View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11472_high_18 (Length: 294)

Name: NF11472_high_18
Description: NF11472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11472_high_18
NF11472_high_18
[»] chr5 (32 HSPs)
chr5 (1-120)||(16372034-16372153)
chr5 (136-282)||(28290014-28290158)
chr5 (138-282)||(19291390-19291533)
chr5 (136-282)||(15029679-15029823)
chr5 (136-282)||(8418991-8419134)
chr5 (136-280)||(28289716-28289858)
chr5 (136-282)||(4967139-4967285)
chr5 (142-282)||(5161620-5161759)
chr5 (136-282)||(39083390-39083536)
chr5 (136-244)||(18149765-18149871)
chr5 (136-282)||(15115465-15115606)
chr5 (139-282)||(18150093-18150235)
chr5 (136-282)||(38900676-38900818)
chr5 (136-282)||(21371066-21371210)
chr5 (136-282)||(32697593-32697740)
chr5 (136-274)||(14340785-14340924)
chr5 (143-274)||(38901020-38901147)
chr5 (136-282)||(4966848-4966991)
chr5 (136-194)||(21370718-21370776)
chr5 (136-282)||(22651377-22651521)
chr5 (136-282)||(16752614-16752757)
chr5 (138-184)||(14340432-14340478)
chr5 (206-280)||(14340480-14340554)
chr5 (237-282)||(22651715-22651760)
chr5 (136-266)||(10721818-10721945)
chr5 (144-194)||(20266371-20266421)
chr5 (206-280)||(21370794-21370870)
chr5 (229-282)||(32697458-32697511)
chr5 (206-266)||(28495227-28495286)
chr5 (136-194)||(22651767-22651825)
chr5 (136-197)||(5162022-5162083)
chr5 (141-194)||(32305855-32305908)
[»] chr2 (48 HSPs)
chr2 (136-282)||(38008321-38008465)
chr2 (139-279)||(6949486-6949625)
chr2 (136-282)||(11539669-11539814)
chr2 (136-282)||(4356126-4356270)
chr2 (136-282)||(16175719-16175864)
chr2 (136-282)||(33920981-33921126)
chr2 (136-282)||(13315525-13315673)
chr2 (136-282)||(16952967-16953113)
chr2 (136-282)||(17060938-17061084)
chr2 (136-282)||(62989-63133)
chr2 (139-280)||(43160382-43160522)
chr2 (136-279)||(20127768-20127910)
chr2 (136-282)||(4808911-4809055)
chr2 (136-282)||(11540008-11540152)
chr2 (136-282)||(15551044-15551189)
chr2 (136-282)||(63328-63478)
chr2 (136-282)||(20128107-20128251)
chr2 (136-282)||(42192272-42192416)
chr2 (136-282)||(42192612-42192757)
chr2 (140-280)||(4355791-4355929)
chr2 (139-282)||(4809249-4809390)
chr2 (136-282)||(13399790-13399933)
chr2 (136-282)||(33920644-33920788)
chr2 (136-282)||(38007982-38008127)
chr2 (138-282)||(44219678-44219820)
chr2 (136-282)||(43216079-43216223)
chr2 (136-274)||(13399454-13399590)
chr2 (136-282)||(44220013-44220159)
chr2 (138-280)||(43160043-43160184)
chr2 (136-274)||(15550705-15550842)
chr2 (136-282)||(16953304-16953448)
chr2 (206-282)||(5560920-5560996)
chr2 (136-282)||(9330164-9330309)
chr2 (136-267)||(24140064-24140188)
chr2 (136-282)||(32418191-32418333)
chr2 (136-282)||(649559-649702)
chr2 (136-196)||(5560083-5560143)
chr2 (206-280)||(43215809-43215883)
chr2 (136-186)||(649801-649851)
chr2 (136-282)||(28143400-28143543)
chr2 (136-282)||(6949822-6949958)
chr2 (207-282)||(22445741-22445816)
chr2 (136-264)||(31797166-31797291)
chr2 (210-282)||(9329985-9330056)
chr2 (144-194)||(5035903-5035953)
chr2 (136-194)||(20495225-20495283)
chr2 (163-196)||(32418600-32418633)
chr2 (136-196)||(25336054-25336114)
[»] chr1 (49 HSPs)
chr1 (136-282)||(34555750-34555896)
chr1 (138-282)||(21938597-21938739)
chr1 (136-282)||(9992187-9992331)
chr1 (136-280)||(10278922-10279061)
chr1 (136-282)||(30786803-30786948)
chr1 (136-282)||(16298714-16298858)
chr1 (136-282)||(44954596-44954740)
chr1 (136-282)||(17641734-17641883)
chr1 (136-282)||(37421192-37421338)
chr1 (136-282)||(443921-444065)
chr1 (142-280)||(8230013-8230149)
chr1 (136-282)||(37505438-37505581)
chr1 (136-282)||(44954258-44954402)
chr1 (138-282)||(1837539-1837681)
chr1 (163-282)||(34555438-34555557)
chr1 (136-270)||(37505099-37505232)
chr1 (138-282)||(44582427-44582571)
chr1 (136-282)||(50305152-50305299)
chr1 (139-282)||(9992525-9992666)
chr1 (136-282)||(52335880-52336024)
chr1 (136-282)||(10278580-10278725)
chr1 (142-280)||(17641403-17641539)
chr1 (138-279)||(16299055-16299193)
chr1 (136-280)||(4080053-4080195)
chr1 (136-272)||(2867943-2868077)
chr1 (136-280)||(2868080-2868222)
chr1 (136-282)||(23340215-23340359)
chr1 (161-282)||(6224754-6224875)
chr1 (136-282)||(44582089-44582233)
chr1 (138-280)||(29439303-29439434)
chr1 (138-197)||(30787251-30787310)
chr1 (206-279)||(1744427-1744500)
chr1 (138-282)||(8229671-8229816)
chr1 (136-282)||(29438962-29439107)
chr1 (136-197)||(37421397-37421459)
chr1 (136-282)||(50926262-50926408)
chr1 (136-197)||(50304471-50304532)
chr1 (210-282)||(30787142-30787214)
chr1 (206-282)||(50926611-50926687)
chr1 (136-282)||(9833522-9833666)
chr1 (141-266)||(39485102-39485224)
chr1 (206-282)||(50304882-50304958)
chr1 (136-282)||(29021234-29021379)
chr1 (136-266)||(45048187-45048314)
chr1 (147-190)||(29020923-29020966)
chr1 (136-187)||(50419422-50419473)
chr1 (225-282)||(23526777-23526833)
chr1 (141-194)||(23526986-23527039)
chr1 (136-184)||(44291777-44291825)
[»] chr7 (42 HSPs)
chr7 (136-282)||(9181564-9181708)
chr7 (136-282)||(25637568-25637712)
chr7 (136-282)||(48247961-48248106)
chr7 (136-280)||(786814-786957)
chr7 (138-282)||(27245574-27245716)
chr7 (136-282)||(5745671-5745815)
chr7 (136-282)||(28687869-28688013)
chr7 (138-282)||(7732522-7732664)
chr7 (136-282)||(15712397-15712541)
chr7 (136-282)||(16081331-16081475)
chr7 (136-280)||(14311659-14311801)
chr7 (136-282)||(7732857-7733001)
chr7 (136-282)||(27245235-27245380)
chr7 (140-282)||(11971370-11971514)
chr7 (136-282)||(9181779-9181926)
chr7 (142-282)||(26026688-26026826)
chr7 (136-282)||(26026349-26026494)
chr7 (136-282)||(35161171-35161316)
chr7 (136-280)||(16081671-16081813)
chr7 (136-282)||(24929673-24929822)
chr7 (136-280)||(26048319-26048460)
chr7 (136-263)||(28687625-28687750)
chr7 (136-282)||(26047989-26048124)
chr7 (136-282)||(787152-787300)
chr7 (136-282)||(25637229-25637374)
chr7 (163-282)||(5746009-5746128)
chr7 (138-282)||(48247621-48247767)
chr7 (206-282)||(11973772-11973848)
chr7 (136-282)||(14311347-14311492)
chr7 (136-282)||(39388636-39388782)
chr7 (136-197)||(16917745-16917806)
chr7 (138-283)||(2758067-2758210)
chr7 (136-282)||(34595142-34595286)
chr7 (210-281)||(35160906-35160976)
chr7 (136-197)||(5333912-5333973)
chr7 (136-266)||(9394117-9394244)
chr7 (136-196)||(5334273-5334333)
chr7 (206-282)||(34594683-34594758)
chr7 (136-195)||(35160685-35160746)
chr7 (210-257)||(5184498-5184545)
chr7 (141-192)||(39136991-39137042)
chr7 (142-194)||(49064176-49064228)
[»] chr6 (18 HSPs)
chr6 (136-282)||(25472382-25472527)
chr6 (138-282)||(5114502-5114644)
chr6 (138-282)||(24640555-24640697)
chr6 (136-282)||(25468881-25469027)
chr6 (136-282)||(31073512-31073656)
chr6 (136-279)||(30251064-30251206)
chr6 (164-279)||(29891453-29891566)
chr6 (136-282)||(31573752-31573901)
chr6 (136-282)||(31574095-31574239)
chr6 (136-273)||(5120848-5120983)
chr6 (206-282)||(28636566-28636642)
chr6 (139-282)||(29891115-29891256)
chr6 (136-250)||(28636324-28636435)
chr6 (136-246)||(31073175-31073290)
chr6 (206-282)||(30250791-30250867)
chr6 (206-275)||(11523786-11523854)
chr6 (136-177)||(18297662-18297703)
chr6 (136-197)||(32836449-32836510)
[»] chr3 (55 HSPs)
chr3 (136-282)||(51473225-51473370)
chr3 (136-284)||(55389637-55389783)
chr3 (136-282)||(41998261-41998406)
chr3 (139-282)||(50662782-50662923)
chr3 (136-282)||(43678327-43678471)
chr3 (136-282)||(47431728-47431873)
chr3 (136-282)||(49951578-49951722)
chr3 (136-282)||(51828327-51828472)
chr3 (138-282)||(51828910-51829052)
chr3 (136-282)||(32730759-32730903)
chr3 (136-282)||(44676842-44676986)
chr3 (136-282)||(46013792-46013937)
chr3 (136-273)||(16701168-16701306)
chr3 (136-279)||(40838684-40838825)
chr3 (136-282)||(330206-330350)
chr3 (136-282)||(2051327-2051475)
chr3 (136-274)||(38535341-38535477)
chr3 (136-282)||(55389967-55390111)
chr3 (136-282)||(40275125-40275271)
chr3 (139-282)||(40839022-40839163)
chr3 (136-282)||(51827989-51828133)
chr3 (142-282)||(52236854-52236992)
chr3 (136-282)||(34104670-34104813)
chr3 (136-282)||(46013454-46013598)
chr3 (136-282)||(49951916-49952060)
chr3 (144-282)||(51828579-51828716)
chr3 (136-282)||(52375701-52375845)
chr3 (163-282)||(34105018-34105137)
chr3 (136-240)||(49720773-49720875)
chr3 (136-280)||(52237189-52237331)
chr3 (136-282)||(25534922-25535067)
chr3 (139-282)||(30513757-30513898)
chr3 (206-280)||(51472955-51473029)
chr3 (136-282)||(40275464-40275607)
chr3 (136-282)||(49720403-49720547)
chr3 (136-282)||(52375359-52375503)
chr3 (136-244)||(329878-329984)
chr3 (136-280)||(2044303-2044445)
chr3 (136-276)||(14654231-14654361)
chr3 (136-280)||(38535667-38535809)
chr3 (136-267)||(22370628-22370758)
chr3 (138-279)||(43678657-43678796)
chr3 (136-282)||(14654561-14654703)
chr3 (139-270)||(44676507-44676636)
chr3 (136-282)||(39010107-39010250)
chr3 (136-282)||(32730421-32730565)
chr3 (136-282)||(43222422-43222566)
chr3 (136-189)||(39010482-39010535)
chr3 (143-276)||(43222765-43222897)
chr3 (136-240)||(16689390-16689492)
chr3 (136-282)||(41998600-41998742)
chr3 (136-194)||(36701552-36701610)
chr3 (138-194)||(36701140-36701196)
chr3 (136-197)||(27199734-27199795)
chr3 (144-184)||(8873730-8873770)
[»] chr8 (33 HSPs)
chr8 (136-282)||(18049622-18049767)
chr8 (136-282)||(18428131-18428276)
chr8 (136-282)||(9797096-9797241)
chr8 (136-282)||(34799111-34799256)
chr8 (138-282)||(28254459-28254602)
chr8 (136-282)||(28254796-28254940)
chr8 (136-283)||(599867-600012)
chr8 (136-277)||(15256203-15256345)
chr8 (139-282)||(16578466-16578607)
chr8 (136-282)||(9796758-9796902)
chr8 (144-282)||(34799453-34799589)
chr8 (136-282)||(35427182-35427326)
chr8 (138-282)||(41260631-41260773)
chr8 (136-282)||(2208746-2208891)
chr8 (136-282)||(7910986-7911130)
chr8 (136-282)||(42035804-42035948)
chr8 (136-282)||(18049961-18050105)
chr8 (142-279)||(26252847-26252982)
chr8 (136-278)||(599564-599704)
chr8 (136-282)||(5731182-5731326)
chr8 (136-268)||(5730849-5730979)
chr8 (163-282)||(35693927-35694046)
chr8 (136-279)||(42036144-42036286)
chr8 (136-238)||(41260303-41260403)
chr8 (136-281)||(6115481-6115625)
chr8 (139-280)||(35694242-35694389)
chr8 (136-244)||(15255885-15255991)
chr8 (210-282)||(35426917-35426989)
chr8 (136-282)||(16578140-16578285)
chr8 (225-282)||(35163817-35163874)
chr8 (138-197)||(7910650-7910709)
chr8 (163-197)||(18674207-18674241)
chr8 (229-266)||(44831371-44831408)
[»] chr4 (52 HSPs)
chr4 (136-281)||(56077695-56077838)
chr4 (139-282)||(26974318-26974460)
chr4 (136-282)||(45838917-45839063)
chr4 (136-278)||(21034267-21034408)
chr4 (136-282)||(28465451-28465595)
chr4 (136-282)||(34789414-34789558)
chr4 (136-282)||(41114189-41114335)
chr4 (136-282)||(14439860-14440004)
chr4 (136-282)||(14440198-14440342)
chr4 (141-282)||(54440939-54441078)
chr4 (136-280)||(12593056-12593198)
chr4 (136-282)||(28166036-28166180)
chr4 (136-283)||(46737024-46737169)
chr4 (138-282)||(34807509-34807651)
chr4 (136-282)||(24851835-24851980)
chr4 (136-282)||(34789752-34789897)
chr4 (138-282)||(6616706-6616849)
chr4 (138-282)||(34807150-34807293)
chr4 (136-282)||(45838579-45838723)
chr4 (138-282)||(16214865-16215007)
chr4 (136-280)||(46736687-46736829)
chr4 (136-282)||(12593393-12593537)
chr4 (136-282)||(21034606-21034751)
chr4 (136-282)||(55677327-55677472)
chr4 (136-282)||(28465113-28465257)
chr4 (136-282)||(35643587-35643743)
chr4 (136-279)||(33689861-33690001)
chr4 (138-282)||(41608408-41608551)
chr4 (136-282)||(54440603-54440745)
chr4 (136-269)||(19528901-19529033)
chr4 (136-280)||(36168361-36168506)
chr4 (136-282)||(36168701-36168845)
chr4 (206-280)||(24851565-24851639)
chr4 (157-282)||(19529063-19529187)
chr4 (141-282)||(35193345-35193483)
chr4 (136-197)||(33777664-33777725)
chr4 (136-195)||(24851348-24851407)
chr4 (136-192)||(1397627-1397683)
chr4 (141-197)||(17504412-17504468)
chr4 (136-282)||(229529-229673)
chr4 (227-282)||(229282-229337)
chr4 (225-275)||(18965513-18965563)
chr4 (139-240)||(6617074-6617173)
chr4 (136-282)||(40160126-40160269)
chr4 (142-234)||(26974662-26974753)
chr4 (136-195)||(41608870-41608929)
chr4 (140-272)||(18965176-18965306)
chr4 (139-244)||(33778020-33778123)
chr4 (136-194)||(23986552-23986610)
chr4 (136-178)||(31297161-31297203)
chr4 (136-196)||(30597973-30598033)
chr4 (242-282)||(54995437-54995477)
[»] scaffold0712 (2 HSPs)
scaffold0712 (138-282)||(6426-6568)
scaffold0712 (217-282)||(6761-6826)
[»] scaffold0709 (2 HSPs)
scaffold0709 (138-282)||(6444-6586)
scaffold0709 (217-282)||(6779-6844)
[»] scaffold0097 (2 HSPs)
scaffold0097 (136-282)||(46298-46443)
scaffold0097 (136-282)||(46637-46782)
[»] scaffold0025 (1 HSPs)
scaffold0025 (206-282)||(78417-78493)
[»] scaffold0007 (1 HSPs)
scaffold0007 (136-282)||(205738-205881)
[»] scaffold0021 (1 HSPs)
scaffold0021 (141-194)||(159337-159390)


Alignment Details
Target: chr5 (Bit Score: 112; Significance: 1e-56; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 16372034 - 16372153
Alignment:
Q  1 ttatagttaaaaagaaaatatggttaaattattttcatatatattagctataagaggtttcatactcttttatggtgagcttatcaaaattaccgaaaaa 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16372034 ttatagttaaaaagaaaatatggttagattattttcatatatattagctataagaggtttcatactcttttatggagagcttatcaaaattaccgaaaaa 16372133  T
Q  101 gtgttcatataagatatttt 120  Q
    ||||||||||||||||||||    
T  16372134 gtgttcatataagatatttt 16372153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 28290158 - 28290014
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||    
T  28290158 accaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactatatgtttttt--gcagttttagtcctatctccctatttccaa 28290061  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||    
T  28290060 ctccagaaacgcacagaaatgacagttttagtccaaccatctatgct 28290014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 19291390 - 19291533
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||| ||||| | |||||||||||    
T  19291390 caactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt-gcagttttagtcttatctccttatttccaact 19291488  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  19291489 ccataaacgcacagaaatgacagttttagtccaaccacctatgct 19291533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 15029823 - 15029679
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||        ||||||||||| | |||| |||||||| ||    
T  15029823 accaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcagttttagttcgatctccctatttcaaa 15029726  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  15029725 ctccagaaacgcacataaatgacagttttagtccaaccacctatgct 15029679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 8419134 - 8418991
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||         |||||||||||||||||| |||||||||||    
T  8419134 accaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaactatat---ttttttgcagttttagtcctatctccctatttccaa 8419038  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| | ||||| ||||| ||||||||||    
T  8419037 ctccagaaacgcacagaaatgacaattttaatccaaacacctatgct 8418991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 136 - 280
Target Start/End: Original strand, 28289716 - 28289858
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| | |||||| || ||||||||||||||||||||||| |||| ||||||         ||||||||||||||||| |||||||||||    
T  28289716 accaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttc--cagttttagtcctatctccctatttccaa 28289813  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||    
T  28289814 ctccagaaacgcacagaaatgacagttttagtccaaccacctatg 28289858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 4967285 - 4967139
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||| ||||||||| || || ||||||||||||||||||||||| |||||||||||        |||||||||||||||| | |||||||| ||    
T  4967285 accaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttgcagttttagtcctatatccctatttctaa 4967186  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| | ||||||||| |||||||||||||||||||||||| ||||||    
T  4967185 ctctagaaacgcacataaatgatagttttagtccaaccacatatgct 4967139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 5161620 - 5161759
Alignment:
Q  142 tcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccat 241  Q
    |||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||||        |||||||||||| ||||||||||||||||||| ||     
T  5161620 tcacgaaaattgtcatatcttttttaaatcgaacaaaattgtctttaaattatatgttttttt-gcagttttagtcttatcttcctatttccaacttcaa 5161718  T
Q  242 aaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||| |||||||| ||||||||| ||||||||||||||    
T  5161719 aaacgcatagaaatgacagttttagttcaaccacctatgct 5161759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 39083390 - 39083536
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| || ||||||||||||         |||||||||||| ||||| | |||||||||    
T  39083390 accaactcacgaaaatggtcctattttttttaaatcgaacaaaattgttcttaaactatatatattttttgcagttttagtcatatctccatatttccaa 39083489  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||| ||||||||||| ||||||||||||| ||| ||||||    
T  39083490 ctccagaaacacacagaaatgacagttttagtccaatcacatatgct 39083536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 18149765 - 18149871
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||| | |||||||||||    
T  18149765 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcagttttagtcctatttccctatttccaa 18149862  T
Q  236 ctccataaa 244  Q
    |||||||||    
T  18149863 ctccataaa 18149871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 15115606 - 15115465
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||         |||||||||||| ||||  |||||||||||    
T  15115606 accaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaactatat-----ttttgcagttttagtcatatcgccctatttccaa 15115512  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| | ||||||||| |||||| ||||||||| ||||||| ||||||    
T  15115511 ctcaaaaaacgcacataaatgacagttttagttcaaccacatatgct 15115465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 139 - 282
Target Start/End: Complemental strand, 18150235 - 18150093
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    ||||||||||| ||||| || || ||||||||||||||||||| ||| |||||||||||        |||||||||||||||||| ||||||||||||||    
T  18150235 aactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaactatatgttttttt-gcagttttagtcctatctccctatttccaactc 18150137  T
Q  239 cataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    || ||||||||| ||||||  |||||||| ||||||||||||||    
T  18150136 cagaaacgcacataaatgaccgttttagttcaaccacctatgct 18150093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 38900676 - 38900818
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||||||||| || || || ||||||||||||||||||||||| |||| ||||||        |||||||||||||||||| |||||||||||    
T  38900676 accaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattatatgtttttt--gcagttttagtcctatctccctatttccaa 38900773  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||| ||| |||||| ||  ||||||||||||||||||||    
T  38900774 ctccataaacgtacataaatgacag--ttagtccaaccacctatgct 38900818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 21371210 - 21371066
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||  ||| ||||| || || ||||||||| ||||||||||||| |||||||||||        ||| |||||||||||||| |||||||||||    
T  21371210 accaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactatatgtttttt--gcaattttagtcctatctccctatttccaa 21371113  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||| ||||||||||||||    
T  21371112 ctccagaaacgcacataaatgacagttttagttcaaccacctatgct 21371066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 32697740 - 32697593
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnn-gcagttttagtcctatcttcctatttcca 234  Q
    |||||||||||||| ||||| || || |||||||||||||| |||||||| |||||||||||         |||||||||||  || || ||||||||||    
T  32697740 accaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactatatgttttattttgcagttttagtgatacctccctatttcca 32697641  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||| |||| ||||||||||| |  |||||||||||||||||||||    
T  32697640 actccagaaacacacagaaatgacaaatttagtccaaccacctatgct 32697593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 274
Target Start/End: Complemental strand, 14340924 - 14340785
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatat-gnnnnnnnngcagttttagtcctatcttcctatttcca 234  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||||||| ||||||||||          | |||||||||||||||| | ||||||||    
T  14340924 accaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaactatatatttttttttgtagttttagtcctatctccttatttcca 14340825  T
Q  235 actccataaacgcacagaaatgatagttttagtccaacca 274  Q
    |||||| ||||| | |||||||| |||||||||| |||||    
T  14340824 actccaaaaacgtagagaaatgacagttttagtcaaacca 14340785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 143 - 274
Target Start/End: Complemental strand, 38901147 - 38901020
Alignment:
Q  143 cacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccata 242  Q
    ||||||||||||| || | ||||||||||||||||||||||||||||||||||||        |||||||||||  ||||| | |||||||||  ||| |    
T  38901147 cacgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcagttttagttatatctccttatttccaa--ccaga 38901052  T
Q  243 aacgcacagaaatgatagttttagtccaacca 274  Q
    |||||||| |||||| ||||||||||||||||    
T  38901051 aacgcacataaatgacagttttagtccaacca 38901020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 4966848 - 4966991
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||| ||  |  || ||||||||||||||||||||||| |||||||||||        |||||||||||| ||||  |||||||||||    
T  4966848 accaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactatatgttttta--gcagttttagtcatatcc-cctatttccaa 4966944  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| | ||| |||||||||||| |||||| | |||||||||||||||    
T  4966945 ctctagaaatgcacagaaatgacagttttgggccaaccacctatgct 4966991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 21370718 - 21370776
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 194  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  21370718 accaactgacgaaaatggttatatcttttttaaatcgaacaaaatcgtctttaaactat 21370776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 22651377 - 22651521
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnnnnngcagttttagtcctatcttcctatttcca 234  Q
    |||| |||||| ||||||||||  || ||||||||| ||||||| | |||||||||||| |||        ||||||||||||||| || | ||||| ||    
T  22651377 accagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaactatcatgttttt---gcagttttagtcctacctccttattttca 22651473  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||| ||||||||| |||||  ||||||||||||||||||||||||    
T  22651474 actccagaaacgcacaaaaatggcagttttagtccaaccacctatgct 22651521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 16752614 - 16752757
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||| |||||||||||| ||||   | ||| ||||||||||||||||||| |||||||||||        |||||||| ||| || || ||||||| |||    
T  16752614 accagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaactatatgtttttt--gcagtttttgtcatacct-cctattttcaa 16752710  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||||| ||||||||||||||||| || ||| ||||||||    
T  16752711 ctccataaacgcaaagaaatgatagttttagacctaccccctatgct 16752757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 14340432 - 14340478
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtc 184  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  14340432 caactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtc 14340478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 14340480 - 14340554
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||||||||| ||||||||  ||||||||||||| | ||||  |||||||||| ||||||||||||||||| ||||    
T  14340480 gcagttttaatcctatctctctatttccaactctagaaacctacagaaatgacagttttagtccaaccacttatg 14340554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 22651760 - 22651715
Alignment:
Q  237 tccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||    
T  22651760 tccataaacgcacataaatgacagttttagtccaaccacctatgct 22651715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 10721818 - 10721945
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnnnnngcagttttagtcctatcttcctatttcca 234  Q
    |||| ||||||||||||||| | ||| ||| ||||||||||||||||||| |||||||| |||        ||||||||||||||| | |||||||| ||    
T  10721818 accagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgtcc-taaactatcatg--ttttttgcagttttagtccta-cctcctattttca 10721913  T
Q  235 actccataaacgcacagaaatgatagttttag 266  Q
    |||||| ||||| | |||||||| ||||||||    
T  10721914 actccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 20266421 - 20266371
Alignment:
Q  144 acgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 194  Q
    |||||||||||||| ||| ||| ||||||||||||||||||| ||||||||    
T  20266421 acgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaactat 20266371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 21370794 - 21370870
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgc--acagaaatgatagttttagtccaaccacctatg 280  Q
    ||| |||||||||||||| |||||||||||||||| ||||||  | | |||||  ||||||||||| ||||||||||    
T  21370794 gcaattttagtcctatctccctatttccaactccagaaacgcaaaaaaaaatgtcagttttagtccgaccacctatg 21370870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 32697458 - 32697511
Alignment:
Q  229 tttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||| |||| ||||||||||| |  |||||||||||||||||||||    
T  32697458 tttccaactccagaaacacacagaaatgacaaatttagtccaaccacctatgct 32697511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 28495286 - 28495227
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttag 266  Q
    ||||||||||||||| || ||||||| |||||||| || |||| |||||||||||||||||    
T  28495286 gcagttttagtcctacct-cctattttcaactccagaaccgcagagaaatgatagttttag 28495227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 22651825 - 22651767
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 194  Q
    |||| ||||||||||||||  |  |||||| ||||||||||||||||||| ||||||||    
T  22651825 accagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtccataaactat 22651767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 5162083 - 5162022
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 197  Q
    ||||||||| || | | |||||| || ||||||||||||||||||||||| |||| ||||||    
T  5162083 accaactcatgagattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatg 5162022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 32305855 - 32305908
Alignment:
Q  141 ctcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 194  Q
    ||||||||||| ||  || || ||||||||||||||||||||||| ||||||||    
T  32305855 ctcacgaaaattgttctacctcttttaaatcgaacaaaatcgtccctaaactat 32305908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 38008465 - 38008321
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||    
T  38008465 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt--gcagttttagtcctatctccctatttccaa 38008368  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  38008367 ctccataaacgcacataaatgatagttttagtccaaccacctatgct 38008321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 139 - 279
Target Start/End: Original strand, 6949486 - 6949625
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||| ||||||||||||||    
T  6949486 aactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactatatgttttttt-gcagttttagtcctatctccctatttccaactc 6949584  T
Q  239 cataaacgcacagaaatgatagttttagtccaaccacctat 279  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  6949585 cataaacgcacagaaatgacagttttagtccaaccacctat 6949625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 11539669 - 11539814
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||    
T  11539669 accaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatgttttttt-gcagttttagtcctatctccctatttccaa 11539767  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  11539768 ctccagaaacgcacataaatgacagttttagtccaaccacctatgct 11539814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 4356270 - 4356126
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| | |||| | |||||||||||    
T  4356270 accaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcagttttaattctatttccctatttccaa 4356173  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  4356172 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4356126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 16175864 - 16175719
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||    
T  16175864 accaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactatatgttttttt-gcagttttagtcctatctccctatttccaa 16175766  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  16175765 ctccagaaacgcacataaatgacagttttagtccaaccacctatgct 16175719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 33921126 - 33920981
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||        |||||||||||||||||| |||||||||||    
T  33921126 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatgttttttt-gcagttttagtcctatctccctatttccaa 33921028  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| | |||||||||||||||| ||||||||||||||||||||||||    
T  33921027 ctctagaaacgcacagaaatgacagttttagtccaaccacctatgct 33920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 13315525 - 13315673
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-nnnnnnnngcagttttagtcctatcttcctatttcca 234  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||| ||||||||||    
T  13315525 accaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttttgcagttttagtcctatctccctatttcca 13315624  T
Q  235 actcca-taaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||  ||| |||||||||||| ||||||||||||||||||||||||    
T  13315625 actccagaaaatgcacagaaatgacagttttagtccaaccacctatgct 13315673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 16952967 - 16953113
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        || ||||||||| ||||| |||||||||||    
T  16952967 accaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttgcggttttagtcatatctccctatttccaa 16953066  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| | |||||||||||||||| |||||||||||||| |||||||||    
T  16953067 ctctagaaacgcacagaaatgacagttttagtccaactacctatgct 16953113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 17060938 - 17061084
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||        || ||||||||| ||||| |||||||||||    
T  17060938 accaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttgcggttttagtcatatctccctatttccaa 17061037  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| | |||||||||||||||| |||||||||||||| |||||||||    
T  17061038 ctctagaaacgcacagaaatgacagttttagtccaactacctatgct 17061084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 62989 - 63133
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||    
T  62989 accaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactatatgtttttt--gcagttttagtcctatctccctatttccaa 63086  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| | ||||||||| |||||| ||||||||||||||||||||||||    
T  63087 ctcaagaaacgcacataaatgacagttttagtccaaccacctatgct 63133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 139 - 280
Target Start/End: Complemental strand, 43160522 - 43160382
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||        |||||||||||||||||| ||||||||||||||    
T  43160522 aactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactatatgttttttt-gcagttttagtcctatctccctatttccaactc 43160424  T
Q  239 cataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    || |||||||||||||||| ||||||| |||||||| |||||    
T  43160423 cagaaacgcacagaaatgacagttttaatccaaccatctatg 43160382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 136 - 279
Target Start/End: Original strand, 20127768 - 20127910
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||    
T  20127768 accaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-tttttttgcagttttagtcctatctccctatttccaa 20127866  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctat 279  Q
    | ||| ||||||||| |||||| | |||||||||||||||||||    
T  20127867 ccccagaaacgcacaaaaatgacaattttagtccaaccacctat 20127910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 4808911 - 4809055
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| || || || || ||||||||||||||||||||||| |||||||||||        | ||||||||||||||||||||||||||||    
T  4808911 accaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactatatgtttttt--gtagttttagtcctatcttcctatttccaa 4809008  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  4809009 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4809055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 11540152 - 11540008
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||        |||||||||||| ||| | |||||||||||    
T  11540152 accaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgtttttt--gcagttttagtcatatatccctatttccaa 11540055  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  11540054 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 11540008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 15551189 - 15551044
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||  ||||||        |||||||||||||||||| |||||||||||    
T  15551189 accaactcacaaaaatggtcatatattttttaaatcgaacaaaatcgtccttaagttatatgttttttt-gcagttttagtcctatctccctatttccaa 15551091  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||| ||||||||||||||||||| ||||||    
T  15551090 ctccagaaacgcacataaataatagttttagtccaaccacatatgct 15551044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 63478 - 63328
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnn----gcagttttagtcctatcttcctattt 231  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||||| |||||||||||            ||||||||||||||||||||||||||    
T  63478 accaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactatatgttttttttttttgcagttttagtcctatcttcctattt 63379  T
Q  232 ccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||| | ||||||||| |||||| ||||||||||||||||||||||||    
T  63378 ccaactctagaaacgcacataaatgacagttttagtccaaccacctatgct 63328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 20128251 - 20128107
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||| |||||||||||||||||||||||||        ||| |||||||||||||| |||||||||||    
T  20128251 accaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactatatgtttttt--gcaattttagtcctatctccctatttccaa 20128154  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  20128153 ctccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 20128107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 42192272 - 42192416
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||        |||||||||||||||||| |||||||| ||    
T  42192272 accaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttctaa 42192369  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||| ||||||    
T  42192370 ctccagaaacgcacataaatgacagttttagtccaaccacatatgct 42192416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 42192757 - 42192612
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||| ||||||| |||        |||||||||||| ||||  |||||||||||    
T  42192757 accaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactagatgttttttt-gcagttttagtcatatccccctatttccaa 42192659  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  42192658 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 42192612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 140 - 280
Target Start/End: Original strand, 4355791 - 4355929
Alignment:
Q  140 actcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactcc 239  Q
    |||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||        |||||||||||||||||| ||||||| |||||||    
T  4355791 actcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctattttcaactcc 4355888  T
Q  240 ataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    | ||||||||| |||||| ||||||||||||||||||||||    
T  4355889 agaaacgcacataaatgacagttttagtccaaccacctatg 4355929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 282
Target Start/End: Complemental strand, 4809390 - 4809249
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    ||||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||||||        |||||||||||||||||| |||||||||||||     
T  4809390 aactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaactatatgtttttt--gcagttttagtcctatctccctatttccaacta 4809293  T
Q  239 cataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    || ||| ||||| |||||| ||||||||||||||||||||||||    
T  4809292 caaaaaagcacaaaaatgacagttttagtccaaccacctatgct 4809249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 13399933 - 13399790
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||         |||||||||||| ||||| |||||||||||    
T  13399933 accaactcacgaaaatggtc-tatttcttttaaatcgaacaaaattgtccttaaactatat--attttttgcagttttagtcatatctccctatttccaa 13399837  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  13399836 ctccataaacgcatagaaatgacagttttaatccaaccacctatgct 13399790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 33920644 - 33920788
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| || ||||| || ||||||||||||||||||||||| |||||||||||        |||||||||||||||||| ||||||| |||    
T  33920644 accaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgattttt--gcagttttagtcctatctccctattttcaa 33920741  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||| |||||||| |||||||||||| |||||||||||    
T  33920742 ctccagaaacgcatagaaatgacagttttagtccagccacctatgct 33920788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 38007982 - 38008127
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||        |||||||||||| ||||| |||||||||||    
T  38007982 accaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttt-gcagttttagtcatatctccctatttccaa 38008080  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||| ||||||| ||||||||    
T  38008081 ctccaaaaacgcacagaaatgacagttttaatccaaccgcctatgct 38008127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 44219678 - 44219820
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||| |||||| || || ||||||||||||||||||||| ||||||||| ||||||        |||||||||||||||||| ||| |||||||||    
T  44219678 caactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattatatgtttttt--gcagttttagtcctatctccctgtttccaact 44219775  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| |||||||||||||||| ||||||||||||| ||||||||||    
T  44219776 ccagaaacgcacagaaatgacagttttagtccaatcacctatgct 44219820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 43216223 - 43216079
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||| ||||||||||         ||||||||||||||||||  ||||||||||    
T  43216223 accaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat--attttttgcagttttagtcctatctctctatttccaa 43216126  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||| |||||||||||| | ||||||||||||||||||||||    
T  43216125 ctccagaaatgcacagaaatgacaattttagtccaaccacctatgct 43216079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 274
Target Start/End: Original strand, 13399454 - 13399590
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||| |||||||| |||||||| || |||||||| |||||||||||||| |||||||||||        |||||||||||||||||| |||||||||||    
T  13399454 accaattcacgaaattggtcatacctcttttaaatggaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttccaa 13399551  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaacca 274  Q
    ||||| |||||||||||||||| |||||||||| |||||    
T  13399552 ctccagaaacgcacagaaatgacagttttagtctaacca 13399590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 44220159 - 44220013
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatct--tcctatttcc 233  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||        | |||||||||| |||||   |||||||||    
T  44220159 accaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactatatg--ttttttgtagttttagtcatatctccccctatttcc 44220062  T
Q  234 aactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||| ||||| ||| |||||||| ||||||||||||||||||||||    
T  44220061 aactccagaaacgtacaaaaatgataattttagtccaaccacctatgct 44220013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 43160043 - 43160184
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||          |||||||||||||||||| ||||||| |||||    
T  43160043 caactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatac-atttttttgcagttttagtcctatctccctattttcaact 43160141  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||| ||||||||| |||||| |||||||||| |||||||||||    
T  43160142 ccagaaacgcacataaatgacagttttagtctaaccacctatg 43160184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 274
Target Start/End: Original strand, 15550705 - 15550842
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||        |||||||||||||||| | ||||||| |||    
T  15550705 accaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttt-gcagttttagtcctatttccctattttcaa 15550803  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaacca 274  Q
    ||||| |||||||||||||||| ||||||||| ||||||    
T  15550804 ctccagaaacgcacagaaatgacagttttagttcaacca 15550842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 16953448 - 16953304
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||| |||| ||||| || || |||||||||||||||||  |||| |||| ||||||        |||||||||||||||||| |||||||||||    
T  16953448 accaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtatatgtttttt--gcagttttagtcctatctccctatttccaa 16953351  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||    
T  16953350 ctccaaaaacgcacagaaatgacagttttagtccaaccaactatgct 16953304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 5560996 - 5560920
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  5560996 gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 5560920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 9330309 - 9330164
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| | |||||| || |||||||||||||||||||||||  ||||||||||        |||||||||||||||||| ||||||| |||    
T  9330309 accaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactatatgttttttt-gcagttttagtcctatctacctattttcaa 9330211  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||  | |||| || |||||||| ||||||||||||||||||||||||    
T  9330210 ctatagaaacacatagaaatgacagttttagtccaaccacctatgct 9330164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 267
Target Start/End: Complemental strand, 24140188 - 24140064
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| || |||||||||||| ||||||||||||| ||||||||||         ||||||||||| |||| | |||||||||||    
T  24140188 accaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaactatat-------ttgcagttttagttctatatccctatttccaa 24140096  T
Q  236 ctccataaacgcacagaaatgatagttttagt 267  Q
    ||||| |||||||||||||||| | |||||||    
T  24140095 ctccagaaacgcacagaaatgacatttttagt 24140064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 32418191 - 32418333
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || |||  |||||||||||||||||| ||||||||||         |||||||||||| ||||| | |||||||||    
T  32418191 accaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactatat--attttttgcagttttagtcatatctccttatttccaa 32418286  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||    
T  32418287 ctccagaaacgcacagaaatgacatttttagtccaaccacctatgct 32418333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 649559 - 649702
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||| |||||| ||||| || || ||||||||||||||||||||||| |||||||||||        ||||||||||| || ||| |||||||||||    
T  649559 accaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcagttttagttctgtctccctatttccaa 649656  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| ||||||  ||||||||||| |||||||||||    
T  649657 ctccagaaacgcacataaatga-cgttttagtccagccacctatgct 649702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 5560083 - 5560143
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatat 196  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5560083 accaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaactatat 5560143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 43215809 - 43215883
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    |||||||||||| ||||| ||||||| |||||||| ||||| | |||||||| ||||||||||||||||||||||    
T  43215809 gcagttttagtcatatctccctattttcaactccaaaaacgaatagaaatgacagttttagtccaaccacctatg 43215883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 649851 - 649801
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtcct 186  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  649851 accaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtcct 649801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 28143543 - 28143400
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnnnnngcagttttagtcctatcttcctatttcca 234  Q
    |||| ||||||||||||||| |  || ||| ||||||||||||||||||| |||||||| |||        ||||||||||||||| | |||||||| ||    
T  28143543 accagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatg---tttttgcagttttagtccta-cgtcctattttca 28143448  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||| ||||||| |||||||| |||||||| || ||| ||||||||    
T  28143447 actccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 6949958 - 6949822
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| ||  | |||||||| |||||||||||||| ||||||||||         |||||||||||||||||| | |||||| ||    
T  6949958 accaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactatattttttttttgcagttttagtcctatctccatatttcaaa 6949859  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||          ||||||||| ||||||||||||||||||||||||    
T  6949858 ctc----------cagaaatgacagttttagtccaaccacctatgct 6949822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 22445741 - 22445816
Alignment:
Q  207 cagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||| |||||| ||||||| ||||| || |||| |||| |||||| |||||||||| |||||||||||||    
T  22445741 cagttttagtactatctccctattttcaacttcagaaacacacataaatgacagttttagtcaaaccacctatgct 22445816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 264
Target Start/End: Complemental strand, 31797291 - 31797166
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||| |||||||||||||||||  || ||| ||||||||||||| ||||| |||||||||||        ||||||||||||||| | |||||||| |||    
T  31797291 accagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatatg--ttttttgcagttttagtccta-cctcctattttcaa 31797195  T
Q  236 ctccataaacgcacagaaatgatagtttt 264  Q
    ||| | ||||||| |||||||| ||||||    
T  31797194 ctctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 282
Target Start/End: Original strand, 9329985 - 9330056
Alignment:
Q  210 ttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||||| | |||||||||||| | |||||||||||||||| ||||| ||| ||||||| ||||||    
T  9329985 ttttagtcctatctccttatttccaactctagaaacgcacagaaatgacagtttcagt-caaccacttatgct 9330056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 5035903 - 5035953
Alignment:
Q  144 acgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 194  Q
    |||||||||||| | ||||||||||||||||||||| ||||| ||||||||    
T  5035903 acgaaaatggtcctgtcttttttaaatcgaacaaaaccgtccctaaactat 5035953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 20495225 - 20495283
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 194  Q
    ||||||||||||||||| ||||  || ||||||||| ||||||||||||| ||||||||    
T  20495225 accaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaactat 20495283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 32418633 - 32418600
Alignment:
Q  163 ttttaaatcgaacaaaatcgtccttaaactatat 196  Q
    ||||||||||||||||||||||||||||||||||    
T  32418633 ttttaaatcgaacaaaatcgtccttaaactatat 32418600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 25336114 - 25336054
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatat 196  Q
    |||||||||||||| ||||| ||  | ||||||||||||||||||||||| |||| |||||    
T  25336114 accaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattatat 25336054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 3e-51; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 34555896 - 34555750
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||| ||||| |||||||||||    
T  34555896 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttgcagttttagtcatatctccctatttccaa 34555797  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  34555796 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 34555750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 21938597 - 21938739
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||| |||||||||||||    
T  21938597 caactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactatatgtttttt--gcagttttagtcctatctccctatttccaact 21938694  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  21938695 ccataaacgcacagaaatgacagttttagtccaaccacctatgct 21938739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 9992187 - 9992331
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||        |||||||||||||||||| |||||||||||    
T  9992187 accaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactatatgtttttt--gcagttttagtcctatctccctatttccaa 9992284  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||| ||||||||||| ||||||||||| ||||||||||||    
T  9992285 ctccagaaacacacagaaatgacagttttagtccgaccacctatgct 9992331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 136 - 280
Target Start/End: Complemental strand, 10279061 - 10278922
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| | ||| |||||    
T  10279061 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-----cagttttagtcctatctccatatatccaa 10278967  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||||| |||| ||||||||||| ||||||||||||||||| ||||    
T  10278966 ctccagaaacacacagaaatgacagttttagtccaaccacatatg 10278922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 30786803 - 30786948
Alignment:
Q  136 accaactcacgaaaat-ggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttcca 234  Q
    |||||||||||||||| |||| || || ||||||||||||||||||||||| |||||||||||        |||||||||||||||||| ||||||||||    
T  30786803 accaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttcca 30786900  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||    
T  30786901 actccataaacgcacagaaatgacggttttagtccaaccacttatgct 30786948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 16298714 - 16298858
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||        |||||||||||||||||| |||||||||||    
T  16298714 accaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctacctatttccaa 16298811  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||   ||||||| | |||||||||||||||||||||||||||||||    
T  16298812 ctctggaaacgcaaataaatgatagttttagtccaaccacctatgct 16298858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 44954740 - 44954596
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||| ||||||| ||||| |||||||||||| ||||||||| ||| |||||||||||        |||||||||||||||||| |||||||||||    
T  44954740 accaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactatatgtttttt--gcagttttagtcctatctccctatttccaa 44954643  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| |||||||||| |||||||||||||    
T  44954642 ctccagaaacgcacagaaatgacagttttagtcaaaccacctatgct 44954596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 17641883 - 17641734
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnn---gcagttttagtcctatcttcctatttc 232  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |            |||||||||||||||||| ||||||||    
T  17641883 accaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatttttatttttttttgcagttttagtcctatctccctatttc 17641784  T
Q  233 caactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  17641783 caactccagaaacgcacagaaatgacagttttagttcaaccacctatgct 17641734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 37421192 - 37421338
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||| |||||||| ||||| || || ||||||||||||||||||||||| |||||||||||        |||||||||||| ||| | |||||||||||    
T  37421192 accaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttgcagttttagtcatatttccctatttccaa 37421291  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| |||||||||| |||||||||||||    
T  37421292 ctccaaaaacgcacagaaatgacagttttagtctaaccacctatgct 37421338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 444065 - 443921
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| | |||||| || ||||||||||||||||||||| | |||||||||||        |||||||||||||||||| |||||||||||    
T  444065 accaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaactatatgtttttt--gcagttttagtcctatctccctatttccaa 443968  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
     ||||||||||| || |||||| ||||||||||||||||||||||||    
T  443967 ttccataaacgcgcataaatgacagttttagtccaaccacctatgct 443921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 142 - 280
Target Start/End: Complemental strand, 8230149 - 8230013
Alignment:
Q  142 tcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccat 241  Q
    ||||||||||||| ||| || ||||||||||||||||||||||| |||||||||||        |||||||||||| ||||  ||||||||||||||||     
T  8230149 tcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcatatccccctatttccaactccag 8230052  T
Q  242 aaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  8230051 aaacgcacagaaatgacagttttagtccaaccacctatg 8230013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 37505581 - 37505438
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| || |||||||| ||||||| | ||||||||||||| |||||||||||        |||||||||||||||||| ||||||| |||    
T  37505581 accaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaactatatgttttt---gcagttttagtcctatctccctattttcaa 37505485  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  37505484 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgct 37505438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 44954258 - 44954402
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||| ||||| ||||||        |||||||||||| |||||  || |||||||    
T  44954258 accaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtctttaaattatatgtttttt--gcagttttagtcgtatctctctgtttccaa 44954355  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  44954356 ctccagaaacgcacagaaatgacagttttagtccaaccacatatgct 44954402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 1837539 - 1837681
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||||||| || |||||||| |||||||||||||||||| |||| |||||||||||        |||||||||||| ||||| ||||||| |||||    
T  1837539 caactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactatatgtttttt--gcagttttagtcatatctccctattttcaact 1837636  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  1837637 ccagaaacgcacataaatgacagttttagtccaaccacctatgct 1837681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 34555438 - 34555557
Alignment:
Q  163 ttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagtt 262  Q
    ||||||||||||||||||||||| |||||||||||         ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  34555438 ttttaaatcgaacaaaatcgtccctaaactatatgttttttttacagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagtt 34555537  T
Q  263 ttagtccaaccacctatgct 282  Q
    ||||| ||||||| ||||||    
T  34555538 ttagttcaaccacatatgct 34555557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 37505099 - 37505232
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||| | ||||||| |||    
T  37505099 accaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatg-tttttttgcagttttagtcctatttccctattttcaa 37505197  T
Q  236 ctccataaacgcacagaaatgatagttttagtcca 270  Q
    ||||| ||| | |||||||||| ||||||||||||    
T  37505198 ctccaaaaatgaacagaaatgacagttttagtcca 37505232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 138 - 282
Target Start/End: Complemental strand, 44582571 - 44582427
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||        |||||||||||| | ||| ||||||| || ||    
T  44582571 caactcacgaaaatggtcatatcattttcaaatcgaacaaaatcgtctttaaactatatg-tttttttgcagttttagtcttgtctccctattttcagct 44582473  T
Q  238 cc-ataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    || | |||||||||||||||| ||||||||||||||||||||||||    
T  44582472 ccaaaaaacgcacagaaatgacagttttagtccaaccacctatgct 44582427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 50305299 - 50305152
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatat-gnnnnnnnngcagttttagtcctatcttcctatttcca 234  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||          |||||||||||| ||||| ||||||| ||    
T  50305299 accaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatatttttttttgcagttttagtcatatctccctattttca 50305200  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||| |||| |||||| ||||||| |||||| || ||||||    
T  50305199 actccataaacacacataaatgacagttttaatccaactacttatgct 50305152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 139 - 282
Target Start/End: Complemental strand, 9992666 - 9992525
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||        ||||| |||||||||||| ||||||| ||||||    
T  9992666 aactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaactatatg--ttttttgcagtattagtcctatctccctattttcaactc 9992569  T
Q  239 cataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    || ||||||  |||||||| ||||||| |||||||| |||||||    
T  9992568 cagaaacgcgtagaaatgacagttttaatccaaccatctatgct 9992525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 52336024 - 52335880
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||| |||| ||||| || || ||||||||||||||||||||||| ||||||||||         |||||||||||| ||||| |||||||||||    
T  52336024 accaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat--tttttttgcagttttagtcatatctccctatttccaa 52335927  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||| ||||||    
T  52335926 ctccagaaacgcacataaatgacagttttagtccaaccacatatgct 52335880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 10278580 - 10278725
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| || || || || ||||||||||||||||||||||| |||||||||||        |||||||||||||||||| || |||| |||    
T  10278580 accaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttt-gcagttttagtcctatctccccatttgcaa 10278678  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| | ||||||||||||||||||||||    
T  10278679 ctccagaaacgcacataaatgacaattttagtccaaccacctatgct 10278725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 142 - 280
Target Start/End: Original strand, 17641403 - 17641539
Alignment:
Q  142 tcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccat 241  Q
    ||||||||||||||||| ||||||||||||||||||||| || ||||||||||| |        | ||||||||| |||||| ||||||||||||||||     
T  17641403 tcacgaaaatggtcataccttttttaaatcgaacaaaattgttcttaaactatacgtttttt--gtagttttagttctatctccctatttccaactccag 17641500  T
Q  242 aaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||||||||| |||||| ||||||||| ||||||||||||    
T  17641501 aaacgcacataaatgacagttttagttcaaccacctatg 17641539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 279
Target Start/End: Complemental strand, 16299193 - 16299055
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||| ||||||||||| ||| |||||||| | ||||||||||||||||||||||||||        |||||||||||||||||| | |||||||||||    
T  16299193 caactcgcgaaaatggtcctattttttttaatt-gaacaaaatcgtccttaaactatatgtttttt--gcagttttagtcctatctccatatttccaact 16299097  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctat 279  Q
    ||| |||||||||||||||| | ||||||| |||||||||||    
T  16299096 ccagaaacgcacagaaatgacaattttagttcaaccacctat 16299055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 280
Target Start/End: Original strand, 4080053 - 4080195
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| || || || || ||||||||||||||||||||||| |||||||||||         ||||||||||| ||||| |||||||||||    
T  4080053 accaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaactatatgtttttta--cagttttagtcatatctccctatttccaa 4080150  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||| | ||||||||| |||||| |||||||||||||||| |||||    
T  4080151 ctctagaaacgcacaaaaatgacagttttagtccaaccatctatg 4080195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 272
Target Start/End: Original strand, 2867943 - 2868077
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||||||||| |||||||| |||||||||||||||||| ||| ||||||||||||        |||||||||||| ||| | ||||| || ||    
T  2867943 accaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaactatatg--ttttttgcagttttagtcatatttccctatctctaa 2868040  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaac 272  Q
    ||||| ||||||||| |||||| ||||||||||||||    
T  2868041 ctccaaaaacgcacataaatgacagttttagtccaac 2868077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 280
Target Start/End: Complemental strand, 2868222 - 2868080
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||| ||||||||||||| || || ||||||||||||||||||||||| || ||||||||        |||||||||||| ||||  |||||||||||    
T  2868222 accaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactatatgtttttt--gcagttttagtcatatccccctatttccaa 2868125  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||||| ||||||||| || ||| ||||||||||||||||| ||||    
T  2868124 ctccagaaacgcacataagtgacagttttagtccaaccacatatg 2868080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 23340215 - 23340359
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||  | ||||||||||         |||||||||||| ||||| | |||||||||    
T  23340215 accaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgctcataaactatat--attttttgcagttttagtcatatctccttatttccaa 23340312  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||| ||||||||| ||||||||| ||||||| ||||||    
T  23340313 ctccagaaacgctcagaaatgacagttttagttcaaccacatatgct 23340359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 6224754 - 6224875
Alignment:
Q  161 ttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatag 260  Q
    |||||||||||||||||||||||||||||| |||||          ||||||||||| |||||  ||||||||||||||| ||||||||| |||||| ||    
T  6224754 ttttttaaatcgaacaaaatcgtccttaaattatatatattttttacagttttagtcttatctctctatttccaactccagaaacgcacataaatgacag 6224853  T
Q  261 ttttagtccaaccacctatgct 282  Q
    |||||||| |||||||||||||    
T  6224854 ttttagtcaaaccacctatgct 6224875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 44582089 - 44582233
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||| |||||| ||||| || || ||||||||||||||||||||||  |||| ||||||        ||||||||||||||||||   | |||||||    
T  44582089 accaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaattatatgtttttt--gcagttttagtcctatctctttgtttccaa 44582186  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||||    
T  44582187 ctccataaacgcacataaatgacaattttagtccaaccacctatgct 44582233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 29439434 - 29439303
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||        |||| |||||||||||| ||||||||| ||||    
T  29439434 caactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttgcagatttagtcctatc-tcctatttcaaact 29439336  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    |          ||||||||| ||||||||||||||||||||||    
T  29439335 c----------cagaaatgacagttttagtccaaccacctatg 29439303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 30787310 - 30787251
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 197  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30787310 caactcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaactatatg 30787251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 1744427 - 1744500
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctat 279  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  1744427 gcagttttagtcatatctccctatttccaactccagaaacgcacataaatgacagttttagtccaaccacctat 1744500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 8229671 - 8229816
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnn-gcagttttagtcctatcttcctatttccaac 236  Q
    ||||||||||||||| |  ||  | |||||||||||| |||||||||  |||||||||||         |||||||||||||||||| |||||||| |||    
T  8229671 caactcacgaaaatgattctacatcttttaaatcgaataaaatcgtctctaaactatatgtttttttttgcagttttagtcctatctccctatttctaac 8229770  T
Q  237 tccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||| |||||||||||||||| |||||||||||||| || ||||||    
T  8229771 tccagaaacgcacagaaatgacagttttagtccaactacatatgct 8229816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 29438962 - 29439107
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||| ||||||| |||        ||||||||||||||||||  |||||| |||    
T  29438962 accaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactaaatg-tttttttgcagttttagtcctatctctctattttcaa 29439060  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
     || | |||| |||| |||| | ||||||||||||||||||||||||    
T  29439061 ttcaaaaaacacacaaaaataacagttttagtccaaccacctatgct 29439107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 37421459 - 37421397
Alignment:
Q  136 accaactcacgaaaatggtcatatctttttt-aaatcgaacaaaatcgtccttaaactatatg 197  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  37421459 accaactcacgaaaatggtcctatctttttttaaatcgaacaaaatcgtccttaaactatatg 37421397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 50926262 - 50926408
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||| |||||||||||  ||||| || ||| ||||||||||||||||||| ||||||||           ||||||||||||||  | |||||||| |||    
T  50926262 accagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaactatcatttttttttgcagttttagtccttacctcctattttcaa 50926361  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||| |||| ||||| |||||||||||||||||||||||||    
T  50926362 ctccagaaacacacataaatggtagttttagtccaaccacctatgct 50926408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 50304471 - 50304532
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 197  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||  |||||||||||    
T  50304471 accaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaactatatg 50304532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 282
Target Start/End: Complemental strand, 30787214 - 30787142
Alignment:
Q  210 ttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||| | ||||||| |||||||||||| ||| |||||||| |||||||||||||| |||||||||    
T  30787214 ttttagtcctatttccctattttcaactccataaatgcagagaaatgacagttttagtccaactacctatgct 30787142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 50926687 - 50926611
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||||||  |  ||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||||    
T  50926687 gcagttttagtccttaccccctattttcaactccataaacacacataaatggtagttttagtccaaccacctatgct 50926611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 9833666 - 9833522
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||| |||||  || ||| ||||||||||||||||||| |||| ||| |         ||||||||||||||| |  ||||||| |||    
T  9833666 accaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaaatat-tatgttttttgcagttttagtcctaccc-cctattttcaa 9833569  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||| | | ||||||||| ||||||||||||    
T  9833568 ctccagaaacgcacagaaataacatttttagtcctaccacctatgct 9833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 266
Target Start/End: Original strand, 39485102 - 39485224
Alignment:
Q  141 ctcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactcca 240  Q
    ||||||||||||||| || || ||| ||||||||||||||||||| |||||||||||        ||||||||||||||||| |||||||| ||||| ||    
T  39485102 ctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatg--ttttttgcagttttagtcctatc-tcctattttcaacttca 39485198  T
Q  241 taaacgcacagaaatgatagttttag 266  Q
     |||| || ||| |||| ||||||||    
T  39485199 gaaacacagagagatgacagttttag 39485224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 50304882 - 50304958
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||| ||||| |||||||| |||||||||||| |||| |||||  | ||||| ||||||||||||||||    
T  50304882 gcagttttagtcatatctccctatttcaaactccataaacacacaaaaatggcaattttaatccaaccacctatgct 50304958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 29021379 - 29021234
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||| |||||||||||| ||||  || ||| ||||||||||||||||||| |||| |||           |||||||||||| || |  ||||||| |||    
T  29021379 accagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaattatcacggttttttgcagttttagtcttaccc-cctattttcaa 29021281  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| |||||| |||||||||||||||||    
T  29021280 ctccagaaacgcacataaatgacagtttttgtccaaccacctatgct 29021234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 45048187 - 45048314
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||| |||||||||||  || || |||||||| |||||||||||||| |||||||||||        ||||||||||||||| | || ||||| |||    
T  45048187 accaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactatatg--ttttttgcagttttagtccta-cctcatattttcaa 45048283  T
Q  236 ctccataaacgcacagaaatgatagttttag 266  Q
    ||||| ||||||| |||||| | ||||||||    
T  45048284 ctccagaaacgcatagaaataacagttttag 45048314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 29020923 - 29020966
Alignment:
Q  147 aaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaa 190  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||    
T  29020923 aaaatggtcatgtctcttttaaatcgaacaaaatcatccttaaa 29020966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 50419422 - 50419473
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtcctt 187  Q
    |||||||||| ||||||||||| ||||||| |||||||||||| | ||||||    
T  50419422 accaactcacaaaaatggtcatgtctttttcaaatcgaacaaagtagtcctt 50419473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 23526777 - 23526833
Alignment:
Q  225 cctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||| |||||||| |||||||||||||||| || |||||| |||||| |||||||    
T  23526777 cctattttcaactccaaaaacgcacagaaatgacag-tttagtacaaccatctatgct 23526833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 23527039 - 23526986
Alignment:
Q  141 ctcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 194  Q
    |||| ||||||||||||  |||||||||||||||||||| ||||  ||||||||    
T  23527039 ctcatgaaaatggtcatgccttttttaaatcgaacaaaaccgtctctaaactat 23526986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 44291825 - 44291777
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtc 184  Q
    |||| |||| |||||||||||| ||| |||||||||||| |||||||||    
T  44291825 accagctcatgaaaatggtcatgtctcttttaaatcgaataaaatcgtc 44291777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 7e-49; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 9181564 - 9181708
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||| |||||||||||    
T  9181564 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat--tttttttgcagttttagtcctatctccctatttccaa 9181661  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  9181662 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 9181708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 25637712 - 25637568
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||    
T  25637712 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt--gcagttttagtcctatctccctatttccaa 25637615  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  25637614 ctccagaaacacacagaaatgacagttttagtccaaccacctatgct 25637568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 48248106 - 48247961
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||| |||| |||||||||||    
T  48248106 accaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt-gcagttttagtcccatctccctatttccaa 48248008  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  48248007 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 48247961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 136 - 280
Target Start/End: Original strand, 786814 - 786957
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||        |||||||||||||||||| |||||||||||    
T  786814 accaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactatatgttttttt-gcagttttagtcctatctccctatttccaa 786912  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||    
T  786913 ctccataaacgcacagaagtgacagttttagttcaaccacctatg 786957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 138 - 282
Target Start/End: Complemental strand, 27245716 - 27245574
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||        ||| |||||||| ||||| |||||||||||||    
T  27245716 caactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaattatatgtatttt--gcaattttagtcatatctccctatttccaact 27245619  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||    
T  27245618 ccagaaacgcacagaaatcatagttttagtccaaccacctatgct 27245574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 5745671 - 5745815
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||        |||||||||||| ||||| ||||||||| |    
T  5745671 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatctttcttaaactatatg--ttttttgcagttttagtcttatctccctatttccta 5745768  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  5745769 ctccagaaacgcacataaatgacagttttagtccaaccacctatgct 5745815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 28688013 - 28687869
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| || ||||| || ||||||||||||||||||||||| |||||||||||        ||| ||||||||||||||||||||||||||    
T  28688013 accaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcacttttagtcctatcttcctatttccaa 28687916  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  28687915 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28687869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 7732522 - 7732664
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||||||| ||||| || || |||||||||||||||||||||||||||||||||||        |||||||||||||||||| ||||||| |||||    
T  7732522 caactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttt--gcagttttagtcctatctccctattttcaact 7732619  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||    
T  7732620 ccataaacgcacataaatgacagttttagtccaaccacctatgct 7732664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 15712397 - 15712541
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||         | |||||||||||||||| |||||||||||    
T  15712397 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat--attttttgtagttttagtcctatctccctatttccaa 15712494  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| | ||||||||| |||||| ||||||||||||||||| ||||||    
T  15712495 ctctagaaacgcacataaatgacagttttagtccaaccacatatgct 15712541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 16081331 - 16081475
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| ||        |||||||||||||||||| |||||||||||    
T  16081331 accaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatttgtttttt--gcagttttagtcctatctacctatttccaa 16081428  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||| ||||||||||| ||||||||||||||||| ||||||    
T  16081429 ctccaaaaacacacagaaatgacagttttagtccaaccacatatgct 16081475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 136 - 280
Target Start/End: Complemental strand, 14311801 - 14311659
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||        |||||||||||| ||||| |||||||||||    
T  14311801 accaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgtttttt--gcagttttagtcttatctccctatttccaa 14311704  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||| | |||||||||||||||| | ||||||||||||||||||||    
T  14311703 ctctagaaacgcacagaaatgacaattttagtccaaccacctatg 14311659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 7733001 - 7732857
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||        ||| |||||||||||||| ||||||| |||    
T  7733001 accaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcaattttagtcctatctccctattttcaa 7732904  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||| |||||||||| | | || |||||||||||||||||||    
T  7732903 ctccataaatgcacagaaataacaattctagtccaaccacctatgct 7732857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 27245235 - 27245380
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || |||||||||||||||||||||||  |||| |||||        |||||||||||||||||| | |||||||||    
T  27245235 accaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatgttttttt-gcagttttagtcctatctccttatttccaa 27245333  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  27245334 ctccagaaacgcacagaaatgatagttttagtccaaccacctatgct 27245380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 140 - 282
Target Start/End: Original strand, 11971370 - 11971514
Alignment:
Q  140 actcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg--nnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||| ||||||||||| |    
T  11971370 actcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttttacagttttagtcctatctccctatttccaatt 11971469  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    | | |||| |||| |||||| ||||||||||||||||||||||||    
T  11971470 ctagaaacacacataaatgacagttttagtccaaccacctatgct 11971514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 9181926 - 9181779
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngc-agttttagtcctatcttcctatttcca 234  Q
    ||||| |||||||| || ||||| || ||||||||||||||||||||||| |||||||||||         | |||||||||||||||| ||||||||||    
T  9181926 accaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttttccagttttagtcctatctccctatttcca 9181827  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  9181826 actccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 9181779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 26026826 - 26026688
Alignment:
Q  142 tcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccat 241  Q
    |||||||||||||| |||||||| |||||||||||||| | |||||||||||||||        |||||||||||  ||||| ||||||||||||||||     
T  26026826 tcacgaaaatggtcctatcttttataaatcgaacaaaaccatccttaaactatatgtttttt--gcagttttagttttatctccctatttccaactccaa 26026729  T
Q  242 aaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  26026728 aaacgcatagaaatgacagttttagtccaaccacctatgct 26026688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 26026349 - 26026494
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||| ||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||        |||||||||||| ||||| ||||||| |||    
T  26026349 accagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactatatgttttttt-gcagttttagtcttatctccctattttcaa 26026447  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||| ||||||| ||||||    
T  26026448 ctccagaaacgcacagaaatgacagttttagttcaaccacatatgct 26026494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 35161316 - 35161171
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||| || ||||| || || ||||||||||||||||||||||| |||||||||||        |||||||||||| ||||| |||||||||||    
T  35161316 accaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttt-gcagttttagtcatatctccctatttccaa 35161218  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||||||| ||||||||||||| | || ||||||||||||    
T  35161217 ctccataaacgcacataaatgatagttttgggccgaccacctatgct 35161171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 280
Target Start/End: Complemental strand, 16081813 - 16081671
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| || || || || ||||||||||||||||||| ||| |||||||||||        |||||||||||||||||| |||||||||||    
T  16081813 accaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttt--gcagttttagtcctatctccctatttccaa 16081716  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||||| ||||||||| |||||| ||||||||||||||||| ||||    
T  16081715 ctccaaaaacgcacaaaaatgacagttttagtccaaccacttatg 16081671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 24929822 - 24929673
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnn---gcagttttagtcctatcttcctatttc 232  Q
    |||||||||||||| ||||| || || ||||||||| ||||||||||||| ||||||||||            |||||||||||||||||| ||||||||    
T  24929822 accaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactatatatatttttttttgcagttttagtcctatctccctatttc 24929723  T
Q  233 caactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  24929722 caactccaaaaacgcacagaaatgacagttttagtccaacgacctatgct 24929673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 280
Target Start/End: Complemental strand, 26048460 - 26048319
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||| |||||||| ||||||||||||||||        |||||||||||| ||||| |||||||||||    
T  26048460 accaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactatatgttttt---gcagttttagtcatatctccctatttccaa 26048364  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||||| ||| ||||| |||||| ||||||||||||||||||||||    
T  26048363 ctccaaaaatgcacataaatgacagttttagtccaaccacctatg 26048319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 263
Target Start/End: Original strand, 28687625 - 28687750
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||||||    
T  28687625 accaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactatat--tttttttgcagttctagtcctatcttcctatttccaa 28687722  T
Q  236 ctccataaacgcacagaaatgatagttt 263  Q
    ||||| ||||||||| |||||| |||||    
T  28687723 ctccagaaacgcacataaatgacagttt 28687750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 26047989 - 26048124
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagt-cctatcttcctatttcca 234  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||            |||||  | ||||| | ||||||||||    
T  26047989 accaactcacgaaaatggtcatatcttttttaaatcgaataaaattgtccttaaactatat------------gttttgttgcctatgtccctatttcca 26048076  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  26048077 actccagaaacgcacagaaatgacagttttagtccaaccacctatgct 26048124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 787300 - 787152
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnn--gcagttttagtcctatcttcctatttcc 233  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||| |||||||| ||          | |||||||||| ||||||| ||||| |    
T  787300 accaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatttgtttttaatttgtagttttagtcttatcttcatattttc 787201  T
Q  234 aactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||| ||||||||| |||||||||||||||||||||||| ||||||    
T  787200 aactccagaaacgcacataaatgatagttttagtccaaccacatatgct 787152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 25637229 - 25637374
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||| |||| ||||| || || ||||||||||||||||||||||| |||||||||||        | |||||||||||||||| |||||||||||    
T  25637229 accaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttt-gtagttttagtcctatctccctatttccaa 25637327  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| |||||||  |||||||||||||||    
T  25637328 ctccagaaacgcacataaatgacagttttaagccaaccacctatgct 25637374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 5746128 - 5746009
Alignment:
Q  163 ttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagtt 262  Q
    ||||||||||||||||| ||||| |||||||||||        ||| |||||||| ||||| |||||||||||||||||||||||||| |||||| ||||    
T  5746128 ttttaaatcgaacaaaaccgtccataaactatatgttttttttgcaattttagtcttatctccctatttccaactccataaacgcacataaatgacagtt 5746029  T
Q  263 ttagtccaaccacctatgct 282  Q
    ||||||||| ||||||||||    
T  5746028 ttagtccaatcacctatgct 5746009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 48247621 - 48247767
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnn--gcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||| ||||| || || ||||||||| ||||||||||||| |||| |||||           |||||||||||| ||||| |||||||||||    
T  48247621 caactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagtatatattttttttttgcagttttagtcatatctccctatttccaa 48247720  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  48247721 ctccaaaaacgcacagaaatgacagttttagtccaaccacctatgct 48247767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 11973848 - 11973772
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||| |||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||    
T  11973848 gcagttttagttctatcttcctatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgct 11973772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 14311347 - 14311492
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||  ||| |||| ||| || |||||||| ||| |||||||||| |||||||||||         |||||||| |||||||| |||||||||||    
T  14311347 accaactcataaaattggttatacctcttttaaattgaataaaatcgtccctaaactatatgttttttta-cagttttaatcctatctccctatttccaa 14311445  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||| |||| |||||| ||||||||||||||||||||||||    
T  14311446 ctccataaacacacataaatgacagttttagtccaaccacctatgct 14311492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 39388782 - 39388636
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| | ||| || || ||||||||||||||||||||||  |||||||||||        |||||||||||||||||| ||||||| |||    
T  39388782 accaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgttttttt-gcagttttagtcctatctccctattttcaa 39388684  T
Q  236 ctccataaacgcac-agaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||| | |||||| ||||||||||||||||| ||||||    
T  39388683 ctccaaaaacgcacaaaaaatgacagttttagtccaaccacatatgct 39388636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 16917745 - 16917806
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16917745 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg 16917806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 138 - 283
Target Start/End: Complemental strand, 2758210 - 2758067
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||||||||||||  || || ||||||||||||||||||||||| |||||||||||        |||| ||||||| ||||  |||||||| ||||    
T  2758210 caactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatg--ttttttgcaggtttagtcatatccccctatttctaact 2758113  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgcta 283  Q
    ||| ||||||| | |||||| ||||||||||||||||| |||||||    
T  2758112 ccagaaacgcatataaatgacagttttagtccaaccacttatgcta 2758067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 34595286 - 34595142
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnnnnngcagttttagtcctatcttcctatttcca 234  Q
    |||||||||||||||||||| |   | ||||||||||||||||||||||| |||||||| |||        ||||||||||| ||| |  | ||||| ||    
T  34595286 accaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatgttttt---gcagttttagtgctacccccttattttca 34595190  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||||    
T  34595189 actccagaaacgcacagaaatgacagttttagtccaaccacccatgct 34595142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 281
Target Start/End: Original strand, 35160906 - 35160976
Alignment:
Q  210 ttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgc 281  Q
    |||||||||||||| ||||||| |||||||| |  |||||||||||||||||||||||||||||||||||||    
T  35160906 ttttagtcctatctccctattttcaactccagag-cgcacagaaatgatagttttagtccaaccacctatgc 35160976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 5333912 - 5333973
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 197  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||    
T  5333912 accaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactatatg 5333973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 266
Target Start/End: Complemental strand, 9394244 - 9394117
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||| ||||| ||||||||| || |||||| ||||||||||||| ||||| ||||||||||         |||||||||||||||||| |||||||||||    
T  9394244 accagctcacaaaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaactatat--attttttgcagttttagtcctatct-cctatttccaa 9394148  T
Q  236 ctccataaacgcacagaaatgatagttttag 266  Q
    || || |||| || |||||||| ||||||||    
T  9394147 cttcaaaaacacaaagaaatgacagttttag 9394117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 5334333 - 5334273
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatat 196  Q
    |||||||||||||||| ||| || || ||||||||||||||||||||||| ||||||||||    
T  5334333 accaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactatat 5334273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 34594683 - 34594758
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||||||| |  ||||||| |||||| | ||||  ||| |||||||||||||||||||||||||||||||    
T  34594683 gcagttttagtcctaccc-cctattttcaactcgagaaacaaacataaatgatagttttagtccaaccacctatgct 34594758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 35160685 - 35160746
Alignment:
Q  136 accaactcacgaaaatggtcata--tcttttttaaatcgaacaaaatcgtccttaaactata 195  Q
    |||||||||||||||||||||||  | ||||||||||||||| ||||||| |||||| ||||    
T  35160685 accaactcacgaaaatggtcatattttttttttaaatcgaactaaatcgttcttaaattata 35160746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 5184498 - 5184545
Alignment:
Q  210 ttttagtcctatcttcctatttccaactccataaacgcacagaaatga 257  Q
    |||||||| ||||| |||||||||||||||| ||| ||||||||||||    
T  5184498 ttttagtcttatctccctatttccaactccaaaaatgcacagaaatga 5184545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 39137042 - 39136991
Alignment:
Q  141 ctcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaact 192  Q
    ||||||||||||||| |  || ||||||||||||||||||||||| ||||||    
T  39137042 ctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaact 39136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 49064228 - 49064176
Alignment:
Q  142 tcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 194  Q
    ||||||||||||||||  || ||| ||||||||||||||||||  ||||||||    
T  49064228 tcacgaaaatggtcatgactctttcaaatcgaacaaaatcgtcaataaactat 49064176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 25472527 - 25472382
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| ||||||||||     
T  25472527 accaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt-gcagttttagtcctatctccctatttccag 25472429  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  25472428 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 25472382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 5114502 - 5114644
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||||    
T  5114502 caactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt--gcagttttagtcctatctccctatttccaact 5114599  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| |||| ||||||||||| ||||||||| ||||||||||||||    
T  5114600 ccagaaacacacagaaatgacagttttagttcaaccacctatgct 5114644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 138 - 282
Target Start/End: Complemental strand, 24640697 - 24640555
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||| ||||| |||||||||||||    
T  24640697 caactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcagttttagtcttatctccctatttccaact 24640600  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||  |||||||||||||||| |||| |||||||||||||||||||    
T  24640599 ccgaaaacgcacagaaatgacagttctagtccaaccacctatgct 24640555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 25468881 - 25469027
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||        |||||||||||||||||| |||||||  ||    
T  25468881 accaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactatatgtttttcttgcagttttagtcctatctccctattttaaa 25468980  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
     |||| |||||||||||||||| ||||||| ||||||||||||||||    
T  25468981 ttccagaaacgcacagaaatgacagttttattccaaccacctatgct 25469027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 31073656 - 31073512
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||| ||||||||| |||||||| || |||||||||||||||||| |||| |||||||||||        |||||||||||||||||| |||||||||||    
T  31073656 accagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatgttttgt--gcagttttagtcctatctccctatttccaa 31073559  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  31073558 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 31073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 136 - 279
Target Start/End: Complemental strand, 30251206 - 30251064
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||        | |||||||||| ||||| |||||||||||    
T  30251206 accaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaactatttgtattttt-gtagttttagtcttatctccctatttccaa 30251108  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctat 279  Q
    ||||| |||||||||||||||| || ||||||||||||||||||    
T  30251107 ctccagaaacgcacagaaatgacagatttagtccaaccacctat 30251064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 164 - 279
Target Start/End: Complemental strand, 29891566 - 29891453
Alignment:
Q  164 tttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttt 263  Q
    ||||||| ||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  29891566 tttaaattgaacaaaatcgtccttaaactatatgtttttt--gcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgatagttt 29891469  T
Q  264 tagtccaaccacctat 279  Q
    ||||||||||||||||    
T  29891468 tagtccaaccacctat 29891453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 31573752 - 31573901
Alignment:
Q  136 accaactcacgaaaatggtcatatctttttt-aaatcgaacaaaatcgtccttaaactatatgnnnnnnnn--gcagttttagtcctatcttcctatttc 232  Q
    |||||||||||||||| ||| ||| |||||| ||||||||||||||||| |||||||||||||          |||||||||||||||||| ||||||||    
T  31573752 accaactcacgaaaatagtcctatttttttttaaatcgaacaaaatcgttcttaaactatatgttttttttttgcagttttagtcctatctccctatttc 31573851  T
Q  233 caactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  31573852 caactccagaaacgcatagaaatgacagttttagtccaaccacctatgct 31573901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 31574239 - 31574095
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| | |||||| || ||||||||||||||||||||||| |||||||||||        |||||||||||| ||||| ||||||| |||    
T  31574239 accaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcatatctccctattttcaa 31574142  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| | ||||||||||||||||||||||    
T  31574141 ctccagaaacgcacataaatgacaattttagtccaaccacctatgct 31574095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 136 - 273
Target Start/End: Complemental strand, 5120983 - 5120848
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| |  || || || ||||||||||||||||||||||| |||||||||||        |||||||||||||||||| |||||||||||    
T  5120983 accaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttccaa 5120886  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaacc 273  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  5120885 ctccataaacgcacagaaatgacagttttaatccaacc 5120848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 206 - 282
Target Start/End: Complemental strand, 28636642 - 28636566
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  28636642 gcagttttagtcttatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28636566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 139 - 282
Target Start/End: Original strand, 29891115 - 29891256
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    |||| |||||| || ||||| || ||||||| ||||||||| ||||| |||||||||||         || ||||| | |||||| ||||||||||||||    
T  29891115 aacttacgaaattgatcatacctcttttaaaccgaacaaaagcgtccctaaactatatgtttttta--caattttaattctatctccctatttccaactc 29891212  T
Q  239 cataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    || ||||||||| |||||| ||||||||||||||||||||||||    
T  29891213 cagaaacgcacataaatgacagttttagtccaaccacctatgct 29891256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 28636324 - 28636435
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| ||  | ||||||||||||||||||||| | |||||||||||        |||||||||||| ||||| |||||||||||    
T  28636324 accaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaactatatg---tttttgcagttttagtcatatctccctatttccaa 28636420  T
Q  236 ctccataaacgcaca 250  Q
    ||||||||| |||||    
T  28636421 ctccataaatgcaca 28636435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 246
Target Start/End: Original strand, 31073175 - 31073290
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatc------gtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctat 229  Q
    |||||| || |||||||||| |||||||||||||||||||||||||      |||||||||||||||         |||||||||||| |||||||||||    
T  31073175 accaacacatgaaaatggtcctatcttttttaaatcgaacaaaatcgtttaagtccttaaactatat-tattttttgcagttttagtcatatcttcctat 31073273  T
Q  230 ttccaactccataaacg 246  Q
    ||||||||||| |||||    
T  31073274 ttccaactccagaaacg 31073290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 30250791 - 30250867
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||| ||||||||  ||| ||||||||||||| || |||||||||||||||| ||||||||||||| ||| ||||||    
T  30250791 gcagctttagtccattctccctatttccaactacagaaacgcacagaaatgacagttttagtccaatcacttatgct 30250867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 11523786 - 11523854
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccac 275  Q
    ||||||||||||||| || | ||||| |||||||||||||||||| ||||   |||| ||||||||||||    
T  11523786 gcagttttagtcctacct-catattttcaactccataaacgcacaaaaattgcagttctagtccaaccac 11523854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 18297703 - 18297662
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaa 177  Q
    |||||||||||||| ||||||| |||||||||||| ||||||    
T  18297703 accaactcacgaaattggtcatctcttttttaaattgaacaa 18297662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 32836510 - 32836449
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 197  Q
    |||| |||||||||||||||||  || ||| ||||||||||||| ||| |||||||| ||||    
T  32836510 accagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgtatg 32836449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 3e-48; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 51473370 - 51473225
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||    
T  51473370 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt-gcagttttagtcctatctccctatttccaa 51473272  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  51473271 ctccaaaaacgcacataaatgacagttttagtccaaccacctatgct 51473225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 136 - 284
Target Start/End: Original strand, 55389637 - 55389783
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||    
T  55389637 accaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactatatgtttttt--gcagttttagtcctatctccctatttccaa 55389734  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgctac 284  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  55389735 ctccagaaacgcacagaaatgacagttttagttcaaccacctatgctac 55389783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 41998261 - 41998406
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||| ||||| |||||||||||    
T  41998261 accaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt-gcagttttagtcatatctccctatttccaa 41998359  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  41998360 ctccataaacgaacagaaatgacagttttagtccaaccacctatgct 41998406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 139 - 282
Target Start/End: Complemental strand, 50662923 - 50662782
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| || ||||||| ||||||    
T  50662923 aactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt--gcagttttagtcctagctccctattttcaactc 50662826  T
Q  239 cataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    || |||||||||||||||| ||||||||||||||||||||||||    
T  50662825 cagaaacgcacagaaatgacagttttagtccaaccacctatgct 50662782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 43678327 - 43678471
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||| ||||| |||||||||||    
T  43678327 accaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcagttttagtcttatctccctatttccaa 43678424  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| || |||||| |||||| ||||||||||||||||||||||||    
T  43678425 ctccagaagcgcacataaatgacagttttagtccaaccacctatgct 43678471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 47431728 - 47431873
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||        |||||||||||||||||| |||||||| ||    
T  47431728 accaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactatatgttttttt-gcagttttagtcctatctccctatttctaa 47431826  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  47431827 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 47431873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 49951578 - 49951722
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        ||| |||||||||||||| |||||||||||    
T  49951578 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcaattttagtcctatctccctatttccaa 49951675  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||||||| |||| | ||||||||||||||||| ||||||    
T  49951676 ctccataaacgcacataaataacagttttagtccaaccacatatgct 49951722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 51828472 - 51828327
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||        |||||||||||||||||| |||||||||||    
T  51828472 accaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactatatgttttttt-gcagttttagtcctatctccctatttccaa 51828374  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||| |||||||| |||||||||||||| |||||||||    
T  51828373 ctccagaaacgcatagaaatgacagttttagtccaactacctatgct 51828327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 138 - 282
Target Start/End: Complemental strand, 51829052 - 51828910
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||        |||||||||||||||||| |||||||||||||    
T  51829052 caactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactatatgtttttt--gcagttttagtcctatctccctatttccaact 51828955  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
     |||||||||||| |||||| ||||||||||||||||||||||||    
T  51828954 tcataaacgcacataaatgacagttttagtccaaccacctatgct 51828910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 32730903 - 32730759
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||        ||||||||| |||||||| |||||||| ||    
T  32730903 accaactcaagaaaatggtcctatcttttttaaattgaacaaaatcgtccttaaactatatgtttttt--gcagttttaatcctatctccctatttcaaa 32730806  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  32730805 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 32730759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 44676986 - 44676842
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||| ||||||||||||||  |||||| |||    
T  44676986 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcaattttagtcctatctctctattttcaa 44676889  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| |||||||||| |||||||||||||    
T  44676888 ctccagaaacgcacataaatgacagttttagtctaaccacctatgct 44676842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 46013937 - 46013792
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||    
T  46013937 accaactcccaaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt-gcagttttagtcctatctccctatttccaa 46013839  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  46013838 ctccagaaacgcacataaatgacagttttagtccaaccacctatgct 46013792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 136 - 273
Target Start/End: Complemental strand, 16701306 - 16701168
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-nnnnnnnngcagttttagtcctatcttcctatttcca 234  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||         |||||||||||| ||||| ||||||||||    
T  16701306 accaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaactatatgtttttttttgcagttttagtcatatctccctatttcca 16701207  T
Q  235 actccataaacgcacagaaatgatagttttagtccaacc 273  Q
    ||||||||||||||  ||||| | |||||||||||||||    
T  16701206 actccataaacgcatcgaaattacagttttagtccaacc 16701168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 136 - 279
Target Start/End: Original strand, 40838684 - 40838825
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||||| |||||||||||        |||||||||||| ||||  |||||||||||    
T  40838684 accaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactatatgtttttt--gcagttttagtcatatccccctatttccaa 40838781  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctat 279  Q
    ||||| |||||||||||||||| |||||||||||||||||||||    
T  40838782 ctccagaaacgcacagaaatgacagttttagtccaaccacctat 40838825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 330350 - 330206
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| || |||||||||||| ||||||||||||| |||||||||||        |||||||||||| ||||| |||||||||||    
T  330350 accaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcatatctccctatttccaa 330253  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| | |||||||||||||||| ||||||| ||||||||||||||||    
T  330252 ctctagaaacgcacagaaatgacagttttaatccaaccacctatgct 330206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 2051327 - 2051475
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg--nnnnnnnngcagttttagtcctatcttcctatttcc 233  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||          ||||||||| |||||| | ||||||||     
T  2051327 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgttcttaaactatatgttttttttttgcagttttattcctatttccctatttct 2051426  T
Q  234 aactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  2051427 aactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 2051475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 274
Target Start/End: Original strand, 38535341 - 38535477
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||        ||||||| |||||||||| |||||||||||    
T  38535341 accaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcagtttcagtcctatctccctatttccaa 38535438  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaacca 274  Q
    ||||| ||||||||| |||||| ||||||||| ||||||    
T  38535439 ctccaaaaacgcacataaatgacagttttagttcaacca 38535477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 55390111 - 55389967
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||| |||||||||||||| || |||||||||||| ||||||||||||  |||||||||||        | ||||||||||||| || |||||||||||    
T  55390111 accaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactatatgtttttt--gtagttttagtcctacctccctatttccaa 55390014  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  55390013 ctccataaacgcacagaaatgacagttttagtccaaccacctatgct 55389967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 40275125 - 40275271
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| || || |||||||||||||||||| |||| |||||| ||||        |||||||||||||||||| | |||||| ||    
T  40275125 accaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatgttttttttgcagttttagtcctatctccatatttctaa 40275224  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  40275225 ctccagaaacgcacagaaatgacagttttagtccaaccacatatgct 40275271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 282
Target Start/End: Complemental strand, 40839163 - 40839022
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    ||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||        |||||||||||||||||| |||||||| |||||    
T  40839163 aactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttctaactc 40839066  T
Q  239 cataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    || |||||||||||||||| |||||||||||||| || ||||||    
T  40839065 cagaaacgcacagaaatgacagttttagtccaactacatatgct 40839022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 51827989 - 51828133
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||        ||| |||||||||||||| ||||||| |||    
T  51827989 accaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcatttttagtcctatctccctattttcaa 51828086  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  51828087 ctccagaaacgcacataaatgacagttttagtccaaccacctatgct 51828133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 52236854 - 52236992
Alignment:
Q  142 tcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccat 241  Q
    ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||        |||||||||||| ||||  ||||||| ||||||||     
T  52236854 tcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcatatccccctattttcaactccag 52236951  T
Q  242 aaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  52236952 aaacgcacagaaatgacagttttagtccaatcacctatgct 52236992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 34104670 - 34104813
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||||| ||||||||||||        |||||||||||| |||| |||||||||||     
T  34104670 accaactcacgaaaatggttctatcttttttaaattgaacaaaatcgtcattaaactatatg--ttttttgcagttttagtcatatc-tcctatttccag 34104766  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| | ||||||||||||||||||||||    
T  34104767 ctccagaaacgcacaaaaatgacatttttagtccaaccacctatgct 34104813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 46013454 - 46013598
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||||| |||| ||||||        |||||||||||| ||||| ||||||| |||    
T  46013454 accaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgtttttt--gcagttttagtcatatctccctattttcaa 46013551  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| ||||||  |||||||||||||||||||||||    
T  46013552 ctccagaaacgcacataaatgacggttttagtccaaccacctatgct 46013598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 49952060 - 49951916
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || |||||||||||||||||||||| |||||||| |||        |||||||||||| ||||| ||||||| |||    
T  49952060 accaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaactacatgtttttt--gcagttttagtcatatctccctattttcaa 49951963  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  49951962 ctccagaaacgcacataaatgacagttttagtccaaccacctatgct 49951916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 282
Target Start/End: Original strand, 51828579 - 51828716
Alignment:
Q  144 acgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccataa 243  Q
    |||||| ||||| || || ||||||||||||||||||||||| |||||||||||        |||||||||||||||||| |||||||||||||||| ||    
T  51828579 acgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactatatgttttttt-gcagttttagtcctatctccctatttccaactccagaa 51828677  T
Q  244 acgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||| |||||| |||||||||||||||| |||||||    
T  51828678 acgcacaaaaatgacagttttagtccaaccatctatgct 51828716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 52375845 - 52375701
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| || || |||||||| |||||||||||||| |||||||||||        |||||||||||| |||   |||||||||||    
T  52375845 accaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactatatgtttttt--gcagttttagtcatattcccctatttccaa 52375748  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  52375747 ctccagaaacgcacagaaatgacagttttagtccaaccacttatgct 52375701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 34105137 - 34105018
Alignment:
Q  163 ttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagtt 262  Q
    ||||||||||||||||||||||| |||||||||||        ||||||||||||| |||| | ||||||||||| || |||||||||||||||| ||||    
T  34105137 ttttaaatcgaacaaaatcgtccctaaactatatgttttttttgcagttttagtcccatctccttatttccaacttcagaaacgcacagaaatgacagtt 34105038  T
Q  263 ttagtccaaccacctatgct 282  Q
    ||||||||||||||||||||    
T  34105037 ttagtccaaccacctatgct 34105018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 240
Target Start/End: Complemental strand, 49720875 - 49720773
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||| ||||| |||||||||||    
T  49720875 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcagttttagtcttatctccctatttccaa 49720778  T
Q  236 ctcca 240  Q
    |||||    
T  49720777 ctcca 49720773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 280
Target Start/End: Complemental strand, 52237331 - 52237189
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||| |||| ||||||        |||||||||||||||||| |||||||| ||    
T  52237331 accaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatgtttttt--gcagttttagtcctatctccctatttctaa 52237234  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||||  |||||||||||||||| |||||||||| |||||| ||||    
T  52237233 ctccggaaacgcacagaaatgacagttttagtcaaaccacatatg 52237189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 25534922 - 25535067
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtcct-taaactatatgnnnnnnnngcagttttagtcctatcttcctatttcca 234  Q
    ||||| ||| |||||||||| || || |||||||||||||||||||||||  |||| ||||||        |||||||||||||||||| ||||||||||    
T  25534922 accaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccctaaattatatgtttttt--gcagttttagtcctatctccctatttcca 25535019  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  25535020 actccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 25535067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 139 - 282
Target Start/End: Original strand, 30513757 - 30513898
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||        |||||||||||| ||||| | |||||| ||||     
T  30513757 aactcacgaaaatggtcctatcttttttaaatcgaataaaatcgtc-ttaaactatatgtttttct-gcagttttagtcatatctccatatttcgaactt 30513854  T
Q  239 cataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    || |||||||||||||||| |||||||||||| |||||||||||    
T  30513855 cagaaacgcacagaaatgacagttttagtccagccacctatgct 30513898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 51472955 - 51473029
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  51472955 gcagttttagtcctatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatg 51473029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 40275607 - 40275464
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||  |||||||||||        |||||||||||| ||||  |||||||||||    
T  40275607 accaactcacgaaa-tggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttttt--gcagttttagtcatatccccctatttccaa 40275511  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  40275510 ctccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 40275464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 49720403 - 49720547
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||| |||| |||| |        |||||||||||||||||| | |||||| ||    
T  49720403 accaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtatacgtttttt--gcagttttagtcctatctccttatttctaa 49720500  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  49720501 ctccagaaacgcacataaatgacagttttagtccaaccacctatgct 49720547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 52375359 - 52375503
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||| ||||||||||||||||| || |||||||| |||||||||||||| |||||||||||        ||||||||||| |||||| |||||||| ||    
T  52375359 accaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactatatgtttttt--gcagttttagttctatctccctatttctaa 52375456  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||| |||||||| |||||||||| |||||| ||||||    
T  52375457 ctccagaaacgcatagaaatgacagttttagtctaaccacatatgct 52375503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 329878 - 329984
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| ||| |||||||    
T  329878 accaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcagttttagtcctatctccctgtttccaa 329975  T
Q  236 ctccataaa 244  Q
    |||||||||    
T  329976 ctccataaa 329984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 136 - 280
Target Start/End: Original strand, 2044303 - 2044445
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||||| |||| ||||||        | |||||||||| ||||| |||||||||||    
T  2044303 accaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattatatgtttttt--ggagttttagtcatatctccctatttccaa 2044400  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||| | ||||||||| |||| | ||||||||||||||||||||||    
T  2044401 ctcaagaaacgcacataaataacagttttagtccaaccacctatg 2044445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 276
Target Start/End: Original strand, 14654231 - 14654361
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||        ||| ||||||        ||||||||||||    
T  14654231 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatg--ttttttgcatttttag--------tcctatttccaa 14654320  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacc 276  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  14654321 ctccgtaaacgcacagaaatgacagttttagtccaaccacc 14654361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 280
Target Start/End: Complemental strand, 38535809 - 38535667
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||| |||||| | |||  |||| |||||||||||| |||||||||| |||||||||||        |||||||||||||||||| |||||||||||    
T  38535809 accaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttccaa 38535712  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||||| ||||||||| |||| | ||||||||||||||||| ||||    
T  38535711 ctccagaaacgcacataaattacagttttagtccaaccacatatg 38535667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 267
Target Start/End: Original strand, 22370628 - 22370758
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| || |||||||||| | ||||||||||||| |||||||||||        |||||||||||||||||| | ||| |||||    
T  22370628 accaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatg-tttttttgcagttttagtcctatctccttatctccaa 22370726  T
Q  236 ctccataaacgcacagaaatgatagttttagt 267  Q
    ||||| |||||||||||||| | |||||||||    
T  22370727 ctccagaaacgcacagaaataacagttttagt 22370758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 138 - 279
Target Start/End: Complemental strand, 43678796 - 43678657
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||||||  |||||  | || ||||||||||||||||||||||| |||||||||||        ||||||| |||| |||||||||||||||||||    
T  43678796 caactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactatatgtttttt--gcagtttcagtcatatcttcctatttccaact 43678699  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctat 279  Q
    | | ||||||||| |||||| ||||||||| |||||||||||    
T  43678698 ctagaaacgcacataaatgacagttttagttcaaccacctat 43678657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 14654703 - 14654561
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| |||   || || ||||||||||||||||||||||| |||||||| |         |||||||||||||||||| | |||||||||    
T  14654703 accaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaactatgt----tttttgcagttttagtcctatctccttatttccaa 14654608  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||| |||||| |||||||    
T  14654607 ctccagaaacgcacataaatgacagttttagttcaaccatctatgct 14654561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 270
Target Start/End: Original strand, 44676507 - 44676636
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    |||||| |||| || ||||| || ||||||||||||||||| ||||| |||||||||||        |||| ||||||||||||| ||||||||||||||    
T  44676507 aactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactatatgtttttt--gcagctttagtcctatctccctatttccaactc 44676604  T
Q  239 cataaacgcacagaaatgatagttttagtcca 270  Q
     | |||||||||||||||| ||||||||||||    
T  44676605 aagaaacgcacagaaatgacagttttagtcca 44676636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 39010107 - 39010250
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||| ||| || ||||| || |||||||||||||||||| || |||||||| ||||        ||||||||||||  |||| ||||||| |||    
T  39010107 accaactcacaaaattgctcatacctcttttaaatcgaacaaaattgttcttaaactgtatgtttttt--gcagttttagtcacatctccctattttcaa 39010204  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  39010205 ctccataaa-gcacataaatgatagttttagtccaaccacatatgct 39010250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 32730421 - 32730565
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||  |||| ||||| || || |||||||| |||||||||||||| |||||||||||        ||||||||| || ||||| |||||||||||    
T  32730421 accaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactatatgtttttt--gcagttttaatcgtatctccctatttccaa 32730518  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| | ||||||||| |||||| ||||||||| ||| ||||||||||    
T  32730519 ctctagaaacgcacataaatgacagttttagttcaatcacctatgct 32730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 43222422 - 43222566
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttccta-tttcca 234  Q
    |||||||||||||||| || || ||| ||||||||||||||||||||||| |||||||||||        ||| ||||| ||||| |  |||| ||| ||    
T  43222422 accaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactatatg--ttttttgcatttttaatccta-ccccctatttttca 43222518  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||| ||||| ||| |||||| ||||||||||||||||||||||||    
T  43222519 actccagaaacgtacaaaaatgacagttttagtccaaccacctatgct 43222566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 39010535 - 39010482
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaa 189  Q
    |||| |||||||||||| || |||||||||||||||||||||||||||||||||    
T  39010535 accagctcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaa 39010482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 143 - 276
Target Start/End: Complemental strand, 43222897 - 43222765
Alignment:
Q  143 cacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttccta-tttccaactccat 241  Q
    |||||||||||||||  || ||||||||||||||||||||||| |||||| ||||        ||||||||||||| | |  |||| ||| ||||||||     
T  43222897 cacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaactttatg-tttttttgcagttttagtccca-ccccctatttttcaactccag 43222800  T
Q  242 aaacgcacagaaatgatagttttagtccaaccacc 276  Q
    ||||||||| |||||| ||||||||||||||||||    
T  43222799 aaacgcacaaaaatgacagttttagtccaaccacc 43222765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 240
Target Start/End: Original strand, 16689390 - 16689492
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||| |||| ||||||        |||||||||||||||||  ||||||||| |    
T  16689390 accaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatatatg--ttttttgcagttttagtcctatcaccctatttccga 16689487  T
Q  236 ctcca 240  Q
    |||||    
T  16689488 ctcca 16689492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 41998742 - 41998600
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||| |||||| ||||| || || ||||||||||||||||||||||| | |||||||||        ||||||||||||||| || ||||||| |||    
T  41998742 accaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccct-aactatatg-tttttttgcagttttagtccta-ctccctattttcaa 41998646  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| | ||||| |||  |||||||| |||||| ||||||||||||||    
T  41998645 ctctagaaacgtaca-taatgatagatttagttcaaccacctatgct 41998600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 36701610 - 36701552
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 194  Q
    |||| ||||||||||||||||| ||| ||| ||||||||||||||| ||| ||||||||    
T  36701610 accagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactat 36701552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 36701140 - 36701196
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 194  Q
    ||||||||||||||| ||||  || ||| ||||||||||||||||||| ||||||||    
T  36701140 caactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaactat 36701196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 27199734 - 27199795
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 197  Q
    |||| |||||||||||||||||  || ||| ||||||||||||| ||||  |||||||||||    
T  27199734 accagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactatatg 27199795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 8873730 - 8873770
Alignment:
Q  144 acgaaaatggtcatatcttttttaaatcgaacaaaatcgtc 184  Q
    |||||||||||||| ||| ||||||||||||||||| ||||    
T  8873730 acgaaaatggtcatgtctcttttaaatcgaacaaaaccgtc 8873770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 6e-46; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 18049622 - 18049767
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||    
T  18049622 accaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt-gcagttttagtcctatctccctatttccaa 18049720  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||| ||||||||||||||||    
T  18049721 ctccagaaacgcacagaaatgacagttttaatccaaccacctatgct 18049767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 18428276 - 18428131
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        ||||||||| |||||||| |||||||||||    
T  18428276 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg-tttttttgcagttttactcctatctccctatttccaa 18428178  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| |||||||||||||||| |||||||    
T  18428177 ctccagaaacgcacaaaaatgacagttttagtccaaccatctatgct 18428131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 9797241 - 9797096
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||  ||||||||||||||| || ||||||||||||||||||||||        ||||||||||| |||||| |||||||||||    
T  9797241 accaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaactatatgttttttt-gcagttttagttctatctacctatttccaa 9797143  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  9797142 ctccataaacgcacagaaatgacagttttagtctaaccacctatgct 9797096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 34799111 - 34799256
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||| |||||||||| ||| |||||||||||||||||| ||||||||||||||||||        |||||||||||||||||| |||||||||||    
T  34799111 accaactcatgaaaatggtcctattttttttaaatcgaacaaagtcgtccttaaactatatgttttttt-gcagttttagtcctatctccctatttccaa 34799209  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||||    
T  34799210 ctccataaacgcacataaatgacaattttagtccaaccacctatgct 34799256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 28254459 - 28254602
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||||    
T  28254459 caactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactatatgttttttt-gcagttttagtcctatctccctatttccaact 28254557  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| ||||||| |||||||| | ||||||||||||||||||||||    
T  28254558 ccagaaacgcatagaaatgacatttttagtccaaccacctatgct 28254602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 28254940 - 28254796
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||| ||||||||||         |||||||||||||||||| |||||||||||    
T  28254940 accaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatat--aatttttgcagttttagtcctatctccctatttccaa 28254843  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  28254842 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28254796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 136 - 283
Target Start/End: Complemental strand, 600012 - 599867
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||| |||||  ||||||||||    
T  600012 accaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaactatatg--ttttttgcagttttagtcttatctctctatttccaa 599915  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgcta 283  Q
     |||| ||||||| |||||||| ||||||||||||||||| |||||||    
T  599914 ttccagaaacgcatagaaatgacagttttagtccaaccacttatgcta 599867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 136 - 277
Target Start/End: Complemental strand, 15256345 - 15256203
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg-nnnnnnnngcagttttagtcctatcttcctatttcca 234  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||         |||||| ||||| ||||| ||||||||||    
T  15256345 accaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttttgcagttctagtcatatctccctatttcca 15256246  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacct 277  Q
    |||||| |||||||||||||||| | |||||||||||||||||    
T  15256245 actccagaaacgcacagaaatgacaattttagtccaaccacct 15256203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 139 - 282
Target Start/End: Complemental strand, 16578607 - 16578466
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    |||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||        |||||||||||||||||| |||||||||||| |    
T  16578607 aactcacgaaaatggttatatctttttcaaatcgaacaaaatcatcattaaactatatgtttttt--gcagttttagtcctatctccctatttccaacac 16578510  T
Q  239 cataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
     | |||||||||||||||| ||||||||||||||||||||||||    
T  16578509 tagaaacgcacagaaatgacagttttagtccaaccacctatgct 16578466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 9796758 - 9796902
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||| ||| ||||| || || ||||||||||||||||||| ||| |||||||||||        |||||||||||| ||||| |||||||||||    
T  9796758 accaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactatatgtttttt--gcagttttagtcatatctccctatttccaa 9796855  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  9796856 ctccataaacgcacagaaatgacagttttagtccaaccacctatgct 9796902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 144 - 282
Target Start/End: Complemental strand, 34799589 - 34799453
Alignment:
Q  144 acgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccataa 243  Q
    |||||| ||||| || || |||||||||||||||||| |||| |||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  34799589 acgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttt--gcagttttagtcctatcttcctatttccaactccataa 34799492  T
Q  244 acgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  34799491 acgcacataaatgatagttttagttcaaccacctatgct 34799453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 35427326 - 35427182
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||  || || ||||||| ||||||||||||||| |||| |||||         ||||||||||||| |||| |||||||||||    
T  35427326 accaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattatat--attttttgcagttttagtcccatctccctatttccaa 35427229  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  35427228 ctccataaacgcacagaaatgacagttttagtccaaccacctatgct 35427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 138 - 282
Target Start/End: Complemental strand, 41260773 - 41260631
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||||||| || ||||| || ||||||||||||||||||||||| |||||||||||        |||||||||||||||||| ||||||| |||||    
T  41260773 caactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctattttcaact 41260676  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| ||||||||| |||||| ||||||||||||||||| ||||||    
T  41260675 ccagaaacgcacataaatgacagttttagtccaaccacttatgct 41260631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 2208746 - 2208891
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||          || |||||||| ||||| ||||||| |||    
T  2208746 accaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactatat-atttttttacaattttagtcatatctccctattttcaa 2208844  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
     |||| ||||| |||||||| ||||||||||||||||||||||||||    
T  2208845 ttccagaaacgtacagaaataatagttttagtccaaccacctatgct 2208891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 7911130 - 7910986
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||  || || ||||||||||||||||||||||| ||||||||||         |||||||||||| ||||   |||||| |||    
T  7911130 accaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactatat--attttttgcagttttagtcatatccctctattttcaa 7911033  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  7911032 ctccataaacgcacagaaatgacagttttagtccaaccacctatgct 7910986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 42035804 - 42035948
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||  || || ||||||||||||||||||||||| ||||||||||         ||| |||||||||||||| |||||||| ||    
T  42035804 accaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatat--atattttgcaattttagtcctatctccctatttctaa 42035901  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  42035902 ctccataaacgcacaaaaatgacagttttagtccaaccacatatgct 42035948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 18050105 - 18049961
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||        || |||||| |||||||| ||||||| |||    
T  18050105 accaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gctgttttaatcctatctccctattttcaa 18050008  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||| | ||||||| ||||||||||||||||    
T  18050007 ctccagaaacgcacagaaataacagttttactccaaccacctatgct 18049961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 142 - 279
Target Start/End: Original strand, 26252847 - 26252982
Alignment:
Q  142 tcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccat 241  Q
    |||||||| |||| | |||| ||||||||||||||||||||||| |||||||||||        |||||||||||||||||| ||||||||||||||||     
T  26252847 tcacgaaattggtaacatctcttttaaatcgaacaaaatcgtccctaaactatatgttttgt--gcagttttagtcctatctccctatttccaactccag 26252944  T
Q  242 aaacgcacagaaatgatagttttagtccaaccacctat 279  Q
    |||||| ||||||||| || ||||||||||||||||||    
T  26252945 aaacgctcagaaatgacagatttagtccaaccacctat 26252982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 278
Target Start/End: Original strand, 599564 - 599704
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| |||||||| || ||||||||||||||||||| ||| |||| ||||||        |||||||||||| ||||| |||||||||||    
T  599564 accaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattatatgtttttt--gcagttttagtcatatctccctatttccaa 599661  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccaccta 278  Q
    ||||| ||||||||| |||||| |||||||||||| |||||||    
T  599662 ctccagaaacgcacacaaatgacagttttagtccagccaccta 599704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 5731326 - 5731182
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||| |||| ||||  || ||||| |||||||||||||||||||| |||||||||||        ||||||||||| |||||| ||||||| |||    
T  5731326 accaactcaggaaattggttctaccttttataaatcgaacaaaatcgtccataaactatatgtttttt--gcagttttagttctatctccctattttcaa 5731229  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  5731228 ctccagaaacgcacataaatgacagttttagtccaaccacctatgct 5731182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 268
Target Start/End: Original strand, 5730849 - 5730979
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||        || |||||||||||| || |||||||  ||    
T  5730849 accaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactatatg--ttttttgctgttttagtcctacctccctatttttaa 5730946  T
Q  236 ctccataaacgcacagaaatgatagttttagtc 268  Q
    ||||| ||||| |||||||||| ||||||||||    
T  5730947 ctccagaaacgtacagaaatgacagttttagtc 5730979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 35693927 - 35694046
Alignment:
Q  163 ttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagtt 262  Q
    |||||||||||| |||||||||| ||||||||||          ||||||||||||||||| |||||||||||||||| ||||||||| |||||| ||||    
T  35693927 ttttaaatcgaataaaatcgtccataaactatatatatttttttcagttttagtcctatctccctatttccaactccagaaacgcacataaatgacagtt 35694026  T
Q  263 ttagtccaaccacctatgct 282  Q
    ||||||||||||||| ||||    
T  35694027 ttagtccaaccacctttgct 35694046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 279
Target Start/End: Complemental strand, 42036286 - 42036144
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||| ||||||||| || || || ||||||||||||||||||||||| |||||||||||        |||||||||||| |||  || |||||||||    
T  42036286 accaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttt-gcagttttagtcgtattctcatatttccaa 42036188  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctat 279  Q
    ||||| ||| ||||| |||||| |||||||||||||||||||||    
T  42036187 ctccagaaatgcacaaaaatgacagttttagtccaaccacctat 42036144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 41260303 - 41260403
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||| ||||| |||||||||||    
T  41260303 accaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcagttttagtcttatctccctatttccaa 41260400  T
Q  236 ctc 238  Q
    |||    
T  41260401 ctc 41260403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 136 - 281
Target Start/End: Complemental strand, 6115625 - 6115481
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||| ||||| ||||| || || ||||||||||||||||||||||| |||||||||||        | ||||||||| |||||| | ||||| |||    
T  6115625 accaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttt-gtagttttagttctatctccttattttcaa 6115527  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgc 281  Q
    ||| | |||||||||||||||| ||||||||||||||||| |||||    
T  6115526 ctcaagaaacgcacagaaatgacagttttagtccaaccacttatgc 6115481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 280
Target Start/End: Complemental strand, 35694389 - 35694242
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnn------gcagttttagtcctatcttcctatttc 232  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||||||||||||||||               || ||||||||| ||||| ||||||||    
T  35694389 aactcacaaaaatggtcctacattttttaaatcgaacaaaatcgtccttaaactatattttttttttttttttgctgttttagtcttatctccctatttc 35694290  T
Q  233 caactccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  35694289 caactccagaaacgcacataaatgacagttttagtccaaccacctatg 35694242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 15255885 - 15255991
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||        |||||||||||||||||| |||||||||||    
T  15255885 accaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatg--ttttttgcagttttagtcctatctccctatttccaa 15255982  T
Q  236 ctccataaa 244  Q
    |||||||||    
T  15255983 ctccataaa 15255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 210 - 282
Target Start/End: Original strand, 35426917 - 35426989
Alignment:
Q  210 ttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  35426917 ttttactcctatctccctatttccaactccataaacgcacagaaatgacagttttagtctaaccacatatgct 35426989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 16578140 - 16578285
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||| |||| ||||||        |||||||| ||||||||| |||||||||||    
T  16578140 accaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatg--ttttttgcagttttggtcctatctccctatttccaa 16578237  T
Q  236 ctccataaacgc-acagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||| | | |||  | |||||||||||||||| |||||||    
T  16578238 ctccagaaacgcaaaaaaaaaaacagttttagtccaaccatctatgct 16578285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 35163817 - 35163874
Alignment:
Q  225 cctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||    
T  35163817 cctatttccaactcgagaaacgcacagaaatgacagttttagtccaaccacctatgct 35163874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 7910650 - 7910709
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 197  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||||| |||| ||||||    
T  7910650 caactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaattatatg 7910709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 18674207 - 18674241
Alignment:
Q  163 ttttaaatcgaacaaaatcgtccttaaactatatg 197  Q
    ||||||||||||||||||||||| |||||||||||    
T  18674207 ttttaaatcgaacaaaatcgtccctaaactatatg 18674241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 44831371 - 44831408
Alignment:
Q  229 tttccaactccataaacgcacagaaatgatagttttag 266  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  44831371 tttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 3e-45; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 136 - 281
Target Start/End: Complemental strand, 56077838 - 56077695
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||    
T  56077838 accaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcagttttagtcctatctccctatttccaa 56077741  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgc 281  Q
    ||| | ||||||||| |||||| |||||||||||||||||||||||    
T  56077740 ctctagaaacgcacaaaaatgacagttttagtccaaccacctatgc 56077695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 139 - 282
Target Start/End: Original strand, 26974318 - 26974460
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||||||||||||||    
T  26974318 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttta-cagttttagtcctatctccctatttccaactc 26974416  T
Q  239 cataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    || |||||||||||||||| ||||||||| |||||| |||||||    
T  26974417 cagaaacgcacagaaatgacagttttagttcaaccaactatgct 26974460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 45839063 - 45838917
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnn-gcagttttagtcctatcttcctatttcca 234  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||    
T  45839063 accaactcacgaaa-tggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttttgcagttttagtcctatcttcctatttcca 45838965  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  45838964 actccagaaacgcacagaaatgacagttttagtccaaccacatatgct 45838917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 136 - 278
Target Start/End: Original strand, 21034267 - 21034408
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||         ||||||||||| ||||| |||||||||||    
T  21034267 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttta-cagttttagtcatatctccctatttccaa 21034365  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccaccta 278  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  21034366 ctccataaacgcacataaatgacagttttagtccaaccaccta 21034408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 28465595 - 28465451
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        ||| |||||||||||||| |||||||||||    
T  28465595 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcaattttagtcctatctccctatttccaa 28465498  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||||||| ||||   ||||||||||||||||||||||||    
T  28465497 ctccataaacgcacataaatagcagttttagtccaaccacctatgct 28465451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 34789414 - 34789558
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| |||||||| ||    
T  34789414 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcagttttagtcctatctccctatttcaaa 34789511  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| | ||||||||||||||||||||||    
T  34789512 ctccagaaacgcacataaatgacaattttagtccaaccacctatgct 34789558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 41114189 - 41114335
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||        |||||||||||| ||||| |||||||||||    
T  41114189 accaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaactatatgttttttttgcagttttagtcatatctccctatttccaa 41114288  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| | |||||||||||||||| | ||||||||||||||||||||||    
T  41114289 ctctagaaacgcacagaaatgacaattttagtccaaccacctatgct 41114335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 14439860 - 14440004
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| |||||||| |||||||||||  ||||||||||||| |||||||||||        |||||||||||||||||| |||||||||||    
T  14439860 accaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttccaa 14439957  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  14439958 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 14440342 - 14440198
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||        |||||||||||| ||||| |||||||||||    
T  14440342 accaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactatatgtttttt--gcagttttagtcatatctccctatttccaa 14440245  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| | |||||||||||||||| ||||||||||||||||||||||||    
T  14440244 ctctagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 141 - 282
Target Start/End: Complemental strand, 54441078 - 54440939
Alignment:
Q  141 ctcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactcca 240  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| ||||||||||||||||    
T  54441078 ctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt--gcagttttagtcctatctccctatttccaactcca 54440981  T
Q  241 taaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
     ||||||||   ||||| ||||||||||||||||||||||||    
T  54440980 gaaacgcacgtcaatgacagttttagtccaaccacctatgct 54440939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 136 - 280
Target Start/End: Original strand, 12593056 - 12593198
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||        ||| ||||| |||||||| ||||||| |||    
T  12593056 accaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactatatg--ttttttgcaattttaatcctatctccctattttcaa 12593153  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||||| |||||||||||||||| |||||||||||||| |||||||    
T  12593154 ctccagaaacgcacagaaatgacagttttagtccaacaacctatg 12593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 28166036 - 28166180
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||         |||||||||||||||||| ||||||| |||    
T  28166036 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatat--tttttttgcagttttagtcctatctccctattttcaa 28166133  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    || || |||||||||||||||||||||||| | ||||||||||||||    
T  28166134 ctacaaaaacgcacagaaatgatagttttaattcaaccacctatgct 28166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 136 - 283
Target Start/End: Complemental strand, 46737169 - 46737024
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||||||        |||||||||||| ||||||||||| |||||    
T  46737169 accaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcatatcttcctatctccaa 46737072  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgcta 283  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  46737071 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgcta 46737024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 138 - 282
Target Start/End: Complemental strand, 34807651 - 34807509
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    ||||||||||||||  |  |||||||||||| ||||||||||||||||||||||||||||        |||||||||||||||||| |||||||||||||    
T  34807651 caactcacgaaaattattctatcttttttaattcgaacaaaatcgtccttaaactatatgtttttg--gcagttttagtcctatctccctatttccaact 34807554  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||| |||||||| ||||||||||||||||| ||||||    
T  34807553 ccataaacgcatagaaatgacagttttagtccaaccacatatgct 34807509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 24851980 - 24851835
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| || || || || ||||||||||||||||||||||| |||||||||||        ||||||||||||||||||| ||||||||||    
T  24851980 accaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttt-gcagttttagtcctatctttctatttccaa 24851882  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  24851881 ctccagaaacgcacagaaatgaaagttttagtacaaccacctatgct 24851835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 34789897 - 34789752
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || |||||||||||||||||| |||| |||||||||||        |||||||||||||||||| |||||||||||    
T  34789897 accaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgttttttt-gcagttttagtcctatctccctatttccaa 34789799  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  34789798 ctccaaaaacgcacataaatgacagttttagtccaaccacctatgct 34789752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 6616706 - 6616849
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||        || || ||||||||| ||  ||||||||||||    
T  6616706 caactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaactatatg-tttttttgctgtgttagtcctacctctctatttccaact 6616804  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  6616805 ccagaaacgcacataaatgacagttttagtccaaccacctatgct 6616849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 34807150 - 34807293
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    |||||||||||| |||||||| || ||||||||||||||||||||||| |||| ||||||        |||||||||||||||||| | |||||||||||    
T  34807150 caactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgttttttt-gcagttttagtcctatctccatatttccaact 34807248  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  34807249 ccagaaacgcacataaatgacagttttagtccaaccacctatgct 34807293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 45838579 - 45838723
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||| || ||||| || || ||||||||||||||||||||||| |||||||||||        |||||||||||||||||| ||||||||| |    
T  45838579 accaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt--gcagttttagtcctatctccctatttccta 45838676  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    || || ||||||||||||||||||||||| |||||||||||||||||    
T  45838677 cttcaaaaacgcacagaaatgatagtttttgtccaaccacctatgct 45838723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 282
Target Start/End: Complemental strand, 16215007 - 16214865
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    ||||| ||||||||| ||||||||||||||||| ||| |||||||||||||||||||||         ||||||||| | |||||||||||||| |||||    
T  16215007 caacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactatat--attttttgcagttttaattctatcttcctattttcaact 16214910  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| |||| |||| |||||||||||||||||||||||||||||||    
T  16214909 ccagaaacacacataaatgatagttttagtccaaccacctatgct 16214865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 136 - 280
Target Start/End: Original strand, 46736687 - 46736829
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||        |||| |||| |||||||| ||||||| |||    
T  46736687 accaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaactatatg--ttttttgcagatttaatcctatctccctattttcaa 46736784  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    ||||| |||||||||||||||| ||||||||| ||||||| ||||    
T  46736785 ctccagaaacgcacagaaatgacagttttagttcaaccacttatg 46736829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 12593537 - 12593393
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||||  ||||||||||         |||||||||||||||||| ||||||| |||    
T  12593537 accaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactatat--attttttgcagttttagtcctatctccctattttcaa 12593440  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||| ||||| ||||||||||||||||| ||||||    
T  12593439 ctccagaaacgcacaggaatgacagttttagtccaaccacatatgct 12593393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 21034751 - 21034606
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||||| | ||||||||         ||||||||||| |||||| |||||||||||    
T  21034751 accaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatat-ttttttttgcagttttagttctatctccctatttccaa 21034653  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||| |||| |||||| ||||||||||||||||||||||||    
T  21034652 ctccagaaacacacaaaaatgacagttttagtccaaccacctatgct 21034606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 55677472 - 55677327
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||  |||||||||||         || |||||||||||||| |||||||||||    
T  55677472 accaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgttttttta-caattttagtcctatctccctatttccaa 55677374  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||    
T  55677373 ctccataaacgcacataaatgacagttttagtccaatcacctatgct 55677327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 28465113 - 28465257
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||| |||||| || || || || |||||||||||||||||||||||||||||||||||        |||||||||||| ||||| ||||||| |||    
T  28465113 accaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttt--gcagttttagtcatatctccctattttcaa 28465210  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||    
T  28465211 ctccagaaacgcacataaatgacagttttagtccaaccacctatgct 28465257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 35643587 - 35643743
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnn----------gcagttttagtcctatcttc 225  Q
    |||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||                  |||||||||||||||||| |    
T  35643587 accaactcacgaaaatggtcctatctttttaaaattgaataaaatcgtccttaaactatatgttttttttttttttttttgcagttttagtcctatctcc 35643686  T
Q  226 ctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35643687 ctatttacaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 35643743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 279
Target Start/End: Original strand, 33689861 - 33690001
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||| ||| ||||| || || |||||||||||||||||||||||||||||||||||        |||||||||||| ||||| ||||||| |||    
T  33689861 accaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatgttttt---gcagttttagtcatatctccctatttacaa 33689957  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctat 279  Q
    ||||| ||||||||| |||||| ||| |||||||||||||||||    
T  33689958 ctccagaaacgcacataaatgacagtgttagtccaaccacctat 33690001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 41608408 - 41608551
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnn-gcagttttagtcctatcttcctatttccaac 236  Q
    ||||||| |||| |||||||| || |||||||||||||||||||||||  ||||||||||         |||||||||||||||||| | ||||||||||    
T  41608408 caactcatgaaattggtcatacctcttttaaatcgaacaaaatcgtcc--aaactatatgtttttttttgcagttttagtcctatctccatatttccaac 41608505  T
Q  237 tccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    | || |||||||||||||||| ||||||||||||||||||||||||    
T  41608506 ttcaaaaacgcacagaaatgacagttttagtccaaccacctatgct 41608551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 54440603 - 54440745
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||| |||||||| |         |||||||||||||||||| ||||||| |||    
T  54440603 accaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatgt----tttttgcagttttagtcctatctccctattttcaa 54440698  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    || || ||| |||||||||||| ||||||||||||||||||||||||    
T  54440699 cttcagaaatgcacagaaatgacagttttagtccaaccacctatgct 54440745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 269
Target Start/End: Original strand, 19528901 - 19529033
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||| |||||||| ||||| || || |||||||||||| |||||||||| |||||||||||        |||||||||||||||||| |||||||||||    
T  19528901 accaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatatgttttttt-gcagttttagtcctatctccctatttccaa 19528999  T
Q  236 ctccataaacgcacagaaatgatagttttagtcc 269  Q
    ||||  |||||||||||||||| |||||||||||    
T  19529000 ctccggaaacgcacagaaatgacagttttagtcc 19529033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 280
Target Start/End: Original strand, 36168361 - 36168506
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnn-gcagttttagtcctatcttcctatttcca 234  Q
    |||||| ||||||| ||||| || || |||||||||||||||||||||||||||| ||||||         |||||||||||| ||||| |||||||| |    
T  36168361 accaacccacgaaattggtcttacctcttttaaatcgaacaaaatcgtccttaaattatatgtttttttttgcagttttagtcttatctccctatttcta 36168460  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    |||||| ||||||| | |||||| |||| |||||||||||||||||    
T  36168461 actccagaaacgcatataaatgacagttatagtccaaccacctatg 36168506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 36168845 - 36168701
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||||||||||||| || ||| |||||||||| |||||||||  | |||||| ||||||        || ||||||||||||||| ||||||| |||    
T  36168845 accaactcacgaaaatgatcctattttttttaaatagaacaaaattattcttaaattatatgtttttt--gcggttttagtcctatctccctattttcaa 36168748  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||| ||||| |||| | ||||||||||||||||||||||||    
T  36168747 ctccataaatgcacataaatcacagttttagtccaaccacctatgct 36168701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 24851565 - 24851639
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatg 280  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||    
T  24851565 gcagttttagtcttatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatg 24851639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 282
Target Start/End: Complemental strand, 19529187 - 19529063
Alignment:
Q  157 tatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactccataaacgcacagaaatg 256  Q
    ||||| |||||||| ||||||||||||| ||||||||||||        ||||||||||| |||||| | |||||||||||  | |||||||||||||||    
T  19529187 tatctcttttaaattgaacaaaatcgtctttaaactatatgttttttt-gcagttttagttctatctccatatttccaacttaaaaaacgcacagaaatg 19529089  T
Q  257 atagttttagtccaaccacctatgct 282  Q
    | |||||||||||||||| |||||||    
T  19529088 acagttttagtccaaccatctatgct 19529063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 282
Target Start/End: Original strand, 35193345 - 35193483
Alignment:
Q  141 ctcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactcca 240  Q
    ||||||||||||||| || || ||| ||||||||||||||||||| |||||||||||        ||||||||||||||||| |||||||| ||||| ||    
T  35193345 ctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatg--ttttttgcagttttagtcctatc-tcctattttcaacttca 35193441  T
Q  241 taaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
     ||||||| |||||||| |||||||| || ||| ||||||||    
T  35193442 gaaacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 33777664 - 33777725
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 197  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||    
T  33777664 accaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaactatatg 33777725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 24851348 - 24851407
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactata 195  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  24851348 accaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtccttaaactata 24851407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 1397627 - 1397683
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaact 192  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  1397627 accaactcataaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 1397683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 17504468 - 17504412
Alignment:
Q  141 ctcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatg 197  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  17504468 ctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaactatatg 17504412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 229673 - 229529
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnnnnngcagttttagtcctatcttcctatttcca 234  Q
    |||| ||||||||||||||| |  || ||| ||||| |||||||||||||||||||||| |||        ||||||||| ||||| || | ||||| ||    
T  229673 accagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatgttttt---gcagttttaatcctacctccttattttca 229577  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||| |||||||||||| ||| | ||||||| ||||||||||||||    
T  229576 actccagaaacgcacagaagtgacaattttagtacaaccacctatgct 229529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 229282 - 229337
Alignment:
Q  227 tatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| |||||||||||||||||| || ||| ||||||||||||||||||||||||    
T  229282 tattttcaactccataaacgcacaaaagtgacagttttagtccaaccacctatgct 229337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 18965563 - 18965513
Alignment:
Q  225 cctatttccaactccataaacgcacagaaatgatagttttagtccaaccac 275  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||||||||    
T  18965563 cctattttcaactccataaacgcacataaatgacagttttagtccaaccac 18965513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 6617173 - 6617074
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    ||||||||||| ||||| || || |||||||||||| |||||||||| ||||||||||         |||||||||||||||||| ||||| ||||||||    
T  6617173 aactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatat--tttttttgcagttttagtcctatctccctatctccaactc 6617076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 40160126 - 40160269
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||| ||||||||||| |||||  || ||||||||||||||||| ||||| |||||||||||        ||||||||||||||| | |||||||| |||    
T  40160126 accagctcacgaaaatagtcatgcctcttttaaatcgaacaaaaccgtccctaaactatatg--ttttttgcagttttagtccta-cctcctattttcaa 40160222  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||| ||||||    |||||||| |||||||| || ||| ||||||||    
T  40160223 ctctataaacatggagaaatgacagttttagacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 234
Target Start/End: Complemental strand, 26974753 - 26974662
Alignment:
Q  142 tcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttcca 234  Q
    |||||||| ||||| || || |||||||||||||||||| |||| |||||||||||        |||||||||||| ||||||||||||||||    
T  26974753 tcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatg-tttttttgcagttttagtcatatcttcctatttcca 26974662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 41608929 - 41608870
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactata 195  Q
    |||||||||||||| ||||| || || ||||||||| ||||||||||| |||||||||||    
T  41608929 accaactcacgaaattggtcctacctcttttaaatccaacaaaatcgttcttaaactata 41608870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 272
Target Start/End: Original strand, 18965176 - 18965306
Alignment:
Q  140 actcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    ||||||||||| |||| |  || ||| |||||||||||||||||||||||||||| |||        ||||||||||| ||| || | ||||| ||||||    
T  18965176 actcacgaaaacggtcttgcctctttcaaatcgaacaaaatcgtccttaaactatcatg---tttttgcagttttagttctacctccttattttcaactc 18965272  T
Q  239 cataaacgcacagaaatgatagttttagtccaac 272  Q
     | ||||||| | |||||| ||||||||||||||    
T  18965273 tagaaacgcatataaatgacagttttagtccaac 18965306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 33778123 - 33778020
Alignment:
Q  139 aactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaactc 238  Q
    |||||||||||||| |  || || ||||||||| ||||||||||| | |||| ||||||        ||||||||||| |||||| ||||||||||||||    
T  33778123 aactcacgaaaatgattctacctcttttaaatcaaacaaaatcgttcctaaattatatgtttttt--gcagttttagttctatctccctatttccaactc 33778026  T
Q  239 cataaa 244  Q
    ||||||    
T  33778025 cataaa 33778020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 23986552 - 23986610
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 194  Q
    |||| ||||||||||||||||| ||| ||| |||||||||||||  |||| ||||||||    
T  23986552 accagctcacgaaaatggtcatgtctctttcaaatcgaacaaaactgtccctaaactat 23986610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 31297203 - 31297161
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaa 178  Q
    |||||||||||||| |||||||  |||||||||||||||||||    
T  31297203 accaactcacgaaattggtcatgccttttttaaatcgaacaaa 31297161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 30598033 - 30597973
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatat 196  Q
    ||||||||||| || ||||  | ||| ||||||||||||||||||||||| |||| |||||    
T  30598033 accaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaattatat 30597973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 54995477 - 54995437
Alignment:
Q  242 aaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||| ||||||||||||||||| || ||||||||||||    
T  54995477 aaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 6426 - 6568
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||| ||||||        ||||||||||||||||||||||||||||||||    
T  6426 caactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgtttttt--gcagttttagtcctatcttcctatttccaact 6523  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
     || |||||||||||||||| ||||||| ||||||||| ||||||    
T  6524 tcagaaacgcacagaaatgacagttttattccaaccacatatgct 6568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 6826 - 6761
Alignment:
Q  217 cctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||| ||||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  6826 cctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 6761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 6444 - 6586
Alignment:
Q  138 caactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaact 237  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||| ||||||        ||||||||||||||||||||||||||||||||    
T  6444 caactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgtttttt--gcagttttagtcctatcttcctatttccaact 6541  T
Q  238 ccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
     || |||||||||||||||| ||||||| ||||||||| ||||||    
T  6542 tcagaaacgcacagaaatgacagttttattccaaccacatatgct 6586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 6844 - 6779
Alignment:
Q  217 cctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||| ||||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  6844 cctatctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacatatgct 6779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 282
Target Start/End: Original strand, 46298 - 46443
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    ||||||| |||||||||||  || || ||||||||||||||||||| ||| |||||||||||        |||||||||||| ||||| |||||||||||    
T  46298 accaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactatatgttttttt-gcagttttagtcatatctccctatttccaa 46396  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
     |||||||| ||||| |||||| ||||||||||||||||||||||||    
T  46397 ttccataaatgcacaaaaatgacagttttagtccaaccacctatgct 46443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 46782 - 46637
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgnnnnnnnngcagttttagtcctatcttcctatttccaa 235  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||        | ||||||||| |||||  |||||||||||    
T  46782 accaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtctttaaactatatg-tttttttgtagttttagttctatcaccctatttccaa 46684  T
Q  236 ctccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||| ||||||||| |||||| | |||| |||||||||||||||||    
T  46683 ctccaaaaacgcacataaatgacaattttggtccaaccacctatgct 46637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 78417 - 78493
Alignment:
Q  206 gcagttttagtcctatcttcctatttccaactccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    ||||||||||||||||||  ||||||||||||||| ||| ||| |||||||| | ||||||||||||||||||||||    
T  78417 gcagttttagtcctatctctctatttccaactccagaaatgcatagaaatgacaattttagtccaaccacctatgct 78493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 282
Target Start/End: Complemental strand, 205881 - 205738
Alignment:
Q  136 accaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat-atgnnnnnnnngcagttttagtcctatcttcctatttcca 234  Q
    |||||||||||||||||||| |  || ||| ||||||||||||| ||||| |||||||| |||        ||||||||||||||| | |||||||| ||    
T  205881 accaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatg---tttttgcagttttagtccta-cgtcctattttca 205786  T
Q  235 actccataaacgcacagaaatgatagttttagtccaaccacctatgct 282  Q
    |||||| ||||||| |||||||  |||||||| || ||| ||||||||    
T  205785 actccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 159390 - 159337
Alignment:
Q  141 ctcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 194  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||| | ||||||||    
T  159390 ctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcgttcataaactat 159337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University