View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11471_low_30 (Length: 229)
Name: NF11471_low_30
Description: NF11471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11471_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 46999189 - 46999361
Alignment:
| Q |
42 |
aacaggggaataccaatgttaaggaggtgtcacgaaatggtgaaccaacaaaatcttcatggaaaccatcacatgagaatgagaatgtgtggaatcagca |
141 |
Q |
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| T |
46999189 |
aacaggggaataccaatgttaaggaggtgtcacgaaatggtgaaccaacaaaatcttcatggaaaccatcacatgagaatgagaatgtgtggaatcagca |
46999288 |
T |
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| Q |
142 |
ttgtgtgagaaggacacgtggcggttatatttacgggtgtaggaaggaacgtttgaatgatattagttggaaa |
214 |
Q |
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|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
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| T |
46999289 |
ttgtgtgagaaggacacgtggcggttatatttactggcgtaggaaggaacgtttgaatgatattagttggaaa |
46999361 |
T |
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