View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11466_high_34 (Length: 229)
Name: NF11466_high_34
Description: NF11466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11466_high_34 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 32706586 - 32706808
Alignment:
| Q |
1 |
cacctaatccacacgattttactcacattcaaactcaagggaatgttt-ctgaattcaaactattatagtttccttcctgttgccataattttcataaag |
99 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32706586 |
cacctaatccacaagattttactcacattcaaactcaagggaatgttttctgaattcaaactattatagtttccttcctgttgccataattttcataaag |
32706685 |
T |
|
| Q |
100 |
aacagttnnnnnnntaggcatacttcaaaggacagagtgacgaagtacaattctacctccaaaacagacatgaattgaactaaatgttattgttactatc |
199 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32706686 |
aacagttaaaaaa-taggcatacttcaaaggacagagtgacgaagtacaattctacctccaaaacagacatgaattgaactaaatgttattgttactatc |
32706784 |
T |
|
| Q |
200 |
cctaagaatgtgtcctcaacatta |
223 |
Q |
| |
|
|||||||||||||||||||||||| |
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| T |
32706785 |
cctaagaatgtgtcctcaacatta |
32706808 |
T |
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