View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11470_low_54 (Length: 237)
Name: NF11470_low_54
Description: NF11470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11470_low_54 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 41299899 - 41299677
Alignment:
| Q |
1 |
gactctgtgatgttggtgggaaagccaaactgactccatttccaccatgttgttgtaaccctaacgtcaatgacactccaccactgctgccaccttggtg |
100 |
Q |
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| T |
41299899 |
gactctgtgatgttggtgggaaagccaaactaactccatttccaccatgttgttgtaaccctaacgtcaatgacactccaccactgctgccaccttggtg |
41299800 |
T |
|
| Q |
101 |
gaaactctcaccacttgtgtaagcagcaaccatgtcagaagaagaatgatgcgtattataagatgaaaaatcaatatcaaccgatccaaacgtatccgcg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
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| T |
41299799 |
gaaactctcaccacttgtgtaagcagcaaccatgtcagaagaagaatgatgcgtattataagatgaaaaatcaatatcaaccgagccaaacgcatccgcg |
41299700 |
T |
|
| Q |
201 |
gctaattgatgatgattcaaatt |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
41299699 |
gctaattgatgatgattcaaatt |
41299677 |
T |
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