View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11464_high_24 (Length: 245)
Name: NF11464_high_24
Description: NF11464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11464_high_24 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 6448489 - 6448728
Alignment:
| Q |
1 |
ttttactccttaatattaccaaagcagttctagccacttgaagttgagataaaatagttgttttgcattaaaagttcccttaaataaacaaattgactaa |
100 |
Q |
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| T |
6448489 |
ttttactccttaatattaccaaagcagttctagccacttgaggttgagataaaatagttgttttgcattaaaa-ttcccttaaataaacaaattgactaa |
6448587 |
T |
|
| Q |
101 |
aa-attagaagccttcgttcatcaagcaacataagtcaaatccactcatatgtagttaaatttaagcacgtacttttgacagcaaatacatcatgtttgt |
199 |
Q |
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| T |
6448588 |
aaaattagaagccttcgttcatcaagcaacataagtcaaatccactcatatgtagttaaatttaagcacgtacttttgacagcaaatacatcatgtttgt |
6448687 |
T |
|
| Q |
200 |
ttaaggccaaactgacatttgtgttcaagaattgccctttg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||| |||| |
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| T |
6448688 |
ttaaggccaaactgacatttgtgttcaagaattgccttttg |
6448728 |
T |
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