View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11472_high_14 (Length: 331)
Name: NF11472_high_14
Description: NF11472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11472_high_14 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 26455843 - 26455937
Alignment:
| Q |
225 |
ctgcaccaatgctgcttttcacttcatcttcttctttcccaacggttattctttcttccgttacaaaaccactaccctctaaaacccttatccta |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26455843 |
ctgcaccaatgctgcttttcacttcatcttcttctttcccaacggttactctttcttccgttacaaaaccactaccctctaaaacccttatccta |
26455937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University