View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11466_high_18 (Length: 332)

Name: NF11466_high_18
Description: NF11466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11466_high_18
NF11466_high_18
[»] chr5 (41 HSPs)
chr5 (18-169)||(21180225-21180377)
chr5 (25-169)||(25919708-25919852)
chr5 (37-169)||(4561683-4561817)
chr5 (242-321)||(21180456-21180535)
chr5 (25-169)||(41958985-41959128)
chr5 (23-169)||(17885782-17885930)
chr5 (37-169)||(11721427-11721561)
chr5 (37-169)||(41123224-41123358)
chr5 (25-168)||(21040014-21040157)
chr5 (30-169)||(34048317-34048456)
chr5 (23-169)||(25088628-25088775)
chr5 (23-169)||(25146597-25146744)
chr5 (23-169)||(25233708-25233853)
chr5 (23-169)||(25297868-25298013)
chr5 (30-169)||(30916637-30916777)
chr5 (35-169)||(12147989-12148123)
chr5 (37-169)||(38874418-38874551)
chr5 (37-169)||(26243262-26243395)
chr5 (91-168)||(28796533-28796609)
chr5 (56-169)||(31312566-31312678)
chr5 (39-169)||(42097740-42097870)
chr5 (91-169)||(22756144-22756221)
chr5 (91-169)||(23159652-23159729)
chr5 (44-169)||(29691129-29691253)
chr5 (91-169)||(41254203-41254280)
chr5 (91-168)||(16920558-16920633)
chr5 (37-164)||(6896869-6896998)
chr5 (37-169)||(23108713-23108846)
chr5 (98-169)||(34309454-34309524)
chr5 (91-169)||(8861286-8861363)
chr5 (37-169)||(6117747-6117878)
chr5 (56-168)||(10819465-10819576)
chr5 (65-169)||(27331065-27331167)
chr5 (105-169)||(37217386-37217449)
chr5 (91-165)||(7577839-7577913)
chr5 (66-169)||(8855558-8855659)
chr5 (56-113)||(25962952-25963010)
chr5 (67-169)||(42368598-42368699)
chr5 (44-128)||(40765549-40765634)
chr5 (67-169)||(41185055-41185156)
chr5 (37-169)||(25962963-25963098)
[»] chr7 (36 HSPs)
chr7 (23-169)||(20089228-20089372)
chr7 (25-169)||(21443946-21444091)
chr7 (23-165)||(34436764-34436906)
chr7 (37-143)||(18268307-18268411)
chr7 (91-169)||(21022470-21022547)
chr7 (25-169)||(2240471-2240615)
chr7 (25-169)||(17051966-17052110)
chr7 (23-169)||(20164184-20164331)
chr7 (37-168)||(35158343-35158476)
chr7 (23-169)||(3401950-3402097)
chr7 (37-169)||(15721091-15721224)
chr7 (23-169)||(44448469-44448615)
chr7 (56-165)||(31749470-31749577)
chr7 (91-169)||(24233513-24233590)
chr7 (37-169)||(26254638-26254771)
chr7 (25-161)||(13253498-13253636)
chr7 (23-169)||(36374325-36374472)
chr7 (25-168)||(1572885-1573027)
chr7 (43-169)||(41380556-41380681)
chr7 (67-169)||(2624484-2624585)
chr7 (56-169)||(14187705-14187818)
chr7 (91-169)||(15994657-15994735)
chr7 (37-169)||(5864525-5864659)
chr7 (37-169)||(2624655-2624785)
chr7 (37-165)||(11576654-11576784)
chr7 (105-169)||(13592940-13593003)
chr7 (35-143)||(26876599-26876706)
chr7 (37-143)||(22317309-22317416)
chr7 (91-169)||(17167686-17167763)
chr7 (91-169)||(32946471-32946548)
chr7 (37-169)||(10067916-10068048)
chr7 (56-169)||(31750870-31750984)
chr7 (91-165)||(34258189-34258262)
chr7 (37-169)||(43707007-43707140)
chr7 (30-169)||(38130989-38131127)
chr7 (97-169)||(40938332-40938403)
[»] chr4 (35 HSPs)
chr4 (25-171)||(5114197-5114343)
chr4 (23-169)||(32682254-32682398)
chr4 (37-169)||(21507986-21508119)
chr4 (37-169)||(29104322-29104456)
chr4 (37-169)||(49166807-49166939)
chr4 (37-169)||(3652432-3652566)
chr4 (37-169)||(31226263-31226395)
chr4 (37-169)||(41325294-41325426)
chr4 (37-165)||(49296087-49296215)
chr4 (37-169)||(27626832-27626962)
chr4 (31-169)||(39133240-39133378)
chr4 (37-169)||(22854126-22854260)
chr4 (37-143)||(7913219-7913327)
chr4 (23-165)||(5514440-5514582)
chr4 (30-169)||(14121328-14121466)
chr4 (23-169)||(16589129-16589273)
chr4 (56-169)||(4102939-4103051)
chr4 (37-165)||(50603956-50604084)
chr4 (37-169)||(30919077-30919210)
chr4 (37-169)||(49300898-49301030)
chr4 (30-169)||(18510137-18510277)
chr4 (56-169)||(25244472-25244584)
chr4 (24-169)||(14946106-14946252)
chr4 (91-169)||(50719809-50719886)
chr4 (37-118)||(31857055-31857135)
chr4 (91-151)||(15786080-15786139)
chr4 (37-143)||(33649037-33649143)
chr4 (122-169)||(36395415-36395461)
chr4 (56-115)||(49166796-49166855)
chr4 (91-169)||(17696147-17696224)
chr4 (91-169)||(23184941-23185018)
chr4 (91-169)||(24675465-24675542)
chr4 (37-125)||(42056140-42056228)
chr4 (91-124)||(46088268-46088301)
chr4 (30-81)||(52194332-52194384)
[»] chr2 (51 HSPs)
chr2 (23-167)||(39751943-39752087)
chr2 (23-169)||(10071211-10071357)
chr2 (37-168)||(18756432-18756563)
chr2 (23-169)||(43830584-43830729)
chr2 (37-169)||(1975564-1975696)
chr2 (37-169)||(7007855-7007986)
chr2 (37-169)||(15543795-15543927)
chr2 (23-169)||(18048965-18049112)
chr2 (37-169)||(19272823-19272957)
chr2 (37-169)||(42794173-42794305)
chr2 (91-169)||(17188732-17188809)
chr2 (23-143)||(28581599-28581721)
chr2 (23-169)||(41100841-41100987)
chr2 (25-140)||(11839136-11839251)
chr2 (65-169)||(16138990-16139094)
chr2 (37-169)||(36525438-36525570)
chr2 (37-169)||(38127923-38128056)
chr2 (30-169)||(18755107-18755245)
chr2 (37-169)||(29949717-29949848)
chr2 (37-169)||(33218405-33218539)
chr2 (95-165)||(7318289-7318358)
chr2 (30-169)||(9419580-9419720)
chr2 (25-165)||(38950006-38950146)
chr2 (23-111)||(22984056-22984143)
chr2 (38-169)||(34831655-34831787)
chr2 (37-168)||(36795235-36795366)
chr2 (37-169)||(16204389-16204521)
chr2 (37-169)||(29884078-29884210)
chr2 (37-165)||(26498595-26498724)
chr2 (37-143)||(31122118-31122225)
chr2 (65-168)||(39373154-39373255)
chr2 (91-169)||(776355-776432)
chr2 (37-118)||(4157957-4158038)
chr2 (37-115)||(22984100-22984178)
chr2 (60-169)||(11673724-11673832)
chr2 (128-169)||(31989566-31989606)
chr2 (91-168)||(33315327-33315403)
chr2 (91-139)||(24759108-24759156)
chr2 (56-115)||(15543879-15543938)
chr2 (98-169)||(25293417-25293485)
chr2 (97-168)||(31260665-31260736)
chr2 (37-165)||(16260671-16260804)
chr2 (23-169)||(25103814-25103962)
chr2 (91-169)||(28781733-28781810)
chr2 (56-113)||(33218492-33218550)
chr2 (56-169)||(2526533-2526644)
chr2 (37-113)||(19253561-19253638)
chr2 (56-169)||(22846093-22846205)
chr2 (128-169)||(31377762-31377802)
chr2 (56-115)||(16260660-16260720)
chr2 (30-73)||(30497337-30497380)
[»] chr3 (29 HSPs)
chr3 (25-169)||(300317-300462)
chr3 (23-166)||(25024622-25024766)
chr3 (37-169)||(52839379-52839513)
chr3 (37-169)||(28735604-28735737)
chr3 (37-169)||(14220450-14220582)
chr3 (37-169)||(14224677-14224809)
chr3 (61-169)||(48689260-48689367)
chr3 (37-169)||(3505081-3505214)
chr3 (27-169)||(26770001-26770143)
chr3 (30-169)||(14870012-14870152)
chr3 (56-169)||(7226222-7226333)
chr3 (67-143)||(4658609-4658685)
chr3 (30-169)||(22818036-22818177)
chr3 (25-169)||(38703065-38703210)
chr3 (91-169)||(39218731-39218808)
chr3 (37-169)||(13041443-13041577)
chr3 (37-169)||(13049520-13049654)
chr3 (35-143)||(44963182-44963289)
chr3 (37-169)||(31293534-31293666)
chr3 (25-169)||(32721589-32721733)
chr3 (30-169)||(14154858-14154998)
chr3 (91-165)||(23293494-23293567)
chr3 (37-169)||(5572033-5572167)
chr3 (93-165)||(36727714-36727786)
chr3 (37-169)||(45151785-45151915)
chr3 (71-169)||(16896014-16896111)
chr3 (37-169)||(19111022-19111155)
chr3 (56-113)||(5572120-5572178)
chr3 (30-82)||(36727766-36727819)
[»] chr1 (24 HSPs)
chr1 (24-169)||(26398936-26399081)
chr1 (37-169)||(27666078-27666211)
chr1 (24-169)||(15336569-15336719)
chr1 (30-169)||(20158732-20158871)
chr1 (37-169)||(6284258-6284391)
chr1 (37-169)||(14909841-14909972)
chr1 (23-165)||(9209723-9209866)
chr1 (37-165)||(26190892-26191021)
chr1 (37-169)||(44961167-44961299)
chr1 (91-169)||(21770941-21771018)
chr1 (27-169)||(30147218-30147361)
chr1 (30-169)||(46528840-46528980)
chr1 (92-169)||(21853640-21853716)
chr1 (91-169)||(22387224-22387301)
chr1 (25-169)||(31883610-31883755)
chr1 (37-169)||(5932123-5932257)
chr1 (93-169)||(16421101-16421176)
chr1 (37-169)||(5457242-5457375)
chr1 (30-139)||(23161979-23162089)
chr1 (23-59)||(16421061-16421097)
chr1 (63-128)||(7381384-7381450)
chr1 (44-169)||(16474473-16474598)
chr1 (91-169)||(19967780-19967857)
chr1 (98-143)||(50344998-50345043)
[»] chr6 (39 HSPs)
chr6 (23-169)||(2270632-2270779)
chr6 (37-169)||(21544292-21544425)
chr6 (23-143)||(11107638-11107759)
chr6 (30-169)||(17158195-17158334)
chr6 (37-169)||(1227838-1227971)
chr6 (23-169)||(13729017-13729163)
chr6 (23-169)||(26475911-26476058)
chr6 (37-165)||(12293024-12293152)
chr6 (30-169)||(34414351-34414491)
chr6 (37-165)||(9676306-9676434)
chr6 (96-169)||(29942717-29942789)
chr6 (37-169)||(32603565-32603698)
chr6 (24-169)||(9222409-9222554)
chr6 (37-169)||(7321841-7321974)
chr6 (37-169)||(33708634-33708766)
chr6 (30-169)||(31174052-31174188)
chr6 (37-169)||(10545911-10546044)
chr6 (37-169)||(22362780-22362913)
chr6 (37-169)||(22495781-22495914)
chr6 (37-115)||(2270614-2270695)
chr6 (91-168)||(15881185-15881261)
chr6 (25-115)||(20504239-20504331)
chr6 (91-169)||(25070591-25070668)
chr6 (30-169)||(9234998-9235137)
chr6 (37-169)||(34077427-34077559)
chr6 (67-139)||(5459945-5460016)
chr6 (30-165)||(18592165-18592301)
chr6 (91-143)||(21556080-21556132)
chr6 (30-116)||(32216876-32216963)
chr6 (98-140)||(359803-359845)
chr6 (91-169)||(10343701-10343778)
chr6 (123-169)||(16119910-16119955)
chr6 (106-168)||(18591201-18591262)
chr6 (37-169)||(686373-686505)
chr6 (66-139)||(11362856-11362928)
chr6 (91-168)||(13462804-13462879)
chr6 (37-118)||(16659593-16659676)
chr6 (56-115)||(21544281-21544341)
chr6 (25-88)||(32216873-32216937)
[»] chr8 (43 HSPs)
chr8 (37-169)||(13558706-13558836)
chr8 (37-169)||(11830337-11830470)
chr8 (37-169)||(12478735-12478868)
chr8 (23-169)||(5566563-5566710)
chr8 (37-169)||(5642870-5643002)
chr8 (37-169)||(5644811-5644943)
chr8 (23-169)||(13572688-13572835)
chr8 (23-169)||(31974738-31974885)
chr8 (25-169)||(9305487-9305632)
chr8 (37-169)||(38711703-38711835)
chr8 (37-169)||(41509460-41509595)
chr8 (37-169)||(25653785-25653917)
chr8 (37-161)||(38703688-38703811)
chr8 (65-169)||(32684642-32684745)
chr8 (25-169)||(34227476-34227622)
chr8 (23-169)||(27637149-27637295)
chr8 (30-169)||(8626668-8626807)
chr8 (56-165)||(12936251-12936360)
chr8 (61-169)||(34845364-34845470)
chr8 (24-169)||(35839506-35839648)
chr8 (56-171)||(35990656-35990771)
chr8 (37-143)||(15568810-15568917)
chr8 (44-169)||(10761592-10761716)
chr8 (37-169)||(29212032-29212163)
chr8 (25-143)||(15738236-15738354)
chr8 (37-115)||(31974822-31974903)
chr8 (24-165)||(23389168-23389311)
chr8 (30-169)||(30221925-30222065)
chr8 (37-169)||(2873610-2873743)
chr8 (93-169)||(9662274-9662349)
chr8 (37-169)||(15935466-15935600)
chr8 (37-169)||(36637154-36637288)
chr8 (37-115)||(297770-297848)
chr8 (91-169)||(18029798-18029875)
chr8 (37-169)||(30872476-30872608)
chr8 (24-118)||(13558663-13558756)
chr8 (55-169)||(24768688-24768801)
chr8 (66-139)||(8442027-8442100)
chr8 (37-143)||(29346168-29346276)
chr8 (92-169)||(32393498-32393574)
chr8 (56-115)||(11830326-11830386)
chr8 (56-115)||(12478724-12478784)
chr8 (56-115)||(41509546-41509606)
[»] scaffold0022 (2 HSPs)
scaffold0022 (37-169)||(63112-63245)
scaffold0022 (56-115)||(63196-63256)
[»] scaffold0430 (1 HSPs)
scaffold0430 (37-169)||(12565-12697)
[»] scaffold0289 (1 HSPs)
scaffold0289 (30-168)||(6879-7017)
[»] scaffold1462 (1 HSPs)
scaffold1462 (91-169)||(297-374)
[»] scaffold0121 (1 HSPs)
scaffold0121 (45-169)||(12637-12762)
[»] scaffold0002 (2 HSPs)
scaffold0002 (37-169)||(432476-432607)
scaffold0002 (37-169)||(332225-332359)
[»] scaffold0004 (1 HSPs)
scaffold0004 (25-82)||(212662-212720)
[»] scaffold0154 (1 HSPs)
scaffold0154 (61-169)||(9377-9484)
[»] scaffold0125 (1 HSPs)
scaffold0125 (23-117)||(3418-3513)
[»] scaffold0003 (1 HSPs)
scaffold0003 (128-169)||(306721-306761)


Alignment Details
Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 21180225 - 21180377
Alignment:
Q  18 tttgtagggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacag 116  Q
    |||| ||||||||||| | |||||||||||||||||||||||  ||||| |||||| |||||| || || |||  |||||||||||||||||||||| ||    
T  21180225 tttgcagggggctaaaccgaaatttgctcaaattaacagggggtaaatcaaaattttctcaaaatacaggggtgaaaaccgaaattttctcaaattaaag 21180324  T
Q  117 ggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21180325 ggtgcaaaatttgccatgaaggtccaagaaccaaataatcttcaaattacaag 21180377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 25919708 - 25919852
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacaggg-gcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaa 123  Q
    ||||||||| ||||||| |||||||||||||||| | ||| |||||||||||||||||| |  ||  |||||||||||||| |||||||| ||   ||||    
T  25919708 ggggctaaaccaaaattcgctcaaattaacagggagtaaaccgaaatttgctcaaattacacgggggtaaaccgaaattttatcaaattatagacggcaa 25919807  T
Q  124 aatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||    
T  25919808 aatttgccatgaaggtccaa-aaccaaaaaatcttcaaattacaag 25919852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 4561817 - 4561683
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    |||||||||||||||||||||||   ||| |||||||||||||||||| | | |||||||||| ||||||||||||||||||||| |  |||||| |||     
T  4561817 aaatttgctcaaattaacaggggggtaaaccgaaatttgctcaaattacaaggggtttaaacctaaattttctcaaattacagggggtgaaattttccaa 4561718  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| || |||| |||||||||||||||||    
T  4561717 gaaggtccaa-aatcaaaaaatcttcaaattacaag 4561683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 21180456 - 21180535
Alignment:
Q  242 ttcaatgggataaaacaaaagggaagtgaaaaaatagtgtagtgatcaaacatcaataagctaacaaaacctatattcat 321  Q
    |||||| |||||||||||||| |||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  21180456 ttcaataggataaaacaaaagtgaagggaaaaaatagggtagtgatcaaacatccataagctaacaaaacctatattcat 21180535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 41958985 - 41959128
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgca 122  Q
    ||||||||| |||||||| |||||||||||| |||| ||| |||||||||||||||| | | ||||  |||||| |||||||||||||| ||| || ||     
T  41958985 ggggctaaaccaaaattttctcaaattaacatggggtaaaccgaaatttgctcaaatcagaggagg--taaaccaaaattttctcaaatgacaaggggcg 41959082  T
Q  123 aaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||    
T  41959083 aaatttgccatgaaggtccaa-aaccaaaaattcttcaaattacaag 41959128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 17885930 - 17885782
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggc---aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggt 119  Q
    ||||||||||| | |||||  ||||||||||||||||    ||| | ||||||||||||||| | | ||  ||||||||||||||||||||||||| ||     
T  17885930 agggggctaaaccgaaattcactcaaattaacaggggggttaaaccaaaatttgctcaaatttttggggcataaaccgaaattttctcaaattacaaggg 17885831  T
Q  120 gcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    || |||||| ||||||||||| || ||||||| |||||||||||||||||    
T  17885830 gcgaaattttccatgaaggtctaa-aaccaaaaaatcttcaaattacaag 17885782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 11721427 - 11721561
Alignment:
Q  37 aaatttgctcaaattaacaggggc---aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    ||||||||||||||||||| |||    ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| | ||||||| ||||    
T  11721427 aaatttgctcaaattaacatgggggttaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggggtaaaattttccat 11721526  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| ||||||| |||||||||||||||||    
T  11721527 gaaggtccaa-aaccaaaaaatcttcaaattacaag 11721561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 41123358 - 41123224
Alignment:
Q  37 aaatttgctcaaattaacaggggc---aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    ||||||||||||||||||| |||    ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| | ||||||| ||||    
T  41123358 aaatttgctcaaattaacatgggggttaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggggtaaaattttccat 41123259  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| ||||||| |||||||||||||||||    
T  41123258 gaaggtccaa-aaccaaaaaatcttcaaattacaag 41123224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 168
Target Start/End: Original strand, 21040014 - 21040157
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaa 123  Q
    |||| |||| ||||||||||| ||||||| |||||  |||||||||||||||||||||| |  ||  |||||| |||||||||||||||||| || |  |    
T  21040014 gggggtaaaccaaaatttgctaaaattaatagggggtaaatcgaaatttgctcaaattacaagggggtaaacctaaattttctcaaattacatggggtga 21040113  T
Q  124 aatttgccatgaaggtccaagaaccaaagaatcttcaaattacaa 168  Q
    |||||  ||||||||||||| ||||||| |||||||| |||||||    
T  21040114 aatttttcatgaaggtccaa-aaccaaaaaatcttcatattacaa 21040157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 34048456 - 34048317
Alignment:
Q  30 taaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaattt 128  Q
    |||| ||||||||| ||||||||  |||||  ||| |||||||||||||||||| |||||| |||| | ||||||  |||||||||| || | |||||||    
T  34048456 taaaccaaaatttgttcaaattactagggggtaaaccgaaatttgctcaaattacagaggtataaatcaaaatttaatcaaattacaaggggtaaaattt 34048357  T
Q  129 gccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||||||| ||| ||| | |||||||||||||||    
T  34048356 gccatgaaggtccaa-aactaaaaactcttcaaattacaag 34048317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 25088775 - 25088628
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggcaaatc---gaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggt 119  Q
    ||||||||||| |||||||||||||||||| ||||||  || |   ||||||||||||| ||| || |   |||||| |||||||||||||| ||| ||     
T  25088775 agggggctaaaccaaaatttgctcaaattagcagggggtaaacaccgaaatttgctcaa-ttacagggaggtaaaccaaaattttctcaaatgacaaggg 25088677  T
Q  120 gcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    || ||||||||||||||||||||| ||||||| |||||| ||||||||||    
T  25088676 gcgaaatttgccatgaaggtccaa-aaccaaaaaatcttaaaattacaag 25088628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 25146744 - 25146597
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggcaaatc---gaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggt 119  Q
    ||||||||||| |||||||||||||||||| ||||||  || |   ||||||||||||| ||| || |   |||||| |||||||||||||| ||| ||     
T  25146744 agggggctaaaccaaaatttgctcaaattagcagggggtaaacaccgaaatttgctcaa-ttacagggaggtaaaccaaaattttctcaaatgacaaggg 25146646  T
Q  120 gcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    || ||||||||||||||||||||| ||||||| |||||| ||||||||||    
T  25146645 gcgaaatttgccatgaaggtccaa-aaccaaaaaatcttaaaattacaag 25146597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 25233853 - 25233708
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggg-gcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    |||||| |||| | ||||| |||||||||||||||| | ||| | || ||| |||||||| | | ||  ||||||||||||||||||||||||| || ||    
T  25233853 agggggttaaaccgaaattcgctcaaattaacagggtgtaaaccaaacttttctcaaatttttggggcataaaccgaaattttctcaaattacaaggggc 25233754  T
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     |||||| |||||||||||||| ||||||| |||||||||||||||||    
T  25233753 gaaattttccatgaaggtccaa-aaccaaa-aatcttcaaattacaag 25233708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 25298013 - 25297868
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggg-gcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    |||||| |||| | ||||| |||||||||||||||| | ||| | || ||| |||||||| | | ||  ||||||||||||||||||||||||| || ||    
T  25298013 agggggttaaaccgaaattcgctcaaattaacagggtgtaaaccaaacttttctcaaatttttggggcataaaccgaaattttctcaaattacaaggggc 25297914  T
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     |||||| |||||||||||||| ||||||| |||||||||||||||||    
T  25297913 gaaattttccatgaaggtccaa-aaccaaa-aatcttcaaattacaag 25297868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 30916637 - 30916777
Alignment:
Q  30 taaatcaaaatttgctcaaattaacag--gggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatt 127  Q
    |||| ||||||||||||||||||||||  ||| ||| |||||   |||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||    
T  30916637 taaaccaaaatttgctcaaattaacagtggggtaaaccgaaacaggctcaaattacaagggggtaaacctaaatttcctcaaattacagggggtgaaatt 30916736  T
Q  128 tgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    | ||| |||||||||| ||||||| |||||||||||||||||    
T  30916737 ttccacgaaggtccaa-aaccaaaaaatcttcaaattacaag 30916777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 12148123 - 12147989
Alignment:
Q  35 caaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    |||||||| ||||||||||||||||  ||| |||||||| ||||||||| |  ||  |||| | |||||| ||||||||||| || |  |||||| | ||    
T  12148123 caaaattttctcaaattaacagggggtaaaccgaaattttctcaaattacaagggggtaaagctaaatttgctcaaattacaaggggtgaaattttctat 12148024  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| ||||||| |||||||||||||||||    
T  12148023 gaaggtccaa-aaccaaaaaatcttcaaattacaag 12147989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 38874551 - 38874418
Alignment:
Q  37 aaatttgctcaaattaacag--gggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    ||||||||| ||||||| ||  ||| ||| |||||| ||||||||||| |  ||  |||||| |||||| |||||||||||||  |  |||||| |||||    
T  38874551 aaatttgctaaaattaaaagtggggaaaaccgaaatatgctcaaattacaagggggtaaacctaaatttgctcaaattacaggaagtgaaattttccatg 38874452  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||||||||||||    
T  38874451 aaggtccaa-aaccaaaaaatcttcaaattacaag 38874418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 26243262 - 26243395
Alignment:
Q  37 aaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattat-agaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    ||||||||||||||||||| |||| ||| |||| ||| |||||||||| || ||  |||||| | |||| ||||||||||| || |  |||||| |||||    
T  26243262 aaatttgctcaaattaacagggggtaaaccgaacttttctcaaattataaggggggtaaacctatatttgctcaaattacaaggggtgaaattttccatg 26243361  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||||||| ||||    
T  26243362 aaggtccaa-aaccaaaaaatcttcaaatttcaag 26243395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 28796533 - 28796609
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaa 168  Q
    |||| |||||||||||||||||||| ||||  |||||| |||||||||||||| |||||||  |||||||||||||||    
T  28796533 taaatcgaaattttctcaaattacaaggtgtgaaattttccatgaaggtccaa-aaccaaaatatcttcaaattacaa 28796609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 31312678 - 31312566
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaat 155  Q
    |||| ||| |||||||||||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||| || ||||||||||| ||||||| ||     
T  31312678 ggggtaaaccgaaatttgctcaaattacaaggggataaacctaaatttgctcaaattacagggggtgaaattttccgtgaaggtccaa-aaccaaaaaac 31312580  T
Q  156 cttcaaattacaag 169  Q
    ||||||||||||||    
T  31312579 cttcaaattacaag 31312566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 169
Target Start/End: Complemental strand, 42097870 - 42097740
Alignment:
Q  39 atttgctcaaattaaca-ggggcaaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaa 136  Q
    |||||| |||||||||| |||| ||| ||||||||||||||||||  ||||   |||||| |||||| ||||||||||| |  |  |||||| |||||||    
T  42097870 atttgcccaaattaacaaggggtaaaccgaaatttgctcaaattacaagagtggtaaacctaaatttgctcaaattacaagaagtgaaattttccatgaa 42097771  T
Q  137 ggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||| ||||||| |||||||||||||||||    
T  42097770 ggtccaa-aaccaaa-aatcttcaaattacaag 42097740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 22756221 - 22756144
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||| |||||||||||||| | ||||| | |||||||||||||| ||| ||| |||||||||||||||||    
T  22756221 taaacctaaatttgctcaaattacagggggtaaaatgttccatgaaggtccaa-aacaaaaaaatcttcaaattacaag 22756144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 23159652 - 23159729
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||||| ||||| ||||||||    |||||| |||||||||||||| ||||||| |||||||||||||||||    
T  23159652 taaaccgaaatttgctcaatttacaggggatgaaattttccatgaaggtccaa-aaccaaaaaatcttcaaattacaag 23159729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 29691129 - 29691253
Alignment:
Q  44 ctcaaattaacaggggcaaatc-gaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtcca 142  Q
    ||||||||||||||||  || | ||||||||||||||||| |  ||  |||||| ||||||  ||||||||||||| |  |||||| | |||||||||||    
T  29691129 ctcaaattaacagggggtaaactgaaatttgctcaaattacaacggaataaaccaaaatttggtcaaattacagggagtgaaattttc-atgaaggtcca 29691227  T
Q  143 agaaccaaagaatcttcaaattacaag 169  Q
    | ||||||| |||||||||||||||||    
T  29691228 a-aaccaaaaaatcttcaaattacaag 29691253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 41254280 - 41254203
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||||| ||||||||| |||| |||||||||  | |||||||| || ||||||| |||||||||||||||||    
T  41254280 taaaccgaaatttcctcaaattatagggggcaaaatttttcgtgaaggtctaa-aaccaaaaaatcttcaaattacaag 41254203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 16920558 - 16920633
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaa 168  Q
    |||||| ||||||||||||||||||||| |  |||||| ||||||||||| || ||||||| ||||||||||||||||    
T  16920558 taaacctaaattttctcaaattacaggg-gtgaaattttccatgaaggtctaa-aaccaaaaaatcttcaaattacaa 16920633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 164
Target Start/End: Complemental strand, 6896998 - 6896869
Alignment:
Q  37 aaatttgctcaaattaac--aggggcaaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    ||||||||||||||||||  ||||| ||| |||||||||||||||||| | | ||  |||||| | |||| |||||||||||||  |  |||||| ||||    
T  6896998 aaatttgctcaaattaaccgaggggtaaaccgaaatttgctcaaattacaagggggataaacctatatttgctcaaattacaggtggtgaaattttccat 6896899  T
Q  134 gaaggtccaagaaccaaagaatcttcaaatt 164  Q
    |||||||||| || |||| |||||| |||||    
T  6896898 gaaggtccaa-aatcaaaaaatcttaaaatt 6896869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 23108846 - 23108713
Alignment:
Q  37 aaatttgctcaaattaaca--ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||| ||  |||| ||| |||||||||||||||||||||  | ||||||||||||||    |  |||||||| |  ||||||| ||||    
T  23108846 aaatttgctcaaattagcaaaggggtaaaccgaaatttgctcaaattataggaggttaaaccgaaatttgaagattttacagggggtgaaatttgtcatg 23108747  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||| ||| ||||||| ||  |||||||||||||    
T  23108746 aaggt-caaaaaccaaaaaaaattcaaattacaag 23108713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 34309524 - 34309454
Alignment:
Q  98 aaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||||||||||| | ||||||||| | ||||||||| || ||||||| |||||| ||||||||||    
T  34309524 aaattttctcaaattacagagggcaaaattttcaatgaaggtctaa-aaccaaaaaatctttaaattacaag 34309454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 8861363 - 8861286
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||| |||||||||||||| |  |||||| | || ||||||||| ||||||| |||||||||||||||||    
T  8861363 taaacctaaatttgctcaaattacagggggtgaaattttctattaaggtccaa-aaccaaaaaatcttcaaattacaag 8861286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 6117747 - 6117878
Alignment:
Q  37 aaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||||||||||||||||  ||| | |||||| ||||||||| | | ||   ||||| |||||| |||||||||||||| |  |||||| ||||||    
T  6117747 aaatttgctcaaattaacagggt-aaaccaaaattttctcaaattacaaggggggcaaacctaaatttgctcaaattacagggagtgaaattttccatga 6117845  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| | | ||| |||||| ||||||||||    
T  6117846 aggtccaa-atctaaaaaatcttaaaattacaag 6117878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 10819576 - 10819465
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaat 155  Q
    |||| |||||||||||| ||||||||| |  ||  |||| | |||||| |||||| ||||||| |  |||||| ||||||||||| || || |||| |||    
T  10819576 ggggtaaatcgaaattttctcaaattacaagggggtaaatctaaatttgctcaaaatacagggggtgaaattttccatgaaggtctaa-aatcaaaaaat 10819478  T
Q  156 cttcaaattacaa 168  Q
    |||||||||||||    
T  10819477 cttcaaattacaa 10819465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 27331065 - 27331167
Alignment:
Q  65 cgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaatt 164  Q
    |||||||||||||||||  || || | ||||| |||||| || ||||||||| | |||||| ||  |||||||||| || ||||||| ||||||||||||    
T  27331065 cgaaatttgctcaaattgcagggggt-aaaccaaaatttccttaaattacagagggcaaaaattttcatgaaggtctaa-aaccaaaaaatcttcaaatt 27331162  T
Q  165 acaag 169  Q
    |||||    
T  27331163 acaag 27331167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 37217449 - 37217386
Alignment:
Q  105 ctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||||||| |  |||||| |||||||||||||| ||||||| |||||||||||| ||||    
T  37217449 ctcaaattacagggggtgaaattttccatgaaggtccaa-aaccaaaaaatcttcaaatttcaag 37217386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 7577913 - 7577839
Alignment:
Q  91 taaaccgaaattttctcaaatt-acagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaatta 165  Q
    ||||||||||||| |||||||| |||||| |  |||||| |||||||| ||||| ||||||| |||||||||||||    
T  7577913 taaaccgaaatttgctcaaattaacagggggtgaaattttccatgaagatccaa-aaccaaaaaatcttcaaatta 7577839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 169
Target Start/End: Original strand, 8855558 - 8855659
Alignment:
Q  66 gaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaatta 165  Q
    ||||||||||||||||  || || | |||||||||||  |||||||| |||||  ||||||||  |||||||||  || ||||||| |||||||||||||    
T  8855558 gaaatttgctcaaattgcagggggt-aaaccgaaattccctcaaattgcaggggtcaaaatttttcatgaaggtgtaa-aaccaaaaaatcttcaaatta 8855655  T
Q  166 caag 169  Q
    ||||    
T  8855656 caag 8855659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 25962952 - 25963010
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaatt-atagaggtttaaaccgaaattttctcaaatta 113  Q
    |||| ||| ||||||||||||||||| | || ||||||||||||| |||||||||||||    
T  25962952 ggggtaaaccgaaatttgctcaaattaacaggggtttaaaccgaacttttctcaaatta 25963010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 42368598 - 42368699
Alignment:
Q  67 aaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattac 166  Q
    ||||||||||||||||| | ||  |||| | |||||| |||||||||||||| |   ||||| | || ||| ||||| ||||||| ||||||||||||||    
T  42368598 aaatttgctcaaattatcggggggtaaatcaaaatttgctcaaattacagggagtggaattttctataaagatccaa-aaccaaaaaatcttcaaattac 42368696  T
Q  167 aag 169  Q
    |||    
T  42368697 aag 42368699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 128
Target Start/End: Original strand, 40765549 - 40765634
Alignment:
Q  44 ctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaattt 128  Q
    ||||||||||||||||  ||| |||||||||||||||||  |  ||  ||||||||| ||| ||||||||| |||| |||||||||    
T  40765549 ctcaaattaacagggggtaaaccgaaatttgctcaaattgcacgggggtaaaccgaattttcctcaaattatagggggcaaaattt 40765634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 41185156 - 41185055
Alignment:
Q  67 aaatttgctcaaattatagaggt--ttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaatt 164  Q
    |||||||||||||||| || ||   ||||||| |||||| ||||||||||| |  ||||||||| |||||||||||||| || |||| |||| |||||||    
T  41185156 aaatttgctcaaattacagggggggttaaacctaaatttgctcaaattacatga-gcaaaattttccatgaaggtccaa-aatcaaaaaatc-tcaaatt 41185060  T
Q  165 acaag 169  Q
    |||||    
T  41185059 acaag 41185055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 25962963 - 25963098
Alignment:
Q  37 aaatttgctcaaattaacagggg--caaatcgaaatttgctcaaattat-agaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    |||||||||||||||||||||||   ||| |||| ||| |||||||||| || ||  |||||| | |||| ||||||| ||||||    |||||| ||||    
T  25962963 aaatttgctcaaattaacaggggtttaaaccgaacttttctcaaattataaggggggtaaacctatatttgctcaaatcacaggggatgaaattttccat 25963062  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| | | ||| |||||| ||||| ||||    
T  25963063 gaaggtccaaaaccaaaaaaatctttaaatttcaag 25963098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 7e-37; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 20089372 - 20089228
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgca 122  Q
    ||||||||||| |||||||| |||||||||| ||||| |||| ||||||||||||||||| || || |||| ||||||||||||||||||||||||  ||    
T  20089372 agggggctaaaccaaaattttctcaaattaataggggtaaattgaaatttgctcaaattacagggggttaa-ccgaaattttctcaaattacaggggaca 20089274  T
Q  123 aaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||||||||||||| ||| ||| |||| ||||||||||||    
T  20089273 aaatttgccatgaaggtccaa-aacgaaaaaatcatcaaattacaag 20089228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 169
Target Start/End: Complemental strand, 21444091 - 21443946
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgca 122  Q
    |||| |||| |||||||||||||||||||||||||   ||| | |||||| |||||||||||  ||  |||||| |||||| ||||||||||||||||      
T  21444091 gggggtaaaccaaaatttgctcaaattaacaggggggtaaaccaaaattttctcaaattataagggggtaaacctaaatttgctcaaattacagggtgtg 21443992  T
Q  123 aaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||||||||||| ||||||| |||||||||||| ||||    
T  21443991 aaattttccatgaaggtccaa-aaccaaaaaatcttcaaatttcaag 21443946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 34436764 - 34436906
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    |||||| |||| | ||||||||||||||||||| |||| ||| | |||||||||||||||| |  ||  |||||| ||||||| |||||||||  || ||    
T  34436764 agggggttaaaacgaaatttgctcaaattaacacggggtaaaccaaaatttgctcaaattacaagggggtaaaccaaaattttatcaaattactaggggc 34436863  T
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaatta 165  Q
     ||||||||||||||||||||| ||||||| |||||||||||||    
T  34436864 gaaatttgccatgaaggtccaa-aaccaaaaaatcttcaaatta 34436906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 18268307 - 18268411
Alignment:
Q  37 aaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaa 136  Q
    ||||| |||||||||| ||||||  || | ||||||||||||||||||| ||  ||||||||||||||||||||| |||||| |||||||||||||||||    
T  18268307 aaattcgctcaaattatcaggggtgaaccaaaatttgctcaaattatag-ggggtaaaccgaaattttctcaaatcacaggg-gcaaaatttgccatgaa 18268404  T
Q  137 ggtccaa 143  Q
    |||||||    
T  18268405 ggtccaa 18268411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 21022547 - 21022470
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| ||||||||||||||||||||| || ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  21022547 taaaccaaaattttctcaaattacagggggcgaaatttgccatgaaggtccaa-aaccaaaaaatcttcaaattacaag 21022470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 169
Target Start/End: Complemental strand, 2240615 - 2240471
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacag-gggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaa 123  Q
    |||| |||||| |||||| |||||||||| || ||| ||| |||||||||||||||||  |||||  |||||| |||||| ||||||||| |||| ||||    
T  2240615 gggggtaaatcgaaattttctcaaattaatagagggtaaaccgaaatttgctcaaattgcagaggggtaaaccaaaatttcctcaaattatagggggcaa 2240516  T
Q  124 aatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||  |||||||||| || ||||||| |||||||||| ||||||    
T  2240515 aatttttcatgaaggtctaa-aaccaaaaaatcttcaaactacaag 2240471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 17051966 - 17052110
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaa 123  Q
    |||| |||| ||||||||||||||||||||| |||| ||| | |||||||||||||||| |  ||  |||||| |||||| |||||||||||||| |  |    
T  17051966 gggggtaaaccaaaatttgctcaaattaacaaggggtaaaccaaaatttgctcaaattacaaggggataaacctaaatttgctcaaattacagggagtga 17052065  T
Q  124 aatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||  ||||||||||||| ||| ||| |||||||||||||||||    
T  17052066 aatttttcatgaaggtccaa-aacaaaaaaatcttcaaattacaag 17052110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 20164331 - 20164184
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattacagggtg 120  Q
    |||||| |||| | ||||||||||||||||||| |||| ||||||||||||||||||||||  || ||  |||||| |||||||||||| ||||||||      
T  20164331 aggggggtaaaccgaaatttgctcaaattaacagggggtaaatcgaaatttgctcaaattacaaggggggtaaacctaaattttctcaatttacagggga 20164232  T
Q  121 caaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
      ||||||  ||||||||||||| ||||||| |||||||| ||||||||    
T  20164231 tgaaatttttcatgaaggtccaa-aaccaaaaaatcttcatattacaag 20164184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 168
Target Start/End: Original strand, 35158343 - 35158476
Alignment:
Q  37 aaatttgctcaaattaacaggggc---aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    ||||||||||||||||||| |||    ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| | ||||||| ||||    
T  35158343 aaatttgctcaaattaacatgggggttaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggggtaaaattttccat 35158442  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaa 168  Q
    |||||||||| ||||||| ||||||||||||||||    
T  35158443 gaaggtccaa-aaccaaaaaatcttcaaattacaa 35158476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 3401950 - 3402097
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtg 120  Q
    ||||||||||| | |||||  ||||||||||||||||   |||   ||||||||||||||| | | ||  ||||||||||||||||||||||||| || |    
T  3401950 agggggctaaaccgaaattcactcaaattaacaggggggtaaacaaaaatttgctcaaatttttggggcataaaccgaaattttctcaaattacaagggg 3402049  T
Q  121 caaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    | |||||| |||||||| || || ||||||| |||||||||||||||||    
T  3402050 cgaaattttccatgaagttctaa-aaccaaaaaatcttcaaattacaag 3402097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 15721091 - 15721224
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||||||||||   ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||| |||||    
T  15721091 aaatttgctcaaattaacaggggggtaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggagtgaaattttccatg 15721190  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| ||  |||||||||||||    
T  15721191 aaggtccaa-aaccaaaaaaatttcaaattacaag 15721224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 44448469 - 44448615
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    ||||||||||| |||||||  ||| ||||||||||||  ||| | |||||| |||||||| | | ||  ||||||||||||||||||||||||| || ||    
T  44448469 agggggctaaaccaaaattctctcgaattaacagggggtaaaccaaaattttctcaaatttttggggcataaaccgaaattttctcaaattacaaggggc 44448568  T
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     |||||| | |||||||||||| ||||||| ||| || ||||||||||    
T  44448569 gaaattttcgatgaaggtccaa-aaccaaaaaatattaaaattacaag 44448615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 165
Target Start/End: Original strand, 31749470 - 31749577
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaat 155  Q
    |||| |||||||||||||||||||||  || || | ||| |||||||| |||||||||||||| |||||||||  |||||||||| || ||||||| |||    
T  31749470 ggggtaaatcgaaatttgctcaaattgcagggggt-aaatcgaaatttcctcaaattacagggggcaaaatttttcatgaaggtctaa-aaccaaaaaat 31749567  T
Q  156 cttcaaatta 165  Q
    ||||||||||    
T  31749568 cttcaaatta 31749577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 24233513 - 24233590
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||| |||| | ||||||| |||||| ||||||||||    
T  24233513 taaaccaaaattttctcaaattacagggagcaaaatttgtcatgaaagtccga-aaccaaaaaatctttaaattacaag 24233590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 26254771 - 26254638
Alignment:
Q  37 aaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    ||||||||||||||||||| |||| ||| | ||||||||||||||||  || ||  |||||| |||||| ||||||||||| || |  |||||| || ||    
T  26254771 aaatttgctcaaattaacagggggtaaaccaaaatttgctcaaattacaaggggggtaaacctaaatttgctcaaattacaaggggtgaaattttccgtg 26254672  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| | ||||| |||||||||||||||||    
T  26254671 aaggtccaa-atccaaaaaatcttcaaattacaag 26254638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 13253498 - 13253636
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaaca--ggggcaaatcgaaatttgctcaaattata---gaggtttaaaccgaaattttctcaaattacagggt 119  Q
    |||| ||||||||||||||||||||||||||  |||| ||| | ||||||||||||||||||   ||||  |||||| |||||| |||||||||||| |     
T  13253498 gggggtaaatcaaaatttgctcaaattaacaggggggtaaaccaaaatttgctcaaattataagggagg--taaacctaaatttgctcaaattacagaga 13253595  T
Q  120 gcaaaatttgccatgaaggtccaagaaccaaagaatcttcaa 161  Q
    |  |||||| ||| ||| |||||| ||||||| |||||||||    
T  13253596 gtgaaattttccacgaacgtccaa-aaccaaaaaatcttcaa 13253636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 36374325 - 36374472
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattataga-ggtttaaaccgaaattttctcaaattacagggtg 120  Q
    |||||| |||| || |||||||||||||||||| |||| ||| |||| ||| ||||||||||| | ||  |||||| | |||| |||||||||||||| |    
T  36374325 aggggggtaaaccagaatttgctcaaattaacagggggtaaaccgaacttttctcaaattataaagggggtaaacctatatttgctcaaattacaggggg 36374424  T
Q  121 caaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
      |||||| || ||||||||||| ||||||| || ||||||||| ||||    
T  36374425 tgaaattttccgtgaaggtccaa-aaccaaaaaagcttcaaatttcaag 36374472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 168
Target Start/End: Original strand, 1572885 - 1573027
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaa 124  Q
    |||| |||||| |||||| || ||||||||| |||  || |||||||| |||||||||| |     |||||| ||||||||||| |||||| |  || ||    
T  1572885 gggggtaaatcgaaattttcttaaattaacaaggggtaaccgaaattttctcaaattattggcaggtaaaccaaaattttctcagattacatgaggcgaa 1572984  T
Q  125 atttgccatgaaggtccaagaaccaaagaatcttcaaattacaa 168  Q
    |||| |||| ||||||||| ||||||| ||||||||||||||||    
T  1572985 attttccataaaggtccaa-aaccaaaaaatcttcaaattacaa 1573027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 169
Target Start/End: Original strand, 41380556 - 41380681
Alignment:
Q  43 gctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtcc 141  Q
    |||||||||||||||||  ||| |||||||||||||||||| |  ||  |||||||||||||  ||||||||||||| |  ||||||  ||||||||| |    
T  41380556 gctcaaattaacagggggtaaaccgaaatttgctcaaattacaacggaataaaccgaaatttggtcaaattacagggagtgaaattt-tcatgaaggttc 41380654  T
Q  142 aagaaccaaagaatcttcaaattacaag 169  Q
    || || |||| |||||||||||||||||    
T  41380655 aa-aagcaaaaaatcttcaaattacaag 41380681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 2624585 - 2624484
Alignment:
Q  67 aaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattac 166  Q
    |||||||||||||||| |  ||  |||||| |||||| |||||||||||| | |  |||||| ||||||||| |||| ||||||| ||||||||||||||    
T  2624585 aaatttgctcaaattacaagggggtaaacctaaatttgctcaaattacagtgagtgaaattttccatgaaggcccaa-aaccaaaaaatcttcaaattac 2624487  T
Q  167 aag 169  Q
    |||    
T  2624486 aag 2624484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 14187818 - 14187705
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaa 154  Q
    |||| ||| |||||||||||||||||| | | ||  |||||| |||||||||| |||||||||| |  ||||||  ||||||||||||| ||||||| ||    
T  14187818 ggggtaaaccgaaatttgctcaaattacaaggggggtaaacctaaattttctctaattacagggggtgaaatttttcatgaaggtccaa-aaccaaaaaa 14187720  T
Q  155 tcttcaaattacaag 169  Q
    |||||| ||||||||    
T  14187719 tcttcatattacaag 14187705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 15994657 - 15994735
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||| |||||||  ||||||||||||| |||||||||||||||||||||||| |   ||| |||| ||||||||||||    
T  15994657 taaactgaaatttgttcaaattacagggggcaaaatttgccatgaaggtccaaaacgaaaaaaatcatcaaattacaag 15994735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 5864659 - 5864525
Alignment:
Q  37 aaatttgctcaaattaacaggggc---aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    ||||||| ||||||||||| |||    ||| |||||||| ||||||||| |  ||  |||| | |||||| |||||||||||||| | ||||||| ||||    
T  5864659 aaatttgatcaaattaacatgggggttaaaccgaaattttctcaaattacaagggggtaaaactaaatttgctcaaattacagggggtaaaattttccat 5864560  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||  |||| ||||||| |||||||||||||||||    
T  5864559 gaagaaccaa-aaccaaaaaatcttcaaattacaag 5864525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 2624785 - 2624655
Alignment:
Q  37 aaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacaggg-tgcaaaatttgccatg 134  Q
    ||||||||||||||||||| |||| ||| | |||||||||||||||| |  ||  |||||| |||||| |||||||||||||| ||  |||||| |||||    
T  2624785 aaatttgctcaaattaacagggggtaaaccaaaatttgctcaaattacaagggagtaaacctaaatttgctcaaattacagggatg--aaattttccatg 2624688  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||  || | ||||||| |||||| ||||||||||    
T  2624687 aag--cccaaaaccaaaaaatctttaaattacaag 2624655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 11576784 - 11576654
Alignment:
Q  37 aaatttgctcaaattaaca--ggggcaaatcgaaatttgctcaaattatagaggt-ttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    |||||||||||||||||||  |||| ||| |||||||||||||||||| | ||||  |||||| || ||| ||||||||||| || |  ||| || ||||    
T  11576784 aaatttgctcaaattaacataggggtaaaccgaaatttgctcaaattacaaaggtggtaaacctaattttgctcaaattacaaggggtgaaaatttccat 11576685  T
Q  134 gaaggtccaagaaccaaagaatcttcaaatta 165  Q
    |||||| ||| ||| ||| |||||||||||||    
T  11576684 gaaggttcaa-aactaaaaaatcttcaaatta 11576654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 13592940 - 13593003
Alignment:
Q  105 ctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||||||| ||||||||| ||||||||||| || ||| ||| |||||||||||||||||    
T  13592940 ctcaaattacagggggcaaaattttccatgaaggtctaa-aacaaaaaaatcttcaaattacaag 13593003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 26876706 - 26876599
Alignment:
Q  35 caaaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||||| |||||| | | | ||||||||| |||||| || || | |||  ||||||||||||||||| | || |||||||||  ||||    
T  26876706 caaaatttgctcaaattatcaggggtagaccaaaatttgcttaaattacagggggt-aaattgaaattttctcaaattataaggggcaaaatttatcatg 26876608  T
Q  135 aaggtccaa 143  Q
    |||||||||    
T  26876607 aaggtccaa 26876599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 143
Target Start/End: Complemental strand, 22317416 - 22317309
Alignment:
Q  37 aaatttgctcaaattaacagg-ggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||||||||||||| |||| || ||| | ||||||||||||| || |  ||  |||||  ||| ||||||||||||||||| ||  ||||||||||||    
T  22317416 aaatttgctcaaattaccaggaggtaaaccaaaatttgctcaaactacaatggggtaaactaaaactttctcaaattacagggggcggaatttgccatga 22317317  T
Q  136 aggtccaa 143  Q
    ||||||||    
T  22317316 aggtccaa 22317309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 17167686 - 17167763
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||||| |||||||||||||| | |||||||  |||||||||| || ||||||| ||| || ||||||||||    
T  17167686 taaaccgaaatttcctcaaattacagggggaaaaatttttcatgaaggtctaa-aaccaaaaaatatttaaattacaag 17167763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 32946471 - 32946548
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||||||| |||||||||||||   |||||||  |||||||||| || ||| ||| |||||||||||||||||    
T  32946471 taaaccgaaattttgtcaaattacaggggataaaatttttcatgaaggtctaa-aacaaaaaaatcttcaaattacaag 32946548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 10067916 - 10068048
Alignment:
Q  37 aaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||||||||||||| |||| ||| | |||||| ||||||||  || ||  ||||||||||||| ||||||||||| || | ||  |||  |||||    
T  10067916 aaatttgctcaaattaacagggggtaaaccaaaattttctcaaattgcag-ggggtaaaccgaaatttcctcaaattacaaggggaaatttttttcatga 10068014  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||| || | | ||| |||||||||||||||||    
T  10068015 aggtctaaaaccaaaaaaatcttcaaattacaag 10068048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 31750870 - 31750984
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattaca-gggtgcaaaatttgccatgaaggtccaagaaccaaaga 153  Q
    |||| ||| |||||||||||||||||| ||| ||  |||||| |||||| ||||||||||| ||| |  |||||| ||| | ||||| || ||||||| |    
T  31750870 ggggtaaaccgaaatttgctcaaattaataggggggtaaacctaaatttgctcaaattacaagggggtgaaattttccaggtaggtcaaa-aaccaaaaa 31750968  T
Q  154 atcttcaaattacaag 169  Q
    ||||||||||||||||    
T  31750969 atcttcaaattacaag 31750984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 34258262 - 34258189
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaatta 165  Q
    |||||| ||||||||||||||| ||||| ||  |||||  |||||||||| || ||||||| |||||||||||||    
T  34258262 taaaccaaaattttctcaaattccagggggcggaatttttcatgaaggtctaa-aaccaaaaaatcttcaaatta 34258189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 43707140 - 43707007
Alignment:
Q  37 aaatttgctcaaattaacaggg-gcaaatcgaaa-tttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||||||||| | ||| ||||| ||||||||||||| |  ||  |||||| ||||||  |||||||||||   |  ||||||  ||||    
T  43707140 aaatttgctcaaattaacagggtgtaaaccgaaattttgctcaaattacaagggggtaaacctaaatttgttcaaattacagaaagtgaaatttttcatg 43707041  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| ||  |||||||||||||    
T  43707040 aaggtccaa-aaccaaaaaaatttcaaattacaag 43707007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 38130989 - 38131127
Alignment:
Q  30 taaatcaaaatttgctcaaattaacaggggcaaatc-gaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaattt 128  Q
    |||| ||||||||||| |||||||  |||| ||| | ||||| ||||||||||  |  ||  |||||| |||||| |||||||||||||| || |||||     
T  38130989 taaaccaaaatttgctaaaattaaagggggaaaaaccgaaatatgctcaaatttcaagggggtaaacctaaatttgctcaaattacagggagcgaaattg 38131088  T
Q  129 gccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     ||||||| |||||| ||||||| || ||| ||||||||||    
T  38131089 tccatgaaagtccaa-aaccaaaaaacctt-aaattacaag 38131127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 40938332 - 40938403
Alignment:
Q  97 gaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||| ||||||||||||||    |||||| || ||||||||||| ||||||| |||||||||||| ||||    
T  40938332 gaaatttgctcaaattacaggggatgaaattttccgtgaaggtccaa-aaccaaaaaatcttcaaatttcaag 40938403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 5114197 - 5114343
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaa 123  Q
    |||| |||| |||||||||||||||||||||||||  ||| |||||||||||||||||||| |||  ||||||||||||| |||||||||||||| | ||    
T  5114197 gggggtaaaccaaaatttgctcaaattaacagggggtaaaccgaaatttgctcaaattataaaggggtaaaccgaaatttgctcaaattacagggggtaa 5114296  T
Q  124 aatttgccatgaaggtccaagaaccaaagaatcttcaaattacaagca 171  Q
    ||||| ||| |||||| ||| ||| ||| |||||||||||||||||||    
T  5114297 aattttccacgaaggttcaa-aactaaaaaatcttcaaattacaagca 5114343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 32682398 - 32682254
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    |||||| |||| | |||||| ||||||||||||||||  ||| | |||||||||||||||| || || | ||||| ||||||||||||||||||||| ||    
T  32682398 aggggggtaaaccgaaattttctcaaattaacagggggtaaaccaaaatttgctcaaattacagggggt-aaaccaaaattttctcaaattacaggg-gc 32682301  T
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||  |||||||||| || ||||||| |||||||||||||||||    
T  32682300 aaaatttttcatgaaggtctaa-aaccaaacaatcttcaaattacaag 32682254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 21507986 - 21508119
Alignment:
Q  37 aaatttgctcaaattaacag-gggcaaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||||| | ||  |||||| ||||||||||||||||||||| |  ||||||  ||||    
T  21507986 aaatttgctcaaattaacagagggtaaattgaaatttgctcaaattataaggggggtaaacctaaattttctcaaattacagggggtgaaatttttcatg 21508085  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     |||||||| ||||||| |||||||| ||||||||    
T  21508086 gaggtccaa-aaccaaaaaatcttcatattacaag 21508119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 29104322 - 29104456
Alignment:
Q  37 aaatttgctcaaattaacaggggc---aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    ||||||||||||||||||| |||    ||| |||||||| ||||||||| |  || ||| ||| |||||| |||||||||||||| | ||||||| ||||    
T  29104322 aaatttgctcaaattaacatgggggttaaaccgaaattttctcaaattacaagggattagacctaaatttgctcaaattacagggggtaaaattttccat 29104421  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| ||||||| |||||||||||||||||    
T  29104422 gaaggtccaa-aaccaaaaaatcttcaaattacaag 29104456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 49166807 - 49166939
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||||||||||||||| ||||  ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||| ||||||    
T  49166807 aaatttgctcaaattaacggggggtaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggagtgaaattttccatga 49166906  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| ||||||| |||||||||||||||||    
T  49166907 aggtccaa-aaccaaaaaatcttcaaattacaag 49166939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 3652432 - 3652566
Alignment:
Q  37 aaatttgctcaaattaacaggggc---aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    ||||||||| ||||||||| |||    ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| | ||||||| ||||    
T  3652432 aaatttgcttaaattaacatgggggttaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggggtaaaattttccat 3652531  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| ||||||| |||||||||||||||||    
T  3652532 gaaggtccaa-aaccaaaaaatcttcaaattacaag 3652566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 31226395 - 31226263
Alignment:
Q  37 aaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||| |  ||  |||||| | |||| |||||||||||||| |  ||||||  |||||    
T  31226395 aaatttgctcaaattaacaaggggtaaatcgaaatttgctcaaattacaagggggtaaacctatatttgctcaaattacagggggtgaaatttttcatga 31226296  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    | |||||| ||||||| |||||||||||| ||||    
T  31226295 aagtccaa-aaccaaaaaatcttcaaatttcaag 31226263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 41325426 - 41325294
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||| |  ||  |||||  ||||||||||||||||||||  |  ||||||  |||||    
T  41325426 aaatttgctaaaattaacagggggtaaatcgaaatttgctcaaattacaagggggtaaacataaattttctcaaattacaggaggtgaaatttttcatga 41325327  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| ||||||| |||||||| ||||||||    
T  41325326 aggtccaa-aaccaaaaaatcttcatattacaag 41325294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 49296215 - 49296087
Alignment:
Q  37 aaatttgctcaaattaacaggggcaaatc-gaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||||||||||||||||||||  || | ||||||| ||||||||| |  ||  |||||| ||||||||||||||||||||| |  |||||| ||||||    
T  49296215 aaatttgctcaaattaacagggggtaaactgaaattttctcaaattacaagggggtaaacctaaattttctcaaattacagggggtgaaattttccatga 49296116  T
Q  136 aggtccaagaaccaaagaatcttcaaatta 165  Q
    ||||| || ||||||| |||||||||||||    
T  49296115 aggtctaa-aaccaaaaaatcttcaaatta 49296087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 27626832 - 27626962
Alignment:
Q  37 aaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaa 136  Q
    ||||| |||||||||||| |||| ||| |||||||||||||||||| |  ||  |||||||||||||  ||||||||||||| |  ||||||  ||||||    
T  27626832 aaattcgctcaaattaacgggggtaaaccgaaatttgctcaaattacaacggaataaaccgaaatttggtcaaattacagggagtgaaattt-tcatgaa 27626930  T
Q  137 ggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||| || |||| |||||||||||||||||    
T  27626931 ggtccaa-aagcaaaaaatcttcaaattacaag 27626962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 39133240 - 39133378
Alignment:
Q  31 aaatcaaaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttg 129  Q
    ||||| ||||||||||||||||||| |||| ||| |||| ||||||||||||| |  ||  |||||| |||||| ||||||||||| ||||  ||||||     
T  39133240 aaatcgaaatttgctcaaattaacagggggtaaaccgaactttgctcaaattacaagggggtaaacctaaatttgctcaaattacaaggtgtgaaatttt 39133339  T
Q  130 ccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     |||||||||| || ||||||| |||||||||||| ||||    
T  39133340 tcatgaaggtctaa-aaccaaaaaatcttcaaatttcaag 39133378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 22854126 - 22854260
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||||||||||  ||||| |||||||||||||||||| | ||  |||||| ||||||||||||| ||||||| |  ||||||  ||||    
T  22854126 aaatttgctcaaattaacagggggtaaatcaaaatttgctcaaattataaggggggtaaacctaaattttctcaaactacagggggtgaaatttttcatg 22854225  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| | | ||| |||||||  ||||||||    
T  22854226 aaggtccaaaaccaaaaaaatcttcgtattacaag 22854260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 143
Target Start/End: Complemental strand, 7913327 - 7913219
Alignment:
Q  37 aaatttgctcaaattaacagg-ggcaaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||| | | ||  |||||| ||||||||||||||||||||| |  ||||||  ||||    
T  7913327 aaatttgctaaaattaacaggaggtaaatcgaaatttgctcaaattacaaggggggtaaacctaaattttctcaaattacagggggtgaaatttttcatg 7913228  T
Q  135 aaggtccaa 143  Q
    |||||||||    
T  7913227 aaggtccaa 7913219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 5514582 - 5514440
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacagggg-caaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    |||||| |||| | |||||| ||||||||||||||||  |||   |||||||||||||||| |  ||  |||||| |||||| ||||||||||| || |     
T  5514582 aggggggtaaaccgaaattttctcaaattaacaggggataaacaaaaatttgctcaaattacaaggggataaacctaaatttgctcaaattacaaggggt 5514483  T
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaatta 165  Q
     |||||| |||||||||||||| ||||||| |||||||||||||    
T  5514482 gaaattttccatgaaggtccaa-aaccaaaaaatcttcaaatta 5514440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 14121466 - 14121328
Alignment:
Q  30 taaatcaaaatttgctcaaattaaca--ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatt 127  Q
    |||||||||||||  |||||||||||  |||| ||| |||| ||||||||||||  || |||  |||| ||||||| |||||||||||||| ||||||||    
T  14121466 taaatcaaaattttgtcaaattaacaagggggtaaaccgaattttgctcaaattgcaggggt--aaactgaaatttcctcaaattacagggggcaaaatt 14121369  T
Q  128 tgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |  |||||||||| || || |||| |||||| ||||||||||    
T  14121368 tttcatgaaggtctaa-aatcaaaaaatcttgaaattacaag 14121328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 16589129 - 16589273
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggg-gcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    ||||||||||| ||||||| |||||||||||||||| | ||| ||||||||||| |||||| |  ||  |||||||||||||| ||||||||  | | |     
T  16589129 agggggctaaaccaaaattcgctcaaattaacagggagtaaaccgaaatttgcttaaattaca-cgggataaaccgaaattttatcaaattattgag-gg 16589226  T
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     ||||||| ||||||||||||| || |||| |||||||||||||||||    
T  16589227 gaaatttgtcatgaaggtccaa-aatcaaaaaatcttcaaattacaag 16589273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 4102939 - 4103051
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaat 155  Q
    |||| ||| |||||||||||||||||| |  ||  |||||| |||||||||||||||| |||| |  |||||| ||| |||||||||| ||||||| |||    
T  4102939 ggggtaaaccgaaatttgctcaaattagaagggggtaaacctaaattttctcaaattatagggggtgaaattttccacgaaggtccaa-aaccaaaaaat 4103037  T
Q  156 cttcaaattacaag 169  Q
    ||||||| ||||||    
T  4103038 cttcaaaatacaag 4103051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 50604084 - 50603956
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||| | |||  |||||| ||| || |||||||||| ||| |  |||||| ||||||    
T  50604084 aaattcgctcaaattaacagggggtaaatcgaaatttgctcaaattacaaaggggtaaacctaaaattgctcaaattaccgggagtgaaattttccatga 50603985  T
Q  136 aggtccaagaaccaaagaatcttcaaatta 165  Q
    ||||  || ||||||| |||||| ||||||    
T  50603984 aggtttaa-aaccaaaaaatctttaaatta 50603956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 30919077 - 30919210
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||| ||||||||||||||||   ||| |||||||| || |||||| |  ||  |||| | |||||| |||||||||||||| |  |||||| || ||    
T  30919077 aaatttactcaaattaacaggggggaaaaccgaaattttctaaaattacaagggggtaaatctaaatttgctcaaattacagggggtgaaattttccgtg 30919176  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||||||||||||    
T  30919177 aaggtccaa-aaccaaaaaatcttcaaattacaag 30919210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 49300898 - 49301030
Alignment:
Q  37 aaatttgctcaaattaacagg--ggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||| ||||||||||| ||  || |||||||||||||||||||||  || || | |||||||||||| |||||||||||||| || ||||||  | ||    
T  49300898 aaatttactcaaattaactggaaggtaaatcgaaatttgctcaaattgcaggggat-aaaccgaaatttcctcaaattacagggggccaaatttttcgtg 49300996  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| || ||  ||| |||||||||||||||||    
T  49300997 aaggtctaa-aataaaaaaatcttcaaattacaag 49301030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 18510137 - 18510277
Alignment:
Q  30 taaatcaaaatttgctcaaattaacag--gggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatt 127  Q
    |||||| ||||||||||||||||||||  ||| ||| | |||||| ||||||||| |  ||  || ||| |||||| ||||||||||| || |  |||||    
T  18510137 taaatcgaaatttgctcaaattaacaggtgggtaaaccaaaatttcctcaaattacaagggggtacacctaaatttgctcaaattacaaggggtgaaatt 18510236  T
Q  128 tgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    | |  ||||||||||| ||||||| |||||||||||||||||    
T  18510237 ttcattgaaggtccaa-aaccaaaaaatcttcaaattacaag 18510277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 25244584 - 25244472
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaat 155  Q
    |||| ||| ||||| |||||||||||  || ||  |||||| |||||| |||||||||||||| |||||| ||  |||||||||| || ||| ||| |||    
T  25244584 ggggtaaaccgaaaattgctcaaattgcaggggggtaaaccaaaatttcctcaaattacagggggcaaaaattttcatgaaggtctaa-aacaaaaaaat 25244486  T
Q  156 cttcaaattacaag 169  Q
    ||||||||||||||    
T  25244485 cttcaaattacaag 25244472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 14946106 - 14946252
Alignment:
Q  24 gggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgca 122  Q
    ||||| |||| | |||||||||||||||||||||||  ||| ||||||   ||||||||| |  ||  |||||| |||||| ||||||||||| || | |    
T  14946106 gggggataaaccgaaatttgctcaaattaacagggggtaaaccgaaataatctcaaattacaatggggtaaacctaaatttgctcaaattacaaggggta 14946205  T
Q  123 aaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||  ||||||||||||| |   ||| |||||||||||| ||||    
T  14946206 aaatttttcatgaaggtccaaaacaaaaaaaatcttcaaatttcaag 14946252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 50719809 - 50719886
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||| || ||||||||||| |  |||||| |||||||||||||| ||||||| ||||||||||| |||||    
T  50719809 taaacctaaatttgctaaaattacagggggtgaaattttccatgaaggtccaa-aaccaaaaaatcttcaaataacaag 50719886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 31857055 - 31857135
Alignment:
Q  37 aaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacaggg 118  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||| |  ||  | |||| |||||| ||||||||||||||    
T  31857055 aaatttgctcaaattaacagggg-aaaccgaaatttgcccaaattacaagggggttaacctaaatttgctcaaattacaggg 31857135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 15786080 - 15786139
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaa 151  Q
    ||||||||||||| |||||||||||||| |  |||||| |||||||||||| |||||||||    
T  15786080 taaaccgaaatttgctcaaattacagggggtgaaattttccatgaaggtcc-agaaccaaa 15786139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 33649037 - 33649143
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||||||||||||| ||| ||  ||| | ||||||||| ||||||||  || | |||| |||||||||  ||||||||||| |||||||||| |||||    
T  33649037 aaatttgctcaaattaccagtggataaaccaaaatttgcttaaattatatggggt-aaactgaaattttcataaattacagggggcaaaatttgtcatga 33649135  T
Q  136 aggtccaa 143  Q
    || |||||    
T  33649136 agttccaa 33649143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 36395461 - 36395415
Alignment:
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  36395461 aaaattttccatgaaggtccaa-aaccaaaaaatcttcaaattacaag 36395415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 49166796 - 49166855
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattaca 115  Q
    |||| ||| ||||||||||||||||||  | ||  |||||||||||||||||||||||||    
T  49166796 ggggtaaaccgaaatttgctcaaattaacggggggtaaaccgaaattttctcaaattaca 49166855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 17696224 - 17696147
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||| ||||||||||||||||  |||||| ||||||||||| || ||||||| | | |||||||| ||||    
T  17696224 taaacctaaatttgctcaaattacagggtgtgaaattttccatgaaggtctaa-aaccaaaaagttttcaaatttcaag 17696147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 23184941 - 23185018
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||||||||||||||| || |  ||||||  ||||||||||||| ||||||| ||  |||||||||||||    
T  23184941 taaacctaaattttctcaaattacaaggggtgaaatttttcatgaaggtccaa-aaccaaaaaaatttcaaattacaag 23185018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 24675465 - 24675542
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| ||||||||||||||||||||| |  ||||||  |||||| |||||| || |||| |||| ||||||||||||    
T  24675465 taaacctaaattttctcaaattacagggggtgaaatttttcatgaaagtccaa-aatcaaaaaatcatcaaattacaag 24675542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 42056140 - 42056228
Alignment:
Q  37 aaatttgctcaaattaac-aggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaa 125  Q
    |||||||||||||||||| | ||| ||| | |||||||||||||||  || || | |||||||||||| ||||||||| |||| ||||||    
T  42056140 aaatttgctcaaattaaccaagggtaaaccaaaatttgctcaaattgcaggggat-aaaccgaaatttcctcaaattatagggggcaaaa 42056228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 124
Target Start/End: Original strand, 46088268 - 46088301
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaa 124  Q
    |||||||||||||||||||||||||||| |||||    
T  46088268 taaaccgaaattttctcaaattacagggggcaaa 46088301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 52194384 - 52194332
Alignment:
Q  30 taaatcaaaatttgctcaaattaacagg-ggcaaatcgaaatttgctcaaatt 81  Q
    |||| |||||||| |||||||||||||| || ||| |||||||||||||||||    
T  52194384 taaaccaaaattttctcaaattaacaggaggtaaaccgaaatttgctcaaatt 52194332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 39752087 - 39751943
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    ||||||||||| ||||||||  |||||||||||||||  ||| |||||||||||||||| | || ||  |||||| |||||||||||||| ||| || ||    
T  39752087 agggggctaaaccaaaattttttcaaattaacagggggtaaaccgaaatttgctcaaatcacaggggggtaaaccaaaattttctcaaatgacaaggggc 39751988  T
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaattaca 167  Q
     ||||||||||||||||||||| ||||||| |||||||||||||||    
T  39751987 gaaatttgccatgaaggtccaa-aaccaaaaaatcttcaaattaca 39751943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 10071357 - 10071211
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    |||| |||||||||||||||||||||||||||| |||| ||| |||||||||||||||| | |  |   |||||| |||||||||||||| ||| || ||    
T  10071357 agggagctaaatcaaaatttgctcaaattaacaaggggtaaaccgaaatttgctcaaatcacaaggaggtaaaccaaaattttctcaaatgacaaggggc 10071258  T
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     ||||||||||||||||||||| ||||||| |||||| ||||||||||    
T  10071257 gaaatttgccatgaaggtccaa-aaccaaaaaatcttaaaattacaag 10071211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 37 - 168
Target Start/End: Complemental strand, 18756563 - 18756432
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||| ||||||    
T  18756563 aaatttgctcaaattaacagggggtaaaccgaaatttgctcaaattacaagggggtaaacctaaatttgctcaaattacagggagtgaaattttccatga 18756464  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaa 168  Q
    |||||||| ||||||| ||||||||||||||||    
T  18756463 aggtccaa-aaccaaaaaatcttcaaattacaa 18756432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 43830729 - 43830584
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    |||||| |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||  ||  |||||| ||||||||||||| ||||||| |     
T  43830729 aggggggtaaatcgaaatttgctcaaattaacagggggtaaatcgaaatttgctcaaattataagggggtaaacctaaattttctcaaactacaggg-gt 43830631  T
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     ||||||  ||||||||||||| ||||||| |||||||  ||||||||    
T  43830630 gaaatttttcatgaaggtccaa-aaccaaaaaatcttcgtattacaag 43830584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 1975696 - 1975564
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||| |  ||  |||||| ||||||||||||||||||||| |  ||||||  |||||    
T  1975696 aaatttgctaaaattaacaggggataaatcgaaatttgctcaaattacaagggggtaaacctaaattttctcaaattacagggggtgaaatttttcatga 1975597  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| ||||||| |||||||| ||||||||    
T  1975596 aggtccaa-aaccaaaaaatcttcatattacaag 1975564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 7007986 - 7007855
Alignment:
Q  37 aaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||| ||||||||||| |||| ||| | ||||||||| |||||  || || | ||||||||||||||||||||||||||| ||||||||| ||||||    
T  7007986 aaatttgttcaaattaacaaggggtaaaccaaaatttgcttaaattgcagggggt-aaaccgaaattttctcaaattacagggggcaaaattttccatga 7007888  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||| || || |||| |||||||||||||||||    
T  7007887 aggtctaa-aagcaaaaaatcttcaaattacaag 7007855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 15543927 - 15543795
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||||||||||||||| ||||  ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||| ||||||    
T  15543927 aaatttgctcaaattaacggggggtaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggagtgaaattttccatga 15543828  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| ||||||| |||||||||||||||||    
T  15543827 aggtccaa-aaccaaaaaatcttcaaattacaag 15543795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 18048965 - 18049112
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattata---gaggtttaaaccgaaattttctcaaattacaggg 118  Q
    |||||| |||| | ||||||| |||||||||||||||  |||||||||||||||||||||| |   |||||  ||||| |||||||||||||||||||||    
T  18048965 aggggggtaaaccgaaatttggtcaaattaacagggggtaaatcgaaatttgctcaaattacaagggaggt--aaacctaaattttctcaaattacaggg 18049062  T
Q  119 tgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     |  ||||||  ||||||||||||| ||||||| |||||||| ||||||||    
T  18049063 ggtgaaatttttcatgaaggtccaa-aaccaaaaaatcttcatattacaag 18049112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 19272823 - 19272957
Alignment:
Q  37 aaatttgctcaaattaacaggggc---aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    ||||||||||||||||||| |||    ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| | ||||||| ||||    
T  19272823 aaatttgctcaaattaacatgggggttaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggggtaaaattttccat 19272922  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| ||||||| |||||||||||||||||    
T  19272923 gaaggtccaa-aaccaaaaaatcttcaaattacaag 19272957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 42794173 - 42794305
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||| ||||||||||||||||  ||||||||||||||||||||||||  ||  |||||| ||||||||||||| ||||||| |  ||||||  |||||    
T  42794173 aaattttctcaaattaacagggggtaaatcgaaatttgctcaaattataagggggtaaacctaaattttctcaaactacagggggtgaaatttttcatga 42794272  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| ||||||| |||||||  ||||||||    
T  42794273 aggtccaa-aaccaaaaaatcttcgtattacaag 42794305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 17188809 - 17188732
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||||||||||| || |||| |||||||||||||||||    
T  17188809 taaaccgaaattttatcaaattacagggagcaaaaattgccatgaaggtccaa-aatcaaaaaatcttcaaattacaag 17188732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 143
Target Start/End: Original strand, 28581599 - 28581721
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggg---gcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggt 119  Q
    |||||| |||| | |||||||||||||||| |||||   ||||| | |||||| |||||||||||| |||| |||  ||||||||||||||||||||||     
T  28581599 aggggggtaaaccgaaatttgctcaaattatcagggagggcaaaccaaaattttctcaaattataggggtt-aaattgaaattttctcaaattacagggg 28581697  T
Q  120 gcaaaatttgccatgaaggtccaa 143  Q
    || |||||||||||||| ||||||    
T  28581698 gcgaaatttgccatgaaagtccaa 28581721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 41100841 - 41100987
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    ||||||||||  | |||||| | |||| |||||||||  ||| | ||||||||||||||| | | |   |||||||||||||||||||||||||||| ||    
T  41100841 agggggctaatccgaaattttcacaaagtaacagggggtaaaccaaaatttgctcaaatttttgggtgataaaccgaaattttctcaaattacagggggc 41100940  T
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     ||||||  ||||||| ||||| ||||||| |||||||||||||||||    
T  41100941 gaaatttttcatgaagatccaa-aaccaaaaaatcttcaaattacaag 41100987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 11839251 - 11839136
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacag-gggcaaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgca 122  Q
    |||||||||  ||||||| ||||||||| ||| ||| |||| ||||||||||||||||| | |||||| |  || ||||||||||||||||||||| |||    
T  11839251 ggggctaaacaaaaattttctcaaattaccagagggtaaattgaaatttgctcaaattacaagaggttga--ccaaaattttctcaaattacagggggca 11839154  T
Q  123 aaatttgccatgaaggtc 140  Q
    |||||||| |||||||||    
T  11839153 aaatttgctatgaaggtc 11839136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 16138990 - 16139094
Alignment:
Q  65 cgaaatttgctcaaattat-agaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaat 163  Q
    ||||||||||||||||||  || ||  ||||||||||||| |||||| ||||||| |  |||||| |||||||||||||| ||||||| |||||||||||    
T  16138990 cgaaatttgctcaaattaacagggggctaaaccgaaatttgctcaaaatacagggagtgaaattttccatgaaggtccaa-aaccaaaaaatcttcaaat 16139088  T
Q  164 tacaag 169  Q
    ||||||    
T  16139089 tacaag 16139094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 36525438 - 36525570
Alignment:
Q  37 aaatttgctcaaattaacaggg-gcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||||||||||| |||| | ||| |||||||||||||||||  || ||  ||||| ||||||| |||||||||||||| | ||  |||  |||||    
T  36525438 aaatttgctcaaattaatagggtgtaaaccgaaatttgctcaaattgcaggggggtaaactgaaatttcctcaaattacagggggaaatttttttcatga 36525537  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||| || ||||||| |||||||||||||||||    
T  36525538 aggtctaa-aaccaaaaaatcttcaaattacaag 36525570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 38127923 - 38128056
Alignment:
Q  37 aaatttgctcaaattaaca---ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    |||||||||||||||||||   |||  ||| |||||||| ||||||||| |  || | ||| | |||||| |||||||||||||| | ||||||| ||||    
T  38127923 aaatttgctcaaattaacattggggttaaaccgaaattttctcaaattacatgggat-aaatctaaatttgctcaaattacagggggtaaaattttccat 38128021  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| ||||||| |||||||||||||||||    
T  38128022 gaaggtccaa-aaccaaaaaatcttcaaattacaag 38128056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 18755245 - 18755107
Alignment:
Q  30 taaatcaaaatttgctcaaattaacaggggcaaatc-gaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaattt 128  Q
    |||| |||||||||||||||||||| ||||  || | ||||||||||||||||| |  ||  |||||| |||||| |||||||||||||| |  ||||||    
T  18755245 taaaccaaaatttgctcaaattaactgggggtaaactgaaatttgctcaaattacaagggggtaaacctaaatttgctcaaattacagggagtgaaattt 18755146  T
Q  129 gccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     |||||||||||||| ||||||| |||| | ||||||||||    
T  18755145 tccatgaaggtccaa-aaccaaa-aatcctgaaattacaag 18755107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 29949717 - 29949848
Alignment:
Q  37 aaatttgctcaaattaacaggg--gcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||| |||||||||| ||||  | ||||||||||||||||||||| | | ||  |||||| |||||| ||||||||| |||| |||||||||  ||||    
T  29949717 aaatttcctcaaattaatagggaggtaaatcgaaatttgctcaaattgtggcgg--taaaccaaaatttcctcaaattatagggggcaaaatttttcatg 29949814  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| || ||||||| ||| |||||||||||||    
T  29949815 aaggtctaa-aaccaaaaaattttcaaattacaag 29949848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 33218539 - 33218405
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    |||||||||||||||||||||||   ||| |||| ||| ||||||||||| | ||  |||||| | |||| |||||||||||||| |  |||||| ||||    
T  33218539 aaatttgctcaaattaacaggggtttaaaccgaacttttctcaaattataaggggggtaaacctatatttgctcaaattacagggggtgaaattttccat 33218440  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| ||||||| |||||||||||| ||||    
T  33218439 gaaggtccaa-aaccaaaaaatcttcaaatttcaag 33218405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 165
Target Start/End: Original strand, 7318289 - 7318358
Alignment:
Q  95 ccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaatta 165  Q
    |||||||||||||||||||||||| |  |||||| |||||||||||||| ||||||| |||||||||||||    
T  7318289 ccgaaattttctcaaattacagggggtgaaattttccatgaaggtccaa-aaccaaaaaatcttcaaatta 7318358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 9419720 - 9419580
Alignment:
Q  30 taaatcaaaatttgctcaaattaacaggggca--aatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatt 127  Q
    |||||| ||||||||||||||||||||| | |  || | |||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||    
T  9419720 taaatcgaaatttgctcaaattaacaggtggataaaccaaaatttcctcaaattacaagggggtaaacctaaatttgctcaaattacagggggtgaaatt 9419621  T
Q  128 tgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    | |  ||||||||||| ||||||| |||||||||||||||||    
T  9419620 ttcattgaaggtccaa-aaccaaaaaatcttcaaattacaag 9419580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 165
Target Start/End: Original strand, 38950006 - 38950146
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtt-taaaccgaaattttctcaaattacagggtgca 122  Q
    |||| |||||| |||||| ||||||||||||||||  ||| | |||||| ||||||||| | ||||  |||||| |||||| |||||||||||||| |      
T  38950006 gggggtaaatcgaaattttctcaaattaacagggggtaaaccaaaattttctcaaattaca-aggtggtaaacctaaatttgctcaaattacagggagtg 38950104  T
Q  123 aaatttgccatgaaggtccaagaaccaaagaatcttcaaatta 165  Q
    |||||| |||||||||||||| ||| ||| |||||||||||||    
T  38950105 aaattttccatgaaggtccaa-aacaaaaaaatcttcaaatta 38950146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 22984056 - 22984143
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaat 111  Q
    |||| |||||| ||||||||||||||||||| ||||| ||| ||||||||| |||||||| | |||  ||||||||||||| |||||||    
T  22984056 agggagctaaaccaaaatttgctcaaattaataggggtaaaccgaaatttgttcaaatta-ataggggtaaaccgaaatttgctcaaat 22984143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 169
Target Start/End: Original strand, 34831655 - 34831787
Alignment:
Q  38 aatttgctcaaattaacaggggcaaatc-gaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaa 136  Q
    ||||||||||||||||||||||  || | ||||||||||||||||| |  ||  |||||| |||||| ||||||||| | || |  |||||| |||||||    
T  34831655 aatttgctcaaattaacagggggtaaactgaaatttgctcaaattacaagggggtaaacctaaatttgctcaaattaaatggagtgaaattttccatgaa 34831754  T
Q  137 ggtccaagaaccaaagaatcttcaaattacaag 169  Q
     |||||| | | ||| |||||||||||||||||    
T  34831755 agtccaaaaccaaaaaaatcttcaaattacaag 34831787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 168
Target Start/End: Complemental strand, 36795366 - 36795235
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||| ||||||||||||||||  ||||  ||||||||||||||| |||     |||||||||||||  ||||||||||||| | |||||||  |||||    
T  36795366 aaattttctcaaattaacagggggtaaattaaaatttgctcaaattgtaggaaggtaaaccgaaatttcttcaaattacagggggtaaaatttttcatga 36795267  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaa 168  Q
    ||||| || ||||||| |||||| |||||||||    
T  36795266 aggtctaa-aaccaaaaaatctttaaattacaa 36795235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 16204521 - 16204389
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||| |||||||||||| |||  ||| |||||||| ||||||||| |  |   |||||| |||||| ||||||||  |||| |  |||||| ||||||    
T  16204521 aaattttctcaaattaacaagggataaaccgaaatttcctcaaattacaaggagataaacctaaatttgctcaaattgtagggagtgaaattttccatga 16204422  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| ||||||| |||||||||||||||||    
T  16204421 aggtccaa-aaccaaaaaatcttcaaattacaag 16204389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 29884078 - 29884210
Alignment:
Q  37 aaatttgctcaaattaacaggg-gcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||| ||||||||||||||| | ||| |||||||||||||||||  || || | || |||||||||||||||||||||||| | ||  |||  |||||    
T  29884078 aaattttctcaaattaacagggagtaaaccgaaatttgctcaaattgcagggggt-aagccgaaattttctcaaattacagggggaaatttttttcatga 29884176  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||  | | | ||| |||||||||||||||||    
T  29884177 aggtctgaaaccaaaaaaatcttcaaattacaag 29884210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 26498724 - 26498595
Alignment:
Q  37 aaatttgctcaaattaacag--gggcaaatcgaaatttgctcaaattatagaggtt-taaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    |||||| |||||||||||||  ||||||| ||||||||  |||||||| || ||   |||||| |||||| |||||||||||||| |||||| ||  |||    
T  26498724 aaattttctcaaattaacagaggggcaaaccgaaatttattcaaattacagggggggtaaaccaaaatttcctcaaattacaggg-gcaaaaattttcat 26498626  T
Q  134 gaaggtccaagaaccaaagaatcttcaaatta 165  Q
    ||||||| || ||||||| |||||||||||||    
T  26498625 gaaggtctaa-aaccaaaaaatcttcaaatta 26498595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 31122118 - 31122225
Alignment:
Q  37 aaatttgctcaaattaacagg-ggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||||||||||||||| || ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| |   ||||| | ||||    
T  31122118 aaatttgctcaaattaacaggaggtaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggggtggaattttcaatga 31122217  T
Q  136 aggtccaa 143  Q
    ||||||||    
T  31122218 aggtccaa 31122225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 168
Target Start/End: Original strand, 39373154 - 39373255
Alignment:
Q  65 cgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaatt 164  Q
    |||||||||||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||| |||||||||| ||| || |||| ||||||||||||    
T  39373154 cgaaatttgctcaaattacaagggggtaaacctaaatttgctcaaattacaggg-gtgaaattttccatgaaggttcaa-aatcaaaaaatcttcaaatt 39373251  T
Q  165 acaa 168  Q
    ||||    
T  39373252 acaa 39373255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 776432 - 776355
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||| |||||||||||||| |  ||| || |||||||||||||| ||||||| |||||||||||| ||||    
T  776432 taaacctaaatttgctcaaattacagggggtgaaaatttccatgaaggtccaa-aaccaaaaaatcttcaaatttcaag 776355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 4158038 - 4157957
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacaggg 118  Q
    ||||||||||||||||| |||||  ||| |||||||| ||||||||| | |||  |||||| |||||||||||||||||||||    
T  4158038 aaatttgctcaaattaagagggggtaaaccgaaattt-ctcaaattacaaaggggtaaacctaaattttctcaaattacaggg 4157957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 22984100 - 22984178
Alignment:
Q  37 aaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattaca 115  Q
    ||||||| ||||||||| ||||| ||| |||||||||||||||| | |  ||  |||||| ||||||||||||||||||    
T  22984100 aaatttgttcaaattaataggggtaaaccgaaatttgctcaaatcacatgggggtaaaccaaaattttctcaaattaca 22984178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 11673832 - 11673724
Alignment:
Q  60 caaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttc 159  Q
    |||| ||||||||||||||||||    ||  |||| | |||||| ||||||||||||||  ||||||||  |||||||||| || ||| ||| |||||||    
T  11673832 caaaccgaaatttgctcaaattaacagggggtaaagcaaaatttgctcaaattacaggggacaaaatttttcatgaaggtctaa-aacaaaaaaatcttc 11673734  T
Q  160 aaattacaag 169  Q
    ||||||||||    
T  11673733 aaattacaag 11673724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 31989566 - 31989606
Alignment:
Q  128 tgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  31989566 tgccatgaaggtccaa-aaccaaagaatcttcaaattacaag 31989606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 33315327 - 33315403
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaa 168  Q
    |||||| |||||| ||||||||||| ||| | ||||| ||||||||||| ||| |||||||  |||||||||||||||    
T  33315327 taaaccaaaatttgctcaaattacaaggtacgaaattggccatgaaggt-caaaaaccaaaacatcttcaaattacaa 33315403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 24759108 - 24759156
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggt 139  Q
    ||||| |||||||||||||||||||||| || |||||| ||||||||||    
T  24759108 taaactgaaattttctcaaattacagggggcgaaattttccatgaaggt 24759156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 15543938 - 15543879
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattaca 115  Q
    |||| ||| ||||||||||||||||||  | ||  |||||||||||||||||||||||||    
T  15543938 ggggtaaaccgaaatttgctcaaattaacggggggtaaaccgaaattttctcaaattaca 15543879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 25293485 - 25293417
Alignment:
Q  98 aaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||||||||||| | ||||||| |||||||||||||| || |||| |||||||||||||||||    
T  25293485 aaatttgctcaaattacaggg-gtaaaattttccatgaaggtccaa-aatcaaa-aatcttcaaattacaag 25293417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 31260736 - 31260665
Alignment:
Q  97 gaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaa 168  Q
    |||||||| |||||||| |||| |||||||||| ||||||||||||| | | ||| |||| | |||||||||    
T  31260736 gaaattttttcaaattaaagggggcaaaatttgtcatgaaggtccaaaatcaaaaaaatcctaaaattacaa 31260665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 165
Target Start/End: Original strand, 16260671 - 16260804
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacag----ggtgcaaaatttgc 130  Q
    |||||||||| ||||||||||||   ||| |||||||| ||||||||| |  ||  |||||| |||||| ||||||||||||    || |  |||||| |    
T  16260671 aaatttgctccaattaacaggggggtaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagacagggagtgaaattttc 16260770  T
Q  131 catgaaggtccaagaaccaaagaatcttcaaatta 165  Q
    ||||||||||||| ||| ||| |||||||||||||    
T  16260771 catgaaggtccaa-aactaaaaaatcttcaaatta 16260804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 25103962 - 25103814
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacag--gggcaaatcgaaatttgctcaaattat-agaggtttaaaccgaaattttctcaaattacagggt 119  Q
    |||||| |||| | ||||||||||||||||||||  ||| ||| |||| ||| | |||||||| || ||  |||||| | |||| ||||||||||||||     
T  25103962 aggggggtaaaccgaaatttgctcaaattaacaggagggtaaaccgaacttttcccaaattataaggggggtaaacctatatttgctcaaattacagggg 25103863  T
Q  120 gcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |   ||||| |||| ||||||||| ||||||| ||| |||||||| ||||    
T  25103862 gtgcaattttccataaaggtccaa-aaccaaaaaatgttcaaatttcaag 25103814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 28781810 - 28781733
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| || | |||||||||||| |||||||||   ||||||||| || ||||||| |||||| ||||||||||    
T  28781810 taaaccgaaacttccacaaattacagggggcaaaattttttatgaaggtctaa-aaccaaaaaatctttaaattacaag 28781733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 33218550 - 33218492
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaatt-atagaggtttaaaccgaaattttctcaaatta 113  Q
    |||| ||| ||||||||||||||||| | || ||||||||||||| |||||||||||||    
T  33218550 ggggtaaaccgaaatttgctcaaattaacaggggtttaaaccgaacttttctcaaatta 33218492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 2526533 - 2526644
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaat 155  Q
    |||| ||||| |||||| |||||||| ||| || | |||||||||||| ||||||||| |||| |  ||| ||  |||||||||| || ||||||| |||    
T  2526533 ggggtaaatcaaaattttctcaaattgtaggggat-aaaccgaaatttcctcaaattagagggggtgaaaattttcatgaaggtctaa-aaccaaaaaat 2526630  T
Q  156 cttcaaattacaag 169  Q
    ||| ||||||||||    
T  2526631 ctttaaattacaag 2526644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 19253561 - 19253638
Alignment:
Q  37 aaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaatta 113  Q
    ||||| ||||||||||||| |||| ||| |||||||||||||||||| |  ||  |||||||||||||  ||||||||    
T  19253561 aaattcgctcaaattaacagggggtaaaccgaaatttgctcaaattacaacggaataaaccgaaatttggtcaaatta 19253638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 22846205 - 22846093
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaat 155  Q
    |||| ||| |||||||| ||||||||| |  ||  |||||| |||||| ||| ||| ||||||    |||||| |||||||||||||| ||||||| |||    
T  22846205 ggggtaaaccgaaatttcctcaaattacaagggggtaaacctaaatttgctctaataacaggggatgaaattttccatgaaggtccaa-aaccaaaaaat 22846107  T
Q  156 cttcaaattacaag 169  Q
     |||||||||||||    
T  22846106 attcaaattacaag 22846093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 31377762 - 31377802
Alignment:
Q  128 tgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  31377762 tgccatgaaggtccaa-aaccaaataatcttcaaattacaag 31377802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 16260660 - 16260720
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattat-agaggtttaaaccgaaattttctcaaattaca 115  Q
    |||||||| |||||||||||| |||||  || ||  |||||||||||||||||||||||||    
T  16260660 ggggcaaaccgaaatttgctccaattaacaggggggtaaaccgaaattttctcaaattaca 16260720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 30497337 - 30497380
Alignment:
Q  30 taaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttg 73  Q
    |||||||||||||||||||||| |||||||| |||||||||||||    
T  30497337 taaatcaaaatttgctcaaatt-acaggggctaaatcgaaatttg 30497380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 300317 - 300462
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgca 122  Q
    |||| |||| |||||||||||||||||||||||||   ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| |      
T  300317 gggggtaaaccaaaatttgctcaaattaacaggggggtaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggagtg 300416  T
Q  123 aaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||||    
T  300417 aaattttccatgaaggtccaa-aaccaaaaaatcttcaaattacaag 300462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 25024766 - 25024622
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacag-gggcaaatcgaaatttgctcaaattatagaggtt-taaaccgaaattttctcaaattacagggtg 120  Q
    |||||||||||||||||||||||||||||||||| ||| ||| | |||||| || |||| | |||||   |||||| |||||| || ||||||||||  |    
T  25024766 agggggctaaatcaaaatttgctcaaattaacagagggtaaaccaaaattttctaaaatcacagagggggtaaaccaaaatttgctaaaattacaggtgg 25024667  T
Q  121 caaaatttgccatgaaggtccaagaaccaaagaatcttcaaattac 166  Q
    | ||||||||||||||||||||| ||| ||| ||||||||||||||    
T  25024666 cgaaatttgccatgaaggtccaa-aacaaaaaaatcttcaaattac 25024622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 52839513 - 52839379
Alignment:
Q  37 aaatttgctcaaattaacaggggc---aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    ||||||||||||||||||| |||    ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| | ||||||| ||||    
T  52839513 aaatttgctcaaattaacatgggggttaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggggtaaaattttccat 52839414  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| ||||||| |||||||||||||||||    
T  52839413 gaaggtccaa-aaccaaaaaatcttcaaattacaag 52839379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 28735604 - 28735737
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    ||||||||||||||| |||||||  ||| | |||||||||||||||| | | || ||||||| ||||||||||||||||||||| |  ||| || ||| |    
T  28735604 aaatttgctcaaattcacagggggtaaaccaaaatttgctcaaattacaagggggttaaacctaaattttctcaaattacagggggtgaaaatttccagg 28735703  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||||||||||||    
T  28735704 aaggtccaa-aaccaaaaaatcttcaaattacaag 28735737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 14220582 - 14220450
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||| |  ||  |||||| ||||||||||||||||||||| |  ||||||  |||||    
T  14220582 aaatttgctaaaattaacagggggtaaatcgaaatttgctcaaattacaagggggtaaacctaaattttctcaaattacagggggtgaaatttttcatga 14220483  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| ||||||| ||  |||| ||||||||    
T  14220482 aggtccaa-aaccaaaaaaatttcatattacaag 14220450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 14224809 - 14224677
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||| |  ||  |||||| ||||||||||||||||||||| |  ||||||  |||||    
T  14224809 aaatttgctaaaattaacagggggtaaatcgaaatttgctcaaattacaagggggtaaacctaaattttctcaaattacagggggtgaaatttttcatga 14224710  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| ||||||| ||  |||| ||||||||    
T  14224709 aggtccaa-aaccaaaaaaatttcatattacaag 14224677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 169
Target Start/End: Original strand, 48689260 - 48689367
Alignment:
Q  61 aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttca 160  Q
    ||||||||| |||||||||||| |  ||  |||||| |||||| ||||||||||||||||  |||||| |||||||||||||| || |||| ||||||||    
T  48689260 aaatcgaaacttgctcaaattacaagggggtaaacctaaatttgctcaaattacagggtgtgaaattttccatgaaggtccaa-aatcaaaaaatcttca 48689358  T
Q  161 aattacaag 169  Q
    |||||||||    
T  48689359 aattacaag 48689367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 3505214 - 3505081
Alignment:
Q  37 aaatttgctcaaattaacaggggca--aatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||| |||||||||||||||| |  || |||||||||||||||||| |  ||  |||||| |||||| ||||||||||| || |  |||||| |||||    
T  3505214 aaatttactcaaattaacagggggataaaccgaaatttgctcaaattacaagggggtaaacctaaatttgctcaaattacaaggggtgaaattttccatg 3505115  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     |||||||| ||||||| |||||||||||||||||    
T  3505114 gaggtccaa-aaccaaaaaatcttcaaattacaag 3505081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 26770143 - 26770001
Alignment:
Q  27 ggctaaatcaaaatttgctcaaattaacaggggcaaatcgaaa-tttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaa 125  Q
    ||||||| | |||||  ||||||||||||||||  || | ||| |||||||||||| | | ||  |||||| |||||||||||||||||| || || |||    
T  26770143 ggctaaaccgaaattcactcaaattaacagggggtaaaccaaagtttgctcaaatttttggggcataaaccaaaattttctcaaattacaaggggcgaaa 26770044  T
Q  126 tttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||| |||||||||||||| || |||| |||||||||||||||||    
T  26770043 ttttccatgaaggtccaa-aagcaaaaaatcttcaaattacaag 26770001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 14870152 - 14870012
Alignment:
Q  30 taaatcaaaatttgctcaaattaaca--ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatt 127  Q
    |||| |||||||||||||||||||||  | || ||| |||||||||||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||    
T  14870152 taaagcaaaatttgctcaaattaacatggaggtaaaccgaaatttgctcaaattacaagggggtaaacctaaatttgctcaaattacagggggtgaaatt 14870053  T
Q  128 tgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |  || |||||| ||| ||||||| |||||||||||||||||    
T  14870052 tttcacgaaggttcaa-aaccaaaaaatcttcaaattacaag 14870012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 7226222 - 7226333
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaat 155  Q
    |||| ||| |||||||||||||||||  || || | |||||||||||| |||||||||||||| |||||||||  |||||||||| || ||| ||| |||    
T  7226222 ggggtaaaccgaaatttgctcaaattgcagggggt-aaaccgaaatttcctcaaattacagggggcaaaatttttcatgaaggtctaa-aacaaaaaaat 7226319  T
Q  156 cttcaaattacaag 169  Q
    ||||||||||||||    
T  7226320 cttcaaattacaag 7226333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 4658685 - 4658609
Alignment:
Q  67 aaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaa 143  Q
    |||||| || |||||| || ||| ||||||||| ||||| ||||||| |||||||||||||||||||||||||||||    
T  4658685 aaattttcttaaattacaggggtgtaaaccgaatttttcacaaattagagggtgcaaaatttgccatgaaggtccaa 4658609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 22818036 - 22818177
Alignment:
Q  30 taaatcaaaatttgctcaaattaacaggggc---aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaat 126  Q
    |||| ||||||||||||||||||||| |||    ||| |||||||| || |||||| |  ||  |||||| |||||| ||||||||||||||   |||||    
T  22818036 taaaccaaaatttgctcaaattaacatgggggttaaaccgaaattttcttaaattacaagggggtaaacctaaatttgctcaaattacaggggataaaat 22818135  T
Q  127 ttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    || ||||||||||| || ||||||| |||||||||||||||||    
T  22818136 tttccatgaaggtctaa-aaccaaaaaatcttcaaattacaag 22818177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 169
Target Start/End: Complemental strand, 38703210 - 38703065
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacag--gggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgca 122  Q
    |||| |||| ||||||||| |||||||| |||  ||| ||| ||||||||||||||||||||  ||  |||||| | |||| |||| ||||||||| |      
T  38703210 gggggtaaaccaaaatttgttcaaattagcagaggggtaaaccgaaatttgctcaaattataagggggtaaacctagatttgctcatattacagggggtg 38703111  T
Q  123 aaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| | |||||||| ||| ||||||| |||||||||||||||||    
T  38703110 aaattttctatgaaggttcaa-aaccaaaaaatcttcaaattacaag 38703065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 39218808 - 39218731
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||||||||||||||| |||| |||||||||  |||||||||| || ||| ||| |||||||||||||||||    
T  39218808 taaaccgaaattttctcaaattatagggggcaaaatttttcatgaaggtctaa-aacaaaaaaatcttcaaattacaag 39218731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 13041577 - 13041443
Alignment:
Q  37 aaatttgctcaaattaacaggggc---aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    ||||||||||||||||||| |||    ||| |||||||| ||||||||| |  ||  |||| | | |||| |||||||||||||| | ||| ||| ||||    
T  13041577 aaatttgctcaaattaacatgggggttaaaccgaaattttctcaaattacaagggggtaaatctacatttgctcaaattacagggggtaaagttttccat 13041478  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| ||||||| |||||||||||||||||    
T  13041477 gaaggtccaa-aaccaaaaaatcttcaaattacaag 13041443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 13049654 - 13049520
Alignment:
Q  37 aaatttgctcaaattaacaggggc---aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    ||||||||||||||||||| |||    ||| |||||||| ||||||||| |  ||  |||| | | |||| |||||||||||||| | ||| ||| ||||    
T  13049654 aaatttgctcaaattaacatgggggttaaaccgaaattttctcaaattacaagggggtaaatctacatttgctcaaattacagggggtaaagttttccat 13049555  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| ||||||| |||||||||||||||||    
T  13049554 gaaggtccaa-aaccaaaaaatcttcaaattacaag 13049520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 44963182 - 44963289
Alignment:
Q  35 caaaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    ||||||||||||||||||  ||||| ||| | |||||||||||||||| |||    ||||| |||||||||||||||||||||| || ||||||  ||||    
T  44963182 caaaatttgctcaaattattaggggtaaaccaaaatttgctcaaattacaga-tagtaaactgaaattttctcaaattacagggagcgaaatttttcatg 44963280  T
Q  135 aaggtccaa 143  Q
    || ||||||    
T  44963281 aaagtccaa 44963289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 31293666 - 31293534
Alignment:
Q  37 aaatttgctcaaattaaca--ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||| ||||||||||||  |||| ||| | ||||||||||||||| ||| || | |||||||||||| ||||||||| |||| |||||||||   |||    
T  31293666 aaattttctcaaattaacaagggggtaaaccaaaatttgctcaaattgtagggggt-aaaccgaaatttcctcaaattatagggggcaaaatttttaatg 31293568  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| || ||||||| ||  |||||||||||||    
T  31293567 aaggtctaa-aaccaaaaaaatttcaaattacaag 31293534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 169
Target Start/End: Complemental strand, 32721733 - 32721589
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacag--gggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgca 122  Q
    |||| |||||| ||||||||||||||||||||  ||| ||| | |||||| ||||||||| | |||  |||||| |||||| |||||||||||||| |      
T  32721733 gggggtaaatcgaaatttgctcaaattaacaggcgggtaaaccaaaatttcctcaaattaca-aggggtaaacctaaatttgctcaaattacagggggtg 32721635  T
Q  123 aaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |  | ||||||||| ||| ||| |||||||||||||||||    
T  32721634 aaattttcattaaaggtccaa-aactaaaaaatcttcaaattacaag 32721589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 14154998 - 14154858
Alignment:
Q  30 taaatcaaaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatt 127  Q
    |||| |||||||| ||||||||||||| |||  ||| | ||||||||||| |||| |  ||  |||||| |||||| ||||||||| |||| |  |||||    
T  14154998 taaagcaaaattttctcaaattaacagaggcgtaaaccaaaatttgctcatattacaagggggtaaacctaaatttgctcaaattatagggggtgaaatt 14154899  T
Q  128 tgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |  |||||||||| || ||||||| |||||||||||||||||    
T  14154898 tttcatgaaggtctaa-aaccaaaaaatcttcaaattacaag 14154858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 23293567 - 23293494
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaatta 165  Q
    ||||||||||||||||||||||||| || |||||||||  |||||| ||| || ||||||| |||||||||||||    
T  23293567 taaaccgaaattttctcaaattacaaggggcaaaatttttcatgaaagtctaa-aaccaaaaaatcttcaaatta 23293494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 5572167 - 5572033
Alignment:
Q  37 aaatttgctcaaattaacagggg--caaatcgaaatttgctcaaattat-agaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    |||||||||||||||||||||||   ||| |||| ||| |||||||||| || ||  |||||| | |||| |||||||||||||| |  |||||| | ||    
T  5572167 aaatttgctcaaattaacaggggtttaaaccgaacttttctcaaattataaggggggtaaacctatatttgctcaaattacagggggtgaaattttctat 5572068  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| ||| ||||||| |||||||||||| ||||    
T  5572067 gaaggttcaa-aaccaaaaaatcttcaaatttcaag 5572033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 36727786 - 36727714
Alignment:
Q  93 aaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaatta 165  Q
    ||||||||||| |||||||||||||| || || ||| |||||||||||||| | | ||| |||||||||||||    
T  36727786 aaccgaaatttgctcaaattacagggggcgaagtttaccatgaaggtccaaaaccaaaaaaatcttcaaatta 36727714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 45151785 - 45151915
Alignment:
Q  37 aaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaa 136  Q
    |||||| ||||| |||| || || ||| | |||||||||||||||  || || | |||||||||||| |||||||||||||| |||||| ||  ||||||    
T  45151785 aaattttctcaagttaatagaggtaaacccaaatttgctcaaattgcagggggt-aaaccgaaatttcctcaaattacagggggcaaaaattttcatgaa 45151883  T
Q  137 ggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||| || ||||||| |||| | ||||||||||    
T  45151884 ggtctaa-aaccaaaaaatcataaaattacaag 45151915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 16896111 - 16896014
Alignment:
Q  71 ttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||||||  ||  |||||| |||||| ||||||||| |||| |  |||||| ||||||| || ||| ||||||| |||||||||||||||||    
T  16896111 ttgctcaaattataagggggtaaaccaaaatttgctcaaattagagggggtgaaattttccatgaaagttcaa-aaccaaaaaatcttcaaattacaag 16896014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 19111155 - 19111022
Alignment:
Q  37 aaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    ||||||||||||||||||| |||| |||  ||||||| |||||||||  || ||  |||||| |||||| |||||||||||||| |  ||||||  | ||    
T  19111155 aaatttgctcaaattaacagggggtaaactgaaattttctcaaattacaaggggggtaaacctaaatttgctcaaattacagggggtgaaatttttcttg 19111056  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||  ||| |||||||||||||||||    
T  19111055 aaggtccaa-aataaaaaaatcttcaaattacaag 19111022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 5572178 - 5572120
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattat-agaggtttaaaccgaaattttctcaaatta 113  Q
    |||| ||| ||||||||||||||||||  || ||||||||||||| |||||||||||||    
T  5572178 ggggtaaaccgaaatttgctcaaattaacaggggtttaaaccgaacttttctcaaatta 5572120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 36727819 - 36727766
Alignment:
Q  30 taaatcaaaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaatta 82  Q
    |||| ||||||||||||||||||||| ||||  || ||||||||||||||||||    
T  36727819 taaaccaaaatttgctcaaattaacagggggtgaaccgaaatttgctcaaatta 36727766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 6e-25; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 26399081 - 26398936
Alignment:
Q  24 gggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgca 122  Q
    ||||| |||| | |||||||||||||||||||||||  |||||||||||||||||||||| |  ||  |||||| ||||||||||||||||||||| |      
T  26399081 ggggggtaaaccgaaatttgctcaaattaacagggggtaaatcgaaatttgctcaaattacaaggggataaacctaaattttctcaaattacagggggtg 26398982  T
Q  123 aaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||  ||||||||| ||| ||||||| |||||||| ||||||||    
T  26398981 aaatttttcatgaaggttcaa-aaccaaaaaatcttcatattacaag 26398936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 27666078 - 27666211
Alignment:
Q  37 aaatttgctcaaattaacaggg-gcaaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||||||||| | ||| |||||||| ||||||||| | | ||  |||||| |||||| |||||||||||||| | ||||||| |||||    
T  27666078 aaatttgctcaaattaacagggcgtaaaccgaaatttactcaaattacaaggggagtaaacctaaatttgctcaaattacagggggtaaaattttccatg 27666177  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||||||||||||    
T  27666178 aaggtccaa-aaccaaaaaatcttcaaattacaag 27666211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 15336719 - 15336569
Alignment:
Q  24 gggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtt----taaaccgaaattttctcaaattacaggg 118  Q
    |||||||||| ||||||||||||||| |||||||||  ||| |||||||||||||||| | || ||      | ||||||||||||||||||||||||||    
T  15336719 gggggctaaaccaaaatttgctcaaactaacagggggtaaaccgaaatttgctcaaatcacaggggggggggttaaccgaaattttctcaaattacaggg 15336620  T
Q  119 tgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     || ||||||||||||||||||||| |   ||| |||||||||||||||||    
T  15336619 ggcgaaatttgccatgaaggtccaaaacaaaaaaaatcttcaaattacaag 15336569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 20158871 - 20158732
Alignment:
Q  30 taaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaattt 128  Q
    |||| |||||||||||||||||||||||||  |||||||||||| ||||||||| |  ||  |||||| ||||||||||||||||||||| |  ||||||    
T  20158871 taaaccaaaatttgctcaaattaacagggggtaaatcgaaattttctcaaattacaagggggtaaacctaaattttctcaaattacagggggtgaaattt 20158772  T
Q  129 gccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
      ||||||||||||| ||||||| |||| ||| ||||||||    
T  20158771 ttcatgaaggtccaa-aaccaaaaaatcatcatattacaag 20158732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 6284391 - 6284258
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||||||||||  ||||| |||||||||||||||| | | ||  |||||| ||||||||||||||||||||| |  ||||||  ||||    
T  6284391 aaatttgctcaaattaacagggggtaaatcaaaatttgctcaaattacaaggggggtaaacctaaattttctcaaattacagggggtgaaatttttcatg 6284292  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||| ||||||||    
T  6284291 aaggtccaa-aaccaaaaaatcttcatattacaag 6284258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 14909972 - 14909841
Alignment:
Q  37 aaatttgctcaaattaacagg-ggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||| |||||||||||||| || ||| | ||||||||||||||| ||| || | |||||||||||| |||||||||||||| |||||||||  |||||    
T  14909972 aaattttctcaaattaacaggaggtaaaccaaaatttgctcaaattgtaggggat-aaaccgaaatttcctcaaattacagggggcaaaatttttcatga 14909874  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||| || ||||||| |||||||||| ||||||    
T  14909873 aggtctaa-aaccaaataatcttcaaactacaag 14909841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 9209723 - 9209866
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattacagggtg 120  Q
    |||||| |||| | ||||||||| |||||||||||||  ||||||||||||||||||||||  || ||  |||||  ||||||||||||||||||||| |    
T  9209723 aggggggtaaaccgaaatttgctaaaattaacagggggtaaatcgaaatttgctcaaattacaaggggggtaaacataaattttctcaaattacaggggg 9209822  T
Q  121 caaaatttgccatgaaggtccaagaaccaaagaatcttcaaatta 165  Q
      ||||||  ||||||||||||| ||||||| |||||||| ||||    
T  9209823 tgaaatttttcatgaaggtccaa-aaccaaaaaatcttcatatta 9209866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 165
Target Start/End: Original strand, 26190892 - 26191021
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    ||||||||||||||||||| |||   ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| | ||||||| |||||    
T  26190892 aaatttgctcaaattaacatggggttaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggggtaaaattttccatg 26190991  T
Q  135 aaggtccaagaaccaaagaatcttcaaatta 165  Q
    ||||||||| || |||| |||||||||||||    
T  26190992 aaggtccaa-aatcaaaaaatcttcaaatta 26191021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 44961167 - 44961299
Alignment:
Q  37 aaatttgctcaaattaaca--ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    ||||||||| |||||||||  |||| ||| |||||||||||||||||| |  || |||| || |||||| |||||||||||||| |  |||||| || ||    
T  44961167 aaatttgctgaaattaacaagggggtaaaccgaaatttgctcaaattacatggggttaa-cctaaatttactcaaattacagggggtgaaattttccgtg 44961265  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||||||||||||    
T  44961266 aaggtccaa-aaccaaaaaatcttcaaattacaag 44961299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 21770941 - 21771018
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||||||||||||||| || || |||||| |||||||||||||| ||||||| |||||||||||||||||    
T  21770941 taaacctaaattttctcaaattacatggagcgaaattttccatgaaggtccaa-aaccaaaaaatcttcaaattacaag 21771018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 169
Target Start/End: Original strand, 30147218 - 30147361
Alignment:
Q  27 ggctaaatcaaaatttgctcaaattaacag-gggcaaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaa 124  Q
    ||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||| | | | ||  |||||| |||||||||||||| ||| |  || ||    
T  30147218 ggctaaaccaaaatttgctcaaattaacagagggtaaaccgaaatttgctcaaatcacagggggggtaaaccaaaattttctcaaatgacaagaggcgaa 30147317  T
Q  125 atttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||||  | ||| ||||||| ||||||||| |||||||    
T  30147318 atttgccatgaattttcaa-aaccaaaaaatcttcaatttacaag 30147361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 46528980 - 46528840
Alignment:
Q  30 taaatcaaaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatt 127  Q
    |||||| ||||||||| ||||||||||||||  |||  |||||||| |||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||    
T  46528980 taaatcgaaatttgcttaaattaacaggggcgtaaactgaaatttgttcaaattacaagggggtaaacctaaatttgctcaaattacagggggtgaaatt 46528881  T
Q  128 tgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    | | ||||||||| || ||| ||| |||||||||||||||||    
T  46528880 ttctatgaaggtctaa-aacaaaaaaatcttcaaattacaag 46528840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 21853716 - 21853640
Alignment:
Q  92 aaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||||| |||||||||||||| |||| ||||  |||||||||| || ||||||| |||||||||||||||||    
T  21853716 aaaccgaaatttcctcaaattacagggggcaacatttttcatgaaggtctaa-aaccaaaaaatcttcaaattacaag 21853640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 22387301 - 22387224
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||| ||| |||| ||||| | ||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  22387301 taaacctaaatttgctccaattgcagggggtaaaattttccatgaaggtccaa-aaccaaaaaatcttcaaattacaag 22387224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 31883610 - 31883755
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtt-taaaccgaaattttctcaaattacagggtgca 122  Q
    |||| |||||||||||||  |||||||||||||||  ||| | |||||| ||||||||| | |||   |||||  |||||| ||||||||||| || |      
T  31883610 gggggtaaatcaaaatttaatcaaattaacagggggtaaaccaaaattttctcaaattacaaaggggataaacttaaatttactcaaattacaaggggtg 31883709  T
Q  123 aaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||||||||||| ||||||| |||||| ||||||||||    
T  31883710 aaattttccatgaaggtccaa-aaccaaaaaatctttaaattacaag 31883755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 5932123 - 5932257
Alignment:
Q  37 aaatttgctcaaattaacaggggc---aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    ||||||||||||||||||| |||    ||| |||||||| ||||||||| |   |  |||||| |||||| ||||||||||| |  | ||||||| ||||    
T  5932123 aaatttgctcaaattaacatgggggttaaaccgaaattttctcaaattacaagtggataaacctaaatttgctcaaattacaagaggtaaaattttccat 5932222  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| ||||||| |||||| ||||||||||    
T  5932223 gaaggtccaa-aaccaaaaaatctttaaattacaag 5932257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 16421101 - 16421176
Alignment:
Q  93 aaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||| |||||| ||||||| ||| || | |||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  16421101 aaccaaaatttgctcaaatgacaagggggaaaatttgccatgaaggttcaa-aaccaaaaaatcttcaaattacaag 16421176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 5457242 - 5457375
Alignment:
Q  37 aaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    ||||||||| ||||||||| |||| ||||| ||||||||||||||||  || ||  |||||| ||||||||||||||||  ||| |  ||||||  |||     
T  5457242 aaatttgctaaaattaacagggggtaaatcaaaatttgctcaaattacaaggggggtaaacctaaattttctcaaattattgggggtgaaatttttcata 5457341  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| || ||||||| |||||||| ||||||||    
T  5457342 aaggtctaa-aaccaaaaaatcttcatattacaag 5457375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 23161979 - 23162089
Alignment:
Q  30 taaatcaaaatttgctcaaattaac-aggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaattt 128  Q
    |||| |||||||||||||||||||| ||||| |||  ||||||||||||||||| |  ||  |||||| |||||| ||||| |||||||| |  ||||||    
T  23161979 taaaccaaaatttgctcaaattaacaaggggtaaactgaaatttgctcaaattacaagggggtaaacctaaatttgctcaagttacagggagtgaaattt 23162078  T
Q  129 gccatgaaggt 139  Q
     || |||||||    
T  23162079 tccgtgaaggt 23162089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 16421061 - 16421097
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacagggg 59  Q
    ||||||||||| |||||||||||||||||||||||||    
T  16421061 agggggctaaaccaaaatttgctcaaattaacagggg 16421097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 7381450 - 7381384
Alignment:
Q  63 atcgaaatttgctcaaattatagaggtttaaaccgaaatttt-ctcaaattacagggtgcaaaattt 128  Q
    ||||||||||||| ||||||||||||  |||| ||||||||| || |||||||||||  ||||||||    
T  7381450 atcgaaatttgcttaaattatagaggggtaaatcgaaattttgcttaaattacaggggacaaaattt 7381384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 16474473 - 16474598
Alignment:
Q  44 ctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtcca 142  Q
    ||||||||||||||||  ||| |||||||||||||||||   ||||  ||||||||| ||| || |||||| |||| |||||| ||  ||| |||||| |    
T  16474473 ctcaaattaacagggggtaaaccgaaatttgctcaaattgcggaggggtaaaccgaattttccttaaattatagggggcaaaaattttcattaaggtcta 16474572  T
Q  143 agaaccaaagaatcttcaaattacaag 169  Q
    | ||||||| ||  |||||||||||||    
T  16474573 a-aaccaaaaaaagttcaaattacaag 16474598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 19967780 - 19967857
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||| ||||||||||| ||    |||||| |||||||||||||| || |||| |||||||||||||||||    
T  19967780 taaacctaaatttgctcaaattacaagggctgaaattttccatgaaggtccaa-aatcaaaaaatcttcaaattacaag 19967857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 143
Target Start/End: Complemental strand, 50345043 - 50344998
Alignment:
Q  98 aaattttctcaaattacagggtgcaaaatttgccatgaaggtccaa 143  Q
    ||||||||||||||||||||| |  ||||||| |||||||||||||    
T  50345043 aaattttctcaaattacagggggtgaaatttgtcatgaaggtccaa 50344998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 2270632 - 2270779
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacagggg--caaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtg 120  Q
    |||||| |||| | |||||||||||||||||||||||   ||| |||||||||||||||||| |  ||  |||||| |||||| ||||||||| |||| |    
T  2270632 aggggggtaaaccgaaatttgctcaaattaacagggggttaaaccgaaatttgctcaaattacaagggggtaaacctaaatttgctcaaattatagggag 2270731  T
Q  121 caaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
      |||||| |||||||||||||| ||||||| |||||||||||||||||    
T  2270732 tgaaattttccatgaaggtccaa-aaccaaaaaatcttcaaattacaag 2270779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 21544292 - 21544425
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||||||||||   ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||| |||||    
T  21544292 aaatttgctcaaattaacaggggggtaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggagtgaaattttccatg 21544391  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||||||||||||    
T  21544392 aaggtccaa-aaccaaaaaatcttcaaattacaag 21544425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 143
Target Start/End: Complemental strand, 11107759 - 11107638
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggg-gcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    ||||||||||| ||||||| |||||||||||||  | | ||| | |||||||||||||||| |  ||  |||||||||||||| ||||||||||||| ||    
T  11107759 agggggctaaaccaaaattcgctcaaattaacaaagagtaaaccaaaatttgctcaaattacacgggggtaaaccgaaattttatcaaattacagggggc 11107660  T
Q  122 aaaatttgccatgaaggtccaa 143  Q
     |||||||||||||||||||||    
T  11107659 gaaatttgccatgaaggtccaa 11107638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 17158334 - 17158195
Alignment:
Q  30 taaatcaaaatttgctcaaattaac-aggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaattt 128  Q
    |||| |||||||||||||||||||| ||||| ||| |||||||||||||||||| |  ||  |||||| || ||| ||||||||| |||| |  ||||||    
T  17158334 taaaccaaaatttgctcaaattaacaaggggtaaaccgaaatttgctcaaattacaaggggataaacctaagtttgctcaaattatagggagtgaaattt 17158235  T
Q  129 gccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     |||||||||| ||| ||||||| |||||||||||||||||    
T  17158234 tccatgaaggtacaa-aaccaaaaaatcttcaaattacaag 17158195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 1227838 - 1227971
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||||||||||   ||| |||||||| |||||| || |  ||  |||||| |||||| |||||||||||||| |  |||||| |||||    
T  1227838 aaatttgctcaaattaacaggggggtaaaccgaaattttctcaaaatacaagggggtaaacctaaatttgctcaaattacagggagtgaaattttccatg 1227937  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||||||||||||    
T  1227938 aaggtccaa-aaccaaaaaatcttcaaattacaag 1227971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 13729163 - 13729017
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtg 120  Q
    ||||||||||| | |||||  ||||||||||||||||   ||| | ||||||||||||||| | | ||  ||||||||||||||||||||||||| || |    
T  13729163 agggggctaaaccgaaattcactcaaattaacaggggggtaaaccaaaatttgctcaaatttttggggcataaaccgaaattttctcaaattacaagggg 13729064  T
Q  121 caaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |  ||||| ||||||||||| || ||||||| |||||||||||||||||    
T  13729063 c-gaattttccatgaaggtctaa-aaccaaaaaatcttcaaattacaag 13729017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 26475911 - 26476058
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattacagggtg 120  Q
    |||||| |||| | ||||||||| ||||||||| |||| ||||||||||||||||||||||  || ||  |||||  ||||||||||||||||||||| |    
T  26475911 aggggggtaaaccgaaatttgctaaaattaacatggggtaaatcgaaatttgctcaaattacaaggggggtaaacataaattttctcaaattacaggggg 26476010  T
Q  121 caaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
      ||||||  |||||||||| || ||||||| |||||||| ||||||||    
T  26476011 tgaaatttttcatgaaggtctaa-aaccaaaaaatcttcatattacaag 26476058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 37 - 165
Target Start/End: Original strand, 12293024 - 12293152
Alignment:
Q  37 aaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||||||  |||||  |||||| |||||||||||||||| ||||    |||||| |||||    
T  12293024 aaatttgctcaaattaacagggggtaaaccgaaatttgctcaaattacaagagg-gtaaacctaaattttctcaaattataggggatgaaattttccatg 12293122  T
Q  135 aaggtccaagaaccaaagaatcttcaaatta 165  Q
    ||||| ||| ||||||| |||||||||||||    
T  12293123 aaggttcaa-aaccaaaaaatcttcaaatta 12293152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 34414491 - 34414351
Alignment:
Q  30 taaatcaaaatttgctcaaattaacagg--ggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatt 127  Q
    |||||| |||||||||||||||||||||  || ||| | |||||| ||||||||| | |||  |||||| |||||| |||||||||||||| |  |||||    
T  34414491 taaatcgaaatttgctcaaattaacaggtgggtaaaccaaaatttcctcaaattacaaaggggtaaacctaaatttgctcaaattacagggggtgaaatt 34414392  T
Q  128 tgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    | |  ||||||||||| ||||||| ||| |||||||||||||    
T  34414391 ttcattgaaggtccaa-aaccaaaaaatattcaaattacaag 34414351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 9676434 - 9676306
Alignment:
Q  37 aaatttgctcaaattaacag-gggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||||||||||||||||| ||| |||  ||||||||||||||||| |  || ||||||| |||||| || |||||| |||| |  ||||||  |||||    
T  9676434 aaatttgctcaaattaacagagggtaaactgaaatttgctcaaattacaaggggttaaacctaaatttgctgaaattagagggggtgaaatttttcatga 9676335  T
Q  136 aggtccaagaaccaaagaatcttcaaatta 165  Q
    |||||||| ||||||| |||||||||||||    
T  9676334 aggtccaa-aaccaaaaaatcttcaaatta 9676306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 29942717 - 29942789
Alignment:
Q  96 cgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||||||||||||||| | ||||||||||||||| ||| || ||||||| |||||||||||||||||    
T  29942717 cgaaattttctcaaattacagggagtaaaatttgccatgaaagtctaa-aaccaaaaaatcttcaaattacaag 29942789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 32603698 - 32603565
Alignment:
Q  37 aaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||||||||||||| |||| ||| |||||||||||||||||| |  ||  |||||| |||||| |||||||||||||| |  ||||||  |||||    
T  32603698 aaatttgctcaaattaacaaggggtaaaccgaaatttgctcaaattagaagggggtaaacctaaatttactcaaattacagggagtgaaatttttcatga 32603599  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| | | ||| ||  |||||||||||||    
T  32603598 aggtccaaaaccaaaaaaaaattcaaattacaag 32603565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 9222554 - 9222409
Alignment:
Q  24 gggggctaaatcaaaatttgctcaaattaacaggg--gcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    ||||| |||| | |||||| |||||||||| ||||  | |||||||||||||||||||||  || || | ||||| |||||| ||||||||| ||||  |    
T  9222554 ggggggtaaaccgaaatttcctcaaattaatagggaggtaaatcgaaatttgctcaaattgcagggggt-aaaccaaaatttactcaaattataggggac 9222456  T
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||  |||||||||| || ||||||| |||||||||||||||||    
T  9222455 aaaatttttcatgaaggtctaa-aaccaaaaaatcttcaaattacaag 9222409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 7321974 - 7321841
Alignment:
Q  37 aaatttgctcaaattaacagg--ggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    ||||||||||||||||||| |  || ||| | ||||||||| |||||| |  ||  |||||| |||||| |||||||||||||| |  |||||| || ||    
T  7321974 aaatttgctcaaattaacatgaaggtaaaccaaaatttgcttaaattacaagggggtaaacctaaatttgctcaaattacagggagtgaaattttccgtg 7321875  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||||||||||||    
T  7321874 aaggtccaa-aaccaaaaaatcttcaaattacaag 7321841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 33708766 - 33708634
Alignment:
Q  37 aaatttgctcaaattaacaggggcaaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||||  || ||  |||||| |||||||||||| ||| |||  |  |||||| ||||||    
T  33708766 aaatttgctcaaattaacatgggtaaattgaaatttgctcaaattacaaggggggtaaacctaaattttctcaagttataggaggtgaaattttccatga 33708667  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| ||||||| | |||||  ||||||||    
T  33708666 aggtccaa-aaccaaaaactcttcgtattacaag 33708634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 31174188 - 31174052
Alignment:
Q  30 taaatcaaaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttg 129  Q
    |||||| |||||| |||||||||||||| | ||| | |||||||||||||||  |  ||   |||||||||||| ||||||||| |||| |||||| ||     
T  31174188 taaatcgaaattttctcaaattaacaggagtaaaccaaaatttgctcaaattgcatgggg--aaaccgaaatttcctcaaattatagggggcaaaaattt 31174091  T
Q  130 ccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     |||||||||| || || |||| |||||||||||||||||    
T  31174090 tcatgaaggtctaa-aatcaaaaaatcttcaaattacaag 31174052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 10546044 - 10545911
Alignment:
Q  37 aaatttgctcaaatt--aacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||  | | |||| ||| | |||||||||||||||  |  ||  ||||||||||||| ||||||||| |||| |||||||||  ||||    
T  10546044 aaatttgctcaaattgcagcgggggtaaacccaaatttgctcaaattgcaagggggtaaaccgaaatttcctcaaattatagggggcaaaatttttcatg 10545945  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| || ||||||| |||||| ||||||||||    
T  10545944 aaggtctaa-aaccaaaaaatcttaaaattacaag 10545911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 22362780 - 22362913
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||||| ||||   ||||||||||||| |||||||| |   |  |||||| |||||| |||||||||||||| |  |||||| | |||    
T  22362780 aaatttgctcaaattaacgggggggtaaatcgaaatttgatcaaattacaagcgggtaaacctaaatttgctcaaattacagggggtgaaattttctatg 22362879  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||| ||| ||||||| ||| |||||||||||||    
T  22362880 aaggt-caaaaaccaaaaaatattcaaattacaag 22362913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 22495914 - 22495781
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    ||||||||||||||||| |||||   ||| | |||||| ||||||||| |  ||  |||||| |||||| || ||||||||||| |  |||||| | |||    
T  22495914 aaatttgctcaaattaataggggggtaaaccaaaatttactcaaattacaagggggtaaacctaaatttgcttaaattacagggagtgaaattttctatg 22495815  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||||||||||||    
T  22495814 aaggtccaa-aaccaaaaaatcttcaaattacaag 22495781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 2270614 - 2270695
Alignment:
Q  37 aaatttgctcaaattaaca--ggggcaaatcgaaatttgctcaaatt-atagaggtttaaaccgaaattttctcaaattaca 115  Q
    |||||||||||||||||||  |||| ||| ||||||||||||||||| | || || |||||||||||||| |||||||||||    
T  2270614 aaatttgctcaaattaacaggggggtaaaccgaaatttgctcaaattaacagggggttaaaccgaaatttgctcaaattaca 2270695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 15881261 - 15881185
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaa 168  Q
    |||||| ||||||||||||||||||||| |  ||||||  ||||||||||||| ||||||| |||||||| |||||||    
T  15881261 taaacctaaattttctcaaattacagggggtgaaatttttcatgaaggtccaa-aaccaaaaaatcttcatattacaa 15881185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 115
Target Start/End: Original strand, 20504239 - 20504331
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattaca 115  Q
    |||| |||||||||||||||||||||||||| |||| ||  ||||||||||||||||||  || ||  |||||| |||||| |||||||||||    
T  20504239 gggggtaaatcaaaatttgctcaaattaacagggggtaacccgaaatttgctcaaattacaaggggggtaaacctaaatttgctcaaattaca 20504331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 25070591 - 25070668
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||||| || |||||| |||| |||||||||  ||||||||||||| ||||||| |||| | ||||||||||    
T  25070591 taaaccgaaatttgcttaaattaaagggggcaaaatttatcatgaaggtccaa-aaccaaaaaatccttaaattacaag 25070668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 9234998 - 9235137
Alignment:
Q  30 taaatcaaaatttgctcaaattaacaggggcaaatc-gaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaaatt 127  Q
    |||||| |||||||||||||||||||||||  || | ||||||| | ||||||| | | ||  |||||  ||||||  ||||||||||||| |  |||||    
T  9234998 taaatcgaaatttgctcaaattaacaggggataaactgaaattttc-caaattacaaggggggtaaacataaatttgttcaaattacagggggtgaaatt 9235096  T
Q  128 tgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    | |||||| ||||||| ||||||| |||||||||||||||||    
T  9235097 ttccatgatggtccaa-aaccaaaaaatcttcaaattacaag 9235137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 34077559 - 34077427
Alignment:
Q  37 aaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||||||||||||| |||| ||| |||||||||||||||||| |   |   ||||| |||||| ||||| ||| |||| |  ||||||  |||||    
T  34077559 aaatttgctcaaattaacagggggtaaaccgaaatttgctcaaattacaagtggacaaacctaaatttgctcaatttaaagggggtgaaatttttcatga 34077460  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| ||||| | |||||| ||||||||||    
T  34077459 aggtccaa-aaccataaaatctttaaattacaag 34077427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 5460016 - 5459945
Alignment:
Q  67 aaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggt 139  Q
    |||||||||||||||| | |||  ||||| ||||||||||||||||| |||  ||||||||| ||||||||||    
T  5460016 aaatttgctcaaattaca-aggggtaaactgaaattttctcaaattataggcggcaaaattttccatgaaggt 5459945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 18592165 - 18592301
Alignment:
Q  30 taaatcaaaatttgctcaaattaacag-gggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaattt 128  Q
    |||| |||||||||||||||||||||| ||| |||  |||||||||||||| ||||  ||  |||||  |||||| || ||||||  ||| |  ||||||    
T  18592165 taaaccaaaatttgctcaaattaacagagggtaaactgaaatttgctcaaaatataagggggtaaacttaaatttgctgaaattaacgggggtgaaattt 18592264  T
Q  129 gccatgaaggtccaagaaccaaagaatcttcaaatta 165  Q
     |||||||||||||| |   ||| |||||||||||||    
T  18592265 tccatgaaggtccaaaacaaaaaaaatcttcaaatta 18592301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 21556132 - 21556080
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaa 143  Q
    ||||| |||||||||||||||||||||| ||  ||||| ||||||||||||||    
T  21556132 taaactgaaattttctcaaattacagggggcgtaattttccatgaaggtccaa 21556080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 32216963 - 32216876
Alignment:
Q  30 taaatcaaaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacag 116  Q
    |||||| ||||||||||||||||||| |||| ||| | |||||||||||||||| |  ||  |||| | |||||| ||||||||||||    
T  32216963 taaatcgaaatttgctcaaattaacagggggtaaaccaaaatttgctcaaattacaagggggtaaatctaaatttgctcaaattacag 32216876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 359845 - 359803
Alignment:
Q  98 aaattttctcaaattacagggtgcaaaatttgccatgaaggtc 140  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||    
T  359845 aaattttctcaaattacagggggcaaaatttaccatgatggtc 359803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 10343701 - 10343778
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| ||||||  ||||| ||||||| |  |||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  10343701 taaacctaaatttgatcaaactacagggagtgaaattttccacgaaggtccaa-aaccaaaaaatcttcaaattacaag 10343778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 16119910 - 16119955
Alignment:
Q  123 aaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||||    
T  16119910 aaattttccatgaaggtccaa-aaccaaaaaatcttcaaattacaag 16119955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 18591262 - 18591201
Alignment:
Q  106 tcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaa 168  Q
    ||||||||||||| |  |||||| || ||||||||||| ||||||| ||||||||||||||||    
T  18591262 tcaaattacagggggtgaaattttccgtgaaggtccaa-aaccaaaaaatcttcaaattacaa 18591201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 686505 - 686373
Alignment:
Q  37 aaatttgctcaaattaacagg-ggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||||||||||||||| || |||  ||||||| ||||||||| |  ||  |||||| |||||| |||||| || |||| |  ||||||  |||||    
T  686505 aaatttgctcaaattaacaggtggtaaactgaaattttctcaaattacaagggggtaaacctaaatttgctcaaactaaagggggtgaaatttttcatga 686406  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| ||||||| ||   ||||||||||||    
T  686405 aggtccaa-aaccaaaaaaaaatcaaattacaag 686373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 11362928 - 11362856
Alignment:
Q  66 gaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggt 139  Q
    |||||||||||| |||| || || | |||| |||||||||| |||||||||||||  |||||| ||||||||||    
T  11362928 gaaatttgctcatattacagggggt-aaactgaaattttcttaaattacagggtgtgaaatttaccatgaaggt 11362856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 13462804 - 13462879
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaa 168  Q
    |||||| |||||| ||||||||||| ||  ||||||||| |||||||||| || ||||||| |||||| |||||||||    
T  13462804 taaaccaaaatttgctcaaattacaagggacaaaatttgtcatgaaggtctaa-aaccaaa-aatctttaaattacaa 13462879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 16659676 - 16659593
Alignment:
Q  37 aaatttgctcaaattaaca--ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacaggg 118  Q
    |||||||||||||||||||  |||| ||| ||||||||  |||||||| |  ||  |||||| |||||| ||||||||||||||    
T  16659676 aaatttgctcaaattaacaagggggtaaaccgaaattttttcaaattacaagggggtaaacctaaatttgctcaaattacaggg 16659593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 21544281 - 21544341
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaatt-atagaggtttaaaccgaaattttctcaaattaca 115  Q
    |||| ||| ||||||||||||||||| | || ||  |||||||||||||||||||||||||    
T  21544281 ggggtaaaccgaaatttgctcaaattaacaggggggtaaaccgaaattttctcaaattaca 21544341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 32216937 - 32216873
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagagg 88  Q
    |||| |||| ||||||||||||||||||  |||||  ||||| |||||||||||||||| |||||    
T  32216937 gggggtaaaccaaaatttgctcaaattacaagggggtaaatctaaatttgctcaaattacagagg 32216873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 9e-24; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 13558706 - 13558836
Alignment:
Q  37 aaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaa 136  Q
    ||||||||||||||||   |||| ||| | |||||||||||||||| || || | ||||| |||||| |||||||||||||| | ||||||| |||||||    
T  13558706 aaatttgctcaaattacagggggtaaacctaaatttgctcaaattacagggggt-aaacctaaatttgctcaaattacagggggtaaaattttccatgaa 13558804  T
Q  137 ggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||| ||||||| |||||||||||||||||    
T  13558805 ggtccaa-aaccaaaaaatcttcaaattacaag 13558836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 11830337 - 11830470
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||||||||||   ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||| |||||    
T  11830337 aaatttgctcaaattaacaggggggtaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggagtgaaattttccatg 11830436  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||||||||||||    
T  11830437 aaggtccaa-aaccaaaaaatcttcaaattacaag 11830470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 12478735 - 12478868
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||||||||||   ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||| |||||    
T  12478735 aaatttgctcaaattaacaggggggtaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggagtgaaattttccatg 12478834  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||||||||||||    
T  12478835 aaggtccaa-aaccaaaaaatcttcaaattacaag 12478868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 5566710 - 5566563
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacag--gggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtg 120  Q
    ||||||||||||| ||||| |||||||||||| |  ||| ||| | |||||| |||||||| | | ||  |||| |||||||||||||||||||| || |    
T  5566710 agggggctaaatcgaaattcgctcaaattaactgcggggtaaaccaaaattttctcaaatttttggggcataaatcgaaattttctcaaattacaagggg 5566611  T
Q  121 caaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    | |||||| |||||||||||||| ||||||| ||| |||||||||||||    
T  5566610 cgaaattttccatgaaggtccaa-aaccaaaaaatattcaaattacaag 5566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 5642870 - 5643002
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| |  ||  |||||| |||||||||||||||||| || |  ||||||  |||||    
T  5642870 aaatttgctcaaattaacagggggtaaatcgaaatttgctcaaattacaagggggtaaacctaaattttctcaaattacaaggggtgaaatttttcatga 5642969  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| |||||||  ||||||| ||||||||    
T  5642970 aggtccaa-aaccaaaatatcttcatattacaag 5643002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 5644811 - 5644943
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| |  ||  |||||| |||||||||||||||||| || |  ||||||  |||||    
T  5644811 aaatttgctcaaattaacagggggtaaatcgaaatttgctcaaattacaagggggtaaacctaaattttctcaaattacaaggggtgaaatttttcatga 5644910  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| |||||||  ||||||| ||||||||    
T  5644911 aggtccaa-aaccaaaatatcttcatattacaag 5644943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 169
Target Start/End: Original strand, 13572688 - 13572835
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtg 120  Q
    ||||||||||| |||||||  ||||||||||||||||   ||| | ||||||||||||||| |   ||  ||||| ||||||||||||||||||| || |    
T  13572688 agggggctaaaccaaaattcactcaaattaacaggggggtaaaccaaaatttgctcaaattttttgggcataaactgaaattttctcaaattacaagggg 13572787  T
Q  121 caaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    | |||||| ||||||||||| || ||||||| |||||||||||||||||    
T  13572788 cgaaattttccatgaaggtctaa-aaccaaaaaatcttcaaattacaag 13572835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 31974885 - 31974738
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtg 120  Q
    |||||| |||| | |||||||||||||||||||||||   ||| |||||||||||||||||| |  ||  |||||| |||||| ||||||||| |||| |    
T  31974885 aggggggtaaaccgaaatttgctcaaattaacagggggttaaaccgaaatttgctcaaattacaagggggtaaacctaaatttgctcaaattatagggag 31974786  T
Q  121 caaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
      |||||| |||||||||||||| ||||||| |||||| ||||||||||    
T  31974785 tgaaattttccatgaaggtccaa-aaccaaaaaatctttaaattacaag 31974738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 169
Target Start/End: Complemental strand, 9305632 - 9305487
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgca 122  Q
    |||| |||||| |||||||||||||||||  ||||  ||| |||||||| ||||||||| | | ||  |||||| ||||||||||||||||||||| |      
T  9305632 gggggtaaatcgaaatttgctcaaattaattgggggtaaaccgaaatttactcaaattacaaggggggtaaacctaaattttctcaaattacagggggtg 9305533  T
Q  123 aaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||||||||||| ||||||| |||| ||||||||||||    
T  9305532 aaattttccatgaaggtccaa-aaccaaaaaatcatcaaattacaag 9305487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 38711835 - 38711703
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattat-agaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||| || ||  |||||| ||||||||||||||||||||| |  ||||||   |||    
T  38711835 aaatttgctaaaattaacagggggtaaatcgaaatttgctcaaattataaggggggtaaacctaaattttctcaaattacagggggtgaaattt-ttatg 38711737  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||| ||||||||    
T  38711736 aaggtccaa-aaccaaaaaatcttcatattacaag 38711703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 41509595 - 41509460
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattata--gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgcca 132  Q
    ||||||||||||||||||| |||   ||| |||||||| ||||||||| |  | ||  |||||| |||||| |||||||||||||| | ||||||| |||    
T  41509595 aaatttgctcaaattaacatggggttaaaccgaaattttctcaaattacaagggggggtaaacctaaatttgctcaaattacagggggtaaaattttcca 41509496  T
Q  133 tgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  41509495 tgaaggtccaa-aaccaaaaaatcttcaaattacaag 41509460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 25653917 - 25653785
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||||||| |||||||||  ||| | |||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| || |||||| ||||||    
T  25653917 aaatttgctcaaaataacagggggtaaaccaaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggagcgaaattttccatga 25653818  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| || |||| |||||||||||||||||    
T  25653817 aggtccaa-aatcaaaaaatcttcaaattacaag 25653785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 161
Target Start/End: Complemental strand, 38703811 - 38703688
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||||||||||||||||||||  |||||||||||||||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||| ||||||    
T  38703811 aaatttgctcaaattaacagggggtaaatcgaaatttgctcaaattaaaagggggtaaacccaaatttgctcaaattacaggg-gtgaaattttccatga 38703713  T
Q  136 aggtccaagaaccaaagaatcttcaa 161  Q
    ||||| || ||||||| |||||||||    
T  38703712 aggtctaa-aaccaaaaaatcttcaa 38703688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 169
Target Start/End: Complemental strand, 32684745 - 32684642
Alignment:
Q  65 cgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaatt 164  Q
    |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| | ||||||| |||||||||||||| ||||||| ||||||||||||    
T  32684745 cgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggggtaaaattttccatgaaggtccaa-aaccaaaaaatcttcaaatt 32684647  T
Q  165 acaag 169  Q
    |||||    
T  32684646 acaag 32684642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 169
Target Start/End: Original strand, 34227476 - 34227622
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacag--gggcaaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    |||| |||| ||||||||||||||||||||||  ||| ||| ||||||||||||||||||  || ||  |||||| |||||| |||||||||||||| |     
T  34227476 gggggtaaaccaaaatttgctcaaattaacaggagggtaaaccgaaatttgctcaaattacaaggggggtaaacctaaatttgctcaaattacagggagt 34227575  T
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     ||||||    ||||||||||| ||||||| |||||||||||||||||    
T  34227576 gaaattttttctgaaggtccaa-aaccaaaaaatcttcaaattacaag 34227622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 27637295 - 27637149
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgc 121  Q
    ||||||||||| |||||||  ||| ||||||||||||  ||| | |||||| |||||||| | | ||  ||||||||||||||||||||||||| || ||    
T  27637295 agggggctaaaccaaaattctctcgaattaacagggggtaaaccaaaattttctcaaatttttggggcataaaccgaaattttctcaaattacaaggggc 27637196  T
Q  122 aaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     |||||| | |||||||||||| ||||||| ||| || ||||||||||    
T  27637195 gaaattttcgatgaaggtccaa-aaccaaaaaatattaaaattacaag 27637149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 8626668 - 8626807
Alignment:
Q  30 taaatcaaaatttgctcaaa--ttaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatt 127  Q
    |||| |||||||||||||||  ||||  | || ||| |||||||||||||||||| |  ||  |||||| ||||||||||||||||||||| || |||||    
T  8626668 taaaccaaaatttgctcaaaaattaatggaggtaaaccgaaatttgctcaaattacaaggggataaacctaaattttctcaaattacagggagcgaaatt 8626767  T
Q  128 tgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    | |||||||| ||||| ||||||| ||| |||||||||||||    
T  8626768 ttccatgaagatccaa-aaccaaaaaat-ttcaaattacaag 8626807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 56 - 165
Target Start/End: Complemental strand, 12936360 - 12936251
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaa 154  Q
    |||| |||||||||||| ||||||||| ||| ||  ||||||||||||| |||||||||||||| |||||||||   ||||||||| || ||||||| ||    
T  12936360 ggggtaaatcgaaattttctcaaattaataggggggtaaaccgaaatttgctcaaattacagggggcaaaatttttgatgaaggtctaa-aaccaaaaaa 12936262  T
Q  155 tcttcaaatta 165  Q
    |||||||||||    
T  12936261 tcttcaaatta 12936251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 169
Target Start/End: Complemental strand, 34845470 - 34845364
Alignment:
Q  61 aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttca 160  Q
    |||||||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||| |||||||||||||| ||||||| ||||||||    
T  34845470 aaatcgaaattt-ctcaaattacaagggggtaaacctaaatttgctcaaattacagggggtgaaattttccatgaaggtccaa-aaccaaaaaatcttca 34845373  T
Q  161 aattacaag 169  Q
    |||||||||    
T  34845372 aattacaag 34845364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 35839506 - 35839648
Alignment:
Q  24 gggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgca 122  Q
    ||||| |||||| |||||||||||||||||||||||  ||| |||   |||||||||||| |  ||  |||||| | |||| |||||||||||||| |      
T  35839506 ggggggtaaatcgaaatttgctcaaattaacagggggtaaaccga---ttgctcaaattacaagggggtaaacctatatttgctcaaattacagggggtg 35839602  T
Q  123 aaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||| |||||||||||||| ||||||| |||||||||||| ||||    
T  35839603 aaattttccatgaaggtccaa-aaccaaaaaatcttcaaatttcaag 35839648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 35990771 - 35990656
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaat 155  Q
    |||| ||| ||||||||||||||||||    ||  ||||||||||||||||||||||||| || |  |||||| |||||||||||||| ||||||| |||    
T  35990771 ggggtaaaccgaaatttgctcaaattaacagggggtaaaccgaaattttctcaaattacaaggagtgaaattttccatgaaggtccaa-aaccaaaaaat 35990673  T
Q  156 c-ttcaaattacaagca 171  Q
    | |||||||||||||||    
T  35990672 ctttcaaattacaagca 35990656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 143
Target Start/End: Complemental strand, 15568917 - 15568810
Alignment:
Q  37 aaatttgctcaaattaacaggggcaaatcgaaatttg-ctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||| |||||||| ||||||  || | ||||||  |||||||||||| ||   |||| |||||||| ||||||||||||| ||||||||||||||||    
T  15568917 aaatttggtcaaattatcagggggtaaaccaaatttttctcaaattataggggggaaaactgaaattttttcaaattacagggggcaaaatttgccatga 15568818  T
Q  136 aggtccaa 143  Q
    ||||||||    
T  15568817 aggtccaa 15568810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 10761592 - 10761716
Alignment:
Q  44 ctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtcca 142  Q
    ||||||||||||||||  ||| |||||||||||||||||| |  ||  |||||||||||||  ||||||||||||| |  ||||||  ||||||||||||    
T  10761592 ctcaaattaacagggggtaaaccgaaatttgctcaaattacaacggaataaaccgaaatttggtcaaattacagggagtgaaattt-tcatgaaggtcca 10761690  T
Q  143 agaaccaaagaatcttcaaattacaag 169  Q
    | || |||| |||||||||||||||||    
T  10761691 a-aatcaaaaaatcttcaaattacaag 10761716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 29212032 - 29212163
Alignment:
Q  37 aaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaa 136  Q
    |||||||||||||||| || ||   ||||||||||||||||||||| || ||  |||||||||||||    |  |||||||| || ||||||| |||||     
T  29212032 aaatttgctcaaattagcaaggagtaatcgaaatttgctcaaattacaggggggtaaaccgaaatttgaagattttacagggggcgaaatttgtcatgag 29212131  T
Q  137 ggtccaagaaccaaagaatcttcaaattacaag 169  Q
    | ||||| ||||||| |||||||||||||||||    
T  29212132 gatccaa-aaccaaaaaatcttcaaattacaag 29212163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 15738354 - 15738236
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaa 123  Q
    |||| |||||| ||||||||||||||||  |||||  ||| | |||||||||||||| ||||||   ||||| ||| ||||||||||||| || ||||||    
T  15738354 gggggtaaatcgaaatttgctcaaattattagggggtaaaccaaaatttgctcaaatgatagagaagtaaactgaa-ttttctcaaattatagagtgcaa 15738256  T
Q  124 aatttgccatgaaggtccaa 143  Q
    ||||| |||||||| |||||    
T  15738255 aattttccatgaagatccaa 15738236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 31974903 - 31974822
Alignment:
Q  37 aaatttgctcaaattaaca--ggggcaaatcgaaatttgctcaaatt-atagaggtttaaaccgaaattttctcaaattaca 115  Q
    |||||||||||||||||||  |||| ||| ||||||||||||||||| | || || |||||||||||||| |||||||||||    
T  31974903 aaatttgctcaaattaacaggggggtaaaccgaaatttgctcaaattaacagggggttaaaccgaaatttgctcaaattaca 31974822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 23389168 - 23389311
Alignment:
Q  24 gggggctaaatcaaaatttgctcaaattaacag--gggcaaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattacagggtg 120  Q
    ||||| |||| | ||||||||||||||||||||  ||| |||  ||||||| |||||||||  || ||  |||||| |||||| |||||||||||| | |    
T  23389168 ggggggtaaaccgaaatttgctcaaattaacaggagggtaaactgaaattttctcaaattacaaggggggtaaacctaaatttgctcaaattacagcggg 23389267  T
Q  121 caaaatttgccatgaaggtccaagaaccaaagaatcttcaaatta 165  Q
      ||||||  ||||||||||||| ||||||| |||||||||||||    
T  23389268 tgaaatttttcatgaaggtccaa-aaccaaaaaatcttcaaatta 23389311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 30221925 - 30222065
Alignment:
Q  30 taaatcaaaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaa-ccgaaattttctcaaattacagggtgcaaaatt 127  Q
    |||||| |||||| ||||||||||||||||  ||| | |||||||||||||||  |  ||  |||| ||||||||| ||||||||| ||||  |||||||    
T  30221925 taaatcgaaattttctcaaattaacagggggtaaaccaaaatttgctcaaattgcaatggggtaaaaccgaaatttcctcaaattataggggacaaaatt 30222024  T
Q  128 tgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |  |||||||| || | ||||||| |||||||||||||||||    
T  30222025 tttcatgaagg-cctaaaaccaaaaaatcttcaaattacaag 30222065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 2873610 - 2873743
Alignment:
Q  37 aaatttgctcaaattaacaggggcaaatc--gaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    ||||||||||||||||||||||| |||    ||||||| ||||||||| | | ||  |||||| |||||| ||||||||||||||   |||||||  | |    
T  2873610 aaatttgctcaaattaacagggggaaaaactgaaattttctcaaattacaaggggggtaaacctaaatttactcaaattacagggat-aaaatttttctt 2873708  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| ||||||| |||||||||||||||||    
T  2873709 gaaggtccaa-aaccaaaaaatcttcaaattacaag 2873743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 9662349 - 9662274
Alignment:
Q  93 aaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||| ||||||||||| ||  | ||||||  ||||||||||||| ||||||| |||||||||||||||||    
T  9662349 aaccgaaatttgctcaaattacaaggaacgaaatttttcatgaaggtccaa-aaccaaaaaatcttcaaattacaag 9662274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 15935600 - 15935466
Alignment:
Q  37 aaatttgctcaaattaacaggggca--aatcgaaatttgctcaaattata-gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    ||||||||||||||||||| ||| |  || ||||||||||| |||||| | | ||  ||||||||| ||| ||||||||||||||    |||||| | ||    
T  15935600 aaatttgctcaaattaacaaggggataaaccgaaatttgctaaaattacaagtggggtaaaccgaagtttgctcaaattacaggggatgaaattttctat 15935501  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| ||||||| ||||||||||| |||||    
T  15935500 gaaggtccaa-aaccaaaaaatcttcaaatgacaag 15935466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 36637154 - 36637288
Alignment:
Q  37 aaatttgctcaaattaaca--ggggcaaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccat 133  Q
    |||||||||||||||||||  |||| || |||||||||||||||||||  || ||  |||||| |||||||||||||||| | ||    ||||||  |||    
T  36637154 aaatttgctcaaattaacaagggggtaagtcgaaatttgctcaaattacaagggggataaacctaaattttctcaaattataagggatgaaatttttcat 36637253  T
Q  134 gaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||| || |||| |||||||| ||||||||    
T  36637254 gaaggtccaa-aatcaaaaaatcttcatattacaag 36637288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 297770 - 297848
Alignment:
Q  37 aaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattataga-ggtttaaaccgaaattttctcaaattaca 115  Q
    ||||||||||||||||| ||||| | | |||||||||||||||||| ||| ||| ||||| ||||||| |||||||||||    
T  297770 aaatttgctcaaattaagaggggtataccgaaatttgctcaaatta-agagggtgtaaactgaaatttgctcaaattaca 297848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 18029798 - 18029875
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||||||| ||||||||| ||||  ||||||||  |||||||||| || ||||||| |||||||| ||||||||    
T  18029798 taaaccgaaatttcctcaaattataggggacaaaatttttcatgaaggtctaa-aaccaaaaaatcttcatattacaag 18029875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 30872608 - 30872476
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    |||||| || |||||||||||||  ||| |||||||||||||||||  |  ||  |||||| || |||||||||||||||||| |||||||||  || ||    
T  30872608 aaattttctaaaattaacagggggtaaaccgaaatttgctcaaattgcaagggggtaaaccaaatttttctcaaattacagggagcaaaattttacaaga 30872509  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||| || ||  ||  |||||||||||||||||    
T  30872508 aggtctaa-aataaagaaatcttcaaattacaag 30872476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 13558663 - 13558756
Alignment:
Q  24 gggggctaaatcaaaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacaggg 118  Q
    ||||| |||| | |||||| |||||||||  ||||| ||| | |||||||||||||||| || ||  |||||| |||||| ||||||||||||||    
T  13558663 gggggttaaacctaaattttctcaaattacaaggggtaaacctaaatttgctcaaattacag-ggggtaaacctaaatttgctcaaattacaggg 13558756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 24768688 - 24768801
Alignment:
Q  55 aggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaa 154  Q
    ||||| ||| |||||||||||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||| || | ||||||||| |||  || ||    
T  24768688 aggggtaaaccgaaatttgctcaaattacaagggggtaaacctaaatttgctcaaattacagggcgtgaaattttccgtaaaggtccaa-aacacaaaaa 24768786  T
Q  155 tcttcaaattacaag 169  Q
     ||||||||||||||    
T  24768787 acttcaaattacaag 24768801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 8442100 - 8442027
Alignment:
Q  66 gaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggt 139  Q
    |||||||| |||||||  || ||  ||||||||||||| ||||||||| |||| |||||||||  |||||||||    
T  8442100 gaaatttgttcaaattgcaggggggtaaaccgaaatttcctcaaattatagggggcaaaatttttcatgaaggt 8442027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 29346168 - 29346276
Alignment:
Q  37 aaatttgctcaaattaaca--ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||| |||||||||| |  |||| |||||||||||||||||||||| |  ||  |||||| | ||||  |||||||||||||    |||||| |||||    
T  29346168 aaattttctcaaattaaaaagggggtaaatcgaaatttgctcaaattagaagggggtaaacctatatttgttcaaattacaggggttgaaattttccatg 29346267  T
Q  135 aaggtccaa 143  Q
    |||||||||    
T  29346268 aaggtccaa 29346276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 32393498 - 32393574
Alignment:
Q  92 aaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||| |||||| |||||||||||| | |  ||||||  ||||||| ||||| ||||||| |||||||||||||||||    
T  32393498 aaacctaaatttgctcaaattacagtgcgtgaaatttttcatgaagatccaa-aaccaaaaaatcttcaaattacaag 32393574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 11830326 - 11830386
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaatt-atagaggtttaaaccgaaattttctcaaattaca 115  Q
    |||| ||| ||||||||||||||||| | || ||  |||||||||||||||||||||||||    
T  11830326 ggggtaaaccgaaatttgctcaaattaacaggggggtaaaccgaaattttctcaaattaca 11830386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 12478724 - 12478784
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaatt-atagaggtttaaaccgaaattttctcaaattaca 115  Q
    |||| ||| ||||||||||||||||| | || ||  |||||||||||||||||||||||||    
T  12478724 ggggtaaaccgaaatttgctcaaattaacaggggggtaaaccgaaattttctcaaattaca 12478784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 41509606 - 41509546
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaattat-agaggtttaaaccgaaattttctcaaattaca 115  Q
    |||| ||| ||||||||||||||||||  |  || ||||||||||||||||||||||||||    
T  41509606 ggggtaaaccgaaatttgctcaaattaacatggggttaaaccgaaattttctcaaattaca 41509546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 63245 - 63112
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatg 134  Q
    |||||||||||||||||||||||   ||| |||||||| ||||||||| |  ||  |||||| |||||| |||||||||||||| |  |||||| |||||    
T  63245 aaatttgctcaaattaacaggggggtaaaccgaaattttctcaaattacaagggggtaaacctaaatttgctcaaattacagggagtgaaattttccatg 63146  T
Q  135 aaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||||| ||||||| |||||||||||||||||    
T  63145 aaggtccaa-aaccaaaaaatcttcaaattacaag 63112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 63256 - 63196
Alignment:
Q  56 ggggcaaatcgaaatttgctcaaatt-atagaggtttaaaccgaaattttctcaaattaca 115  Q
    |||| ||| ||||||||||||||||| | || ||  |||||||||||||||||||||||||    
T  63256 ggggtaaaccgaaatttgctcaaattaacaggggggtaaaccgaaattttctcaaattaca 63196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0430 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 12697 - 12565
Alignment:
Q  37 aaatttgctcaaattaacaggggc-aaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatga 135  Q
    ||||||||| |||||||||||||  ||| |||||||||||||||||| |  ||  |||||| |||||| |||||||||||||| || ||||||  |||||    
T  12697 aaatttgcttaaattaacagggggtaaaccgaaatttgctcaaattacaagggggtaaacctaaatttgctcaaattacagggagcgaaatttttcatga 12598  T
Q  136 aggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||| |||||||  ||||| ||||||||||    
T  12597 aggtccaa-aaccaaaatatctttaaattacaag 12565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 6879 - 7017
Alignment:
Q  30 taaatcaaaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaattt 128  Q
    |||| ||||||| ||||||||||||| |||| ||| ||||||||| |||||||| |  ||  |||||||||||||  |||||||||| || |  ||||||    
T  6879 taaaccaaaattcgctcaaattaacaaggggtaaaccgaaatttgttcaaattacaatgggataaaccgaaatttggtcaaattacaaggagtgaaattt 6978  T
Q  129 gccatgaaggtccaagaaccaaagaatcttcaaattacaa 168  Q
     |||||||||||||| ||||||| ||| ||||||||||||    
T  6979 tccatgaaggtccaa-aaccaaaaaattttcaaattacaa 7017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1462 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold1462
Description:

Target: scaffold1462; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 297 - 374
Alignment:
Q  91 taaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||| ||||||||||||||||||| || |  ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  297 taaactgaaattttctcaaattacaaggggtgaaatttgccatgaaggtccaa-aaccaaaaaatcttcaaattacaag 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 169
Target Start/End: Original strand, 12637 - 12762
Alignment:
Q  45 tcaaattaacaggggc-aaatcgaaatttgctcaaattataga-ggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtcca 142  Q
    |||||||||||||||  ||| ||||||||||| |||||| | | ||| |||||| |||||| |||||||||||||| |  |||||| || ||||||||||    
T  12637 tcaaattaacagggggtaaaccgaaatttgctaaaattacaaaaggtgtaaacctaaatttgctcaaattacagggggtgaaattttccgtgaaggtcca 12736  T
Q  143 agaaccaaagaatcttcaaattacaag 169  Q
    | ||||||| |||||||||||||||||    
T  12737 a-aaccaaaaaatcttcaaattacaag 12762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 432607 - 432476
Alignment:
Q  37 aaatttgctcaaattaacaggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaa 136  Q
    ||||||||| |||||||  |||  |||||||||||||||||||||| |   |  |||||  |||||| ||||||||||| || |  |||||| |||||||    
T  432607 aaatttgctaaaattaatggggataaatcgaaatttgctcaaattacaattgggtaaacataaatttgctcaaattacaaggggtgaaattttccatgaa 432508  T
Q  137 ggtccaagaaccaaagaatcttcaaattacaag 169  Q
    ||||||| ||||||| |||||||||||||||||    
T  432507 ggtccaa-aaccaaaaaatcttcaaattacaag 432476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 169
Target Start/End: Original strand, 332225 - 332359
Alignment:
Q  37 aaatttgctcaaattaacaggggc--aaatcgaaatttgctcaaattata---gaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgcc 131  Q
    |||||||||||||||||||||||   |||  ||||||| ||||||||| |   |||||  |||||  |||||||||||||||||||| |  ||||||  |    
T  332225 aaatttgctcaaattaacaggggggtaaactgaaattttctcaaattacaagggaggt--aaaccttaattttctcaaattacagggggtgaaatttttc 332322  T
Q  132 atgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
     ||||||||||| ||||||| |||||||||||||||||    
T  332323 ttgaaggtccaa-aaccaaaaaatcttcaaattacaag 332359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 212662 - 212720
Alignment:
Q  25 ggggctaaatcaaaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaatta 82  Q
    |||| |||||||||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  212662 gggggtaaatcaaaatttgctcaaattaacagggggtaaagcgaaatttgctcaaatta 212720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 169
Target Start/End: Original strand, 9377 - 9484
Alignment:
Q  61 aaatcgaaatttgctcaaatta-tagaggtttaaaccgaaattttctcaaattacagggtgcaaaatttgccatgaaggtccaagaaccaaagaatcttc 159  Q
    ||||||||||||||||||||||  |||||  |||||| |||||| ||||||||||| || |  |||||| | |||||||| ||| ||||||| |||||||    
T  9377 aaatcgaaatttgctcaaattacaagagg-gtaaacctaaatttgctcaaattacaaggggtgaaattttcaatgaaggt-caaaaaccaaaaaatcttc 9474  T
Q  160 aaattacaag 169  Q
    ||||||||||    
T  9475 aaattacaag 9484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 3513 - 3418
Alignment:
Q  23 agggggctaaatcaaaatttgctcaaattaaca-ggggcaaatcgaaatttgctcaaattatagaggtttaaaccgaaattttctcaaattacagg 117  Q
    |||||| |||| | ||||||||||||||||||| |||| ||| |||| ||| ||||||||| || ||  |||||| |||||| |||||||||||||    
T  3513 aggggggtaaaccgaaatttgctcaaattaacaaggggtaaaccgaagtttactcaaattacaggggggtaaacctaaatttgctcaaattacagg 3418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 306721 - 306761
Alignment:
Q  128 tgccatgaaggtccaagaaccaaagaatcttcaaattacaag 169  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  306721 tgccatgaaggtccaa-aaccaaagaatcttcaaattacaag 306761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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