View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11467_low_16 (Length: 292)

Name: NF11467_low_16
Description: NF11467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11467_low_16
NF11467_low_16
[»] chr3 (22 HSPs)
chr3 (244-292)||(45150291-45150339)
chr3 (245-284)||(7867744-7867783)
chr3 (245-292)||(40159863-40159910)
chr3 (246-292)||(462426-462472)
chr3 (246-292)||(1295332-1295378)
chr3 (246-292)||(51464297-51464343)
chr3 (245-290)||(18169156-18169201)
chr3 (246-291)||(19418183-19418228)
chr3 (242-291)||(24537215-24537264)
chr3 (240-285)||(43169774-43169819)
chr3 (245-290)||(45528969-45529014)
chr3 (242-283)||(47683797-47683838)
chr3 (245-290)||(49196695-49196740)
chr3 (244-292)||(11173456-11173504)
chr3 (236-292)||(11335327-11335383)
chr3 (244-292)||(34733316-34733364)
chr3 (244-292)||(36869862-36869910)
chr3 (244-284)||(38944174-38944214)
chr3 (241-285)||(38957533-38957576)
chr3 (248-292)||(47988510-47988554)
chr3 (248-292)||(47997797-47997841)
chr3 (248-292)||(48007084-48007128)
[»] chr5 (21 HSPs)
chr5 (20-58)||(3533155-3533193)
chr5 (245-292)||(36572690-36572737)
chr5 (242-291)||(3771032-3771081)
chr5 (244-292)||(8959158-8959206)
chr5 (245-292)||(125091-125138)
chr5 (245-292)||(14914371-14914418)
chr5 (245-292)||(34428159-34428206)
chr5 (241-292)||(36548405-36548456)
chr5 (245-292)||(38500942-38500989)
chr5 (241-292)||(41192582-41192633)
chr5 (246-284)||(6420672-6420710)
chr5 (246-292)||(12718405-12718451)
chr5 (246-292)||(12779631-12779677)
chr5 (246-292)||(34381012-34381058)
chr5 (246-292)||(39595272-39595318)
chr5 (246-292)||(42699057-42699103)
chr5 (244-284)||(582900-582940)
chr5 (244-292)||(8897380-8897428)
chr5 (245-281)||(14508193-14508229)
chr5 (241-292)||(18695313-18695365)
chr5 (244-292)||(36713203-36713251)
[»] chr7 (9 HSPs)
chr7 (244-292)||(19426578-19426626)
chr7 (243-292)||(40693553-40693602)
chr7 (244-284)||(45555972-45556012)
chr7 (249-292)||(1789994-1790037)
chr7 (246-292)||(20406541-20406587)
chr7 (246-292)||(30982379-30982425)
chr7 (246-292)||(42663084-42663130)
chr7 (247-285)||(46725618-46725656)
chr7 (243-283)||(23680061-23680101)
[»] chr4 (28 HSPs)
chr4 (244-292)||(35017151-35017199)
chr4 (241-292)||(47998589-47998640)
chr4 (246-292)||(51039141-51039187)
chr4 (243-284)||(47014936-47014977)
chr4 (246-290)||(169529-169573)
chr4 (242-290)||(22257223-22257271)
chr4 (245-292)||(4896525-4896572)
chr4 (245-292)||(12241057-12241104)
chr4 (245-292)||(33820361-33820408)
chr4 (243-290)||(34116567-34116614)
chr4 (246-289)||(39010165-39010208)
chr4 (245-292)||(42853938-42853985)
chr4 (246-292)||(18568840-18568886)
chr4 (246-292)||(22071496-22071542)
chr4 (246-292)||(25523223-25523269)
chr4 (245-283)||(33093138-33093176)
chr4 (242-292)||(45779316-45779366)
chr4 (245-290)||(6290461-6290506)
chr4 (245-290)||(9162065-9162110)
chr4 (246-291)||(11064115-11064160)
chr4 (243-292)||(29513721-29513770)
chr4 (243-292)||(56025253-56025302)
chr4 (241-292)||(4914901-4914953)
chr4 (244-292)||(10994177-10994225)
chr4 (245-285)||(38864768-38864808)
chr4 (244-284)||(41495011-41495051)
chr4 (245-292)||(42815403-42815451)
chr4 (244-284)||(51359823-51359863)
[»] chr8 (14 HSPs)
chr8 (245-292)||(36497660-36497707)
chr8 (244-292)||(35633994-35634042)
chr8 (244-292)||(37562166-37562214)
chr8 (245-292)||(39021468-39021515)
chr8 (245-292)||(45101395-45101442)
chr8 (246-292)||(6849286-6849332)
chr8 (243-285)||(8143241-8143283)
chr8 (246-292)||(43873716-43873762)
chr8 (245-290)||(26294188-26294233)
chr8 (245-290)||(26307445-26307490)
chr8 (244-285)||(41935268-41935309)
chr8 (244-292)||(6161946-6161994)
chr8 (246-290)||(21273737-21273781)
chr8 (244-292)||(27836178-27836226)
[»] chr2 (14 HSPs)
chr2 (245-292)||(14140362-14140409)
chr2 (246-290)||(3091741-3091785)
chr2 (246-290)||(28165129-28165173)
chr2 (244-292)||(36909868-36909916)
chr2 (245-292)||(4738597-4738644)
chr2 (245-292)||(31296870-31296917)
chr2 (245-292)||(33296096-33296143)
chr2 (246-292)||(39247488-39247534)
chr2 (247-292)||(9202541-9202586)
chr2 (240-285)||(37966361-37966406)
chr2 (242-290)||(6365182-6365230)
chr2 (244-292)||(10288148-10288196)
chr2 (243-283)||(14891112-14891152)
chr2 (244-292)||(16754394-16754442)
[»] chr1 (13 HSPs)
chr1 (245-292)||(8934621-8934668)
chr1 (245-292)||(18610772-18610819)
chr1 (241-292)||(30530599-30530650)
chr1 (241-292)||(39669801-39669852)
chr1 (247-292)||(9882684-9882729)
chr1 (243-292)||(46902610-46902659)
chr1 (242-292)||(30631868-30631919)
chr1 (241-284)||(45008197-45008240)
chr1 (245-292)||(50226904-50226951)
chr1 (243-292)||(50017448-50017497)
chr1 (244-292)||(8905726-8905774)
chr1 (244-292)||(18541076-18541124)
chr1 (244-292)||(51168793-51168841)
[»] scaffold0662 (1 HSPs)
scaffold0662 (243-284)||(1075-1116)
[»] chr6 (13 HSPs)
chr6 (244-292)||(9954546-9954594)
chr6 (245-292)||(11785354-11785401)
chr6 (245-292)||(12044331-12044378)
chr6 (245-284)||(27334857-27334896)
chr6 (245-284)||(27395597-27395636)
chr6 (245-292)||(28965865-28965912)
chr6 (245-291)||(15722529-15722575)
chr6 (246-292)||(29376740-29376786)
chr6 (246-292)||(32784738-32784784)
chr6 (243-292)||(21506333-21506382)
chr6 (244-292)||(30714678-30714726)
chr6 (244-292)||(30906688-30906736)
chr6 (246-290)||(32457279-32457323)
[»] scaffold0011 (1 HSPs)
scaffold0011 (245-292)||(219689-219736)
[»] scaffold0154 (2 HSPs)
scaffold0154 (246-284)||(19724-19762)
scaffold0154 (243-292)||(4312-4361)
[»] scaffold0041 (1 HSPs)
scaffold0041 (244-292)||(34406-34454)
[»] scaffold0001 (1 HSPs)
scaffold0001 (246-290)||(395861-395905)


Alignment Details
Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 45150339 - 45150291
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  45150339 tagagaaatgatacttatacaactattttgtgacaacttttagacaact 45150291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 284
Target Start/End: Complemental strand, 7867783 - 7867744
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttt 284  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  7867783 agagaaatgatatttgtacaactattttgtgacaactttt 7867744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 40159910 - 40159863
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||||||||| | |||||||||||||||||    
T  40159910 agagaaatgatatttgtacaactattttctaacaactttttgacaact 40159863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 462472 - 462426
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||| ||||||||||||||||| |||||||    
T  462472 gagaaatgatatttgtacaaccattttgtgacaacttttagacaact 462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 1295332 - 1295378
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||||||||||||| ||||||| |||||||    
T  1295332 gagaaatgatatttgtacaactattttgtgataacttttggacaact 1295378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 51464343 - 51464297
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||| | |||||||||||||||||||||||    
T  51464343 gagaaatgatatttgtacaaccactttgtgacaactttttgacaact 51464297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 18169156 - 18169201
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    |||||||||||| || |||||| | |||||||||||||||||||||    
T  18169156 agagaaatgatatttgtacaaccactttgtgacaactttttgacaa 18169201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 19418228 - 19418183
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaac 291  Q
    ||||||||||| || |||||| ||||| ||||||||||||||||||    
T  19418228 gagaaatgatatttgtacaaccattttatgacaactttttgacaac 19418183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 24537215 - 24537264
Alignment:
Q  242 tttagagaaatgatacttctacaactattttgtgacaactttttgacaac 291  Q
    ||||||||||||||| || |||| | | ||||||||||||||||||||||    
T  24537215 tttagagaaatgatatttgtacatccactttgtgacaactttttgacaac 24537264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 43169819 - 43169774
Alignment:
Q  240 gttttagagaaatgatacttctacaactattttgtgacaacttttt 285  Q
    |||| |||||||||||| || |||||| ||||||||||||||||||    
T  43169819 gtttaagagaaatgatatttgtacaaccattttgtgacaacttttt 43169774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 45529014 - 45528969
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    |||||||||||| || |||||||||||| ||||||||||| |||||    
T  45529014 agagaaatgatatttgtacaactattttttgacaacttttagacaa 45528969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 47683797 - 47683838
Alignment:
Q  242 tttagagaaatgatacttctacaactattttgtgacaacttt 283  Q
    ||||||||||||||| || |||||| ||||||||||||||||    
T  47683797 tttagagaaatgatatttgtacaaccattttgtgacaacttt 47683838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 49196695 - 49196740
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    |||||||||||| || |||||| |||||||||||||||| ||||||    
T  49196695 agagaaatgatatttgtacaaccattttgtgacaactttgtgacaa 49196740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 11173456 - 11173504
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||| ||||| || |||||| | |||||||||||||||||||||||    
T  11173456 tagagaattgatatttgtacaaccactttgtgacaactttttgacaact 11173504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 292
Target Start/End: Complemental strand, 11335383 - 11335327
Alignment:
Q  236 taatgttttagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||| ||| |||||||||||| || |||||| ||||| | |||||||||||||||||    
T  11335383 taatatttaagagaaatgatatttgtacaaccattttctaacaactttttgacaact 11335327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 34733364 - 34733316
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||| |||||||| || |||||| | |||||||||||||||||||||||    
T  34733364 tagataaatgatatttgtacaaccactttgtgacaactttttgacaact 34733316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 36869910 - 36869862
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||| ||||| ||||||||||| |||||||    
T  36869910 tagagaaatgatatttgtacaaccattttttgacaacttttagacaact 36869862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 38944214 - 38944174
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttt 284  Q
    ||||||||||||| || |||||||| |||||||||||||||    
T  38944214 tagagaaatgatatttgtacaactaatttgtgacaactttt 38944174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 38957576 - 38957533
Alignment:
Q  241 ttttagagaaatgatacttctacaactattttgtgacaacttttt 285  Q
    |||||||||||||||| || |||||||||||| ||||||||||||    
T  38957576 ttttagagaaatgatatttgtacaactatttt-tgacaacttttt 38957533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 47988554 - 47988510
Alignment:
Q  248 gaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||| || |||||||||||| | |||||||||||||||||    
T  47988554 gaaatgatatttgtacaactattttctaacaactttttgacaact 47988510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 47997841 - 47997797
Alignment:
Q  248 gaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||| || |||||||||||| | |||||||||||||||||    
T  47997841 gaaatgatatttgtacaactattttctaacaactttttgacaact 47997797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 292
Target Start/End: Complemental strand, 48007128 - 48007084
Alignment:
Q  248 gaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||| || |||||||||||| | |||||||||||||||||    
T  48007128 gaaatgatatttgtacaactattttctaacaactttttgacaact 48007084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 3533155 - 3533193
Alignment:
Q  20 gagagttcatcgcaacccataagcaaagcaacactcgct 58  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3533155 gagagttcatcgcaacccataagcaaagcaacactcgct 3533193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 36572690 - 36572737
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || || |||||||||||||||||||||||||||||    
T  36572690 agagaaatgatatttgtataactattttgtgacaactttttgacaact 36572737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 3771081 - 3771032
Alignment:
Q  242 tttagagaaatgatacttctacaactattttgtgacaactttttgacaac 291  Q
    |||||||||||||||  | |||||| ||||||||||||||||||||||||    
T  3771081 tttagagaaatgatatctgtacaaccattttgtgacaactttttgacaac 3771032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 8959158 - 8959206
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||||||| ||||||||||||| |||||||    
T  8959158 tagagaaatgatatttgtacaactattatgtgacaacttttggacaact 8959206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 125091 - 125138
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||||| |||||||||||||||||| ||||    
T  125091 agagaaatgatatttgtacaactactttgtgacaactttttgataact 125138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 14914371 - 14914418
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||| ||||||||||||||||| |||||||    
T  14914371 agagaaatgatatttgtacaaccattttgtgacaacttttggacaact 14914418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 34428159 - 34428206
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||||||||| ||||||||||| |||||||    
T  34428159 agagaaatgatatttgtacaactattttttgacaacttttagacaact 34428206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 241 - 292
Target Start/End: Complemental strand, 36548456 - 36548405
Alignment:
Q  241 ttttagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||||||| || || ||| |||||||||||||||| ||||||||    
T  36548456 ttttagagaaatgatatttgtataaccattttgtgacaactttctgacaact 36548405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 38500942 - 38500989
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||| |||||||||||| ||||||||||||    
T  38500942 agagaaatgatatttgtacaaccattttgtgacaattttttgacaact 38500989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 41192582 - 41192633
Alignment:
Q  241 ttttagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||||||| || |||||||||||||  |||| ||||||||||||    
T  41192582 ttttagagaaatgatatttgtacaactattttgctacaattttttgacaact 41192633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 284
Target Start/End: Original strand, 6420672 - 6420710
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttt 284  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  6420672 gagaaatgatatttctacaaccattttgtgacaactttt 6420710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 12718451 - 12718405
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||| | |||||||||||||||||||||||    
T  12718451 gagaaatgatatttgtacaaccaatttgtgacaactttttgacaact 12718405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 12779677 - 12779631
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||| | |||||||||||||||||||||||    
T  12779677 gagaaatgatatttgtacaaccaatttgtgacaactttttgacaact 12779631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 34381012 - 34381058
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||| | |||||||||||||||||||||||    
T  34381012 gagaaatgatatttgtacaaccactttgtgacaactttttgacaact 34381058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 39595272 - 39595318
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||| | |||||||||||||||||||||||    
T  39595272 gagaaatgatatttgtacaaccactttgtgacaactttttgacaact 39595318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 42699057 - 42699103
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||| |||||||||||||||||||| ||||    
T  42699057 gagaaatgatatttgtacaaccattttgtgacaactttttgataact 42699103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 582940 - 582900
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttt 284  Q
    ||||||||||||| || |||||||||||||||| |||||||    
T  582940 tagagaaatgatatttttacaactattttgtgataactttt 582900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 8897380 - 8897428
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||| ||||| ||||||| |||||||||||    
T  8897380 tagagaaatgatatttgtacaaccattttatgacaaccttttgacaact 8897428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 14508229 - 14508193
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaact 281  Q
    |||||||||||| || |||||||||||||||||||||    
T  14508229 agagaaatgatatttgtacaactattttgtgacaact 14508193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 18695313 - 18695365
Alignment:
Q  241 ttttagagaaatgatacttctacaactattttgtgacaactttt-tgacaact 292  Q
    |||||||||||||||| || |||||| ||||||| ||||||||| ||||||||    
T  18695313 ttttagagaaatgatatttgtacaaccattttgtaacaacttttgtgacaact 18695365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 36713251 - 36713203
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||| | ||||||||||||| |||||||||    
T  36713251 tagagaaatgatatttgtacaaccactttgtgacaacttcttgacaact 36713203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 19426578 - 19426626
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||| |||||||||||||||||||||||||    
T  19426578 tagagaaatgatatttgtacaaccattttgtgacaactttttgacaact 19426626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 40693602 - 40693553
Alignment:
Q  243 ttagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||||| || |||||||||||| ||||||||||| |||||||    
T  40693602 ttagagaaatgatatttgtacaactattttttgacaacttttagacaact 40693553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 284
Target Start/End: Original strand, 45555972 - 45556012
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttt 284  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  45555972 tagagaaatgatacatgtacaactattttgtgacaactttt 45556012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 292
Target Start/End: Original strand, 1789994 - 1790037
Alignment:
Q  249 aaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||| || ||||||||||||| ||||||||||||||||||    
T  1789994 aaatgatatttgtacaactattttgcgacaactttttgacaact 1790037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 20406541 - 20406587
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||| || ||||||||||||||||||||||    
T  20406541 gagaaatgatatttgtacaaccatcttgtgacaactttttgacaact 20406587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 30982425 - 30982379
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| |  || |||||||||||||||||||||||||||||    
T  30982425 gagaaatgatattcgtagaactattttgtgacaactttttgacaact 30982379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 42663084 - 42663130
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||| | |||||||||||||||||||||||||    
T  42663084 gagaaatgatatttgtacatccattttgtgacaactttttgacaact 42663130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 46725618 - 46725656
Alignment:
Q  247 agaaatgatacttctacaactattttgtgacaacttttt 285  Q
    |||||||||| || |||||||||||||||||||||||||    
T  46725618 agaaatgatatttatacaactattttgtgacaacttttt 46725656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 23680101 - 23680061
Alignment:
Q  243 ttagagaaatgatacttctacaactattttgtgacaacttt 283  Q
    ||||| |||||||| || |||||||||||||||||||||||    
T  23680101 ttagaaaaatgatatttgtacaactattttgtgacaacttt 23680061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000007; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 35017151 - 35017199
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  35017151 tagagaaatgatatttgtacaactattttgtgacaacttttttacaact 35017199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 47998589 - 47998640
Alignment:
Q  241 ttttagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||||||| || |||||| ||||||| |||||||||||||||||    
T  47998589 ttttagagaaatgatatttgtacaaccattttgtaacaactttttgacaact 47998640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 51039187 - 51039141
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||    
T  51039187 gagaaatgatatttgtacaactactttgtgacaactttttgacaact 51039141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 47014936 - 47014977
Alignment:
Q  243 ttagagaaatgatacttctacaactattttgtgacaactttt 284  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  47014936 ttagagaaatgatatttgtacaactattttgtgacaactttt 47014977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 169573 - 169529
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    ||||||||||| || |||||| |||||||||||||||||||||||    
T  169573 gagaaatgatatttgtacaaccattttgtgacaactttttgacaa 169529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 22257271 - 22257223
Alignment:
Q  242 tttagagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||||||    
T  22257271 tttagagaaatgatatttgaacaactactttgtgacaactttttgacaa 22257223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 4896572 - 4896525
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||| | |||||||||||||||||||||||    
T  4896572 agagaaatgatatttgtacaaccactttgtgacaactttttgacaact 4896525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 12241057 - 12241104
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||||||||| | |||||||||||||||||    
T  12241057 agagaaatgatatttgtacaactattttctaacaactttttgacaact 12241104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 33820408 - 33820361
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||||||||| | |||||||||||||||||    
T  33820408 agagaaatgatatttgtacaactattttctaacaactttttgacaact 33820361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 34116614 - 34116567
Alignment:
Q  243 ttagagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    |||||||||||||| || |||||| | |||||||||||||||||||||    
T  34116614 ttagagaaatgatatttgtacaaccactttgtgacaactttttgacaa 34116567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 39010208 - 39010165
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgaca 289  Q
    ||||||||||| || |||||| ||||||||||||||||||||||    
T  39010208 gagaaatgatatttgtacaaccattttgtgacaactttttgaca 39010165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 42853938 - 42853985
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||||||||| ||||||||||| |||||||    
T  42853938 agagaaatgatatttgtacaactattttttgacaacttttagacaact 42853985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 18568886 - 18568840
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||| ||||||||||||||||| |||||||    
T  18568886 gagaaatgatatttatacaaccattttgtgacaacttttggacaact 18568840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 22071496 - 22071542
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || ||||| ||||| ||||||||||||||||||||    
T  22071496 gagaaatgatatttgtacaattatttagtgacaactttttgacaact 22071542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 25523269 - 25523223
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||||||||| | |||||||||||||||||    
T  25523269 gagaaatgatatttgtacaactattttctcacaactttttgacaact 25523223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 283
Target Start/End: Complemental strand, 33093176 - 33093138
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaacttt 283  Q
    |||||||||||| || |||||||||||||||||||||||    
T  33093176 agagaaatgatatttgtacaactattttgtgacaacttt 33093138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 292
Target Start/End: Complemental strand, 45779366 - 45779316
Alignment:
Q  242 tttagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||||| || |||||||||||||| | || ||||||||||||    
T  45779366 tttagagaaatgatatttatacaactattttgttataattttttgacaact 45779316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 6290461 - 6290506
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    |||||||||||| || |||||||||||||| ||||||| |||||||    
T  6290461 agagaaatgatatttgtacaactattttgtaacaacttcttgacaa 6290506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 9162065 - 9162110
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    |||||||||||| || |||||  |||||||||||||||||||||||    
T  9162065 agagaaatgatatttgtacaatcattttgtgacaactttttgacaa 9162110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 11064160 - 11064115
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaac 291  Q
    ||||||||||| || |||||| | ||||||||||||||||||||||    
T  11064160 gagaaatgatatttgtacaaccactttgtgacaactttttgacaac 11064115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 29513770 - 29513721
Alignment:
Q  243 ttagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||||| || |||||| ||||||  |||||||||||||||||    
T  29513770 ttagagaaatgatatttgtacaaccattttgctacaactttttgacaact 29513721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 56025253 - 56025302
Alignment:
Q  243 ttagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||||| || |||||| ||||||  |||||||||||||||||    
T  56025253 ttagagaaatgatatttgtacaaccattttgctacaactttttgacaact 56025302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 4914901 - 4914953
Alignment:
Q  241 ttttagagaaatgatacttctacaactattttgtgacaactttt-tgacaact 292  Q
    |||||||||||||||| ||  |||||||||||||||||| |||| ||||||||    
T  4914901 ttttagagaaatgatatttgaacaactattttgtgacaatttttatgacaact 4914953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 10994225 - 10994177
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||| ||||||||||||  |||||||||||    
T  10994225 tagagaaatgatatttgtacaaccattttgtgacaatcttttgacaact 10994177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 38864808 - 38864768
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaacttttt 285  Q
    |||||||||||| || ||||| |||||||||||||||||||    
T  38864808 agagaaatgatatttgtacaattattttgtgacaacttttt 38864768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Original strand, 41495011 - 41495051
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttt 284  Q
    ||||||||||||| || |||||||||| |||||||||||||    
T  41495011 tagagaaatgatatttgtacaactattatgtgacaactttt 41495051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 42815403 - 42815451
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttt-tgacaact 292  Q
    |||||||||||| || |||||||||||||| ||||||||| ||||||||    
T  42815403 agagaaatgatatttgtacaactattttgtaacaacttttgtgacaact 42815451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 51359863 - 51359823
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttt 284  Q
    ||||||||||||| || |||||| |||||||||||||||||    
T  51359863 tagagaaatgatatttgtacaaccattttgtgacaactttt 51359823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 36497660 - 36497707
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||||||||||||||||||||| |||||||    
T  36497660 agagaaatgatatttgtacaactattttgtgacaacttttagacaact 36497707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 35634042 - 35633994
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| ||||||||| | ||| |||||||||||||||||||    
T  35634042 tagagaaatgatatttctacaaccactttctgacaactttttgacaact 35633994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 37562214 - 37562166
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||||||| ||||||||||||| |||||||    
T  37562214 tagagaaatgatatttgtacaactattatgtgacaacttttagacaact 37562166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 39021515 - 39021468
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||| ||||||||| |||||||||||||||    
T  39021515 agagaaatgatatttgtacaaccattttgtgataactttttgacaact 39021468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 45101395 - 45101442
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||| | |||||||||||||||||||||||    
T  45101395 agagaaatgatatttgtacaaccactttgtgacaactttttgacaact 45101442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 6849332 - 6849286
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||| ||||||||||||||||| |||||||    
T  6849332 gagaaatgatatttatacaaccattttgtgacaacttttagacaact 6849286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 8143283 - 8143241
Alignment:
Q  243 ttagagaaatgatacttctacaactattttgtgacaacttttt 285  Q
    |||||||||| ||| || |||||||||||||||||||||||||    
T  8143283 ttagagaaataatatttgtacaactattttgtgacaacttttt 8143241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 43873762 - 43873716
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||| |||||||||||| ||||||||||||    
T  43873762 gagaaatgatatttgtacaaccattttgtgacaattttttgacaact 43873716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 26294188 - 26294233
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    |||||||||||| |  |||||| |||||||||||||||||||||||    
T  26294188 agagaaatgatattggtacaaccattttgtgacaactttttgacaa 26294233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 26307445 - 26307490
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    |||||||||||| |  |||||| |||||||||||||||||||||||    
T  26307445 agagaaatgatattggtacaaccattttgtgacaactttttgacaa 26307490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 41935309 - 41935268
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaacttttt 285  Q
    |||||||||||||||| |||||||||||||| ||||| ||||    
T  41935309 tagagaaatgatacttgtacaactattttgtaacaacctttt 41935268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 6161946 - 6161994
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||| ||||| ||||||| |||||||||||    
T  6161946 tagagaaatgatatttgtacaaccattttatgacaaccttttgacaact 6161994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 21273781 - 21273737
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    ||||||||||| || |||||| ||||||||||||||| |||||||    
T  21273781 gagaaatgatatttgtacaaccattttgtgacaacttcttgacaa 21273737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 27836178 - 27836226
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||| |||||||| || |||||| | |||||||||||||||||||||||    
T  27836178 tagataaatgatatttgtacaaccactttgtgacaactttttgacaact 27836226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 14140409 - 14140362
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||||| |||||||||||||||||||||||    
T  14140409 agagaaatgatatttgtacaactaatttgtgacaactttttgacaact 14140362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 3091741 - 3091785
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    ||||||||||| || |||||||||||||||| |||||||||||||    
T  3091741 gagaaatgatatttgtacaactattttgtgataactttttgacaa 3091785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 28165129 - 28165173
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||    
T  28165129 gagaaatgatacttgtacaaccattttgtgacaacttttagacaa 28165173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 36909916 - 36909868
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||| ||||||||||||||||| |||||||    
T  36909916 tagagaaatgatatttgtacaaccattttgtgacaacttttggacaact 36909868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 4738644 - 4738597
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||| | |||||||||||||||||||||||    
T  4738644 agagaaatgatatttgtacaaccactttgtgacaactttttgacaact 4738597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 31296917 - 31296870
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||| ||||||||||||| |||||||||||    
T  31296917 agagaaatgatatttgtacaaccattttgtgacaacgttttgacaact 31296870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 33296143 - 33296096
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||| | |||||||||||||||||||||||    
T  33296143 agagaaatgatatttgtacaaccactttgtgacaactttttgacaact 33296096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 39247534 - 39247488
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||| ||||||||| |||||||||||||||    
T  39247534 gagaaatgatatttgtacaaccattttgtgataactttttgacaact 39247488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 9202586 - 9202541
Alignment:
Q  247 agaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||| ||||||||| ||||| |||||| ||||||||||||    
T  9202586 agaaatgatatttctacaaccattttatgacaattttttgacaact 9202541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 37966361 - 37966406
Alignment:
Q  240 gttttagagaaatgatacttctacaactattttgtgacaacttttt 285  Q
    ||||||||||||||||| || |||||| | ||||||||||||||||    
T  37966361 gttttagagaaatgatatttgtacaaccaatttgtgacaacttttt 37966406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 6365182 - 6365230
Alignment:
Q  242 tttagagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    ||||||||||||||| || |||||| | |||||||||| ||||||||||    
T  6365182 tttagagaaatgatatttgtacaaccactttgtgacaattttttgacaa 6365230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 10288148 - 10288196
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||||||||||||| || |||| |||||||    
T  10288148 tagagaaatgatatttgtacaactattttgtgataatttttagacaact 10288196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 14891152 - 14891112
Alignment:
Q  243 ttagagaaatgatacttctacaactattttgtgacaacttt 283  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  14891152 ttagagaaatgatatttgtacaactattttgtgataacttt 14891112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 16754394 - 16754442
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||| ||||| | |||||||||||||||||    
T  16754394 tagagaaatgatatttatacaacaattttctaacaactttttgacaact 16754442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 8934668 - 8934621
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||| ||| || ||||||||||||||||||||||||||||||||    
T  8934668 agagaaattatatttgtacaactattttgtgacaactttttgacaact 8934621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 18610772 - 18610819
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||||    
T  18610772 agagaaatgatatttgtacaactattttgtgacaacttttttacaact 18610819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 292
Target Start/End: Complemental strand, 30530650 - 30530599
Alignment:
Q  241 ttttagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||||||| || |||||| ||||||||||||||||| |||||||    
T  30530650 ttttagagaaatgatatttatacaaccattttgtgacaacttttagacaact 30530599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 39669801 - 39669852
Alignment:
Q  241 ttttagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||||||| || |||||| |||||||||||| ||||||||||||    
T  39669801 ttttagagaaatgatatttgtacaaccattttgtgacaattttttgacaact 39669852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 292
Target Start/End: Complemental strand, 9882729 - 9882684
Alignment:
Q  247 agaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||| || |||||||||||||||||||| |||||||||||    
T  9882729 agaaatgatatttgtacaactattttgtgacaacattttgacaact 9882684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 46902610 - 46902659
Alignment:
Q  243 ttagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||||||| || |||||||||||||||| |||| |||||||    
T  46902610 ttagagaaatgatacttgtataactattttgtgacaatttttggacaact 46902659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 292
Target Start/End: Complemental strand, 30631919 - 30631868
Alignment:
Q  242 tttagagaaatgatacttctacaacta-ttttgtgacaactttttgacaact 292  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||    
T  30631919 tttagagaaatgatacttgtacatctatttttgtgataactttttgacaact 30631868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 45008240 - 45008197
Alignment:
Q  241 ttttagagaaatgatacttctacaactattttgtgacaactttt 284  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||    
T  45008240 ttttagagaaatgatatttcaacaattattttgtgacaactttt 45008197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 50226951 - 50226904
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||| | |||||||||||||||||||||||    
T  50226951 agagaaatgatatttgtacaaccactttgtgacaactttttgacaact 50226904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 50017497 - 50017448
Alignment:
Q  243 ttagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||||| || |||||| ||||| | |||||||||||||||||    
T  50017497 ttagagaaatgatatttgtacaacaattttattacaactttttgacaact 50017448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 8905726 - 8905774
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||||||||| | ||||| |||||||||||    
T  8905726 tagagaaatgatatttgtacaactattttttaacaaccttttgacaact 8905774  T

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Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 18541124 - 18541076
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||| ||||| | |||||||||||||||||    
T  18541124 tagagaaatgatatttgtacaaccattttctaacaactttttgacaact 18541076  T

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Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 51168841 - 51168793
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||||||| |||||  ||||||||| ||||||| |||||||    
T  51168841 tagagaaatgatacttgtacaatcattttgtgataacttttagacaact 51168793  T

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Target: scaffold0662 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 1075 - 1116
Alignment:
Q  243 ttagagaaatgatacttctacaactattttgtgacaactttt 284  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  1075 ttagagaaatgatatttgtacaactattttgtgacaactttt 1116  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 9954546 - 9954594
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||| | |||||||||||||||||||||||    
T  9954546 tagagaaatgatatttgtacaaccaatttgtgacaactttttgacaact 9954594  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 11785354 - 11785401
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||| |||||||||||| ||||||||||||    
T  11785354 agagaaatgatatttgtacaaccattttgtgacaattttttgacaact 11785401  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 12044331 - 12044378
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||||||||| ||||||||||| |||||||    
T  12044331 agagaaatgatatttatacaactattttttgacaacttttagacaact 12044378  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 284
Target Start/End: Original strand, 27334857 - 27334896
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttt 284  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  27334857 agagaaatgatatttgtacaactattttgtgacaactttt 27334896  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 284
Target Start/End: Original strand, 27395597 - 27395636
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttt 284  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  27395597 agagaaatgatatttgtacaactattttgtgacaactttt 27395636  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 28965912 - 28965865
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||| ||||||| |||||||||||||||||    
T  28965912 agagaaatgatatttgtacaaccattttgttacaactttttgacaact 28965865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 15722575 - 15722529
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaac 291  Q
    |||||||||||| || |||||  ||||||||||||||||||||||||    
T  15722575 agagaaatgatatttgtacaatcattttgtgacaactttttgacaac 15722529  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 29376786 - 29376740
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || |||||| |||||||||||||||||| ||||||    
T  29376786 gagaaatgatatttttacaaccattttgtgacaactttttaacaact 29376740  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 32784738 - 32784784
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||| || ||||| |||||||| |||||||||||||||||    
T  32784738 gagaaatgatatttgtacaattattttgttacaactttttgacaact 32784784  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 21506333 - 21506382
Alignment:
Q  243 ttagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||| |||||||| || |||||| ||||| |||||||||||||||||||    
T  21506333 ttagataaatgatatttgtacaaccattttttgacaactttttgacaact 21506382  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 30714678 - 30714726
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| || |||||  ||||||||||| |||||||||||||    
T  30714678 tagagaaatgatatttgtacaatcattttgtgacagctttttgacaact 30714726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 30906736 - 30906688
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    ||||||||||||| |||||||   ||||| |||||||||||||||||||    
T  30906736 tagagaaatgatatttctacattcattttatgacaactttttgacaact 30906688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 32457323 - 32457279
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    ||||||||||| || |||||| | |||||||||||||||||||||    
T  32457323 gagaaatgatatttgtacaaccactttgtgacaactttttgacaa 32457279  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 219736 - 219689
Alignment:
Q  245 agagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||| || |||||| | |||||||||||||||||||||||    
T  219736 agagaaatgatatttgtacaaccactttgtgacaactttttgacaact 219689  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 284
Target Start/End: Complemental strand, 19762 - 19724
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttt 284  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  19762 gagaaatgatatttgtacaactattttgtgacaactttt 19724  T

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Target: scaffold0154; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 4312 - 4361
Alignment:
Q  243 ttagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||||||||||||| || |||||| ||||| ||| |||||||||||||||    
T  4312 ttagagaaatgatatttgtacaaccattttatgataactttttgacaact 4361  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 34406 - 34454
Alignment:
Q  244 tagagaaatgatacttctacaactattttgtgacaactttttgacaact 292  Q
    |||| |||||||| || |||||||||||| |||||||||| ||||||||    
T  34406 tagataaatgatatttgtacaactattttttgacaactttgtgacaact 34454  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 395861 - 395905
Alignment:
Q  246 gagaaatgatacttctacaactattttgtgacaactttttgacaa 290  Q
    ||||||||||| |||||||||| |||||||| || ||||||||||    
T  395861 gagaaatgatatttctacaactcttttgtgataattttttgacaa 395905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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