View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11466_low_15 (Length: 408)
Name: NF11466_low_15
Description: NF11466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11466_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 24 - 390
Target Start/End: Complemental strand, 28265818 - 28265452
Alignment:
| Q |
24 |
gttcgctgatctttcgcgttgtgaattggaaaaaagaagtatcagcaaatttcaagctggaacatgaatttagaagattataactcgtgaaaatgaagat |
123 |
Q |
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| T |
28265818 |
gttcgctgatctttcgcgttgtgaattggaaaaaagaagtatcagcaaatttcaagctggaacatgaatttagaagattataactcgtgaaaatgaagat |
28265719 |
T |
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| Q |
124 |
atcttcactaaagagatcaataattatccaatacaactaaattcatagcagctaacacaatctggaagaaaaatgtgagataaattgcgaatttgacata |
223 |
Q |
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| T |
28265718 |
atcttcactaaagagatcaataattatccaatacaactaaattcatagcagctaacacaatctggaagaaaaatgtgagataaattgcgaatttgacata |
28265619 |
T |
|
| Q |
224 |
aatgtttgaaatctggatgcagaatatttcgcacaattgatggatttgacaaatctgagatgaaaatcgagcatagaaaacagtaaattgagattcatcg |
323 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28265618 |
aatgtttgaaatctggatgcagaatatttcgcacaattgatggatttgacaaatctgagatgaaaatcgagcatagaaaacagtaaattgagattcatcg |
28265519 |
T |
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| Q |
324 |
aagaaaatgtgaaaggagttttagctcagattcgtcaaattcagaggtagatttgcgtggagaagga |
390 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28265518 |
aagaaaatgtgaaaggagttttagctcagattcgtcaaattcagaggtagatttgcgtggagaagga |
28265452 |
T |
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