View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11463_low_6 (Length: 238)
Name: NF11463_low_6
Description: NF11463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11463_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 6712862 - 6712638
Alignment:
| Q |
1 |
ttattcgtgtagttgttgaatattattagcatcaaaagacatttttgtggaatgtacgtagtgaaattggttttttaatgacttggataatgctaatgaa |
100 |
Q |
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| T |
6712862 |
ttattcgtgtagttgttgaatattattagcatcaaaagacatttttgtggaatgtacgtagtgaaattggttttttaatgacttggataatgctaatgaa |
6712763 |
T |
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| Q |
101 |
actgttattgaattgaatatcggtcaagtattttttaaagggatatcattcgaagaaaaaagtagttggatgagaatctgaataccccatgagcttgatg |
200 |
Q |
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| T |
6712762 |
actgttattgaattgaatatcggtcaagtattttttaaagggatatcattcgaagaaaaaagtagttggatgagaatctgaataccccatgagcttgatg |
6712663 |
T |
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| Q |
201 |
ttattgattagaacatacccttttt |
225 |
Q |
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| T |
6712662 |
ttattgatttgaacatacccttttt |
6712638 |
T |
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