View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11472_low_12 (Length: 366)
Name: NF11472_low_12
Description: NF11472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11472_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 62 - 350
Target Start/End: Complemental strand, 14128097 - 14127809
Alignment:
| Q |
62 |
ttccattcatcccgaggaatattggactccatcaactgttgttcttccttcttcaactagtactactgctacaccaccaattgagaagcctacatttgct |
161 |
Q |
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| T |
14128097 |
ttccattcatcctgaggaatattggactccatcaactgttgttcttccttcttcaactagtactactgctacaccgccaattgagaagcctacatttgct |
14127998 |
T |
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| Q |
162 |
aaaggaaagaaacaacgaaaaagaagtgatgttgaaacatatgagaatgaaaatagtccaattagatggggattgccagtggttacttcattgtttggta |
261 |
Q |
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| T |
14127997 |
aaaggaaagaaacaaagaaaaagaagtgatgttgaaacatatgagaatgaaaatagtccaattagatggggattgccagtggttacttcattgtttggta |
14127898 |
T |
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| Q |
262 |
tggctgcagttaggttacatgaagttggatcatcaacagttgagttgaaagagcattggggaggttctttagctttggaaattgttaac |
350 |
Q |
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| T |
14127897 |
tggctgcagttaggttacatgaagttggatcatcaacagttgagttgaaagagcattggggaggttctttagctttggaaattgttaac |
14127809 |
T |
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