230518
Alignment:
Q  312 cacaagtgattctataaatagaactcttgtgctgaagcatta-tgaaccttttgtga--gtgtttaacctaattcacaaaagttgtgaaatcctagccgt 408  Q
    ||||||||||||||||||||||||    ||| |||||||||| |||  ||||||| |  ||| ||||||||| | ||||||||||||||| ||||||||     
T  29230378 cacaagtgattctataaatagaac----gtgatgaagcattactga--cttttgttaaagtgcttaacctaactaacaaaagttgtgaaaccctagccgc 29230471  T
Q  409 cgctctctaaaccttggtctctctgaatctccgtttgaattggctag 455  Q
    |||||  ||||||||| ||||||| |||||||||| |||||||||||    
T  29230472 cgctccttaaaccttgttctctcttaatctccgttggaattggctag 29230518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 352
Target Start/End: Original strand, 24643504 - 24643624
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtg-ttgtcttgctgaccaca--agtgattctataaata 331  Q
    ||||||||||||||| ||||||||||| || | ||| |||||||| ||||| ||||  |||||| ||| |||| ||| ||||  |||| |||||||||||    
T  24643504 ttattatttaatttaagaaaaatagagtaatgaggtccaccgtaaagtacggtgtatttaagtgattggcttgttgatcacacaagtggttctataaata 24643603  T
Q  332 gaactcttgtgctgaagcatt 352  Q
    |||| ||| ||||||||||||    
T  24643604 gaacccttatgctgaagcatt 24643624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 145; Significance: 5e-76; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 17690765 - 17690542
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  17690765 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 17690666  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  17690665 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 17690566  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    |||||| |||| ||||||||||||    
T  17690565 gaatcttcgttggaattggctagc 17690542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 27380552 - 27380329
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  27380552 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaagtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 27380453  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| |||| |||||| ||||||| ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  27380452 aacccttgtgttgaaacattattaacctttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 27380353  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  27380352 gaatctccgttggaattggctagc 27380329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 27470935 - 27470712
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  27470935 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaagtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 27470836  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| |||| |||||| ||||||| ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  27470835 aacccttgtgttgaaacattattaacctttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 27470736  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  27470735 gaatctccgttggaattggctagc 27470712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 29309772 - 29309995
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  29309772 ttattatttaatttacgaaaaatagagaaatgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 29309871  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| | |||||    
T  29309872 aacccttgtgttgaagcattactaacttttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttatctct 29309971  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  29309972 gaatctccgttggaattggctagc 29309995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 29316731 - 29316954
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  29316731 ttattatttaatttacgaaaaatagagaaatgcgattcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 29316830  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| | |||||    
T  29316831 aacccttgtgttgaagcattactaacttttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttatctct 29316930  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||| ||| ||||||||||||    
T  29316931 gaatctctgttggaattggctagc 29316954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 11652580 - 11652803
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||  |||||||||||||||||    
T  11652580 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatag 11652679  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||  |||||||| || | ||||||||||||||||||||||||| |||||  | |||||||||||||||  ||| |||    
T  11652680 aacccttgtgttgaagcattactaattttttgtgaatgctgaacctaattcacaaaagttgtgaaaccctagatgccgctctctaaaccttcttctttct 11652779  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  11652780 gaatctccgttggaattggctagc 11652803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 252 - 456
Target Start/End: Original strand, 27297558 - 27297764
Alignment:
Q  252 aaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatagaactcttgtgctgaagc 349  Q
    |||||||||||||||||||||||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||||| |||||| ||||||    
T  27297558 aaaaatagagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatagaacccttgtgttgaagc 27297657  T
Q  350 attatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctctgaatctccgtttgaatt 449  Q
    ||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||| |||| |||||    
T  27297658 attactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctctgaatcttcgttggaatt 27297757  T
Q  450 ggctagc 456  Q
    |||||||    
T  27297758 ggctagc 27297764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 17683782 - 17683559
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    ||||||||||||||||||||| ||||||||||| || |||||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||    
T  17683782 ttattatttaatttacgaaaa-tagagaaacgcagtccaccgtaaggtacgatgtatttaagtgttgtcttgctgaccacacaagtgattctataaatag 17683684  T
Q  333 aactcttgtgctgaagcattatgaacctttt-gtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctc 431  Q
    ||| |||||| ||||||||||  |||||||| ||||||| ||||| ||||||||||||||||||||| ||||| |  |||||||||||| ||| |||||     
T  17683683 aacccttgtgttgaagcattactaacctttttgtgagtgcttaacttaattcacaaaagttgtgaaaccctagtcaccgctctctaaacattgttctctt 17683584  T
Q  432 tgaatctccgtttgaattggctagc 456  Q
    |||||||||||| ||||||||||||    
T  17683583 tgaatctccgttggaattggctagc 17683559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 235 - 430
Target Start/End: Complemental strand, 25536490 - 25536292
Alignment:
Q  235 ttattatttaatttacgaaaaa-tagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaata 331  Q
    |||||||||||||||||||||| |||||||||||| |  ||||||||||||  ||||  ||||||||||||| |||| ||||  ||||||||||||||||    
T  25536490 ttattatttaatttacgaaaaaatagagaaacgcgatcgaccgtaaggtacagtgtatttaagtgttgtctttctgatcacacaagtgattctataaata 25536391  T
Q  332 gaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctct 430  Q
    |||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| || ||||| |||||||||||||||| |||||    
T  25536390 gaacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaacccaagccgccgctctctaaaccttgttctct 25536292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 16558797 - 16558717
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca 315  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||| |||| | ||  |||||||||||||||||||||||    
T  16558797 ttattatttaatttatgaaaaatagagaaacgcggtccaccgtaagatacggtatatttaagtgttgtcttgctgaccaca 16558717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 27278407 - 27278472
Alignment:
Q  391 ttgtgaaatcctagccgtcgctctctaaaccttggtctctctgaatctccgtttgaattggctagc 456  Q
    |||||||| |||||||| |||||||||||| ||| ||||||||||||| |||| ||||||||||||    
T  27278407 ttgtgaaaccctagccgccgctctctaaactttgttctctctgaatcttcgttggaattggctagc 27278472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 27303298 - 27303363
Alignment:
Q  391 ttgtgaaatcctagccgtcgctctctaaaccttggtctctctgaatctccgtttgaattggctagc 456  Q
    |||||||| |||||||| |||||||||||| ||| ||||||||||||| |||| ||||||||||||    
T  27303298 ttgtgaaaccctagccgccgctctctaaactttgttctctctgaatcttcgttggaattggctagc 27303363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 456
Target Start/End: Original strand, 18336553 - 18336694
Alignment:
Q  312 cacaagtgattctataaatagaactcttgtgctgaagcat-tatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcg 410  Q
    |||||||| |||||||||||||||||||||||| |||||| |  ||   |||||  |||| || |||||||||| |||||| ||||||   || | | ||    
T  18336553 cacaagtggttctataaatagaactcttgtgctaaagcatgtccga---ttttg-aagtgctttacctaattcataaaagtggtgaaacaatatctgccg 18336648  T
Q  411 ctctctaaaccttggtctctctgaatctccgtttgaattggctagc 456  Q
    |||||||||||||| |||||||| |||||||||  | |||||||||    
T  18336649 ctctctaaaccttgttctctctggatctccgttgaagttggctagc 18336694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 28755579 - 28755534
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaag 280  Q
    |||||||||||||||||||||||||||||| | |||| ||||||||    
T  28755579 ttattatttaatttacgaaaaatagagaaatgtggtttaccgtaag 28755534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 16393743 - 16393660
Alignment:
Q  272 caccgtaaggtacgatgtagctaagtg-ttgtcttgctgac--cacaagtgattctataaatagaactcttgtgctgaagcatt 352  Q
    |||||||||||||| ||||  |||||| ||| |||| ||||  |||||||| ||||||||||||||| ||||||||||| ||||    
T  16393743 caccgtaaggtacggtgtatttaagtgattgacttgatgacgacacaagtggttctataaatagaacacttgtgctgaaacatt 16393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 141; Significance: 1e-73; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 10537 - 10314
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  10537 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 10438  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| |||| ||| |  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  10437 aacccttgtgttgaaacatgactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 10338  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  10337 gaatctccgttggaattggctagc 10314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 1646 - 1421
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaa--t 330  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  ||||||||||||||  |    
T  1646 ttattgtttaacttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaaaat 1547  T
Q  331 agaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctct 430  Q
    ||||| |||||| |||| ||| |  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||    
T  1546 agaacccttgtgttgaaacatgactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctct 1447  T
Q  431 ctgaatctccgtttgaattggctagc 456  Q
    ||||||||||||| ||||||||||||    
T  1446 ctgaatctccgttggaattggctagc 1421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1199 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold1199
Description:

Target: scaffold1199; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 237 - 456
Target Start/End: Original strand, 4 - 230
Alignment:
Q  237 attatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatagaa 334  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||  ||| |||||||||||||||    
T  4 attatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagttattctataaatagaa 103  T
Q  335 ctcttgtgctgaagcattatgaaccttttg-----tgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctc 429  Q
    | |||||| ||||||||||||||| |||||     |||||| ||||||||||||||||||||||||||| | |||||| |||| ||||||||||| ||||    
T  104 cccttgtgttgaagcattatgaactttttgaaaagtgagtgcttaacctaattcacaaaagttgtgaaaccatagccgccgctatctaaaccttgttctc 203  T
Q  430 tctgaatctccgtttgaattggctagc 456  Q
    |||||||||||||| ||||||||||||    
T  204 tctgaatctccgttggaattggctagc 230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 7e-69; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 11535387 - 11535164
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  11535387 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaatag 11535288  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| |||||| |||| ||||||||||||||||||||||||||| |||||||  |||||||||||||||| |||||||    
T  11535287 aacccttgtgttgaagcattactaactttttgttagtgcttaacctaattcacaaaagttgtgaaaccctagccaccgctctctaaaccttgttctctct 11535188  T
Q  433 gaatctccgtttgaattggctagc 456  Q
     ||||| |||| ||||||||||||    
T  11535187 taatcttcgttggaattggctagc 11535164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 11542305 - 11542082
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||| ||||||||| || |||||  |||||||||||||||||    
T  11542305 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagcgttgtcttgttgtccacacaagtgattctataaatag 11542206  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| || ||||||||||||| |||||||    
T  11542205 aacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgttctctaaaccttgttctctct 11542106  T
Q  433 gaatctccgtttgaattggctagc 456  Q
     ||||| |||| ||||||||||||    
T  11542105 taatcttcgttggaattggctagc 11542082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 18561913 - 18562138
Alignment:
Q  235 ttattatttaatttacgaaaaa--tagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgac--cacaagtgattctataaat 330  Q
    ||||||||||||||||||||||  |||||||||||||| |||||||| ||||| |||| ||||||||||||||||||||  ||||||| |||||||||||    
T  18561913 ttattatttaatttacgaaaaaaatagagaaacgcggtccaccgtaaagtacggtgtatctaagtgttgtcttgctgactacacaagtaattctataaat 18562012  T
Q  331 agaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctct 430  Q
    ||||| |||||| ||||| ||||  ||| ||||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||    
T  18562013 agaacccttgtgttgaagtattactaactttttgtgagtgctaaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctct 18562112  T
Q  431 ctgaatctccgtttgaattggctagc 456  Q
    ||||||||||||| ||||||||||||    
T  18562113 ctgaatctccgttggaattggctagc 18562138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 29328666 - 29328893
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaa--- 329  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  ||||||||||||||       
T  29328666 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaaaaa 29328765  T
Q  330 -tagaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtct 428  Q
     |||||| |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||    
T  29328766 atagaacccttgtgttgaagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttct 29328865  T
Q  429 ctctgaatctccgtttgaattggctagc 456  Q
    |||||||||| |||| ||||||||||||    
T  29328866 ctctgaatcttcgttggaattggctagc 29328893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 12739424 - 12739647
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||| |||||  |||||||||||||||||||||||  |||||||||||||||||    
T  12739424 ttattatttaatttacgaaaaatagagaaacgcggtctatcgtaaggtacaatgtatttaagtgttgtcttgctgaccacacaagtgattctataaatag 12739523  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    |||  ||||  || |||||||  ||| ||||||||||| ||||||||||||||||||||||||||| | |||||| |||||||||||||||| |||||||    
T  12739524 aacctttgttttgtagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccgtagccgccgctctctaaaccttgttctctct 12739623  T
Q  433 gaatctccgtttgaattggctagc 456  Q
     |||||||||| ||||||||||||    
T  12739624 taatctccgttggaattggctagc 12739647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 12751741 - 12751964
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||||| ||||  |||||||||||||||||||||||  ||||||||||||||| |    
T  12751741 ttattatttaatttacgaaaaatagagaaacgcagtctaccgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatgg 12751840  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    |||  ||||| ||||||||||  ||| ||||||||||| ||||||| ||| ||||||||||||||| | |||||| |||||||||||||||| |||||||    
T  12751841 aaccattgtgttgaagcattactaactttttgtgagtgcttaacctcatttacaaaagttgtgaaaccgtagccgccgctctctaaaccttgttctctct 12751940  T
Q  433 gaatctccgtttgaattggctagc 456  Q
     |||||||||| ||||||||||||    
T  12751941 aaatctccgttggaattggctagc 12751964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 237 - 456
Target Start/End: Original strand, 15153352 - 15153573
Alignment:
Q  237 attatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgac--cacaagtgattctataaatagaa 334  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| |||   |||||||||||||||||||  |||||||||||||||||||||||    
T  15153352 attatttaatttatgaaaaatagagaaacgcggtccaccgtaaggtacggtgtgtttaagtgttgtcttgctgaccacacaagtgattctataaatagaa 15153451  T
Q  335 ctcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaac-cttggtctctctg 433  Q
    | |||||| ||||||||||  ||| ||||||||||| | ||||| ||||||||||||||||||| |||||||| ||||||||||||  ||| ||||||||    
T  15153452 cccttgtgttgaagcattacaaactttttgtgagtgctaaacctcattcacaaaagttgtgaaa-cctagccgccgctctctaaacatttgttctctctg 15153550  T
Q  434 aatctccgtttgaattggctagc 456  Q
    |||||||||| ||||||||||||    
T  15153551 aatctccgttggaattggctagc 15153573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 235 - 438
Target Start/End: Complemental strand, 11557392 - 11557193
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgac--cacaagtgattctataaatag 332  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||| ||||  |||||||||||||||||||  |||||||||||||||||||||    
T  11557392 ttattatttaatttacgaaaaatagagaaacgcagtccaccgtaaggtacgttgtatttaagtgttgtcttgctgaccacacaagtgattctataaatag 11557293  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| ||| || ||||||| |       ||| ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  11557292 aacccttatgttgaagcact------ttttggtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctct 11557199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 235 - 398
Target Start/End: Complemental strand, 24850884 - 24850719
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgac--cacaagtgattctataaatag 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||  |||||||||||||||||||||    
T  24850884 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacggtgtatttaagtgttgttttgctgaccacacaagtgattctataaatag 24850785  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaa 398  Q
    ||| ||| || |||||||||| |||| ||||| ||||| |||||||||||||||||||||||||||    
T  24850784 aacccttatgttgaagcattacgaactttttgggagtgcttaacctaattcacaaaagttgtgaaa 24850719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 357 - 456
Target Start/End: Original strand, 9978834 - 9978933
Alignment:
Q  357 accttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctctgaatctccgtttgaattggctagc 456  Q
    |||||||||||||| |||||||||||| |||||||||||||| |||||||| |||||||||||||||  ||||||||||||| |||| ||||||||||||    
T  9978834 accttttgtgagtgcttaacctaattcgcaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctctgaatcttcgttggaattggctagc 9978933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 2653186 - 2653090
Alignment:
Q  360 ttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctctgaatctccgtttgaattggctagc 456  Q
    |||| |||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||| |||| ||| ||||||||||||    
T  2653186 ttttatgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttgttctctctgattctctgttggaattggctagc 2653090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 272 - 406
Target Start/End: Original strand, 13393080 - 13393217
Alignment:
Q  272 caccgtaaggtacgatgtagctaagtg-ttgtcttgctgaccaca--agtgattctataaatagaactcttgtgctgaagcattatgaaccttttgtgag 368  Q
    |||||||||||||||||||  |||||| |||  ||||||||||||  |||||||||||||||||||| ||||||||||| |||||   |  ||||||||     
T  13393080 caccgtaaggtacgatgtacttaagtgcttggtttgctgaccacacaagtgattctataaatagaacccttgtgctgaaacattacatagtttttgtgaa 13393179  T
Q  369 tgtttaacctaattcacaaaagttgtgaaatcctagcc 406  Q
       ||||||||||| ||||||||||||||| |||||||    
T  13393180 cacttaacctaatttacaaaagttgtgaaaccctagcc 13393217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 289
Target Start/End: Original strand, 13393006 - 13393060
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgt 289  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  13393006 ttattatttaatttacgaaaaatagagaaatgcggtccaccgtaaggtacaatgt 13393060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 9978782 - 9978832
Alignment:
Q  293 taagtgttgtcttgctgaccaca--agtgattctataaatagaactcttgt 341  Q
    |||||||||||||||||||||||  | |||||||||||||||||| |||||    
T  9978782 taagtgttgtcttgctgaccacacgattgattctataaatagaacccttgt 9978832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 1e-64; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 19713823 - 19713602
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccacaagtgattctataaatagaa 334  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  | ||  |||||||||||||||    |||||||||||||||||||||||    
T  19713823 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacagtatatttaagtgttgtcttgcaccacacaagtgattctataaatagaa 19713724  T
Q  335 ctcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctctga 434  Q
    | |||||| |||||||| |  ||| ||| ||||||| ||||||||||||||||||||||||||| |||||| | |||||||||||||||  |||||||||    
T  19713723 cccttgtgttgaagcataactaacttttagtgagtgcttaacctaattcacaaaagttgtgaaaccctagctgccgctctctaaacctttttctctctga 19713624  T
Q  435 atctccgtttgaattggctagc 456  Q
    ||||||||| ||||||||||||    
T  19713623 atctccgttggaattggctagc 19713602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 24694783 - 24694562
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  |||||||| ||||||||    
T  24694783 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattccataaatag 24694684  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||| |  || ||||||||||||||||||||||||||| |||||||| || ||||||||||| | |||||||    
T  24694683 aacccttgtgttgaagcattactaactttttggg--tgcttaacctaattcacaaaagttgtgaaaccctagccgccgttctctaaacctcgttctctct 24694586  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  24694585 gaatctccgttggaattggctagc 24694562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 24701547 - 24701326
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  |||||||| ||||||||    
T  24701547 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattccataaatag 24701448  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||| ||||||||||  ||| ||||| |  || ||||||||||||||||||||||||||| |||||||| || ||||||||||| | |||||||    
T  24701447 aacccttgtgttgaagcattactaactttttggg--tgcttaacctaattcacaaaagttgtgaaaccctagccgccgttctctaaacctcgttctctct 24701350  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||| ||||||||||||    
T  24701349 gaatctccgttggaattggctagc 24701326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 19706497 - 19706274
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||| | ||  |||||||||||||| ||||||||  |||||||||||||||||    
T  19706497 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaagatacggtatatttaagtgttgtcttgttgaccacacaagtgattctataaatag 19706398  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| ||| || |||||||| |  ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||  |||||||    
T  19706397 aacccttatgttgaagcataactaacttttagtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaaccttcttctctct 19706298  T
Q  433 gaatctccgtttgaattggctagc 456  Q
     ||| || |||  |||||||||||    
T  19706297 aaatatctgttgaaattggctagc 19706274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 18565791 - 18565562
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgac--cacaagtgattctataaatag 332  Q
    ||||||||||||||||||||| |||||||||||||| ||| |||||| ||| ||||  |||||||||||||||||||  |||||||||||||||||||||    
T  18565791 ttattatttaatttacgaaaattagagaaacgcggtccactgtaaggcacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatag 18565692  T
Q  333 aac-----tcttgtgctgaagcattatgaac-cttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggt 426  Q
    |||     | ||||| ||||||||||  |||  ||||||||||| ||||||||||||||||||||||||||| |||||||| || ||||||||||||| |    
T  18565691 aacccttgtgttgtgttgaagcattacaaacttttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccggtctctaaaccttgtt 18565592  T
Q  427 ctctctgaatctccgtttgaattggctagc 456  Q
    || | |||||||||||| ||||||||||||    
T  18565591 ctatttgaatctccgttggaattggctagc 18565562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 938710 - 938655
Alignment:
Q  400 cctagccgtcgctctctaaaccttggtctctctgaatctccgtttgaattggctagc 456  Q
    |||||||| |||||||||||||||  ||||||| |||||||||| |||| |||||||    
T  938710 cctagccgccgctctctaaaccttattctctct-aatctccgttggaatcggctagc 938655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 1e-61; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 235 - 456
Target Start/End: Complemental strand, 22791158 - 22790935
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    ||||||||||||| ||||||||||||||||||| || ||| |||||||||| ||||  |||||||||||||||||||||||  |||||||||||||||||    
T  22791158 ttattatttaattcacgaaaaatagagaaacgcagtccactgtaaggtacggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatag 22791059  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctct 432  Q
    ||| |||||  || |||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| || ||| ||||| |    
T  22791058 aacccttgttttgtagcattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctatactttgttctcttt 22790959  T
Q  433 gaatctccgtttgaattggctagc 456  Q
    ||||||||||  ||||||||||||    
T  22790958 gaatctccgtgggaattggctagc 22790935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 235 - 420
Target Start/End: Complemental strand, 21329569 - 21329380
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaa--t 330  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||||||| || |||||  ||||||||||||||  |    
T  21329569 ttattatttaatttacgaaaaatagagaaacgcggtccaccgtaaggtacggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaaaat 21329470  T
Q  331 agaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaac 420  Q
    ||||| |||||| |||| |||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  21329469 agaacccttgtgttgaaacattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaac 21329380  T

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Target: chr2; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 371 - 456
Target Start/End: Original strand, 41664786 - 41664871
Alignment:
Q  371 tttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctctgaatctccgtttgaattggctagc 456  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| ||||||||||| ||||||||||||    
T  41664786 tttaacctaattcacaaaagttgtgaaaccctagccgtcgttctctaaaccttgttctctccgaatctccgttggaattggctagc 41664871  T

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Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 456
Target Start/End: Original strand, 18620805 - 18620941
Alignment:
Q  321 ttctataaatagaactcttgtgctgaagcattatgaaccttttgt-gagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaa 419  Q
    ||||||||||||||| |||||||| ||||||||   || |||||| ||    ||||||||||||| | |||||||||||||||||  | | |||||||||    
T  18620805 ttctataaatagaacccttgtgctaaagcattactgactttttgttgaacacttaacctaattcaaagaagttgtgaaatcctagttgccactctctaaa 18620904  T
Q  420 ccttggtctctctgaatctccgtttgaattggctagc 456  Q
    | ||| ||| |||||||||| ||| ||||||||||||    
T  18620905 ctttgttctatctgaatctctgttggaattggctagc 18620941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 18620681 - 18620730
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacg 285  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||| |||||    
T  18620681 ttattatttaatttac-aaaaatagagaaacgtggtccaccgtaatgtacg 18620730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 118; Significance: 6e-60; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 7989 - 8213
Alignment:
Q  235 ttattatttaatttacgaaaaa-tagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaata 331  Q
    ||||| ||||| |||||||||| |||||||||||||| |||||||||||| | ||||  |||||||||||||| || |||||  ||||||||||||||||    
T  7989 ttattgtttaacttacgaaaaaatagagaaacgcggtccaccgtaaggtatggtgtatttaagtgttgtcttgttgtccacacaagtgattctataaata 8088  T
Q  332 gaactcttgtgctgaagcattatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctc 431  Q
    |||| |||||| |||| |||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||| ||| ||||||    
T  8089 gaacccttgtgttgaaacattactaactttttgtgagtgcttaacctaattcacaaaagttgtgaaaccctagccgccgctctctaaactttgttctctc 8188  T
Q  432 tgaatctccgtttgaattggctagc 456  Q
    ||||||| |||| ||||||||||||    
T  8189 tgaatcttcgttggaattggctagc 8213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 106; Significance: 9e-53; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 19194 - 19418
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgaccaca--agtgattctataaatag 332  Q
    |||||||||||||||||||| ||| ||||||||||| ||| | |||||||| ||||  |||||||||||||| || |||||  |||||||||||||||||    
T  19194 ttattatttaatttacgaaatataaagaaacgcggtccactggaaggtacggtgtatttaagtgttgtcttgttgcccacacaagtgattctataaatag 19293  T
Q  333 aactcttgtgctgaagcattatgaaccttttgtga-gtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtctctc 431  Q
    ||| |||||| |||| |||||  ||| |||||||| ||| ||||||||||||||||||||||||||| |||||||| | |||||||||| | | ||||||    
T  19294 aacccttgtgttgaaacattactaactttttgtgaagtgcttaacctaattcacaaaagttgtgaaaccctagccgccactctctaaacgtagttctctc 19393  T
Q  432 tgaatctccgtttgaattggctagc 456  Q
    ||||||||||||  |||||||||||    
T  19394 tgaatctccgttgtaattggctagc 19418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 235 - 456
Target Start/End: Original strand, 6404 - 6633
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgac--cacaagtgattctataaatag 332  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||| ||| | ||||  |||||||||||||||||||  |||||||||||||||||||||    
T  6404 ttattatttaatttacgaaaaatggagaaactcggtccaccgtaaagtatggtgtatttaagtgttgtcttgctgaccacacaagtgattctataaatag 6503  T
Q  333 aactcttgtgctgaagcattatgaac------cttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggt 426  Q
    ||| |||||| |||||||| | ||||       |||| | |||| |||||||||||||||||||| |||||| |||||||| |||||||||||||||| |    
T  6504 aacccttgtgttgaagcatgacgaacttttttttttttttagtgcttaacctaattcacaaaagtggtgaaaccctagccgccgctctctaaaccttgtt 6603  T
Q  427 ctctctgaatctccgtttgaattggctagc 456  Q
    |||| ||||||||| || ||||||||||||    
T  6604 ctctttgaatctccattggaattggctagc 6633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 235 - 440
Target Start/End: Complemental strand, 229716 - 229505
Alignment:
Q  235 ttattatttaatttacgaaaaatagagaaacgcggttcaccgtaaggtacgatgtagctaagtgttgtcttgctgac--cacaagtgattctataaatag 332  Q
    |||||||||||||||||||||||||||||| | ||| |||||||||||||| ||||  |||||||| ||||||||||  |||||||||||||||||||||    
T  229716 ttattatttaatttacgaaaaatagagaaatgtggtccaccgtaaggtacggtgtatttaagtgttttcttgctgaccacacaagtgattctataaatag 229617  T
Q  333 aactcttgtgctgaagcattatgaac----cttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcgctctctaaaccttggtct 428  Q
    ||| ||| || |||||||| | ||||     |||| | |||| |||||||||||||||||||| |||||| |||||||| |||||||||||||||| |||    
T  229616 aacccttctgttgaagcatgacgaacttttttttttttagtgcttaacctaattcacaaaagtggtgaaaccctagccgccgctctctaaaccttgttct 229517  T
Q  429 ctctgaatctcc 440  Q
    || |||||||||    
T  229516 ctttgaatctcc 229505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 102 - 230
Target Start/End: Complemental strand, 2986 - 2856
Alignment:
Q  102 ttttgtgaaacctacttttcgaattattccaccttttacctaagatccattataacctaaacaacgtatttatactg-nnnnnnngaattgaaat-aaaa 199  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||         |||| |||| ||||    
T  2986 ttttgtgaaacctacttttcgaattattccaccttttacctaagctccattataacctaaacaacgcatttatagtgtttttttttaattaaaataaaaa 2887  T
Q  200 agatatatttatttgtgcatgtttttaaaga 230  Q
    | |||||||||||||||||||||||||||||    
T  2886 atatatatttatttgtgcatgtttttaaaga 2856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 312 - 453
Target Start/End: Complemental strand, 107494 - 107352
Alignment:
Q  312 cacaagtgattctataaatagaactcttgtgctgaagcattatgaaccttttgt-gagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcg 410  Q
    |||||||| |||| |||||||||| |||||||||||||||||  ||  |||||| ||    ||||  ||||||||||||||||||||| |||||||| |     
T  107494 cacaagtggttctgtaaatagaacccttgtgctgaagcattactaagtttttgttgaacacttaagataattcacaaaagttgtgaaaccctagccgcca 107395  T
Q  411 ctctctaaaccttggtctctctgaatctccgtttgaattggct 453  Q
    |||| |||| |||| |||||||||||||||||| |||||||||    
T  107394 ctctttaaatcttgttctctctgaatctccgttggaattggct 107352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 312 - 456
Target Start/End: Original strand, 10 - 151
Alignment:
Q  312 cacaagtgattctataaatagaactcttgtgctgaagcat-tatgaaccttttgtgagtgtttaacctaattcacaaaagttgtgaaatcctagccgtcg 410  Q
    |||||||| |||||||||||||||||||||||| |||||| |  ||   |||||  |||| || |||||||||| |||||| ||||||   || ||| ||    
T  10 cacaagtggttctataaatagaactcttgtgctaaagcatgtccga---ttttga-agtgctttacctaattcataaaagtggtgaaacagtatccgccg 105  T
Q  411 ctctctaaaccttggtctctctgaatctccgtttgaattggctagc 456  Q
    |||||||||||||| |||||||| |||||||||  | |||||||||    
T  106 ctctctaaaccttgttctctctggatctccgttgaagttggctagc 151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 456
Target Start/End: Complemental strand, 1132 - 1083
Alignment:
Q  406 cgtcgctctctaaaccttggtctctctgaatctccgtttgaattggctagc 456  Q
    ||||||||||||||| || ||||||||||||| ||||| ||||||||||||    
T  1132 cgtcgctctctaaac-ttagtctctctgaatcaccgttggaattggctagc 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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