View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11470_low_50 (Length: 240)
Name: NF11470_low_50
Description: NF11470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11470_low_50 |
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Alignment Details
Target: chr8 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 37493336 - 37493483
Alignment:
| Q |
1 |
tgatcgatgaaggaggaatgttagtagtaggattaaggagtaaggatcaaaatattgacctcttgcttaaaactcttttaccatttcaacttatattttt |
100 |
Q |
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| T |
37493336 |
tgatcgatgaaggaggaatgttagtagtaggattaaggagtaaggatcaaaatattgacctcttgcttaaaactcttttaccgtttcaacttatattttt |
37493435 |
T |
|
| Q |
101 |
ggcctactttggagattaatactctctccatctcaaatttaagtgagg |
148 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37493436 |
ggcctactttggagattaatactctctccatctcaaatttaagtgagg |
37493483 |
T |
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