View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11469_high_1 (Length: 467)
Name: NF11469_high_1
Description: NF11469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11469_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 405; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 14 - 450
Target Start/End: Complemental strand, 37696527 - 37696091
Alignment:
| Q |
14 |
agatgaagaaatgcattgcttcataagtgcatggcccaatccgtcgccaatggattctgtaatttacagtaaactacttacactagtcatctaagctaat |
113 |
Q |
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| T |
37696527 |
agatgaagaaatacattgcttcataagtgcatggccgaatccgtcgccaatggattctataatttacagtaaactacttacactagtcatctaagctaat |
37696428 |
T |
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| Q |
114 |
tttaattcgatgaggggcacacttacacaataatgagtcaccggaaaacaataactaaggtctgaactacgaagagacaataatttctggagaagttgtg |
213 |
Q |
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| T |
37696427 |
tttaattcgatgaggggcacacttacacaataatgagtcaccggaaaacaataactaaggtctgaactaccaagagacaataatttctggaaaagttgtg |
37696328 |
T |
|
| Q |
214 |
aatgacaaggtaagaagatgtgatcattgtggaaacctttttagaaaaatgtcagcagcacactctttgatactctcttcgttaggtgaaatccagctaa |
313 |
Q |
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| T |
37696327 |
tatgacaaggtaagaagatgtgatcattgtagaaacctttttagaaaaatgtcagcagcacactctttgatactctcttcgttaggtgaaatccagctaa |
37696228 |
T |
|
| Q |
314 |
tagatagtggacatcactaatagggtccacatgagatttcacccaataatagaaagtgttgaaatgactgtcaaaagtgtcttgctagcatttttcatct |
413 |
Q |
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| T |
37696227 |
tagatagtggacatcactaatagggtccacatgagatttcacccaataatagaaagtgttgaaatgactgtcaaaagtgtcttgctagcatttttcatct |
37696128 |
T |
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| Q |
414 |
ttttggacaaatcttgagctttcctagttgtcatatt |
450 |
Q |
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| T |
37696127 |
ttttggacaaatcttgagttttcctagttgtcatatt |
37696091 |
T |
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