View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11470_high_28 (Length: 349)
Name: NF11470_high_28
Description: NF11470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11470_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 18 - 338
Target Start/End: Original strand, 43126425 - 43126737
Alignment:
| Q |
18 |
ggaattatattttacatgtattcatcacaatgagcaaggattttgtaactgttttttgttgcttgtgttgtaatttattttagttaggtgtatatcaaca |
117 |
Q |
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| T |
43126425 |
ggaattatattttacatgtattcatcacaatgagcaaggattttgtaactgttttttgttgcttgtgttgtaatttattttagt-----gtatatcaaca |
43126519 |
T |
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| Q |
118 |
tgtcttatcattcttttaggtttagaaactgttctgaaaacgcattagtagttagataggtggcttaaatttgtgtgtttgtttaataactaatctattg |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
43126520 |
tgtcttatcattcttttaggtttagaaactgttctgaaaacgcattagtagttagataggtggcttaaatt--tgtgtttgtttaataactaatctattg |
43126617 |
T |
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| Q |
218 |
gtcannnnnnnacataaattggtgaataatctaggtgtctcaaagtttctgtttcaatttatttgttttccttaaatagtagttatctacctgtatgttc |
317 |
Q |
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|||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43126618 |
gtcatttttttacataaattggtgaataatctaggtgtctc-aagtttctgtttcaatttatttgttttccttaaatagtagttatctacctgtatgttc |
43126716 |
T |
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| Q |
318 |
tatactattcattgagttcat |
338 |
Q |
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||||||||||||||||||||| |
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| T |
43126717 |
tatactattcattgagttcat |
43126737 |
T |
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