View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11470_high_6 (Length: 639)

Name: NF11470_high_6
Description: NF11470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11470_high_6
NF11470_high_6
[»] chr5 (13 HSPs)
chr5 (17-337)||(22071139-22071460)
chr5 (338-578)||(26494772-26495012)
chr5 (338-578)||(23670790-23671030)
chr5 (338-564)||(26361974-26362200)
chr5 (338-564)||(27870384-27870610)
chr5 (378-505)||(17023516-17023640)
chr5 (408-575)||(21981575-21981742)
chr5 (408-575)||(21998954-21999121)
chr5 (408-548)||(21560055-21560194)
chr5 (483-566)||(4396899-4396982)
chr5 (408-526)||(8953597-8953716)
chr5 (481-578)||(7784540-7784635)
chr5 (408-465)||(21636761-21636818)
[»] chr4 (23 HSPs)
chr4 (338-578)||(33847773-33848013)
chr4 (338-578)||(15722532-15722772)
chr4 (338-578)||(16279239-16279479)
chr4 (338-578)||(28384211-28384451)
chr4 (338-578)||(53388607-53388847)
chr4 (338-564)||(15281046-15281272)
chr4 (338-527)||(1103543-1103732)
chr4 (415-578)||(41790645-41790809)
chr4 (407-578)||(15243090-15243263)
chr4 (483-578)||(10312834-10312930)
chr4 (480-578)||(27026962-27027061)
chr4 (483-578)||(13742229-13742324)
chr4 (483-578)||(16358578-16358673)
chr4 (480-578)||(6510808-6510907)
chr4 (336-453)||(18220466-18220585)
chr4 (338-575)||(16372395-16372632)
chr4 (407-456)||(13876992-13877041)
chr4 (508-578)||(21190605-21190677)
chr4 (472-578)||(286193-286299)
chr4 (472-578)||(47127698-47127804)
chr4 (407-455)||(28916339-28916387)
chr4 (472-578)||(10976878-10976984)
chr4 (407-451)||(13880408-13880452)
[»] chr2 (25 HSPs)
chr2 (338-578)||(23340181-23340421)
chr2 (338-578)||(21240112-21240352)
chr2 (337-578)||(21242662-21242903)
chr2 (338-578)||(37378396-37378636)
chr2 (407-578)||(31502523-31502695)
chr2 (407-578)||(31505089-31505261)
chr2 (480-578)||(12628681-12628780)
chr2 (483-578)||(44620047-44620142)
chr2 (338-465)||(21124604-21124733)
chr2 (338-493)||(23147915-23148072)
chr2 (338-493)||(23559705-23559862)
chr2 (510-578)||(20592047-20592114)
chr2 (338-526)||(23079226-23079414)
chr2 (481-570)||(24159672-24159761)
chr2 (408-455)||(10040973-10041020)
chr2 (408-451)||(20354060-20354103)
chr2 (407-454)||(22108743-22108790)
chr2 (472-578)||(41685655-41685761)
chr2 (338-410)||(17629829-17629902)
chr2 (408-456)||(6479187-6479235)
chr2 (481-569)||(25650615-25650702)
chr2 (338-438)||(31517590-31517689)
chr2 (397-464)||(24683311-24683378)
chr2 (408-456)||(23084754-23084803)
chr2 (66-162)||(22073162-22073258)
[»] chr7 (27 HSPs)
chr7 (338-578)||(9863042-9863282)
chr7 (338-578)||(17506722-17506962)
chr7 (338-578)||(17546252-17546492)
chr7 (339-578)||(13396471-13396710)
chr7 (336-578)||(41283003-41283245)
chr7 (338-578)||(38413749-38413989)
chr7 (335-578)||(1501315-1501557)
chr7 (335-564)||(13734453-13734682)
chr7 (338-505)||(17065004-17065172)
chr7 (338-465)||(14266671-14266800)
chr7 (337-578)||(15724743-15724981)
chr7 (483-566)||(16929619-16929702)
chr7 (510-570)||(39996406-39996466)
chr7 (486-566)||(16928528-16928608)
chr7 (338-575)||(7508185-7508421)
chr7 (338-465)||(14256462-14256591)
chr7 (408-456)||(13773179-13773227)
chr7 (472-578)||(48784299-48784405)
chr7 (338-394)||(13407114-13407170)
chr7 (414-454)||(15732460-15732500)
chr7 (397-465)||(16669234-16669302)
chr7 (397-465)||(17643602-17643670)
chr7 (378-462)||(23441654-23441738)
chr7 (408-455)||(10629158-10629205)
chr7 (408-455)||(10638853-10638900)
chr7 (338-436)||(21736132-21736232)
chr7 (409-453)||(39996521-39996565)
[»] chr6 (30 HSPs)
chr6 (338-578)||(22586104-22586344)
chr6 (338-578)||(22590935-22591175)
chr6 (338-578)||(2288850-2289090)
chr6 (338-578)||(8521806-8522046)
chr6 (337-578)||(15687134-15687375)
chr6 (338-412)||(25803823-25803897)
chr6 (338-569)||(1638390-1638620)
chr6 (483-578)||(8717730-8717825)
chr6 (338-569)||(1641417-1641647)
chr6 (338-578)||(17525673-17525909)
chr6 (485-578)||(15538306-15538399)
chr6 (337-578)||(1591184-1591422)
chr6 (486-568)||(16804088-16804170)
chr6 (482-564)||(29491871-29491953)
chr6 (338-465)||(35243914-35244044)
chr6 (486-568)||(16828954-16829036)
chr6 (378-464)||(29264867-29264952)
chr6 (407-456)||(23622094-23622143)
chr6 (472-578)||(16101445-16101551)
chr6 (336-471)||(16886340-16886476)
chr6 (408-455)||(19445130-19445177)
chr6 (378-464)||(21475685-21475770)
chr6 (408-469)||(18136885-18136946)
chr6 (414-454)||(1583661-1583701)
chr6 (499-578)||(12595088-12595168)
chr6 (408-548)||(24440296-24440436)
chr6 (408-455)||(16134457-16134504)
chr6 (338-438)||(18316708-18316810)
chr6 (378-464)||(21469084-21469169)
chr6 (378-462)||(25748899-25748983)
[»] chr3 (25 HSPs)
chr3 (338-578)||(53223643-53223883)
chr3 (407-578)||(19442964-19443134)
chr3 (480-578)||(54045946-54046045)
chr3 (407-550)||(19445217-19445358)
chr3 (480-578)||(15010995-15011094)
chr3 (483-578)||(14952440-14952536)
chr3 (480-578)||(604523-604623)
chr3 (480-578)||(7631390-7631489)
chr3 (483-578)||(18957958-18958053)
chr3 (483-578)||(39229921-39230016)
chr3 (485-578)||(55293286-55293379)
chr3 (376-477)||(15012693-15012795)
chr3 (485-578)||(16798819-16798912)
chr3 (338-505)||(9224-9389)
chr3 (472-578)||(2035934-2036040)
chr3 (472-578)||(2039675-2039781)
chr3 (472-578)||(2043416-2043522)
chr3 (472-578)||(14040747-14040853)
chr3 (472-578)||(21070395-21070501)
chr3 (499-578)||(14037305-14037385)
chr3 (408-465)||(12856646-12856703)
chr3 (411-456)||(15231525-15231570)
chr3 (411-456)||(15237393-15237438)
chr3 (408-465)||(21081939-21081996)
chr3 (399-451)||(42108502-42108553)
[»] scaffold0525 (1 HSPs)
scaffold0525 (338-578)||(7971-8211)
[»] chr1 (18 HSPs)
chr1 (337-578)||(295470-295711)
chr1 (338-564)||(37357508-37357734)
chr1 (338-480)||(21107889-21108031)
chr1 (485-578)||(24086614-24086708)
chr1 (483-578)||(14433260-14433355)
chr1 (407-578)||(21118673-21118847)
chr1 (483-578)||(22071571-22071666)
chr1 (337-526)||(18822789-18822978)
chr1 (408-455)||(13529696-13529743)
chr1 (472-578)||(36180704-36180810)
chr1 (341-465)||(21987666-21987792)
chr1 (407-456)||(18251411-18251460)
chr1 (407-456)||(18269423-18269472)
chr1 (407-456)||(18274101-18274150)
chr1 (472-578)||(20630371-20630477)
chr1 (376-438)||(21738040-21738102)
chr1 (508-570)||(21529412-21529476)
chr1 (408-456)||(21529529-21529577)
[»] chr8 (19 HSPs)
chr8 (338-578)||(17794278-17794518)
chr8 (407-578)||(21414126-21414299)
chr8 (483-578)||(22146331-22146426)
chr8 (338-548)||(22435258-22435465)
chr8 (472-574)||(21416134-21416236)
chr8 (483-568)||(24708721-24708806)
chr8 (485-569)||(44523796-44523881)
chr8 (407-455)||(15005555-15005603)
chr8 (408-548)||(17273338-17273477)
chr8 (338-469)||(22522558-22522692)
chr8 (338-456)||(33087497-33087615)
chr8 (397-493)||(20021039-20021134)
chr8 (336-456)||(20384475-20384594)
chr8 (407-505)||(32948955-32949051)
chr8 (376-465)||(25625423-25625513)
chr8 (397-505)||(19986496-19986599)
chr8 (499-578)||(22060323-22060403)
chr8 (508-570)||(22616096-22616158)
chr8 (429-469)||(15266572-15266612)
[»] scaffold0094 (1 HSPs)
scaffold0094 (338-578)||(43806-44046)
[»] scaffold1885 (1 HSPs)
scaffold1885 (338-555)||(1051-1268)
[»] scaffold0021 (2 HSPs)
scaffold0021 (337-576)||(143543-143782)
scaffold0021 (337-564)||(134847-135074)
[»] scaffold0028 (2 HSPs)
scaffold0028 (17-337)||(117222-117542)
scaffold0028 (378-465)||(93409-93496)
[»] scaffold0023 (1 HSPs)
scaffold0023 (407-578)||(157909-158082)
[»] scaffold0586 (1 HSPs)
scaffold0586 (472-574)||(965-1067)
[»] scaffold0079 (1 HSPs)
scaffold0079 (483-578)||(22065-22160)
[»] scaffold0491 (1 HSPs)
scaffold0491 (480-578)||(9890-9989)
[»] scaffold0044 (1 HSPs)
scaffold0044 (480-578)||(6678-6776)
[»] scaffold0859 (1 HSPs)
scaffold0859 (337-548)||(745-954)
[»] scaffold0247 (1 HSPs)
scaffold0247 (481-570)||(3828-3917)
[»] scaffold0447 (1 HSPs)
scaffold0447 (408-458)||(13221-13271)
[»] scaffold0383 (1 HSPs)
scaffold0383 (408-458)||(11216-11266)
[»] scaffold0130 (2 HSPs)
scaffold0130 (376-438)||(12098-12160)
scaffold0130 (499-581)||(3361-3441)
[»] scaffold0042 (1 HSPs)
scaffold0042 (408-490)||(52931-53011)
[»] scaffold1336 (1 HSPs)
scaffold1336 (397-505)||(1455-1561)
[»] scaffold0090 (1 HSPs)
scaffold0090 (481-570)||(32925-33014)
[»] scaffold0008 (1 HSPs)
scaffold0008 (338-465)||(125638-125767)
[»] scaffold0609 (1 HSPs)
scaffold0609 (407-455)||(8884-8932)
[»] scaffold0395 (1 HSPs)
scaffold0395 (480-575)||(9574-9670)
[»] scaffold0253 (1 HSPs)
scaffold0253 (397-465)||(4635-4703)
[»] scaffold0635 (1 HSPs)
scaffold0635 (408-455)||(6050-6097)
[»] scaffold0004 (2 HSPs)
scaffold0004 (408-505)||(383497-383592)
scaffold0004 (338-469)||(382802-382936)
[»] scaffold0956 (1 HSPs)
scaffold0956 (399-464)||(3215-3280)
[»] scaffold0016 (2 HSPs)
scaffold0016 (501-570)||(198448-198517)
scaffold0016 (338-436)||(119385-119485)
[»] scaffold0013 (1 HSPs)
scaffold0013 (408-469)||(889-950)
[»] scaffold0192 (2 HSPs)
scaffold0192 (378-470)||(20155-20247)
scaffold0192 (408-465)||(30852-30909)
[»] scaffold0575 (2 HSPs)
scaffold0575 (397-464)||(7972-8038)
scaffold0575 (397-464)||(737-804)
[»] scaffold0124 (1 HSPs)
scaffold0124 (472-578)||(43062-43168)
[»] scaffold0003 (1 HSPs)
scaffold0003 (472-578)||(32556-32662)
[»] scaffold0116 (1 HSPs)
scaffold0116 (472-573)||(25396-25497)
[»] scaffold0049 (1 HSPs)
scaffold0049 (338-465)||(43618-43748)
[»] scaffold0970 (1 HSPs)
scaffold0970 (414-455)||(3183-3224)
[»] scaffold0486 (1 HSPs)
scaffold0486 (408-465)||(2351-2408)
[»] scaffold0371 (2 HSPs)
scaffold0371 (408-465)||(7786-7843)
scaffold0371 (408-456)||(4728-4777)
[»] scaffold0020 (2 HSPs)
scaffold0020 (408-465)||(177317-177374)
scaffold0020 (429-465)||(174882-174918)
[»] scaffold0413 (1 HSPs)
scaffold0413 (408-456)||(5164-5212)
[»] scaffold0037 (1 HSPs)
scaffold0037 (338-394)||(99196-99252)
[»] scaffold0511 (1 HSPs)
scaffold0511 (338-438)||(692-794)
[»] scaffold0503 (1 HSPs)
scaffold0503 (376-438)||(3157-3219)
[»] scaffold0462 (1 HSPs)
scaffold0462 (376-469)||(9977-10071)
[»] scaffold0697 (2 HSPs)
scaffold0697 (508-570)||(369-433)
scaffold0697 (408-456)||(486-534)
[»] scaffold0149 (2 HSPs)
scaffold0149 (408-456)||(28698-28747)
scaffold0149 (482-549)||(14537-14604)
[»] scaffold1433 (1 HSPs)
scaffold1433 (379-438)||(251-311)
[»] scaffold0069 (1 HSPs)
scaffold0069 (408-464)||(33901-33957)


Alignment Details
Target: chr5 (Bit Score: 258; Significance: 1e-143; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 17 - 337
Target Start/End: Original strand, 22071139 - 22071460
Alignment:
Q  17 atcaggtcgatcgtgaggtttcaaattatcctttaggagacacctttgaatttctggccaattaggattgcaagtgaatgtgataaagatgtctgggaaa 116  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22071139 atcaggtcgatcgtgaggtttcaaattattctttaggagacacctttgaatttctggccaattaagattgcaagtgaatgtgataaagatgtctgggaaa 22071238  T
Q  117 ccaacattgctagatatagccataccattaaaatagagctgatccaaatatcttcgacttccaacaaaggtagatggaagaacaatccgcttacc-nnnn 215  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||         
T  22071239 ccaacattgctagatatagccataccatcaaaatagagctgatccaaatatctttggcttccaacaaaggtagatggaagaacaatccgcttaccttttt 22071338  T
Q  216 nnnngttgagatgtctgtccatcagtggcagttttgttgctcaaccgatgatatttggaaactcttagttttgattggtttctcctcaaccaattgagtc 315  Q
         ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22071339 tttttttgagatgtctgtccatcaatggcagttttgttactcaaccgatgatatttggaaactcttagttttgattggtttctcctcaaccaattgagtc 22071438  T
Q  316 tttctgcttcaatcattgtaaa 337  Q
    ||||||||||||||||||||||    
T  22071439 tttctgcttcaatcattgtaaa 22071460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 338 - 578
Target Start/End: Original strand, 26494772 - 26495012
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26494772 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 26494871  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26494872 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 26494971  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26494972 cggcctcaacaaaatatctgtaaagattaaattcaacatca 26495012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 338 - 578
Target Start/End: Original strand, 23670790 - 23671030
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  23670790 tgtaacaccccgttttcccaacatcataaatatcaaagtaaatcagagtttaacacctaatgggcatgctacactgcttttcaaaaatccataaatagaa 23670889  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  23670890 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaatccttggcaca 23670989  T
Q  538 cggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
     ||||||||| ||||||||| ||||||| ||| |||||||||    
T  23670990 tggcctcaacaaaaatatct-taaagatcaaaatcaacatca 23671030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 338 - 564
Target Start/End: Complemental strand, 26362200 - 26361974
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26362200 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 26362101  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgtt-aaacaacttccaataaaaccttggcac 536  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || |||||||||    
T  26362100 taaagtactatttattaaattcaactttgataaaatatcagttcattgcagcggaaagtatttttcaatgttaaaacaacttccaat-aacccttggcac 26362002  T
Q  537 acggcctcaacaaaatatctgtaaagat 564  Q
    | ||||||||| |||||||| |||||||    
T  26362001 atggcctcaaccaaatatctttaaagat 26361974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 338 - 564
Target Start/End: Complemental strand, 27870610 - 27870384
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  27870610 tgtaccaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgttacactgcttttcaaaaatccataaatagaa 27870511  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgtt-aaacaacttccaataaaaccttggcac 536  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || |||||||||    
T  27870510 taaagtactatttattaaattcaactttgataaaatatcagttcattgcagcggaaagtatttttcaatgttaaaacaacttccaat-aacccttggcac 27870412  T
Q  537 acggcctcaacaaaatatctgtaaagat 564  Q
    | |||||||||||||||||| |||||||    
T  27870411 atggcctcaacaaaatatctttaaagat 27870384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 378 - 505
Target Start/End: Complemental strand, 17023640 - 17023516
Alignment:
Q  378 aatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaatatca 477  Q
    |||||||||| |||| |  ||||| |||  |||||||||||||||| | | |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  17023640 aatcagagttcaacaacaaacgggaatgtcacactgcttttcaaaatttcttaaatagaataaagtactatttatt-aaatcaactttgataaaatatca 17023542  T
Q  478 gttcattgcagcggaaagtatttttcaa 505  Q
     | || ||||||||||  ||||||||||    
T  17023541 atacactgcagcggaa--tatttttcaa 17023516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 408 - 575
Target Start/End: Complemental strand, 21981742 - 21981575
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaa-atcaactttgataaa--atatcagttcattgcagcggaaagtatttttca 504  Q
    |||||||||||||||||| |||||||||||| || | |||||||||||| |  | ||||| ||||  |||||| ||||| |||||||||  |  ||||||    
T  21981742 acactgcttttcaaaaattcataaatagaataaaatgctatttattaaataatagctttggtaaaacatatcaattcatcgcagcggaa--ttattttca 21981645  T
Q  505 acgttaaacaacttccaataaaaccttggcacacggcctcaaca-aaatatctgtaaagattaaattcaaca 575  Q
    || |||||||||||| || ||| |  ||||||| |||||||||| || ||||| |||||||| ||| |||||    
T  21981644 acattaaacaacttctaacaaatc--tggcacatggcctcaacataattatctttaaagatttaatccaaca 21981575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 408 - 575
Target Start/End: Complemental strand, 21999121 - 21998954
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaa-atcaactttgataaa--atatcagttcattgcagcggaaagtatttttca 504  Q
    |||||||||||||||||| |||||||||||| || |  ||||||||||| |  | ||||| ||||  |||||| ||||| |||||||||  |  ||||||    
T  21999121 acactgcttttcaaaaattcataaatagaataaaatgttatttattaaataatagctttggtaaaacatatcaattcatcgcagcggaa--ttattttca 21999024  T
Q  505 acgttaaacaacttccaataaaaccttggcacacggcctcaaca-aaatatctgtaaagattaaattcaaca 575  Q
    || |||||||||||| |||||| |  ||||||| |||||||||| || ||||| |||||||| ||| |||||    
T  21999023 acattaaacaacttcaaataaatc--tggcacatggcctcaacataattatctttaaagatttaatccaaca 21998954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 408 - 548
Target Start/End: Complemental strand, 21560194 - 21560055
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaa-atcaactttgataaa--atatcagttcattgcagcggaaagtatttttca 504  Q
    |||||||||||||||||| |||||||||||| || ||||| |||||||| |  | ||||| ||||  ||||||  |||||||||| |||| || ||||||    
T  21560194 acactgcttttcaaaaattcataaatagaataaaatactagttattaaataatagctttggtaaaacatatcaactcattgcagc-gaaatta-ttttca 21560097  T
Q  505 acgttaaacaacttccaataaaaccttggcacacggcctcaaca 548  Q
    || ||||||||||| ||||||| |  ||||||| ||||||||||    
T  21560096 acattaaacaactttcaataaatc--tggcacatggcctcaaca 21560055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 483 - 566
Target Start/End: Original strand, 4396899 - 4396982
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaa-caacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagatta 566  Q
    |||||||||||| ||| |||||| |||||| |||||||||||||  |||| ||||| |||||||||||||||| | |||||||||    
T  4396899 ttgcagcggaaaatatctttcaatgttaaaacaacttccaataac-ccttagcacatggcctcaacaaaatatttttaaagatta 4396982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 526
Target Start/End: Complemental strand, 8953716 - 8953597
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaa-atcaactttgataaa--atatcagttcattgcagcggaaagtatttttca 504  Q
    |||||||||||||||||| |||||| ||||| || |  ||||||||||| |  ||||||| ||||  |||||| ||||| |||||||||  |  ||||||    
T  8953716 acactgcttttcaaaaattcataaaaagaataaaatgatatttattaaataataactttggtaaaacatatcaattcatcgcagcggaa--ttattttca 8953619  T
Q  505 acgttaaacaacttccaataaa 526  Q
    || ||||||||||| |||||||    
T  8953618 acattaaacaactttcaataaa 8953597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 578
Target Start/End: Original strand, 7784540 - 7784635
Alignment:
Q  481 cattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||| |  |||| ||| |||||||||||||||  ||  ||||||||| ||| ||||||| |||||| | ||||||||| |||||||||    
T  7784540 cattgcagcggaaaattattttaaacattaaacaacttccaa-caattcttggcacatggcatcaacaatatatctttgaagattaaa-tcaacatca 7784635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 21636818 - 21636761
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaacttt 465  Q
    |||||||||||||||| | | |||||||||| || | |||| ||||||||||||||||    
T  21636818 acactgcttttcaaaatttcttaaatagaataaaatgctatatattaaaatcaacttt 21636761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 233; Significance: 1e-128; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 338 - 578
Target Start/End: Original strand, 33847773 - 33848013
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33847773 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 33847872  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33847873 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcagaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 33847972  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33847973 cggcctcaacaaaatatctgtaaagattaaattcaacatca 33848013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 338 - 578
Target Start/End: Complemental strand, 15722772 - 15722532
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  15722772 tgtaacaccctgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacacttcttttcaaaaattcataaatagaa 15722673  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15722672 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 15722573  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15722572 cggcctcaacaaaatatctgtaaagattaaattcaacatca 15722532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 338 - 578
Target Start/End: Complemental strand, 16279479 - 16279239
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16279479 tgtaacaccccgttttcccaaaaacataaatctaaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 16279380  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  16279379 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcaacggaaaatatttttcaacattaaacaacttccaataaaaccttggcaca 16279280  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16279279 cggcctcaacaaaatatctgtaaagattaaattcaacatca 16279239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 338 - 578
Target Start/End: Original strand, 28384211 - 28384451
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  28384211 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaatgggcatgctacactgcttttcaaaaatccataaatagaa 28384310  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  28384311 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaatcttggcaca 28384410  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  28384411 cgacctcaacaaaatatctgtaaagattaaattcaacatca 28384451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 338 - 578
Target Start/End: Complemental strand, 53388847 - 53388607
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || | |||| |||||||||||||||||||||||||||||||    
T  53388847 tgtaacatcccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacagacatgttacactgcttttcaaaaatccataaatagaa 53388748  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  53388747 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 53388648  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  53388647 cggcctcaacaaaatatatgtaaagattaaattcaacatca 53388607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 338 - 564
Target Start/End: Complemental strand, 15281272 - 15281046
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  15281272 tgtaacaccccgttttcccaacaacataaatatgaaagtaaatcagagtttaacaccttatgggcatgctacactgcttttcaaaaatccataaatagaa 15281173  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgtt-aaacaacttccaataaaaccttggcac 536  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || |||||||||    
T  15281172 taaagtactatttattaaattcaactttgataaaatatcagttcattgcagcggaaagtatttttcaatgttaaaacaacttccaat-aacccttggcac 15281074  T
Q  537 acggcctcaacaaaatatctgtaaagat 564  Q
    | |||||||||||||||||| |||||||    
T  15281073 atggcctcaacaaaatatctttaaagat 15281046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 338 - 527
Target Start/End: Complemental strand, 1103732 - 1103543
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1103732 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 1103633  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaa 527  Q
    | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  1103632 taaagtactatttattaatatcaactttgataaaatatcagttcattgcagcggaaagtatctttcaacattaaacaacttccaataaaa 1103543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 415 - 578
Target Start/End: Original strand, 41790645 - 41790809
Alignment:
Q  415 ttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaaca 514  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||    
T  41790645 ttttcaaaattccataaatagaataaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaagca 41790744  T
Q  515 acttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||| |||||||||| ||||||||| ||||||||| ||||||||||| |||||||||    
T  41790745 acttccaataaatccttggcacatggcctcaacaaaaatatctttaaagattaaaatcaacatca 41790809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 407 - 578
Target Start/End: Complemental strand, 15243263 - 15243090
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaa--atatcagttcattgcagcggaaagtatttttca 504  Q
    ||||||||| |||||||||||||||||||||| || ||| |||||||   | ||  |||| ||||  ||||||   ||| |||||||||| |||||||||    
T  15243263 tacactgctattcaaaaatccataaatagaataaaatacaatttattcttaacagttttgttaaaccatatcaaa-catcgcagcggaaaatatttttca 15243165  T
Q  505 acgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  15243164 acgttaaacaacttccaataaatccttggcacatggcctcaacaaaaatatctttaaagattaaattcaacatca 15243090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 483 - 578
Target Start/End: Original strand, 10312834 - 10312930
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| ||||||||||| |||||||||    
T  10312834 ttgcagcggaaaatatctttcaacgttaaacaacttccaataaatccttggcacatggcctcaacaaaaatatctttaaagattaaaatcaacatca 10312930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 480 - 578
Target Start/End: Original strand, 27026962 - 27027061
Alignment:
Q  480 tcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaa-caaaatatctgtaaagattaaattcaacatca 578  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| |||  ||||||||| |||||||||||||||||||||    
T  27026962 tcatcgcagcggaaaatatttttcaacgttaaacaacttccaataaatccttggcacatggccccaataaaaatatctttaaagattaaattcaacatca 27027061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 483 - 578
Target Start/End: Original strand, 13742229 - 13742324
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||| | |||||||| |||||||||||||||||| ||||||||||| |||| ||||    
T  13742229 ttgcagcggaaaatatctttcaacgttaaataacttccaataaatctttggcacatggcctcaacaaaatatctttaaagattaaaatcaatatca 13742324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 483 - 578
Target Start/End: Original strand, 16358578 - 16358673
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||  |||||||||||||||||  ||| ||||||| |||| ||||    
T  16358578 ttgcagcggaaaatatctttcaacgttaaacaacttccaataaatccttggcacttggcctcaacaaaatatccttaatgattaaaatcaatatca 16358673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 480 - 578
Target Start/End: Original strand, 6510808 - 6510907
Alignment:
Q  480 tcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    |||| |||||||||| |||||||||||||||||||||| ||||||||  ||||||||| | ||||||| ||||||| | ||||||||||| |||||||||    
T  6510808 tcatcgcagcggaaaatatttttcaacgttaaacaactcccaataaattcttggcacatgacctcaacaaaaatatttttaaagattaaaatcaacatca 6510907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 336 - 453
Target Start/End: Original strand, 18220466 - 18220585
Alignment:
Q  336 aatgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-tgacgggcatgctacactgct-tttcaaaaatccataaat 433  Q
    ||||||||||||  ||  ||||||||||||||||||| | |||||||||||||| ||||   ||||||||||||||||||| |||||||| | |||||||    
T  18220466 aatgtaacacccttttaacccaacaacataaatataataataaatcagagtttatcaccaaaacgggcatgctacactgctatttcaaaatttcataaat 18220565  T
Q  434 agaatgaagtactatttatt 453  Q
    |||||  | |||||||||||    
T  18220566 agaatagaatactatttatt 18220585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 338 - 575
Target Start/End: Complemental strand, 16372632 - 16372395
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||  ||||||||  ||||||| |||  ||||||||||| | || |  ||||  ||| ||||||||| ||||||| | |||||||| ||    
T  16372632 tgtaacaccccgttaacccaacaaagtaaatattaaataaaatcagagttaatcaacaaacgga-atgttacactgctcttcaaaatttcataaataaaa 16372534  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatat--cagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggca 535  Q
    | || ||||||||||| | |  | | ||| ||||| ||  || ||||| |||||||||| ||||||| ||| ||||||||||||||||||| |  |||||    
T  16372533 taaaatactatttattcataatagcattggtaaaacataacaattcatcgcagcggaaaatattttttaacattaaacaacttccaataaatc--tggca 16372436  T
Q  536 cacggcctcaaca-aaatatctgtaaagattaaattcaaca 575  Q
    |  |||||||||| |||||||| ||| |||| ||| |||||    
T  16372435 cttggcctcaacataaatatctttaaggatttaatccaaca 16372395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 407 - 456
Target Start/End: Original strand, 13876992 - 13877041
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaaa 456  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||    
T  13876992 tacactgcttttcaaaaatccataaatagaataaaatactatttattaaa 13877041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 508 - 578
Target Start/End: Complemental strand, 21190677 - 21190605
Alignment:
Q  508 ttaaacaacttccaataa--aaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    ||||||||||||||| ||  || ||||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  21190677 ttaaacaacttccaacaacaaatcttggcacatggcctcaacaaaatatcttcaaagattaaattcaacatca 21190605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 472 - 578
Target Start/End: Original strand, 286193 - 286299
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |    
T  286193 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaat 286291  T
Q  571 caacatca 578  Q
    ||||||||    
T  286292 caacatca 286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 578
Target Start/End: Complemental strand, 47127804 - 47127698
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |    
T  47127804 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaat 47127706  T
Q  571 caacatca 578  Q
    ||| ||||    
T  47127705 caatatca 47127698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 407 - 455
Target Start/End: Original strand, 28916339 - 28916387
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaa 455  Q
    |||||||||||||||||||||||| ||||| | || |||||||||||||    
T  28916339 tacactgcttttcaaaaatccatagatagagtaaaatactatttattaa 28916387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 578
Target Start/End: Complemental strand, 10976984 - 10976878
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||| ||||| ||| ||||||| |    
T  10976984 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaattatctttaatgattaaaat 10976886  T
Q  571 caacatca 578  Q
    ||| ||||    
T  10976885 caatatca 10976878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 407 - 451
Target Start/End: Original strand, 13880408 - 13880452
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactattta 451  Q
    |||||| ||||||||||||||||||||||||| ||  ||||||||    
T  13880408 tacactacttttcaaaaatccataaatagaataaaacactattta 13880452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 233; Significance: 1e-128; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 338 - 578
Target Start/End: Complemental strand, 23340421 - 23340181
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23340421 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 23340322  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23340321 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcagaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 23340222  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23340221 cggcctcaacaaaatatctgtaaagattaaattcaacatca 23340181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 338 - 578
Target Start/End: Complemental strand, 21240352 - 21240112
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21240352 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 21240253  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21240252 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 21240153  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21240152 cggcctcaacaaaatatctgtaaagattaaattcaacatca 21240112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 337 - 578
Target Start/End: Complemental strand, 21242903 - 21242662
Alignment:
Q  337 atgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaataga 436  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21242903 atgtaacaccccgttttcccaacaatataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 21242804  T
Q  437 atgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcac 536  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21242803 ataaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcac 21242704  T
Q  537 acggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21242703 acggcctcaacaaaatatctgtaaagattaaattcaacatca 21242662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 338 - 578
Target Start/End: Original strand, 37378396 - 37378636
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37378396 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 37378495  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37378496 taaaatactatttattaaaatcaactttgattaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 37378595  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  37378596 cggcctcaacaaaatatcagtaaagattaaattcaacatca 37378636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 407 - 578
Target Start/End: Original strand, 31502523 - 31502695
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaac 506  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31502523 tacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaac 31502622  T
Q  507 gttaaaca-acttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
     |||||||  |||| |||||| |||| ||||  |||||||||||||||||| ||| ||||||| |||| ||||    
T  31502623 attaaacatccttcaaataaatccttagcacttggcctcaacaaaatatctttaatgattaaaatcaatatca 31502695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 407 - 578
Target Start/End: Original strand, 31505089 - 31505261
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaac 506  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31505089 tacactgcttttcaaaaatccataaatagaataaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaac 31505188  T
Q  507 gttaaaca-acttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
     |||||||  |||| |||||| |||| ||||  |||||||||||||||||| ||| ||||||| |||| ||||    
T  31505189 attaaacatccttcaaataaatccttagcacttggcctcaacaaaatatctttaatgattaaaatcaatatca 31505261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 480 - 578
Target Start/End: Complemental strand, 12628780 - 12628681
Alignment:
Q  480 tcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    |||| |||||||||| || |||||||||||||||||||||||||||| |||||||||| |||| |||| ||||||||| |||||||||||||||||||||    
T  12628780 tcatcgcagcggaaaatagttttcaacgttaaacaacttccaataaatccttggcacatggccccaacaaaaatatctttaaagattaaattcaacatca 12628681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 483 - 578
Target Start/End: Original strand, 44620047 - 44620142
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||  |||||||||||||||||  ||| ||||||| |||| ||||    
T  44620047 ttgcagcggaaaatatctttcaacgttaaacaacttccaataaatccttggcacttggcctcaacaaaatatccttaatgattaaaatcaatatca 44620142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 338 - 465
Target Start/End: Complemental strand, 21124733 - 21124604
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgct-tttcaaaaatccataaataga 436  Q
    ||||||||||||||  |||| ||| |||||||||| | |||||||||||||| ||||  ||||||||||||||||||| |||||||| | | ||||||||    
T  21124733 tgtaacaccccgttaacccagcaatataaatataataataaatcagagtttatcaccaaacgggcatgctacactgctatttcaaaatttcttaaataga 21124634  T
Q  437 atgaagtactatttattaaa-atcaacttt 465  Q
    || || ||||||||| |||| |||||||||    
T  21124633 ataaaatactatttaataaacatcaacttt 21124604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 338 - 493
Target Start/End: Original strand, 23147915 - 23148072
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaag---taaatcagagtttaacacctga-cgggcatgctacactgcttttcaaaaatccataaat 433  Q
    |||||||||||||| |||||||||| ||||||| |||    |||||||||||| |||| |  | |||| |||  ||||| |||||||||| | | |||||    
T  23147915 tgtaacaccccgttatcccaacaac-taaatattaaataaataaatcagagttcaacaacaaaacgggaatgtcacactacttttcaaaatttcttaaat 23148013  T
Q  434 agaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaa 493  Q
    ||||| ||||||||||||||||| |||||||||||||||||||| | |||||||||||||    
T  23148014 agaataaagtactatttattaaa-tcaactttgataaaatatcaatacattgcagcggaa 23148072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 338 - 493
Target Start/End: Original strand, 23559705 - 23559862
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaag---taaatcagagtttaacacctga-cgggcatgctacactgcttttcaaaaatccataaat 433  Q
    |||||||||||||| |||||||||| ||||||| |||    |||||||||||| |||| |  | |||| |||  ||||| |||||||||| | | |||||    
T  23559705 tgtaacaccccgttatcccaacaac-taaatattaaataaataaatcagagttcaacaacaaaacgggaatgtcacactacttttcaaaatttcttaaat 23559803  T
Q  434 agaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaa 493  Q
    ||||| ||||||||||||||||| |||||||||||||||||||| | |||||||||||||    
T  23559804 agaataaagtactatttattaaa-tcaactttgataaaatatcaatacattgcagcggaa 23559862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 510 - 578
Target Start/End: Complemental strand, 20592114 - 20592047
Alignment:
Q  510 aaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||| |||||||||    
T  20592114 aaacaacttccaataacaccttggcacatggcctcaacaaaatatcttgaaagattaaa-tcaacatca 20592047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 338 - 526
Target Start/End: Original strand, 23079226 - 23079414
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||  ||||||||| | ||||| |||  ||||||||||| | || |  ||||  |||  ||||| |||| |||||||||||||||||||    
T  23079226 tgtaacaccccgttaacccaacaacgtgaatattaaataaaatcagagttaatcaacaaacgga-atgtcacacttctttacaaaaatccataaatagaa 23079324  T
Q  438 tgaagtactatttatta-aaatcaactttgataaa--atatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaa 526  Q
    | || |||||||||||| | |  | ||||||||||  |||||| ||||| |||||||||| ||||||| ||| |||||||||||||||||||    
T  23079325 taaaatactatttattacataatatctttgataaaacatatcaattcatcgcagcggaaa-tattttt-aacattaaacaacttccaataaa 23079414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 24159672 - 24159761
Alignment:
Q  481 cattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||||||||||| |  | |||||| | ||||||||| |||||||  ||||||||| | |||||||||||||||| |||||||||||||    
T  24159672 cattgcagcggaaaattatattcaacatcaaacaactttcaataaattcttggcacatgacctcaacaaaatatctttaaagattaaatt 24159761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 455
Target Start/End: Complemental strand, 10041020 - 10040973
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaa 455  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||    
T  10041020 acactgcttttcaaaaatccataaatagaataaaatactatttattaa 10040973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 408 - 451
Target Start/End: Complemental strand, 20354103 - 20354060
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactattta 451  Q
    ||||||||||||||||||||||||||||||| || |||||||||    
T  20354103 acactgcttttcaaaaatccataaatagaataaaatactattta 20354060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 407 - 454
Target Start/End: Original strand, 22108743 - 22108790
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttatta 454  Q
    |||||||||||||||||||||||||||||| | || ||||||||||||    
T  22108743 tacactgcttttcaaaaatccataaatagattaaaatactatttatta 22108790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 578
Target Start/End: Complemental strand, 41685761 - 41685655
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |    
T  41685761 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaat 41685663  T
Q  571 caacatca 578  Q
    ||| ||||    
T  41685662 caatatca 41685655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 338 - 410
Target Start/End: Original strand, 17629829 - 17629902
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-tgacgggcatgctaca 410  Q
    ||||||||||||||  |||||||| |||||||||| | |||||||||||||| ||||   ||||||||||||||    
T  17629829 tgtaacaccccgttaacccaacaatataaatataataataaatcagagtttatcaccaaaacgggcatgctaca 17629902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 6479235 - 6479187
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaa 456  Q
    ||||| ||||||||||||||||||||||||| || ||||||| ||||||    
T  6479235 acactacttttcaaaaatccataaatagaataaaatactattcattaaa 6479187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 481 - 569
Target Start/End: Original strand, 25650615 - 25650702
Alignment:
Q  481 cattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaat 569  Q
    |||||||||||||| |  | || ||| ||||||||||||||| ||  | |||||||| |||||||||||||||||| | ||||||||||    
T  25650615 cattgcagcggaaaattatcttaaacattaaacaacttccaacaattc-ttggcacatggcctcaacaaaatatctttgaagattaaat 25650702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 338 - 438
Target Start/End: Original strand, 31517590 - 31517689
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||| |||||||||||||||| |||||||| |||  ||||||||||| | || |  || || |||  |||||||||||||||||  |||||||||||    
T  31517590 tgtaacatcccgttttcccaacaatataaatattaaataaaatcagagttaatcaacaaac-ggaatgtcacactgcttttcaaaaaatcataaatagaa 31517688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 464
Target Start/End: Complemental strand, 24683378 - 24683311
Alignment:
Q  397 acgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactt 464  Q
    |||||||||  |||||||||||||||| | | ||||||||||  | |||||||||||||| |||||||    
T  24683378 acgggcatgtcacactgcttttcaaaatttcttaaatagaatataatactatttattaaattcaactt 24683311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 456
Target Start/End: Original strand, 23084754 - 23084803
Alignment:
Q  408 acactgcttttcaaaa-atccataaatagaatgaagtactatttattaaa 456  Q
    |||| ||||||||||| ||||||||||||||| || ||||||||||||||    
T  23084754 acacagcttttcaaaaaatccataaatagaataaaatactatttattaaa 23084803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Original strand, 22073162 - 22073258
Alignment:
Q  66 atttctggccaattaggattgcaagtgaatgtgataaagatgtctgggaaaccaacattgctagatatagccataccattaaaatagagctgatcca 162  Q
    ||||||||||| || || ||||| |||||||| ||||| || ||||| ||||||||    || ||||||||||| |||| ||| || ||||||||||    
T  22073162 atttctggccagtttgggttgcatgtgaatgtaataaaaatatctggaaaaccaaccacacttgatatagccattccatcaaagtaaagctgatcca 22073258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 338 - 578
Target Start/End: Complemental strand, 9863282 - 9863042
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9863282 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 9863183  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9863182 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 9863083  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9863082 cggcctcaacaaaatatctgtaaagattaaattcaacatca 9863042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 338 - 578
Target Start/End: Complemental strand, 17506962 - 17506722
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17506962 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 17506863  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17506862 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 17506763  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17506762 cggcctcaacaaaatatctgtaaagattaaattcaacatca 17506722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 338 - 578
Target Start/End: Original strand, 17546252 - 17546492
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17546252 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 17546351  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17546352 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 17546451  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17546452 cggcctcaacaaaatatctgtaaagattaaattcaacatca 17546492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 339 - 578
Target Start/End: Complemental strand, 13396710 - 13396471
Alignment:
Q  339 gtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaat 438  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13396710 gtaacaccccgtttttccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaat 13396611  T
Q  439 gaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacac 538  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13396610 aaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcacac 13396511  T
Q  539 ggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13396510 ggcctcaacaaaatatctgtaaagattaaattcaacatca 13396471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 336 - 578
Target Start/End: Original strand, 41283003 - 41283245
Alignment:
Q  336 aatgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatag 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41283003 aatgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatag 41283102  T
Q  436 aatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggca 535  Q
    ||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41283103 aataaaatactatttattaaaatcaactttgattaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggca 41283202  T
Q  536 cacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  41283203 cacggcctcaacaaaatatcagtaaagattaaattcaacatca 41283245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 338 - 578
Target Start/End: Complemental strand, 38413989 - 38413749
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  38413989 tgtaacaccccgttttcccaacatcataaatatcaaagtaaatcagagtttaacacctaacgggcatgctacactacttttcaaaaatacataaatagaa 38413890  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38413889 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 38413790  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38413789 cggcctcaacaaaatatctgtaaagattaaattcaacatca 38413749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 335 - 578
Target Start/End: Complemental strand, 1501557 - 1501315
Alignment:
Q  335 aaatgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaata 434  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  1501557 aaatgtaacaccccgttttcccaacaacataaatataaaattaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaattcataaata 1501458  T
Q  435 gaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggc 534  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| ||||||||||    
T  1501457 gaataaagtactatttattaaaatcaactttgataaaatatcagttcattgtagtggaaagtatttttcaacattaaacaacttccaat-aaaccttggc 1501359  T
Q  535 acacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1501358 acacggcctcaacaaaatatctgtaaagattaaattcaacatca 1501315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 335 - 564
Target Start/End: Complemental strand, 13734682 - 13734453
Alignment:
Q  335 aaatgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaata 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13734682 aaatgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaata 13734583  T
Q  435 gaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgtt-aaacaacttccaataaaaccttgg 533  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || ||||||    
T  13734582 gaataaagtactatttattaaattcaactttgataaaatatcagttcattgcagcggaaagtatttttcaatgttaaaacaacttccaat-aacccttgg 13734484  T
Q  534 cacacggcctcaacaaaatatctgtaaagat 564  Q
    |||| |||||||||||||||||| |||||||    
T  13734483 cacatggcctcaacaaaatatctttaaagat 13734453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 338 - 505
Target Start/End: Original strand, 17065004 - 17065172
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaat---cagagtttaacac-ctgacgggcatgctacactgcttttcaaaaatccataaat 433  Q
    |||||||||||||| |||||||||| ||||||| |||  ||||   ||||||| ||||  |  |||||||||  |||||||||||||||| | | |||||    
T  17065004 tgtaacaccccgttatcccaacaac-taaatattaaataaaataatcagagttcaacaaacaaacgggcatgtcacactgcttttcaaaatttcttaaat 17065102  T
Q  434 agaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaa 505  Q
     |||| || |||||||||||||||||||| |||||||||||||| | | |||||||||||  ||||||||||    
T  17065103 cgaataaaatactatttattaaaatcaaccttgataaaatatcaatactttgcagcggaa--tatttttcaa 17065172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 338 - 465
Target Start/End: Complemental strand, 14266800 - 14266671
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-tgacgggcatgctacactgcttttcaaaaatccataaataga 436  Q
    ||||||||||||||  |||||||| |||||||||| | |||||||||||||  ||||   ||||||||||||||||||| ||  ||||| | ||||||||    
T  14266800 tgtaacaccccgttaacccaacaatataaatataataataaatcagagtttgtcaccaaaacgggcatgctacactgctatttcaaaattcttaaataga 14266701  T
Q  437 atgaagtactatttattaaa-atcaacttt 465  Q
    || || ||||||||| |||| |||||||||    
T  14266700 ataaaatactatttaataaacatcaacttt 14266671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 337 - 578
Target Start/End: Original strand, 15724743 - 15724981
Alignment:
Q  337 atgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaataga 436  Q
    |||||||||||||||  ||||||||| ||||||| |||  ||||||||||| | || || ||||  |||  ||||| |||||||||||| ||||||||||    
T  15724743 atgtaacaccccgttaacccaacaacgtaaatattaaataaaatcagagttaatcaactaacgga-atgtcacactacttttcaaaaattcataaataga 15724841  T
Q  437 atgaagtactatttattaaaat-caactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggca 535  Q
    ||||| | ||||||||| || | ||||  | |||| |  | | | |||||||||||||| |  |||| ||| ||||||||| ||||||||| |  |||||    
T  15724842 atgaaatgctatttattcaacttcaacaat-ataacaact-attacattgcagcggaaaattatttttaacattaaacaacctccaataaatc--tggca 15724937  T
Q  536 cacggcctcaaca-aaatatctgtaaagattaaattcaacatca 578  Q
    || |||||||||| |||||||| ||||||||||||  |||||||    
T  15724938 catggcctcaacataaatatctttaaagattaaatctaacatca 15724981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 483 - 566
Target Start/End: Complemental strand, 16929702 - 16929619
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaa-caacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagatta 566  Q
    |||||||||||| ||| |||||| |||||| |||||||||||||  |||||||||| |||||||||||||||||| |||||||||    
T  16929702 ttgcagcggaaaatatctttcaatgttaaaacaacttccaataac-ccttggcacatggcctcaacaaaatatctttaaagatta 16929619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 510 - 570
Target Start/End: Complemental strand, 39996466 - 39996406
Alignment:
Q  510 aaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||| |||||||||||||    
T  39996466 aaacaacttccaataaattcttggcacatggcctcaacaaaatatctttaaagattaaatt 39996406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 486 - 566
Target Start/End: Complemental strand, 16928608 - 16928528
Alignment:
Q  486 cagcggaaagtatttttcaacgttaaa-caacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagatta 566  Q
    ||||||||| ||| |||||| |||||| |||||||||||||  |||||||||| |||||||||||||||||| |||||||||    
T  16928608 cagcggaaaatatctttcaatgttaaaacaacttccaataac-ccttggcacatggcctcaacaaaatatctttaaagatta 16928528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 338 - 575
Target Start/End: Complemental strand, 7508421 - 7508185
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||  ||||||||| ||||||| |||  ||||||||||| | || |  ||||  |||  ||||||||||| |||||| ||||||| |||    
T  7508421 tgtaacaccccgttaacccaacaacgtaaatattaaataaaatcagagttaatcaacaaacgga-atgtcacactgctttttaaaaattcataaatggaa 7508323  T
Q  438 tgaagtactatttattaaa-atcaactttgataaa--atatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggc 534  Q
    | || |  ||||||||||| |  | ||||| ||||  |||||| ||||| |||||||||  |  |||||||| ||||||||||||||||||| |  ||||    
T  7508322 taaaatgttatttattaaataatagctttggtaaaccatatcaattcatcgcagcggaa--ttattttcaacattaaacaacttccaataaatc--tggc 7508227  T
Q  535 acacggcctcaacaaaat-atctgtaaagattaaattcaaca 575  Q
    ||| |||||||||| ||| || |||||||||| ||| |||||    
T  7508226 acatggcctcaacataatcatttgtaaagatttaatccaaca 7508185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 338 - 465
Target Start/End: Complemental strand, 14256591 - 14256462
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctga-cgggcatgctacactgcttttcaaaaatccataaataga 436  Q
    ||||||||||||||  ||||| || |||||||||| | ||||| |||||||  ||||  | |||||||||||||||||| ||  ||||| | ||||||||    
T  14256591 tgtaacaccccgttaacccaataatataaatataataataaataagagtttgtcaccaaaacgggcatgctacactgctatttcaaaattcttaaataga 14256492  T
Q  437 atgaagtactatttattaaa-atcaacttt 465  Q
    || || ||||||||| |||| |||||||||    
T  14256491 ataaaatactatttaataaacatcaacttt 14256462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 408 - 456
Target Start/End: Original strand, 13773179 - 13773227
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaa 456  Q
    ||||||||||||||||||||||||||||||| || || |||||||||||    
T  13773179 acactgcttttcaaaaatccataaatagaataaaatattatttattaaa 13773227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 578
Target Start/End: Original strand, 48784299 - 48784405
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |    
T  48784299 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaat 48784397  T
Q  571 caacatca 578  Q
    ||| ||||    
T  48784398 caatatca 48784405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 338 - 394
Target Start/End: Original strand, 13407114 - 13407170
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc 394  Q
    ||||||||||||||  ||||| ||||||||||||| | |||||||||||||| ||||    
T  13407114 tgtaacaccccgttaacccaataacataaatataataataaatcagagtttatcacc 13407170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 454
Target Start/End: Complemental strand, 15732500 - 15732460
Alignment:
Q  414 cttttcaaaaatccataaatagaatgaagtactatttatta 454  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  15732500 cttttcaaaaatccataaatagaataaaatactatttatta 15732460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 16669302 - 16669234
Alignment:
Q  397 acgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaacttt 465  Q
    |||||||||  |||||||||||||||| |   |||||||||| || | |||||||||||||||||||||    
T  16669302 acgggcatgtcacactgcttttcaaaattttttaaatagaataaaattctatttattaaaatcaacttt 16669234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 17643670 - 17643602
Alignment:
Q  397 acgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaacttt 465  Q
    |||||||||  |||||||||||||||| |   |||||||||| || | |||||||||||||||||||||    
T  17643670 acgggcatgtcacactgcttttcaaaattttttaaatagaataaaattctatttattaaaatcaacttt 17643602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 462
Target Start/End: Original strand, 23441654 - 23441738
Alignment:
Q  378 aatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaac 462  Q
    |||||||||| ||||   ||||||||||  ||||||||||||||||||   ||||||||||  |  |||||||||||||||||||    
T  23441654 aatcagagttcaacaaacgacgggcatgtcacactgcttttcaaaaatttttaaatagaatataaaactatttattaaaatcaac 23441738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 455
Target Start/End: Complemental strand, 10629205 - 10629158
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaa 455  Q
    ||||| ||||||||||||||||||||||||| || || ||||||||||    
T  10629205 acactacttttcaaaaatccataaatagaataaaatattatttattaa 10629158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 455
Target Start/End: Complemental strand, 10638900 - 10638853
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaa 455  Q
    ||||| ||||||||||||||||||||||||| || || ||||||||||    
T  10638900 acactacttttcaaaaatccataaatagaataaaatattatttattaa 10638853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 436
Target Start/End: Complemental strand, 21736232 - 21736132
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-tgacgggcatgctacactgct-tttcaaaaatccataaatag 435  Q
    ||||||||||||||  ||||||| ||||||||||  | ||||||| |||||| ||||   |||||| |||||||||||| ||||| || | |||||||||    
T  21736232 tgtaacaccccgttaacccaacatcataaatatattaataaatcaaagtttatcaccaaaacgggcctgctacactgctatttcacaatttcataaatag 21736133  T
Q  436 a 436  Q
    |    
T  21736132 a 21736132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 39996565 - 39996521
Alignment:
Q  409 cactgcttttcaaaaatccataaatagaatgaagtactatttatt 453  Q
    ||||||||||||||||| |||||||||||| || | |||||||||    
T  39996565 cactgcttttcaaaaattcataaatagaataaaatgctatttatt 39996521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 338 - 578
Target Start/End: Original strand, 22586104 - 22586344
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22586104 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaatatccataaatagaa 22586203  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22586204 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcagaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 22586303  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22586304 cggcctcaacaaaatatctgtaaagattaaattcaacatca 22586344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 338 - 578
Target Start/End: Original strand, 22590935 - 22591175
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22590935 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 22591034  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  22591035 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcagaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 22591134  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22591135 cggcctcaacaaaatatctgtaaagattaaattcaacatca 22591175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 338 - 578
Target Start/End: Complemental strand, 2289090 - 2288850
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2289090 tgtaataccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 2288991  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2288990 taaagtactatttattaaaatcaactttgataaaatatcagttcattgtagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 2288891  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  2288890 cggcctcaacaaaatatctgtaaagattaaattcaacatca 2288850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 338 - 578
Target Start/End: Original strand, 8521806 - 8522046
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || | |||| |||||||||||||||||||||||||||||||    
T  8521806 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacatcttactgtcatgttacactgcttttcaaaaatccataaatagaa 8521905  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  8521906 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaactttggcaca 8522005  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8522006 cggcctcaacaaaatatctgtaaagattaaattcaacatca 8522046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 337 - 578
Target Start/End: Complemental strand, 15687375 - 15687134
Alignment:
Q  337 atgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaataga 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  15687375 atgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggtatgctacactgcttttcaaaaatccataaataga 15687276  T
Q  437 atgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcac 536  Q
    || || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  15687275 ataaaatactaattattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaacttggcac 15687176  T
Q  537 acggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||  | |||||||||||||||||||||||||||||    
T  15687175 acggcctcattagaatatctgtaaagattaaattcaacatca 15687134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 338 - 412
Target Start/End: Original strand, 25803823 - 25803897
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacact 412  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  25803823 tgtaacaccccgttttcccaacatcataaatatcaaagtaaatcagagtttaacacctaacgggcatgctacact 25803897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 338 - 569
Target Start/End: Original strand, 1638390 - 1638620
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||  ||||||||| ||||||| |||  ||||||||||| | || |  ||||  |||  ||||| ||||||||||||||||||||||||    
T  1638390 tgtaacaccccgttaacccaacaacgtaaatattaaataaaatcagagttaatcaacaaacgga-atgtcacacttcttttcaaaaatccataaatagaa 1638488  T
Q  438 tgaagtactatttattaaa-atcaactttgataaaa--tatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggc 534  Q
    | || |||||||||||| | |  | ||||||||| |  ||||| ||||| |||||||||| |||||| |||| ||||||||||||||||||| |  ||||    
T  1638489 taaaatactatttattacataatatctttgataagacatatcaattcatcgcagcggaaa-tatttt-caacattaaacaacttccaataaatc--tggc 1638584  T
Q  535 acacggcctcaaca-aaatatctgtaaagattaaat 569  Q
    ||| |||||||||| |||||||| ||||||||||||    
T  1638585 acaaggcctcaacataaatatctctaaagattaaat 1638620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 483 - 578
Target Start/End: Complemental strand, 8717825 - 8717730
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||| ||| |||||||||||||| ||||| |||||| | |||||||| |||||||||||||||||| ||||||||||| |||| ||||    
T  8717825 ttgcagcggaaaatatctttcaacgttaaactacttctaataaatctttggcacatggcctcaacaaaatatctttaaagattaaaatcaatatca 8717730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 338 - 569
Target Start/End: Original strand, 1641417 - 1641647
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||  ||||||||| ||||||| |||  ||||||||||| | || |  || |  |||  ||||| ||||||||||||||||||||||||    
T  1641417 tgtaacaccccgttaacccaacaacgtaaatattaaataaaatcagagttaatcaacaaacaga-atgtcacacttcttttcaaaaatccataaatagaa 1641515  T
Q  438 tgaagtactatttattaaa-atcaactttgataaaa--tatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggc 534  Q
    | || |||||||||||| | |  | ||||||||| |  ||||| ||||| |||||||||| |||||| || | |||||||||||||||||||   |||||    
T  1641516 taaaatactatttattacataatatctttgataagacatatcaattcatcgcagcggaaa-tatttt-caccattaaacaacttccaataaa--tttggc 1641611  T
Q  535 acacggcctcaaca-aaatatctgtaaagattaaat 569  Q
    ||| |||||||||| |||||||| ||||||||||||    
T  1641612 acaaggcctcaacataaatatctctaaagattaaat 1641647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 338 - 578
Target Start/End: Original strand, 17525673 - 17525909
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||  ||||||||| ||| ||| ||  |||||||||||| | || || ||||  |||  |||||||||||||||||| |||||||||||    
T  17525673 tgtaacaccccgttaacccaacaacgtaattattaat-taaatcagagttaatcaactaacgga-atgtcacactgcttttcaaaaattcataaatagaa 17525770  T
Q  438 tgaagtactatttattaaaat-caactttgataaaa-tatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggca 535  Q
    | || | ||||||||| || | ||||  | |||||| ||| |   |||||||||||||| |  | |||||| | |||| ||||||||||||  |||||||    
T  17525771 taaaatgctatttatttaacttcaacaat-ataaaactatta---cattgcagcggaaaattatattcaacatcaaactacttccaataaattcttggca 17525866  T
Q  536 cacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    || |||||||||||||||||| ||||||||||||| |||||||    
T  17525867 catggcctcaacaaaatatctttaaagattaaatttaacatca 17525909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 485 - 578
Target Start/End: Original strand, 15538306 - 15538399
Alignment:
Q  485 gcagcggaaagtatttttcaacgttaaa-caacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||| ||| |||||| |||||| |||||||| |||| ||||||||||| |||||||||||||||||| ||||||||||| |||||||||    
T  15538306 gcagcggaaaatatctttcaatgttaaaacaacttccgataacaccttggcacatggcctcaacaaaatatctttaaagattaaa-tcaacatca 15538399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 337 - 578
Target Start/End: Complemental strand, 1591422 - 1591184
Alignment:
Q  337 atgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaataga 436  Q
    |||||||||||||||  ||||||||| ||||||| |||  ||||||||||| | || || ||||  |||  ||||| |||||||||||| ||||||||||    
T  1591422 atgtaacaccccgttaacccaacaacgtaaatattaaataaaatcagagttaatcaactaacgga-atgtcacactacttttcaaaaattcataaataga 1591324  T
Q  437 atgaagtactatttattaaaat-caactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggca 535  Q
    ||||| | ||||||||| || | ||||  | |||| |  | | | |||||||||||||| |  |||| ||| ||||||||| ||||||||| |  |||||    
T  1591323 atgaaatgctatttattcaacttcaacaat-ataacaact-attacattgcagcggaaaattatttttaacattaaacaacctccaataaatc--tggca 1591228  T
Q  536 cacggcctcaaca-aaatatctgtaaagattaaattcaacatca 578  Q
    || |||||||||| |||||||| ||||||||||||  |||||||    
T  1591227 catggcctcaacataaatatctttaaagattaaatctaacatca 1591184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 16804088 - 16804170
Alignment:
Q  486 cagcggaaagtatttttcaacgttaaa-caacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaa 568  Q
    ||||||||| ||| |||||| |||||| |||||||||||||  |||||||||| |||||||||||||||||| |||||||||||    
T  16804088 cagcggaaaatatctttcaatgttaaaacaacttccaataac-ccttggcacatggcctcaacaaaatatctttaaagattaaa 16804170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 482 - 564
Target Start/End: Original strand, 29491871 - 29491953
Alignment:
Q  482 attgcagcggaaagtatttttcaacgttaaa-caacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagat 564  Q
    ||||||||||||| ||| |||||| |||||| |||||||||||||  |||||||||| |||||||||||||||||| |||||||    
T  29491871 attgcagcggaaaatatctttcaatgttaaaacaacttccaataac-ccttggcacatggcctcaacaaaatatctttaaagat 29491953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 338 - 465
Target Start/End: Original strand, 35243914 - 35244044
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-tgacgggcatgctacactgct-tttcaaaaatccataaatag 435  Q
    ||||||||||||||  |||||||| |||||||||| | ||||||||||| || ||||   ||||||||||||||||||| || ||||| | | |||||||    
T  35243914 tgtaacaccccgttaacccaacaatataaatataataataaatcagagtgtatcaccaaaacgggcatgctacactgctattccaaaatttcttaaatag 35244013  T
Q  436 aatgaagtactatttattaaa-atcaacttt 465  Q
    ||| || ||||||||| |||| |||||||||    
T  35244014 aataaaatactatttaataaacatcaacttt 35244044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 16828954 - 16829036
Alignment:
Q  486 cagcggaaagtatttttcaacgttaaa-caacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaa 568  Q
    ||||||||| ||| |||||| |||||| |||||||| ||||  |||||||||| |||||||||||||||||| |||||||||||    
T  16828954 cagcggaaaatatctttcaatgttaaaacaacttcctataac-ccttggcacatggcctcaacaaaatatctttaaagattaaa 16829036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 378 - 464
Target Start/End: Original strand, 29264867 - 29264952
Alignment:
Q  378 aatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactt 464  Q
    |||||||||| |||| |  |||||||||  |||||||||||||||| | | |||||||||| || ||||||||||||||||||||||    
T  29264867 aatcagagttcaacaacaaacgggcatgtcacactgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaactt 29264952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 407 - 456
Target Start/End: Complemental strand, 23622143 - 23622094
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaaa 456  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  23622143 tacactgcttttcaaaaatccataaatagaataatatactatttattaaa 23622094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 578
Target Start/End: Original strand, 16101445 - 16101551
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |    
T  16101445 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaat 16101543  T
Q  571 caacatca 578  Q
    ||| ||||    
T  16101544 caatatca 16101551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 336 - 471
Target Start/End: Complemental strand, 16886476 - 16886340
Alignment:
Q  336 aatgtaacaccccgttttcccaacaacataaatataaaag----taaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataa 431  Q
    |||||||||||||||| |||||||||  ||||||| |||     |||||||||||| ||||    ||||| |||  |||||||||||||||||| | |||    
T  16886476 aatgtaacaccccgttatcccaacaag-taaatattaaataaaataaatcagagttcaacaataaacgggaatgtcacactgcttttcaaaaattcttaa 16886378  T
Q  432 atagaatgaagtactatttattaaaatcaactttgataaa 471  Q
    ||||||| || | |||||||||  ||||||||||||||||    
T  16886377 atagaataaaatgctatttatt--aatcaactttgataaa 16886340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 408 - 455
Target Start/End: Complemental strand, 19445177 - 19445130
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaa 455  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||    
T  19445177 acactacttttcaaaaatccataaatagaataaaatactatttattaa 19445130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 464
Target Start/End: Original strand, 21475685 - 21475770
Alignment:
Q  378 aatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactt 464  Q
    |||||||||| |||| |  |||||||||  |||||||||||||||| | | |||||||||| || | ||||||||||||||||||||    
T  21475685 aatcagagttcaacaacaaacgggcatgtcacactgcttttcaaaatttc-taaatagaataaaatgctatttattaaaatcaactt 21475770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 408 - 469
Target Start/End: Original strand, 18136885 - 18136946
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgata 469  Q
    |||||||||||||||| | | |||||||||| || | ||||| |||||||||||||||||||    
T  18136885 acactgcttttcaaaatttcttaaatagaataaaatgctattcattaaaatcaactttgata 18136946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 414 - 454
Target Start/End: Original strand, 1583661 - 1583701
Alignment:
Q  414 cttttcaaaaatccataaatagaatgaagtactatttatta 454  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  1583661 cttttcaaaaatccataaatagaataaaatactatttatta 1583701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 578
Target Start/End: Original strand, 12595088 - 12595168
Alignment:
Q  499 ttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |||| ||||    
T  12595088 ttttcaacattaaacatccttcaaataaatccttggcactaggcctcaacaaaatatctttaatgattaaaatcaatatca 12595168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 408 - 548
Target Start/End: Original strand, 24440296 - 24440436
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaa-atcaactttgataaa---atatcagttcattgcagcggaaagtatttttc 503  Q
    ||||| |||||||||||| |||||||||||| || | |||||||||||| |  ||||||| ||||   |||||| ||||| || ||||||  |  |||||    
T  24440296 acactacttttcaaaaattcataaatagaataaaatgctatttattaaataataactttggtaaaaacatatcaattcatcgccgcggaa--ttattttc 24440393  T
Q  504 aacgttaaacaacttccaataaaaccttggcacacggcctcaaca 548  Q
    ||| ||||||||||| ||||||| |  ||||||| ||||||||||    
T  24440394 aacattaaacaactttcaataaatc--tggcacatggcctcaaca 24440436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 455
Target Start/End: Complemental strand, 16134504 - 16134457
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaa 455  Q
    ||||| ||||||||||||||| ||||||||| || |||||||||||||    
T  16134504 acactacttttcaaaaatccaaaaatagaataaaatactatttattaa 16134457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 18316810 - 18316708
Alignment:
Q  338 tgtaacaccccgttttcccaa-caacataaatataaaagtaaatcagagtttaacacc-tgacgggcatgctacactgcttttcaaaaatccataaatag 435  Q
    ||||||||||||||  ||||| ||| |||||||||| | |||||||||||||| ||||   |||||||||  ||||| |||||||||| | | |||||||    
T  18316810 tgtaacaccccgttaacccaaacaatataaatataataataaatcagagtttatcaccaaaacgggcatgtcacactacttttcaaaatttcttaaatag 18316711  T
Q  436 aat 438  Q
    |||    
T  18316710 aat 18316708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 464
Target Start/End: Original strand, 21469084 - 21469169
Alignment:
Q  378 aatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactt 464  Q
    |||||||||| |||| |  |||| ||||  |||||||||||||||| | | |||||||||| || | ||||||||||||||||||||    
T  21469084 aatcagagttcaacaacaaacggacatgtcacactgcttttcaaaatttc-taaatagaataaaatgctatttattaaaatcaactt 21469169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 462
Target Start/End: Original strand, 25748899 - 25748983
Alignment:
Q  378 aatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaac 462  Q
    |||||||||| |||| |  |||||||||  |||||||| ||  |||||   |||||||||| || ||||||||||||||||||||    
T  25748899 aatcagagttcaacaacatacgggcatgtcacactgctatttcaaaatttttaaatagaataaaatactatttattaaaatcaac 25748983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 338 - 578
Target Start/End: Original strand, 53223643 - 53223883
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  53223643 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 53223742  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  53223743 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 53223842  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  53223843 cggcctcaacaaaatatctgtaaagattaaattcaacatca 53223883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 407 - 578
Target Start/End: Original strand, 19442964 - 19443134
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaa-tatcagttcattgcagcggaaagtatttttcaa 505  Q
    ||||||||||||||||| ||| ||| |||||| || | ||||||| |||   |||||||||||||| ||||| | ||| |||||||||| ||||||||||    
T  19442964 tacactgcttttcaaaattccttaa-tagaataaaatgctatttaataac--caactttgataaaaatatcaatacatcgcagcggaaaatatttttcaa 19443060  T
Q  506 cgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||| |||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||| |||||||||    
T  19443061 cgttaaactacttccaataaatcctaggcacacggcctcaacaaaaatatctttaaagattaaaatcaacatca 19443134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 480 - 578
Target Start/End: Original strand, 54045946 - 54046045
Alignment:
Q  480 tcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||| |||| ||||||||| |||||||||||||||||||||    
T  54045946 tcattgcagcggaaaatatttttcaacgttaaacaacttccaataaatccttggcacatagccccaacaaaaatatctttaaagattaaattcaacatca 54046045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 407 - 550
Target Start/End: Original strand, 19445217 - 19445358
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaa-tatcagttcattgcagcggaaagtatttttcaa 505  Q
    ||||||||||||||||| ||| ||| |||||| || | ||||||| |||   |||||||||||||| ||||| | ||| |||||||||| ||||||||||    
T  19445217 tacactgcttttcaaaattccttaa-tagaataaaatgctatttaataac--caactttgataaaaatatcaatacatcgcagcggaaaatatttttcaa 19445313  T
Q  506 cgttaaacaacttccaataaaaccttggcacacggcctcaacaaa 550  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  19445314 cgttaaactacttccaataaatccttggcacacggcctcaacaaa 19445358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 480 - 578
Target Start/End: Complemental strand, 15011094 - 15010995
Alignment:
Q  480 tcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    |||| |||||||||| |||||||||| |||||||||||||||||||| |||||||||| |||| |||| ||||||||| |||||||||||||||||||||    
T  15011094 tcatcgcagcggaaaatatttttcaaagttaaacaacttccaataaatccttggcacatggccccaacgaaaatatctttaaagattaaattcaacatca 15010995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 483 - 578
Target Start/End: Complemental strand, 14952536 - 14952440
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| |||| |||||| |||||||||    
T  14952536 ttgcagcggaaaatatctttcaacgttaaacaacttccaataaatccttggcacatggcctcaacaaaaatatctttaaaaattaaaatcaacatca 14952440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 480 - 578
Target Start/End: Complemental strand, 604623 - 604523
Alignment:
Q  480 tcattgcagcggaaag-tatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatc 577  Q
    |||| ||||||||||  ||||||||||||||||||||||| ||||||| |||||||||| |||| |||| ||||||||| ||||||||||||||||||||    
T  604623 tcatcgcagcggaaaaatatttttcaacgttaaacaactttcaataaatccttggcacatggccccaacaaaaatatctttaaagattaaattcaacatc 604524  T
Q  578 a 578  Q
    |    
T  604523 a 604523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 480 - 578
Target Start/End: Original strand, 7631390 - 7631489
Alignment:
Q  480 tcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||  ||  |||| ||||| ||| |||||||||||||||||||||    
T  7631390 tcatcgcagcggaaaatatttttcaacgttaaacaacttccaataaatccttggcacattgctccaactaaaatttctttaaagattaaattcaacatca 7631489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 483 - 578
Target Start/End: Original strand, 18957958 - 18958053
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||| ||| |||||||||||||||||||| |||||| |||||||||| |||||||||||||||||  |||||||| || |||| ||||    
T  18957958 ttgcagcggaaaatatctttcaacgttaaacaacttctaataaatccttggcacatggcctcaacaaaatatccttaaagattcaaatcaatatca 18958053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 483 - 578
Target Start/End: Original strand, 39229921 - 39230016
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||  |||||||||||||||||  ||| ||||||| |||| ||||    
T  39229921 ttgcagcggaaaatatctttcaacgttaaacaacttccaataaatccttggcacttggcctcaacaaaatatccttaatgattaaaatcaatatca 39230016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 485 - 578
Target Start/End: Complemental strand, 55293379 - 55293286
Alignment:
Q  485 gcagcggaaagtatttttcaacgttaaa-caacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||| ||| |||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||| || ||||||||||| |||||||||    
T  55293379 gcagcggaaaatatctttcaatgttaaaacaacttccaataacaccttggcacatggcctcaacaaaataactttaaagattaaa-tcaacatca 55293286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 376 - 477
Target Start/End: Complemental strand, 15012795 - 15012693
Alignment:
Q  376 taaatcagagtttaaca-cctgacgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaata 474  Q
    |||||||||||| |||| ||  ||||| |||  |||||||||||||||| | | |||||||||| || |||||||||||| |||||||||||||||||||    
T  15012795 taaatcagagttcaacagccaaacgggaatgtcacactgcttttcaaaatttcttaaatagaataaaatactatttattagaatcaactttgataaaata 15012696  T
Q  475 tca 477  Q
    |||    
T  15012695 tca 15012693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 485 - 578
Target Start/End: Original strand, 16798819 - 16798912
Alignment:
Q  485 gcagcggaaagtatttttcaacgttaaa-caacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||| ||| |||||| |||||| ||||||||||||| ||||||||||| | |||||||||| ||| | ||||||||||| |||||||||    
T  16798819 gcagcggaaaatatctttcaatgttaaaacaacttccaataacaccttggcacatgacctcaacaaattatatttaaagattaaa-tcaacatca 16798912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 338 - 505
Target Start/End: Original strand, 9224 - 9389
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaat---cagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaata 434  Q
    |||||||||||||| |||||||||  ||||||| |||  ||||   ||||||| |||| |  |||||||||  |||||||||||||||| | | ||||||    
T  9224 tgtaacaccccgttatcccaacaat-taaatattaaataaaataatcagagttcaacaacaaacgggcatgtcacactgcttttcaaaatttc-taaata 9321  T
Q  435 gaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaa 505  Q
    |||| || ||||||||| ||||| |||| |||||||||||||| | | ||||||| |||  ||||||||||    
T  9322 gaataaattactatttaataaaa-caaccttgataaaatatcattactttgcagcagaa--tatttttcaa 9389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 578
Target Start/End: Complemental strand, 2036040 - 2035934
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |    
T  2036040 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaat 2035942  T
Q  571 caacatca 578  Q
    ||| ||||    
T  2035941 caatatca 2035934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 578
Target Start/End: Complemental strand, 2039781 - 2039675
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |    
T  2039781 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaat 2039683  T
Q  571 caacatca 578  Q
    ||| ||||    
T  2039682 caatatca 2039675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 578
Target Start/End: Complemental strand, 2043522 - 2043416
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |    
T  2043522 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaat 2043424  T
Q  571 caacatca 578  Q
    ||| ||||    
T  2043423 caatatca 2043416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 578
Target Start/End: Original strand, 14040747 - 14040853
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |    
T  14040747 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaat 14040845  T
Q  571 caacatca 578  Q
    ||| ||||    
T  14040846 caatatca 14040853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 578
Target Start/End: Complemental strand, 21070501 - 21070395
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |    
T  21070501 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaat 21070403  T
Q  571 caacatca 578  Q
    ||| ||||    
T  21070402 caatatca 21070395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 578
Target Start/End: Original strand, 14037305 - 14037385
Alignment:
Q  499 ttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |||| ||||    
T  14037305 ttttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaatcaatatca 14037385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 12856703 - 12856646
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaacttt 465  Q
    |||||||||||||||| | | |||||||||| || | |||| ||||||||||||||||    
T  12856703 acactgcttttcaaaatttcttaaatagaataaaatgctatatattaaaatcaacttt 12856646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 456
Target Start/End: Original strand, 15231525 - 15231570
Alignment:
Q  411 ctgcttttcaaaaatccataaatagaatgaagtactatttattaaa 456  Q
    ||||||||||||||| |||||||||||| || | ||||||||||||    
T  15231525 ctgcttttcaaaaattcataaatagaataaaatgctatttattaaa 15231570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 456
Target Start/End: Original strand, 15237393 - 15237438
Alignment:
Q  411 ctgcttttcaaaaatccataaatagaatgaagtactatttattaaa 456  Q
    ||||||||||||||| |||||||||||| || | ||||||||||||    
T  15237393 ctgcttttcaaaaattcataaatagaataaaatgctatttattaaa 15237438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 21081996 - 21081939
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaacttt 465  Q
    |||||||||||||||| | | |||||||||| || | |||| ||||||||||||||||    
T  21081996 acactgcttttcaaaatttcttaaatagaataaaatgctatatattaaaatcaacttt 21081939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 42108502 - 42108553
Alignment:
Q  399 gggcatgctacactgcttttcaaaaatccataaatagaatgaagtactattta 451  Q
    ||||||||||||||||||||| ||||| | |||||||||| || |||||||||    
T  42108502 gggcatgctacactgcttttc-aaaattcttaaatagaataaaatactattta 42108553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 225; Significance: 1e-123; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 338 - 578
Target Start/End: Original strand, 7971 - 8211
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7971 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 8070  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8071 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 8170  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  8171 cggcctcaacaaaatatctgtaaagatcaaattcaacatca 8211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 337 - 578
Target Start/End: Original strand, 295470 - 295711
Alignment:
Q  337 atgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaataga 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  295470 atgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacagctgacgggcatgctacactgcttttcaaaaatccataaataga 295569  T
Q  437 atgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcac 536  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  295570 ataaagtactatttattaaaatcaactttgataaaatatcagttcattgctgcagaaagtatttttcaacgttaaacaacttccaataaaaccttggcac 295669  T
Q  537 acggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  295670 acagcctcaacaaaatatctgtaaagattaaattcaacatca 295711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 338 - 564
Target Start/End: Original strand, 37357508 - 37357734
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37357508 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 37357607  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgtt-aaacaacttccaataaaaccttggcac 536  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || |||||||||    
T  37357608 taaagtactatttattaaattcaactttgataaaatatcagttcattgcagcggaaagtatttttcaatgttaaaacaacttccaat-aacccttggcac 37357706  T
Q  537 acggcctcaacaaaatatctgtaaagat 564  Q
    | |||||||||||||||||| |||||||    
T  37357707 atggcctcaacaaaatatctttaaagat 37357734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 338 - 480
Target Start/End: Original strand, 21107889 - 21108031
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  21107889 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacataacgggcatgctacactgcttttcaaaaatccataaatagaa 21107988  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagtt 480  Q
    | |||||||||||||||||||||||||||||||||||||||||    
T  21107989 taaagtactatttattaaaatcaactttgataaaatatcagtt 21108031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 485 - 578
Target Start/End: Original strand, 24086614 - 24086708
Alignment:
Q  485 gcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| |||| ||||||||| |||||||||||||||||||||    
T  24086614 gcagcggaaaatatttttcaacgttaaacaacttccaataaatccttggcacatggccccaacaaaaatatctttaaagattaaattcaacatca 24086708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 483 - 578
Target Start/End: Complemental strand, 14433355 - 14433260
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||  |||||||||||||||||| ||| ||||||| |||| ||||    
T  14433355 ttgcagcggaaaatatctttcaacgttaaacaacttccaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaatcaatatca 14433260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 407 - 578
Target Start/End: Complemental strand, 21118847 - 21118673
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaatat--cagttcattgcagcggaaagtatttttca 504  Q
    |||| ||||||||||||||||||||||||||| || ||||||||||| | |  | | ||| ||||| ||  ||  |||| | |||| ||| |||||||||    
T  21118847 tacattgcttttcaaaaatccataaatagaataaaatactatttattcataatagccttgttaaaacataacaaatcatcgtagcgaaaaatatttttca 21118748  T
Q  505 acgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    || ||||||||||||||||||  |||||||||| ||||||||| ||||||||| ||||||||||||  |||||||    
T  21118747 acattaaacaacttccaataattccttggcacatggcctcaacaaaaatatctttaaagattaaatctaacatca 21118673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 483 - 578
Target Start/End: Original strand, 22071571 - 22071666
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||  |||||||||||||||||  ||| ||||||| |||| ||||    
T  22071571 ttgcagcggaaaatatctttcaacgttaaacaacttccaataaatccttggcacttggcctcaacaaaatatccttaatgattaaaatcaatatca 22071666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 337 - 526
Target Start/End: Original strand, 18822789 - 18822978
Alignment:
Q  337 atgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaataga 436  Q
    |||||||||||||||  ||||||||| ||||||| |||  ||||||||||| | || |  || |  |||  |||||||||||||||||| ||||||||||    
T  18822789 atgtaacaccccgttaacccaacaacgtaaatattaaataaaatcagagttaatcaacaaacaga-atgtcacactgcttttcaaaaattcataaataga 18822887  T
Q  437 atgaagtactatttattaaa-atcaactttgataaa--atatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaa 526  Q
    || || | |||||||||||| |  ||||||| ||||  |||||| ||||| |||||||||  |  |||||||| ||||||||||| |||||||    
T  18822888 ataaaatgctatttattaaataataactttggtaaaacatatcaattcatcgcagcggaa--ttattttcaacattaaacaactttcaataaa 18822978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 408 - 455
Target Start/End: Complemental strand, 13529743 - 13529696
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaa 455  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||    
T  13529743 acactacttttcaaaaatccataaatagaataaaatactatttattaa 13529696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 578
Target Start/End: Original strand, 36180704 - 36180810
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |    
T  36180704 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaat 36180802  T
Q  571 caacatca 578  Q
    ||| ||||    
T  36180803 caatatca 36180810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 465
Target Start/End: Complemental strand, 21987792 - 21987666
Alignment:
Q  341 aacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-tgacgggcatgctacactgcttttcaaaaatccataaatagaatg 439  Q
    |||||||||||  |||||||| |||||||||| | |||||||||||||| ||||   |||| ||||||||||| || ||  | ||| | ||||||||||     
T  21987792 aacaccccgttaacccaacaatataaatataataataaatcagagtttatcaccaaaacggacatgctacacttctatttcataattcttaaatagaata 21987693  T
Q  440 aagtactatttattaaa-atcaacttt 465  Q
    || ||||||||| |||| |||||||||    
T  21987692 aaatactatttaataaacatcaacttt 21987666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 407 - 456
Target Start/End: Original strand, 18251411 - 18251460
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaaa 456  Q
    |||||||||||||||||||||||||||||||| || ||  ||||||||||    
T  18251411 tacactgcttttcaaaaatccataaatagaataaaatatcatttattaaa 18251460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 407 - 456
Target Start/End: Original strand, 18269423 - 18269472
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaaa 456  Q
    |||||||||||||||||||||||||||||||| || ||  ||||||||||    
T  18269423 tacactgcttttcaaaaatccataaatagaataaaatatcatttattaaa 18269472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 407 - 456
Target Start/End: Original strand, 18274101 - 18274150
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaaa 456  Q
    |||||||||||||||||||||||||||||||| || ||  ||||||||||    
T  18274101 tacactgcttttcaaaaatccataaatagaataaaatatcatttattaaa 18274150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 578
Target Start/End: Original strand, 20630371 - 20630477
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||| ||||  |||||||||||||||||| ||| ||||||| |    
T  20630371 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatcctttgcacttggcctcaacaaaatatctttaatgattaaaat 20630469  T
Q  571 caacatca 578  Q
    ||| ||||    
T  20630470 caatatca 20630477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 376 - 438
Target Start/End: Complemental strand, 21738102 - 21738040
Alignment:
Q  376 taaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaat 438  Q
    |||||||||||||||||||  |||||||||  ||||| |||||||||| | | ||||||||||    
T  21738102 taaatcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaatagaat 21738040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 570
Target Start/End: Complemental strand, 21529476 - 21529412
Alignment:
Q  508 ttaaacaacttccaataa--aaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    ||||||||||||||| ||  || ||||||||| |||||||||||| |||||  ||||||||||||    
T  21529476 ttaaacaacttccaacaacaaatcttggcacatggcctcaacaaagtatcttcaaagattaaatt 21529412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 21529577 - 21529529
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaa 456  Q
    |||||||| ||||||||||| |||||||||| ||||  |||||||||||    
T  21529577 acactgctattcaaaaatccttaaatagaataaagtgttatttattaaa 21529529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 338 - 578
Target Start/End: Original strand, 17794278 - 17794518
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  17794278 tgtaacaccccgttttcccaacatcataaatatcaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaattcataaatagaa 17794377  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17794378 taaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 17794477  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17794478 cggcctcaacaaaatatctgtaaagattaaattcaacatca 17794518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 407 - 578
Target Start/End: Complemental strand, 21414299 - 21414126
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaa--tatcagttcattgcagcggaaagtatttttca 504  Q
    |||||||||||||||||||||||||||||||| || |||||||||||   | ||  |||| |||||  |||||   ||| ||||||||||||||||||||    
T  21414299 tacactgcttttcaaaaatccataaatagaataaaatactatttattcttaacagttttgttaaaacctatcaaa-catcgcagcggaaagtatttttca 21414201  T
Q  505 acgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  21414200 acgttaaacaacttccaataaaaccttggcacatggcatcaacaaaaatatctgtaaagattaaattcaacatca 21414126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 483 - 578
Target Start/End: Complemental strand, 22146426 - 22146331
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||| ||||||| |||| ||||    
T  22146426 ttgcagcagaaaatatctttcaacgttaaacaacttccaataaatccttggcacatggcctcaacaaaatatctttaatgattaaaatcaatatca 22146331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 338 - 548
Target Start/End: Complemental strand, 22435465 - 22435258
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||| ||||||||||||||||||  ||  ||||||||||| |||| |  |||   |||  |||||||||||||||||| |||||||||||    
T  22435465 tgtaacaccccgttatcccaacaacataaatatttaataaaatcagagttaaacaacaaacgaa-atgtcacactgcttttcaaaaattcataaatagaa 22435367  T
Q  438 tgaagtactatttattaaa-atcaactttgataaa--atatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggc 534  Q
    | || |||||||||||||| |  | ||||| ||||  |||||| ||||| |||||||||  || |||||||| ||||||||||||||||||| |  ||||    
T  22435366 taaaatactatttattaaataatagctttggtaaaacatatcaattcatcgcagcggaa--ta-ttttcaacattaaacaacttccaataaatc--tggc 22435272  T
Q  535 acacggcctcaaca 548  Q
    ||| ||||||||||    
T  22435271 acatggcctcaaca 22435258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 472 - 574
Target Start/End: Complemental strand, 21416236 - 21416134
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||| |||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||| ||||||||| |||| || |||||    
T  21416236 atatcaattcatcgcagcagaaa-tatttttcaacgttaaacaactttcaataaatccttggcacatggcctcaacaaaaatatctttaaatatgaaatt 21416138  T
Q  571 caac 574  Q
    ||||    
T  21416137 caac 21416134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 24708806 - 24708721
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaa-caacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaa 568  Q
    |||||||||||| ||| |||||| |||||| |||||||||||||  |||||||||| |||||||||||||||||| |||||||||||    
T  24708806 ttgcagcggaaaatatctttcaatgttaaaacaacttccaataac-ccttggcacatggcctcaacaaaatatctttaaagattaaa 24708721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 485 - 569
Target Start/End: Complemental strand, 44523881 - 44523796
Alignment:
Q  485 gcagcggaaagtatttttcaacgttaaa-caacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaat 569  Q
    |||||||||| ||| |||||| |||||| ||||| ||||||| |||||||||||  ||||||||||||||||| ||||||||||||    
T  44523881 gcagcggaaaatatctttcaatgttaaaacaactcccaataacaccttggcacatagcctcaacaaaatatctttaaagattaaat 44523796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 407 - 455
Target Start/End: Complemental strand, 15005603 - 15005555
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaa 455  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||    
T  15005603 tacactgcttttcaaaaatccataaatagaataaaatactatttattaa 15005555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 408 - 548
Target Start/End: Complemental strand, 17273477 - 17273338
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaa-atcaactttgataaa--atatcagttcattgcagcggaaagtatttttca 504  Q
    |||||||||||||||||| |||||||||||| || |  ||||||||||| |  ||||||| ||||  |||||| ||||| |||||||||  |  ||||||    
T  17273477 acactgcttttcaaaaattcataaatagaataaaatcatatttattaaataataactttggtaaaacatatcaattcatcgcagcggaa--ttattttca 17273380  T
Q  505 acgttaaacaacttccaataaaaccttggcacacggcctcaaca 548  Q
    || ||||||||||| |||||||   |||||||| ||||||||||    
T  17273379 acattaaacaactttcaataaa--tttggcacatggcctcaaca 17273338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 338 - 469
Target Start/End: Complemental strand, 22522692 - 22522558
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatata----aaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaat 433  Q
    |||||||||||||| |||||||| | |||||||     ||| |||||||||||| |||| |  ||||| |||  |||||||||||||||| | | |||||    
T  22522692 tgtaacaccccgttatcccaacagc-taaatattcaataaaataaatcagagttcaacaacaaacgggaatgtcacactgcttttcaaaatttcttaaat 22522594  T
Q  434 agaatgaagtactatttattaaaatcaactttgata 469  Q
    ||||| || |  ||||||||||||||||||||||||    
T  22522593 agaataaaatgttatttattaaaatcaactttgata 22522558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 338 - 456
Target Start/End: Original strand, 33087497 - 33087615
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||| ||||  |||||||| |||||||||| | |||||||||||||| ||||  ||||| |||  | ||| |||||||||| | | |||||||||    
T  33087497 tgtaacacctcgttaacccaacaatataaatataataataaatcagagtttatcaccaaacgggaatgtcatactacttttcaaaatttcttaaatagaa 33087596  T
Q  438 tgaagtactatttattaaa 456  Q
    | || ||||||||| ||||    
T  33087597 taaaatactatttaataaa 33087615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 397 - 493
Target Start/End: Complemental strand, 20021134 - 20021039
Alignment:
Q  397 acgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaa 493  Q
    |||||||||  |||||||||||||||| |   |||||||||| || ||||||||| ||||| |||| |||||||||||||| | | |||||||||||    
T  20021134 acgggcatgtcacactgcttttcaaaactttctaaatagaataaattactatttaataaaa-caaccttgataaaatatcaatactttgcagcggaa 20021039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 456
Target Start/End: Original strand, 20384475 - 20384594
Alignment:
Q  336 aatgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatag 435  Q
    ||||||||||||||||  ||||||||||||||||| |||  |||| |||||| | || |  ||||  |||  ||||||||||||||| || |||||||||    
T  20384475 aatgtaacaccccgttaacccaacaacataaatattaaataaaataagagttaatcaacaaacgga-atgtcacactgcttttcaaacattcataaatag 20384573  T
Q  436 aatgaagtactatttattaaa 456  Q
    ||| || | ||||||||||||    
T  20384574 aataaaatgctatttattaaa 20384594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 407 - 505
Target Start/End: Original strand, 32948955 - 32949051
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaa 505  Q
    ||||||| ||||||||| | | |||||||||| || |||||||||||||||||||| || |||||| |||| |   |||||||||||  ||||||||||    
T  32948955 tacactgtttttcaaaatttcttaaatagaataaaatactatttattaaaatcaacctttataaaacatcaataatttgcagcggaa--tatttttcaa 32949051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 465
Target Start/End: Complemental strand, 25625513 - 25625423
Alignment:
Q  376 taaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaa-atcaacttt 465  Q
    |||||||||||||||||||  |||||||||  ||||| |||||||||| | | ||||||||||  | ||||||||| |||| |||||||||    
T  25625513 taaatcagagtttaacaccaaacgggcatgtcacactacttttcaaaatttcttaaatagaatataatactatttaataaacatcaacttt 25625423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 397 - 505
Target Start/End: Original strand, 19986496 - 19986599
Alignment:
Q  397 acgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagt 496  Q
    |||||||||  |||||||||||| ||||||  |||||||||| || ||||||||| ||||| |||| |||||||||||||| | | |||||||||||  |    
T  19986496 acgggcatgtcacactgcttttc-aaaatctctaaatagaat-aaatactatttaataaaa-caaccttgataaaatatcaatactttgcagcggaa--t 19986590  T
Q  497 atttttcaa 505  Q
    |||||||||    
T  19986591 atttttcaa 19986599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 578
Target Start/End: Complemental strand, 22060403 - 22060323
Alignment:
Q  499 ttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |||| ||||    
T  22060403 ttttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaatcaatatca 22060323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 508 - 570
Target Start/End: Original strand, 22616096 - 22616158
Alignment:
Q  508 ttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    ||||||||| ||||| |||  ||||||||| |||||||||||| ||||| |||| ||||||||    
T  22616096 ttaaacaacgtccaacaaattcttggcacatggcctcaacaaattatctttaaaaattaaatt 22616158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 429 - 469
Target Start/End: Original strand, 15266572 - 15266612
Alignment:
Q  429 taaatagaatgaagtactatttattaaaatcaactttgata 469  Q
    |||||||||| || | |||||||||||||||||||||||||    
T  15266572 taaatagaataaaatgctatttattaaaatcaactttgata 15266612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 338 - 578
Target Start/End: Original strand, 43806 - 44046
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | ||| |||||||||||||||||||||||||||||||||||    
T  43806 tgtaacaccccgttttcccaacaacataaatataaaattaaatcagagtttaacatcttatgggtatgctacactgcttttcaaaaatccataaatagaa 43905  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43906 taaagtactacttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaactttcaataaaaccttggcaca 44005  T
Q  538 cggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  44006 cgacctcaacaaaatatctgtaaagattaaattcaacatca 44046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1885 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold1885
Description:

Target: scaffold1885; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 338 - 555
Target Start/End: Original strand, 1051 - 1268
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1051 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaatagaa 1150  T
Q  438 tgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcaca 537  Q
    | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1151 taaagtactatttattaaaatcaactttgacaaaatatcagttcattgcagcggaaagtatttttcaacattaaacaacttccaataaaaccttggcaca 1250  T
Q  538 cggcctcaacaaaatatc 555  Q
    ||||||||||||||||||    
T  1251 cggcctcaacaaaatatc 1268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 181; Significance: 2e-97; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 337 - 576
Target Start/End: Complemental strand, 143782 - 143543
Alignment:
Q  337 atgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaataga 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  143782 atgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 143683  T
Q  437 atgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgtt-aaacaacttccaataaaaccttggca 535  Q
    || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || ||||||||    
T  143682 ataaagtactatttattaatttcaactttgataaaatatcagttcattgcagcggaaagtatttttcaatgttaaaacaacttccaat-aacccttggca 143584  T
Q  536 cacggcctcaacaaaatatctgtaaagattaaattcaacat 576  Q
    || ||||||||| |||||||| ||||||| |||||| ||||    
T  143583 catggcctcaaccaaatatctttaaagataaaattccacat 143543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 337 - 564
Target Start/End: Complemental strand, 135074 - 134847
Alignment:
Q  337 atgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaataga 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  135074 atgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctaacgggcatgctacactgcttttcaaaaatccataaataga 134975  T
Q  437 atgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaacgtt-aaacaacttccaataaaaccttggca 535  Q
    || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || ||||||||    
T  134974 ataaagtactatttattaatttcaactttgataaaatatcagttcattgcagcggaaagtatttttcaatgttaaaacaacttccaat-aacccttggca 134876  T
Q  536 cacggcctcaacaaaatatctgtaaagat 564  Q
    || ||||||||| |||||||| |||||||    
T  134875 catggcctcaaccaaatatctttaaagat 134847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 177; Significance: 4e-95; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 17 - 337
Target Start/End: Original strand, 117222 - 117542
Alignment:
Q  17 atcaggtcgatcgtgaggtttcaaattatcctttaggagacacctttgaatttctggccaattaggattgcaagtgaatgtgataaagatgtctgggaaa 116  Q
    |||||| ||||| ||||| |||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||| ||||| || || || |||    
T  117222 atcaggacgatcatgaggcttcaaattatccttaaggacacacctttgaatttctggccagttaggattgcaagtgaatgttataaatatatccggaaaa 117321  T
Q  117 ccaacattgctagatatagccataccattaaaatagagctgatccaaatatcttcgacttccaacaaaggtagatggaagaacaatccgcttaccnnnnn 216  Q
    |||||||||||||||||||||||| ||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||         
T  117322 ccaacattgctagatatagccatatcatcaaaatacaactgatccaaatatcatcgacttccaacaaaggtagatggaagaacaatccgtttaccacttt 117421  T
Q  217 nnngttgagatgtctgtccatcagtggcagttttgttgctcaaccgatgatatttggaaactcttagttttgattggtttctcctcaaccaattgagtct 316  Q
       |||||||| | ||||||| | |  | | ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  117422 ttggttgagatatttgtccattattaactgatttgttgttcaaccgttgatatttggaaactcttagttttaattggtttctcctcaaccaattgagtct 117521  T
Q  317 ttctgcttcaatcattgtaaa 337  Q
    |||||| || |||||||||||    
T  117522 ttctgcctccatcattgtaaa 117542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 465
Target Start/End: Complemental strand, 93496 - 93409
Alignment:
Q  378 aatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaacttt 465  Q
    |||||||||| |||| |  |||| |||| ||||||||||||||||| | | |||||||| | || ||||||||| |||||||||||||    
T  93496 aatcagagttcaacaacaaacggacatgttacactgcttttcaaaatttcttaaatagagtaaaatactatttaataaaatcaacttt 93409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 407 - 578
Target Start/End: Original strand, 157909 - 158082
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaa--tatcagttcattgcagcggaaagtatttttca 504  Q
    |||||||||||||||||||||||||||||||| || |||||||||||   |  |  |||| |||||  |||||   ||| |||||||||| |||||||||    
T  157909 tacactgcttttcaaaaatccataaatagaataaaatactatttattcttaatagttttgttaaaacctatcaaa-catcgcagcggaaaatatttttca 158007  T
Q  505 acgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  158008 acgttaaacaacttccaataaaaccttggcacatggcctcaacaaaaatatatgtaaagattaaattcaacatca 158082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 472 - 574
Target Start/End: Original strand, 965 - 1067
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||| ||||||||| |||| || |||||    
T  965 atatcaattcatcgcagcggaaa-tatttttcaacgttaaacaactttcaataaatccttggcacatggcctcaacaaaaatatctttaaatatgaaatt 1063  T
Q  571 caac 574  Q
    ||||    
T  1064 caac 1067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 483 - 578
Target Start/End: Complemental strand, 22160 - 22065
Alignment:
Q  483 ttgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatca 578  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||  |||||||||||||||||  ||| ||||||| |||| ||||    
T  22160 ttgcagcggaaaatatctttcaacgttaaacaacttccaataaatccttggcacttggcctcaacaaaatatccttaatgattaaaatcaatatca 22065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 480 - 578
Target Start/End: Original strand, 9890 - 9989
Alignment:
Q  480 tcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||| | || ||||  ||||||||| ||||||||| ||||||||||| |||||||||    
T  9890 tcatcgcagcggacaatatttttcaacgttaaacaacttccaataaatctttcgcacctggcctcaacaaaaatatctttaaagattaaaatcaacatca 9989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 480 - 578
Target Start/End: Complemental strand, 6776 - 6678
Alignment:
Q  480 tcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaac-aaaatatctgtaaagattaaattcaacatca 578  Q
    |||| |||||||||| | ||||||||||||||||||||||||||||| | |||||||  ||||||||| ||||||||| ||||||||||| |||||||||    
T  6776 tcatcgcagcggaaa-tgtttttcaacgttaaacaacttccaataaatctttggcacttggcctcaacaaaaatatctttaaagattaaaatcaacatca 6678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 337 - 548
Target Start/End: Complemental strand, 954 - 745
Alignment:
Q  337 atgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaataga 436  Q
    |||||||||||||||  ||||||||| ||||||| |||  ||||||||||| | || |  ||||  |||  |||||||||||||||||| ||||||||||    
T  954 atgtaacaccccgttaacccaacaacgtaaatattaaataaaatcagagttaatcaacaaacgga-atgtcacactgcttttcaaaaattcataaataga 856  T
Q  437 atgaagtactatttattaaa-atcaactttgataaa--atatcagttcattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttgg 533  Q
    || || | |||||||||||| |  ||||||| ||||  |||||| ||||| |||||||||  |  |||||||| ||||||||||| ||||||| |  |||    
T  855 ataaaatgctatttattaaataataactttggtaaaacatatcaattcatcgcagcggaa--ttattttcaacattaaacaactttcaataaatc--tgg 760  T
Q  534 cacacggcctcaaca 548  Q
    |||| ||||||||||    
T  759 cacatggcctcaaca 745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 3917 - 3828
Alignment:
Q  481 cattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||||||||||| |  | |||||| | |||||||||||||||||  ||||||||| |||||||||||||||||| |||||||||||||    
T  3917 cattgcagcggaaaattatattcaacatcaaacaacttccaataaattcttggcacatggcctcaacaaaatatctttaaagattaaatt 3828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 408 - 458
Target Start/End: Original strand, 13221 - 13271
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaaat 458  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  13221 acactgcttttcaaaaatccataaatagaataaaatactatttattaaaat 13271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 408 - 458
Target Start/End: Original strand, 11216 - 11266
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaaat 458  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  11216 acactgcttttcaaaaatccataaatagaataaaatactatttattaaaat 11266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 376 - 438
Target Start/End: Original strand, 12098 - 12160
Alignment:
Q  376 taaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaat 438  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| | | ||||||||||    
T  12098 taaatcagagtttaacaccaaacgggcatgctacactgcttttcaaaatttcttaaatagaat 12160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 581
Target Start/End: Complemental strand, 3441 - 3361
Alignment:
Q  499 ttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaacatcatca 581  Q
    |||| ||| ||||||||||||||| ||  | |||||||| |||||||||||||||| | | ||||||||| ||||||||||||    
T  3441 ttttaaacattaaacaacttccaacaattc-ttggcacatggcctcaacaaaatatttttgaagattaaa-tcaacatcatca 3361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 408 - 490
Target Start/End: Original strand, 52931 - 53011
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcg 490  Q
    |||||||||||||||| | | |||||||||| |||||||||||||| ||||||||||||||||||||||| | || |||||||    
T  52931 acactgcttttcaaaattgc-taaatagaataaagtactatttatt-aaatcaactttgataaaatatcaatacactgcagcg 53011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1336 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 397 - 505
Target Start/End: Complemental strand, 1561 - 1455
Alignment:
Q  397 acgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagt 496  Q
    |||||||||  |||||||||||||||| | | |||||||||| || |||||||||||||||||||| || ||||||| | | | | |||||||||||  |    
T  1561 acgggcatgtcacactgcttttcaaaatttcttaaatagaataaaatactatttattaaaatcaacctttataaaattttaatactttgcagcggaa--t 1464  T
Q  497 atttttcaa 505  Q
    |||||||||    
T  1463 atttttcaa 1455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 570
Target Start/End: Complemental strand, 33014 - 32925
Alignment:
Q  481 cattgcagcggaaagtatttttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||||||||||| |  | || ||| ||||||||||||||| |||  ||||||||| |||||||||||| ||||| |||||||||||||    
T  33014 cattgcagcggaaaattatcttaaacattaaacaacttccaacaaattcttggcacatggcctcaacaaattatctttaaagattaaatt 32925  T

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Target: scaffold0008 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 338 - 465
Target Start/End: Complemental strand, 125767 - 125638
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-tgacgggcatgctacactgcttttcaaaaatccataaataga 436  Q
    ||||||||||||||  |||||||| |||||||||| | |||||||||||||| ||||   |||| ||||||||||| || ||  ||||| | ||||||||    
T  125767 tgtaacaccccgttaacccaacaatataaatataataataaatcagagtttatcaccaaaacggacatgctacactactatttcaaaattcttaaataga 125668  T
Q  437 atgaagtactatttattaaa-atcaacttt 465  Q
    || || ||||||||| |||| |||||||||    
T  125667 ataaaatactatttaataaacatcaacttt 125638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 407 - 455
Target Start/End: Original strand, 8884 - 8932
Alignment:
Q  407 tacactgcttttcaaaaatccataaatagaatgaagtactatttattaa 455  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||    
T  8884 tacactgcttttcaaaaatccataaatagaataaaatactatttattaa 8932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 480 - 575
Target Start/End: Complemental strand, 9670 - 9574
Alignment:
Q  480 tcattgcagcggaaagtatttttcaacgttaaa-caacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaattcaaca 575  Q
    |||| ||| |||||| ||| ||||||||||||| |||||||||||||| |||||||||| | ||||| |||||||||| | |||||| ||| |||||    
T  9670 tcatcgcatcggaaaatatctttcaacgttaaaacaacttccaataaacccttggcacatgacctcatcaaaatatctttcaagatttaatccaaca 9574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 4635 - 4703
Alignment:
Q  397 acgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaacttt 465  Q
    |||||||||  |||||||||||||||| | | |||||||||| || |||||||||||||||||||||||    
T  4635 acgggcatgtcacactgcttttcaaaatttcttaaatagaataaaatactatttattaaaatcaacttt 4703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 455
Target Start/End: Original strand, 6050 - 6097
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaa 455  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||    
T  6050 acactgcttttcaaaaatccataaatagaataaaatactatttattaa 6097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 408 - 505
Target Start/End: Original strand, 383497 - 383592
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataaaatatcagttcattgcagcggaaagtatttttcaa 505  Q
    |||||||||||||||| | | |||||||||| || || ||||||| ||||||||  |||||||||||||| | | |||||||||||  ||||||||||    
T  383497 acactgcttttcaaaatttcttaaatagaataaaatattatttatcaaaatcaatcttgataaaatatcaatactttgcagcggaa--tatttttcaa 383592  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 469
Target Start/End: Original strand, 382802 - 382936
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaag----taaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaat 433  Q
    |||||||||||||| |||||||| | ||||||| |||     |||||||||||| ||||    ||||| |||  ||||| |||||||||| | | |||||    
T  382802 tgtaacaccccgttatcccaacatc-taaatattaaataaaataaatcagagttcaacaataaacgggaatgtcacactacttttcaaaatttcttaaat 382900  T
Q  434 agaatgaagtactatttattaaaatcaactttgata 469  Q
    ||||| || | |||||||||||||||||| ||||||    
T  382901 agaataaaatgctatttattaaaatcaaccttgata 382936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 464
Target Start/End: Complemental strand, 3280 - 3215
Alignment:
Q  399 gggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactt 464  Q
    |||||||  |||||||||||||||| | | |||||||||| || ||||||||||||||||||||||    
T  3280 gggcatgtcacactgcttttcaaaacttcttaaatagaataaaatactatttattaaaatcaactt 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 501 - 570
Target Start/End: Complemental strand, 198517 - 198448
Alignment:
Q  501 ttcaacgttaaacaacttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| | ||||| |||||||||||  ||||||||| |||||||||||||||||  |||||||||||||    
T  198517 ttcaacatcaaacatcttccaataaattcttggcacatggcctcaacaaaatatcattaaagattaaatt 198448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 119385 - 119485
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-tgacgggcatgctacactgct-tttcaaaaatccataaatag 435  Q
    ||||||||||||||  ||||||||||||||||||  | |||||||| ||||| ||||   |||||| |||||||||||| |||||||| | |||||||||    
T  119385 tgtaacaccccgttaacccaacaacataaatatattaataaatcagtgtttatcaccaaaacgggcctgctacactgctatttcaaaatttcataaatag 119484  T
Q  436 a 436  Q
    |    
T  119485 a 119485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 408 - 469
Target Start/End: Complemental strand, 950 - 889
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgata 469  Q
    |||||||||||||||| | | |||||||||| || | |||||||||||||||||||||||||    
T  950 acactgcttttcaaaatttcttaaatagaataaaatgctatttattaaaatcaactttgata 889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 378 - 470
Target Start/End: Original strand, 20155 - 20247
Alignment:
Q  378 aatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactttgataa 470  Q
    |||||||||| |||| |  ||||||||   |||||||||||||||| | | |||||||||| || ||||||||||| ||||||||||| ||||    
T  20155 aatcagagttcaacaacaaacgggcatatcacactgcttttcaaaatttcttaaatagaataaaatactatttatttaaatcaactttaataa 20247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 408 - 465
Target Start/End: Original strand, 30852 - 30909
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaacttt 465  Q
    ||||| |||||||||| | |||||||||||| || ||||||||||| |||||||||||    
T  30852 acactacttttcaaaatttcataaatagaataaaatactatttatttaaatcaacttt 30909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 7972 - 8038
Alignment:
Q  397 acgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactt 464  Q
    |||||||||  |||||||||||||||| | | |||||||||| || ||||||||||||||||||||||    
T  7972 acgggcatgtcacactgcttttcaaaatttc-taaatagaataaaatactatttattaaaatcaactt 8038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 464
Target Start/End: Complemental strand, 804 - 737
Alignment:
Q  397 acgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactt 464  Q
    |||||||||  |||||  ||||||||| | | |||||||||| || ||||||||||||||||||||||    
T  804 acgggcatgtcacactttttttcaaaatttcttaaatagaataaaatactatttattaaaatcaactt 737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 578
Target Start/End: Original strand, 43062 - 43168
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |    
T  43062 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaat 43160  T
Q  571 caacatca 578  Q
    ||| ||||    
T  43161 caatatca 43168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 472 - 578
Target Start/End: Complemental strand, 32662 - 32556
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |    
T  32662 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaat 32564  T
Q  571 caacatca 578  Q
    ||| ||||    
T  32563 caatatca 32556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 472 - 573
Target Start/End: Complemental strand, 25497 - 25396
Alignment:
Q  472 atatcagttcattgcagcggaaagtatttttcaacgttaaacaac-ttccaataaaaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    |||||| ||||| ||||||| || || |||||||| ||||||| | ||| |||||| |||||||||  |||||||||||||||||| ||| ||||||| |    
T  25497 atatcaattcatcgcagcgggaa-taattttcaacattaaacatccttcaaataaatccttggcacttggcctcaacaaaatatctttaatgattaaaat 25399  T
Q  571 caa 573  Q
    |||    
T  25398 caa 25396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 465
Target Start/End: Complemental strand, 43748 - 43618
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc-tgacgggcatgctacactgct-tttcaaaaatccataaatag 435  Q
    ||||||||||||||  |||||||| |||||||||| | |||||||||||||| ||||   ||| ||| ||||||||||| |||||||| | | ||||||     
T  43748 tgtaacaccccgttaacccaacaatataaatataataataaatcagagtttatcaccaaaacgagcaagctacactgctatttcaaaatttcttaaataa 43649  T
Q  436 aatgaagtactatttattaaa-atcaacttt 465  Q
    ||| || || |||||| |||| |||||||||    
T  43648 aataaaatattatttaataaacatcaacttt 43618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 414 - 455
Target Start/End: Original strand, 3183 - 3224
Alignment:
Q  414 cttttcaaaaatccataaatagaatgaagtactatttattaa 455  Q
    ||||||||||||||||||||||||| || |||||||||||||    
T  3183 cttttcaaaaatccataaatagaataaaatactatttattaa 3224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 408 - 465
Target Start/End: Original strand, 2351 - 2408
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaacttt 465  Q
    |||||||||||||||| |   |||||||||| || |||||||||||||||||||||||    
T  2351 acactgcttttcaaaatttattaaatagaataaaatactatttattaaaatcaacttt 2408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 7843 - 7786
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaacttt 465  Q
    |||||||||||||||| | | |||||||||| || ||| |||||||||||||||||||    
T  7843 acactgcttttcaaaatttcttaaatagaataaaatacaatttattaaaatcaacttt 7786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 456
Target Start/End: Original strand, 4728 - 4777
Alignment:
Q  408 acactgcttttcaaaaa-tccataaatagaatgaagtactatttattaaa 456  Q
    ||||||||||||||||| | |||||||||||| || ||||||||||||||    
T  4728 acactgcttttcaaaaaattcataaatagaataaaatactatttattaaa 4777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 408 - 465
Target Start/End: Original strand, 177317 - 177374
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaacttt 465  Q
    ||||| |||||||||| | | |||||||||| || |||||||||||||||||||||||    
T  177317 acactacttttcaaaatttcttaaatagaataaaatactatttattaaaatcaacttt 177374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 429 - 465
Target Start/End: Original strand, 174882 - 174918
Alignment:
Q  429 taaatagaatgaagtactatttattaaaatcaacttt 465  Q
    |||||||||| || |||||||||||||||||||||||    
T  174882 taaatagaataaaatactatttattaaaatcaacttt 174918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 408 - 456
Target Start/End: Original strand, 5164 - 5212
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaa 456  Q
    ||||| ||||||||||| ||||||||||||| || ||||||||||||||    
T  5164 acactacttttcaaaaacccataaatagaataaaatactatttattaaa 5212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 338 - 394
Target Start/End: Complemental strand, 99252 - 99196
Alignment:
Q  338 tgtaacaccccgttttcccaacaacataaatataaaagtaaatcagagtttaacacc 394  Q
    ||||||| ||||||  |||||||| |||||||||| | |||||||||||||||||||    
T  99252 tgtaacatcccgttaacccaacaatataaatataataataaatcagagtttaacacc 99196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 338 - 438
Target Start/End: Complemental strand, 794 - 692
Alignment:
Q  338 tgtaacaccccgttttcccaa-caacataaatataaaagtaaatcagagtttaacacc-tgacgggcatgctacactgcttttcaaaaatccataaatag 435  Q
    ||||||||||||||  ||||| ||| |||||||||| | |||||||||||||| ||||   |||||||||  ||||| |||||||||| | | |||||||    
T  794 tgtaacaccccgttaacccaaacaatataaatataataataaatcagagtttatcaccaaaacgggcatgtcacactacttttcaaaatttcttaaatag 695  T
Q  436 aat 438  Q
    |||    
T  694 aat 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 376 - 438
Target Start/End: Complemental strand, 3219 - 3157
Alignment:
Q  376 taaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaat 438  Q
    |||||||||||||||||||  |||||||||  ||||| ||| |||||| ||| ||||||||||    
T  3219 taaatcagagtttaacaccaaacgggcatgtcacactacttctcaaaattccttaaatagaat 3157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 376 - 469
Target Start/End: Complemental strand, 10071 - 9977
Alignment:
Q  376 taaatcagagtttaacacctgacgggcatgctacactgcttttcaaaaatccataaatagaatgaagtactatttattaaa-atcaactttgata 469  Q
    |||||||||||||||||||  |||||||||  || || || ||||||| | | ||||||||||  | ||||||||| |||| |||||||||||||    
T  10071 taaatcagagtttaacaccaaacgggcatgtcactctactattcaaaatttcttaaatagaatataatactatttaataaacatcaactttgata 9977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 570
Target Start/End: Complemental strand, 433 - 369
Alignment:
Q  508 ttaaacaacttccaataa--aaccttggcacacggcctcaacaaaatatctgtaaagattaaatt 570  Q
    ||||||||||||||| ||  || ||||||||| |||||||||||| |||||  ||||||||||||    
T  433 ttaaacaacttccaacaacaaatcttggcacatggcctcaacaaagtatcttcaaagattaaatt 369  T

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Target: scaffold0697; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 534 - 486
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaa 456  Q
    |||||||| ||||||||||| |||||||||| ||||  |||||||||||    
T  534 acactgctattcaaaaatccttaaatagaataaagtgttatttattaaa 486  T

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Target: scaffold0149 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 456
Target Start/End: Complemental strand, 28747 - 28698
Alignment:
Q  408 acactgcttttcaaaaa-tccataaatagaatgaagtactatttattaaa 456  Q
    ||||||||||||||||| | |||||||||||| || ||||||||||||||    
T  28747 acactgcttttcaaaaaattcataaatagaataaaatactatttattaaa 28698  T

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Target: scaffold0149; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 482 - 549
Target Start/End: Original strand, 14537 - 14604
Alignment:
Q  482 attgcagcggaaagtatttttcaacgtt-aaacaacttccaataaaaccttggcacacggcctcaacaa 549  Q
    ||||||||||||| ||| |||||| ||| |||||||||||||| ||  ||||||||| |||||||||||    
T  14537 attgcagcggaaaatatctttcaatgttaaaacaacttccaat-aactcttggcacatggcctcaacaa 14604  T

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Target: scaffold1433 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 379 - 438
Target Start/End: Complemental strand, 311 - 251
Alignment:
Q  379 atcagagtttaacacctgacgggcatgctacactgct-tttcaaaaatccataaatagaat 438  Q
    ||||||||| ||||||  |||||||||||||||||||  ||||||||| | ||||||||||    
T  311 atcagagttaaacaccaaacgggcatgctacactgctaattcaaaaattcttaaatagaat 251  T

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Target: scaffold0069 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 408 - 464
Target Start/End: Original strand, 33901 - 33957
Alignment:
Q  408 acactgcttttcaaaaatccataaatagaatgaagtactatttattaaaatcaactt 464  Q
    |||||||||||||||| | | | |||||||| || | ||||||||||||||||||||    
T  33901 acactgcttttcaaaatttcttgaatagaataaaatgctatttattaaaatcaactt 33957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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