View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11470_low_44 (Length: 251)
Name: NF11470_low_44
Description: NF11470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11470_low_44 |
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Alignment Details
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 44115922 - 44115674
Alignment:
| Q |
1 |
tcaacatagaaattttgtttaagaagggtgtaagaatttccataacctttgtattaggctaagtactaactcaacctgctgaaaatataagcaaatcttg |
100 |
Q |
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| T |
44115922 |
tcaacatagaaattttgttgaagaagggtgtaagaatttccataacctttgtattaggctaagtactaactcaacctgctgaaaatataagcaaatcttg |
44115823 |
T |
|
| Q |
101 |
gtcaaagaaagttggtccaaattttgagtaatattttgttcttatttgaaattaaataaatacttatcactcttgtttttctgttactgttgtttgtagg |
200 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44115822 |
gtcaaagaaagttgttccaaattttgagtaatattttgttcttatttgaaattaaataaatacttatcactcttgtttttctgttactgttgtttgtagg |
44115723 |
T |
|
| Q |
201 |
tttcaccatgcctatgacaactatatgactcatgcatttccggttagtt |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44115722 |
tttcaccatgcctatgacaactatatgactcatgcatttccggttagtt |
44115674 |
T |
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