View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11472_low_9 (Length: 377)

Name: NF11472_low_9
Description: NF11472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11472_low_9
NF11472_low_9
[»] chr7 (25 HSPs)
chr7 (1-360)||(38134082-38134444)
chr7 (1-111)||(2525766-2525882)
chr7 (72-110)||(38804489-38804527)
chr7 (1-110)||(24339663-24339772)
chr7 (67-112)||(29763127-29763172)
chr7 (67-111)||(24105754-24105798)
chr7 (73-113)||(40131936-40131976)
chr7 (67-110)||(5409771-5409814)
chr7 (73-111)||(18212972-18213010)
chr7 (72-114)||(29812594-29812636)
chr7 (72-109)||(11272531-11272568)
chr7 (77-110)||(23128603-23128636)
chr7 (1-34)||(30606069-30606102)
chr7 (67-112)||(30813873-30813918)
chr7 (73-110)||(32093954-32093991)
chr7 (67-111)||(598284-598328)
chr7 (74-110)||(3721152-3721188)
chr7 (74-110)||(5307339-5307375)
chr7 (1-41)||(17257987-17258027)
chr7 (1-33)||(19930947-19930979)
chr7 (67-111)||(21864884-21864928)
chr7 (71-111)||(28973880-28973920)
chr7 (74-110)||(35862034-35862070)
chr7 (74-110)||(36314580-36314616)
chr7 (67-111)||(43027403-43027447)
[»] chr2 (17 HSPs)
chr2 (7-109)||(44860347-44860449)
chr2 (1-110)||(12668352-12668461)
chr2 (66-110)||(33153491-33153535)
chr2 (1-32)||(18570993-18571024)
chr2 (1-32)||(37402091-37402122)
chr2 (67-110)||(37419830-37419873)
chr2 (72-110)||(22084756-22084794)
chr2 (1-35)||(31026716-31026750)
chr2 (1-35)||(45000850-45000884)
chr2 (67-108)||(2438661-2438702)
chr2 (1-110)||(11223793-11223901)
chr2 (2-35)||(14373431-14373464)
chr2 (77-110)||(21374673-21374706)
chr2 (73-110)||(26769604-26769641)
chr2 (74-110)||(10535685-10535721)
chr2 (75-111)||(18420362-18420398)
chr2 (73-113)||(42511319-42511359)
[»] chr1 (21 HSPs)
chr1 (1-110)||(47989518-47989627)
chr1 (67-108)||(1486646-1486687)
chr1 (67-110)||(18190048-18190091)
chr1 (1-32)||(30847727-30847758)
chr1 (67-110)||(42325635-42325678)
chr1 (66-109)||(45534131-45534174)
chr1 (1-35)||(19637789-19637823)
chr1 (66-112)||(27965938-27965984)
chr1 (64-110)||(28268125-28268171)
chr1 (1-110)||(16164244-16164353)
chr1 (72-113)||(22794015-22794056)
chr1 (75-108)||(33202987-33203020)
chr1 (73-110)||(35702542-35702579)
chr1 (73-110)||(37598913-37598950)
chr1 (67-108)||(42359391-42359432)
chr1 (1-33)||(2445891-2445923)
chr1 (74-110)||(9630561-9630597)
chr1 (67-115)||(22881562-22881610)
chr1 (74-110)||(22947813-22947849)
chr1 (62-110)||(31511909-31511957)
chr1 (73-113)||(36878548-36878588)
[»] chr4 (20 HSPs)
chr4 (67-111)||(12895213-12895257)
chr4 (73-110)||(16184913-16184950)
chr4 (2-110)||(5225542-5225650)
chr4 (67-110)||(11596297-11596340)
chr4 (74-109)||(14126064-14126099)
chr4 (74-109)||(17425348-17425383)
chr4 (1-32)||(18513248-18513279)
chr4 (67-110)||(23292926-23292969)
chr4 (72-110)||(5775304-5775342)
chr4 (67-113)||(12708218-12708264)
chr4 (76-110)||(15724483-15724517)
chr4 (1-35)||(40224502-40224536)
chr4 (1-35)||(56049897-56049931)
chr4 (73-110)||(715545-715582)
chr4 (73-110)||(752871-752908)
chr4 (1-34)||(14465299-14465332)
chr4 (72-109)||(18575984-18576021)
chr4 (73-110)||(29205550-29205587)
chr4 (1-33)||(11110224-11110256)
chr4 (66-110)||(40784028-40784072)
[»] chr8 (19 HSPs)
chr8 (72-110)||(25566911-25566949)
chr8 (74-112)||(36450692-36450730)
chr8 (1-109)||(29447040-29447148)
chr8 (1-41)||(31548291-31548331)
chr8 (67-110)||(8343043-8343086)
chr8 (67-110)||(8343403-8343446)
chr8 (76-111)||(11833935-11833970)
chr8 (67-110)||(13436910-13436953)
chr8 (1-112)||(15816056-15816167)
chr8 (1-112)||(22651997-22652108)
chr8 (72-111)||(24858097-24858136)
chr8 (72-110)||(16641909-16641947)
chr8 (79-109)||(22493566-22493596)
chr8 (72-109)||(5138774-5138811)
chr8 (74-110)||(7616768-7616804)
chr8 (66-110)||(11791617-11791660)
chr8 (75-111)||(18964274-18964310)
chr8 (75-111)||(31514938-31514974)
chr8 (72-112)||(39820509-39820549)
[»] chr5 (25 HSPs)
chr5 (44-110)||(11596398-11596463)
chr5 (68-110)||(35017120-35017162)
chr5 (67-119)||(15086554-15086606)
chr5 (72-116)||(17123128-17123172)
chr5 (74-109)||(13287354-13287389)
chr5 (67-110)||(38464313-38464356)
chr5 (1-35)||(14818307-14818341)
chr5 (72-110)||(14873603-14873641)
chr5 (1-107)||(18592094-18592200)
chr5 (73-111)||(21576684-21576722)
chr5 (76-110)||(35252258-35252292)
chr5 (75-112)||(2436995-2437032)
chr5 (76-113)||(15884062-15884099)
chr5 (44-105)||(26312822-26312883)
chr5 (1-110)||(39698562-39698671)
chr5 (76-112)||(6471840-6471876)
chr5 (67-111)||(7677792-7677836)
chr5 (1-33)||(10009847-10009879)
chr5 (74-110)||(10298633-10298669)
chr5 (76-112)||(16864112-16864148)
chr5 (72-108)||(19579793-19579829)
chr5 (72-108)||(21190998-21191034)
chr5 (74-110)||(22423764-22423800)
chr5 (74-110)||(27932318-27932354)
chr5 (3-35)||(32444789-32444821)
[»] chr3 (20 HSPs)
chr3 (69-110)||(11252054-11252095)
chr3 (66-110)||(20503540-20503584)
chr3 (74-113)||(4990909-4990948)
chr3 (67-110)||(11610585-11610628)
chr3 (67-110)||(34185052-34185095)
chr3 (67-110)||(40052388-40052431)
chr3 (1-35)||(20691340-20691374)
chr3 (44-109)||(23271937-23272000)
chr3 (72-110)||(27277780-27277818)
chr3 (1-35)||(27513666-27513700)
chr3 (1-35)||(40150575-40150609)
chr3 (65-110)||(14979223-14979268)
chr3 (73-110)||(21211376-21211413)
chr3 (61-110)||(46191283-46191332)
chr3 (75-112)||(55401159-55401196)
chr3 (72-112)||(8903516-8903556)
chr3 (1-33)||(12704663-12704695)
chr3 (74-114)||(25775590-25775630)
chr3 (67-111)||(27505327-27505371)
chr3 (74-110)||(28812609-28812645)
[»] chr6 (16 HSPs)
chr6 (74-110)||(3209482-3209518)
chr6 (64-108)||(26178620-26178664)
chr6 (66-114)||(26553821-26553869)
chr6 (67-110)||(8714067-8714110)
chr6 (1-32)||(9024183-9024214)
chr6 (74-109)||(17341622-17341657)
chr6 (72-111)||(32839570-32839609)
chr6 (67-113)||(9027243-9027289)
chr6 (1-35)||(10158005-10158039)
chr6 (68-110)||(31563729-31563771)
chr6 (1-35)||(32980979-32981013)
chr6 (73-110)||(17327590-17327627)
chr6 (74-110)||(4878025-4878061)
chr6 (76-112)||(7723197-7723233)
chr6 (70-106)||(23130405-23130441)
chr6 (66-110)||(34595209-34595253)
[»] scaffold0512 (1 HSPs)
scaffold0512 (75-114)||(4972-5011)
[»] scaffold0011 (1 HSPs)
scaffold0011 (8-112)||(239953-240052)
[»] scaffold0793 (1 HSPs)
scaffold0793 (73-110)||(4821-4858)
[»] scaffold0475 (1 HSPs)
scaffold0475 (73-110)||(3390-3427)
[»] scaffold0227 (1 HSPs)
scaffold0227 (73-110)||(15053-15090)
[»] scaffold0003 (1 HSPs)
scaffold0003 (66-110)||(236914-236958)


Alignment Details
Target: chr7 (Bit Score: 337; Significance: 0; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 1 - 360
Target Start/End: Complemental strand, 38134444 - 38134082
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggtctcatgagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38134444 aaatgacataattcaatgtaatcatatgtgtcggtctcatgtgggtgttggactcgataagtattcgacatcgggacacgcctaatccgaggagtgtatg 38134345  T
Q  101 tgcttcatagcttctgagatgtgattttataccattttgctcataattcaagtagattagttattactt---catgtttagccaacataattctatattt 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  38134344 tgcttcatagcttctgagatgtgattttataccattttgctcataattcaagtagattagttattacttaatcatgtttagccaacataattctatattt 38134245  T
Q  198 tccggaacacaatgttagggatagggagtgcatataacattgaatacatgagacaatgatcgaacctacggggacatgaatgcaacaaagtgaaagtttg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38134244 tccggaacacaatgttagggatagggagtgcatataacattgaaaacatgagacaatgatcgaacctacggggacatgaatgcaacaaagtgaaagtttg 38134145  T
Q  298 tgtgtgacatttctttatttttgaacgacaaatgttagtgttactgttattatattggagttt 360  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38134144 tgtgtgacatttctttatttttgaacgacaaatgttagtgttactgttattatattggagttt 38134082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 2525882 - 2525766
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggtctcat------gagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggag 94  Q
    ||||||||||||||||| ||||||||||||||||| ||        |  |||||||||| |||||||||   |||||| ||||| |||||||||||||||    
T  2525882 aaatgacataattcaatataatcatatgtgtcggtgtcggtgtcgggtcggtgttggacacgataagtaaccgacatcaggacatgcctaatccgaggag 2525783  T
Q  95 tgtatgtgcttcatagc 111  Q
    | |||||| ||||||||    
T  2525782 tatatgtggttcatagc 2525766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 110
Target Start/End: Complemental strand, 38804527 - 38804489
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  38804527 cgggacatgcctaatccgaggagtgtatgtgcttcatag 38804489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24339663 - 24339772
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggtctcatgagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatg 100  Q
    |||| |||||||||| |||||| | | |||||||| || ||  ||||| |||| ||| | ||||  |||| |||||||||||||||||||||||||   |    
T  24339663 aaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccg 24339762  T
Q  101 tgcttcatag 110  Q
    ||||||||||    
T  24339763 tgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 29763172 - 29763127
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatagct 112  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||    
T  29763172 gacatcaggacacgcctaatccgaggagtgtccgtgcttcatagct 29763127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 24105754 - 24105798
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||    
T  24105754 gacaccgggacacgcctaacccgaggagtgtttgtgcttcatagc 24105798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 40131976 - 40131936
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatagctt 113  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  40131976 gggacacgtctaatccgaggagtgtctgtgcttcatagctt 40131936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 5409814 - 5409771
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||| ||||||||||||||||||||||||||  |||||||||||    
T  5409814 gacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 111
Target Start/End: Complemental strand, 18213010 - 18212972
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  18213010 gggacacgccttatccgaggagtgtctgtgcttcatagc 18212972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 29812636 - 29812594
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcatagcttc 114  Q
    |||||||||||||||||||| |||||  |||||||||||||||    
T  29812636 cgggacacgcctaatccgagaagtgtccgtgcttcatagcttc 29812594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 11272568 - 11272531
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcata 109  Q
    |||||||||||||||||||||||| | |||||||||||    
T  11272568 cgggacacgcctaatccgaggagtatctgtgcttcata 11272531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 110
Target Start/End: Complemental strand, 23128636 - 23128603
Alignment:
Q  77 cacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||||| ||||||||||||    
T  23128636 cacgcctaatccgaggagtgtctgtgcttcatag 23128603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 30606102 - 30606069
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcgg 34  Q
    ||||||||||||||||||||| ||||||||||||    
T  30606102 aaatgacataattcaatgtaaccatatgtgtcgg 30606069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 30813873 - 30813918
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatagct 112  Q
    |||||| | ||||||||||||||||||||||  |||||||||||||    
T  30813873 gacatcagaacacgcctaatccgaggagtgtccgtgcttcatagct 30813918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 32093991 - 32093954
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||||||||  |||||||||||    
T  32093991 gggacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 598284 - 598328
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    |||| |||||||||||||||||||| |||||  ||||||||||||    
T  598284 gacaccgggacacgcctaatccgagaagtgtccgtgcttcatagc 598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 3721152 - 3721188
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||||  ||||||||||||||    
T  3721152 ggacacgcctaatccgaggagcatatgtgcttcatag 3721188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 5307339 - 5307375
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  5307339 ggacacgcctaatccaaggagtgtacgtgcttcatag 5307375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17258027 - 17257987
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggtctcatg 41  Q
    |||| ||||||||||||||||||||| |||||||| |||||    
T  17258027 aaataacataattcaatgtaatcataagtgtcggtgtcatg 17257987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19930979 - 19930947
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcg 33  Q
    |||||||||||||||||||||| ||||||||||    
T  19930979 aaatgacataattcaatgtaattatatgtgtcg 19930947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 21864884 - 21864928
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    |||| ||||||||| ||||| |||||||||| |||||||||||||    
T  21864884 gacaccgggacacgtctaattcgaggagtgtctgtgcttcatagc 21864928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 28973920 - 28973880
Alignment:
Q  71 tcgggacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    |||||||||||||||||||||| ||||  ||||||||||||    
T  28973920 tcgggacacgcctaatccgaggtgtgtccgtgcttcatagc 28973880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 35862034 - 35862070
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||||||||  |||||||||||    
T  35862034 ggacacgcctaatccgaggagtgtccgtgcttcatag 35862070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 36314616 - 36314580
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  36314616 ggacacgcctaatcctaggagtatatgtgcttcatag 36314580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 43027447 - 43027403
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||||    
T  43027447 gacaccgggacacgcctaatccgatgagtgtccgtgcttcatagc 43027403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 44860347 - 44860449
Alignment:
Q  7 cataattcaatgtaatcatatgtgtcggtctcatgagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatgtgcttc 106  Q
    ||||||||| |||||| |||||||||||| || ||  |||||||||| ||| | || |  ||||||||||||| |||||| ||||||||||  |||||||    
T  44860347 cataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttc 44860446  T
Q  107 ata 109  Q
    |||    
T  44860447 ata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12668461 - 12668352
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggtctcatgagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatg 100  Q
    ||||||||||||||| |||||| ||| |||||||| || ||  ||| |||||  ||| | |||| |||||| ||||||| |||||| |||||||| |  |    
T  12668461 aaatgacataattcagtgtaattataagtgtcggtgtcgtgtcggtattggatacgacacgtatctgacattgggacacacctaattcgaggagtatccg 12668362  T
Q  101 tgcttcatag 110  Q
    ||||||||||    
T  12668361 tgcttcatag 12668352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 33153491 - 33153535
Alignment:
Q  66 tgacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||    
T  33153491 tgacatcgggacacgtctaattcaaggagtgtatgtgcttcatag 33153535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 18570993 - 18571024
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtc 32  Q
    ||||||||||||||||||||||||||||||||    
T  18570993 aaatgacataattcaatgtaatcatatgtgtc 18571024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 37402122 - 37402091
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtc 32  Q
    ||||||||||||||||||||||||||||||||    
T  37402122 aaatgacataattcaatgtaatcatatgtgtc 37402091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 37419830 - 37419873
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||| ||||||||||||||||||||||||||  |||||||||||    
T  37419830 gacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 110
Target Start/End: Complemental strand, 22084794 - 22084756
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  22084794 cgggacacgcctaatccgatgagtgtctgtgcttcatag 22084756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 31026716 - 31026750
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggt 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  31026716 aaatgacataattcaatgtaatcatatatgtcggt 31026750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 45000884 - 45000850
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggt 35  Q
    |||||||| ||||||||||||||||||||||||||    
T  45000884 aaatgacacaattcaatgtaatcatatgtgtcggt 45000850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 2438702 - 2438661
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcat 108  Q
    |||| ||||||||||||||||||||||||||  |||||||||    
T  2438702 gacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11223901 - 11223793
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggtctcatgagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatg 100  Q
    |||| |||||||||| |||||| | | |||||||| |||||  ||||| |||| ||| |  | | ||||| |||||||||||||||| |||||||||  |    
T  11223901 aaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccg 11223803  T
Q  101 tgcttcatag 110  Q
    ||||||||||    
T  11223802 tgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 14373464 - 14373431
Alignment:
Q  2 aatgacataattcaatgtaatcatatgtgtcggt 35  Q
    ||||||||||||||||||||||| ||||||||||    
T  14373464 aatgacataattcaatgtaatcacatgtgtcggt 14373431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 110
Target Start/End: Complemental strand, 21374706 - 21374673
Alignment:
Q  77 cacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||| |||||||||||||||||||    
T  21374706 cacgcctaatccgaagagtgtatgtgcttcatag 21374673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 26769604 - 26769641
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||||||||  |||||||||||    
T  26769604 gggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 10535721 - 10535685
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||||||||  |||||||||||    
T  10535721 ggacacgcctaatccgaggagtgttcgtgcttcatag 10535685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 18420398 - 18420362
Alignment:
Q  75 gacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  18420398 gacacgcctaatccgagaagtgtctgtgcttcatagc 18420362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 42511359 - 42511319
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatagctt 113  Q
    |||||||| ||||||||||||||||  ||||||||||||||    
T  42511359 gggacacggctaatccgaggagtgtccgtgcttcatagctt 42511319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47989518 - 47989627
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggtctcatgagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatg 100  Q
    |||| |||||||||| |||||| | | |||||||| || ||  ||||| |||| ||| |  | | ||||||||||||||||||||||||||||||||  |    
T  47989518 aaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccg 47989617  T
Q  101 tgcttcatag 110  Q
    ||||||||||    
T  47989618 tgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 1486687 - 1486646
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcat 108  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  1486687 gacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 18190091 - 18190048
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||| |||||||| |||||||||||||||||||| |||||||||    
T  18190091 gacaccgggacacacctaatccgaggagtgtatgcgcttcatag 18190048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 30847758 - 30847727
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtc 32  Q
    ||||||||||||||||||||||||||||||||    
T  30847758 aaatgacataattcaatgtaatcatatgtgtc 30847727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 42325635 - 42325678
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||    
T  42325635 gacatcgggacacacctaattcgaggagtgtctgtgcttcatag 42325678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 45534174 - 45534131
Alignment:
Q  66 tgacatcgggacacgcctaatccgaggagtgtatgtgcttcata 109  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||    
T  45534174 tgacatagggacacgccttatccgaggagtgtttgtgcttcata 45534131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 19637789 - 19637823
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggt 35  Q
    ||||||||| |||||||||||||||||||||||||    
T  19637789 aaatgacattattcaatgtaatcatatgtgtcggt 19637823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 27965984 - 27965938
Alignment:
Q  66 tgacatcgggacacgcctaatccgaggagtgtatgtgcttcatagct 112  Q
    ||||| ||||||||||||||||||||||||||   ||||||||||||    
T  27965984 tgacaccgggacacgcctaatccgaggagtgtccatgcttcatagct 27965938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 28268171 - 28268125
Alignment:
Q  64 tttgacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||| ||||| ||||||||||||||||||||||||  |||||||    
T  28268171 tttgacaccgggatacgcctaatccgaggagtgtatgtatttcatag 28268125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16164353 - 16164244
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggtctcatgagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatg 100  Q
    |||| |||||||| |||||||| |||||||||  | || ||  |||||||||| | | | || |  |||| | ||||||||||||||||| |||||||||    
T  16164353 aaatcacataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgtccgacaccaggacacgcctaatccgaagagtgtatg 16164254  T
Q  101 tgcttcatag 110  Q
    || |||||||    
T  16164253 tgtttcatag 16164244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 22794056 - 22794015
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcatagctt 113  Q
    |||||||| |||||| ||||||||||| ||||||||||||||    
T  22794056 cgggacacacctaattcgaggagtgtacgtgcttcatagctt 22794015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 33202987 - 33203020
Alignment:
Q  75 gacacgcctaatccgaggagtgtatgtgcttcat 108  Q
    ||||||||||||||||||||| ||||||||||||    
T  33202987 gacacgcctaatccgaggagtatatgtgcttcat 33203020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 35702579 - 35702542
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||||||||  |||||||||||    
T  35702579 gggacacgcctaatccgaggagtgtccgtgcttcatag 35702542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 37598913 - 37598950
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||||||||  |||||||||||    
T  37598913 gggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 42359432 - 42359391
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcat 108  Q
    |||| ||||||||||||||||||||||||||  |||||||||    
T  42359432 gacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 2445891 - 2445923
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcg 33  Q
    ||||||||||||||||| |||||||||||||||    
T  2445891 aaatgacataattcaatttaatcatatgtgtcg 2445923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 9630597 - 9630561
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||||||||  |||||||||||    
T  9630597 ggacacgcctaatccgaggagtgttcgtgcttcatag 9630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 22881610 - 22881562
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatagcttct 115  Q
    |||| ||||||||| ||||||||||||||||  ||||||||||| ||||    
T  22881610 gacaccgggacacgtctaatccgaggagtgtccgtgcttcataggttct 22881562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 22947813 - 22947849
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||||||||  |||||||||||    
T  22947813 ggacacgcctaatccgaggagtgtccgtgcttcatag 22947849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 31511957 - 31511909
Alignment:
Q  62 tatttgacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||| ||||||||||||||||||||  ||||||||| | ||||||||||    
T  31511957 tattcgacatcgggacacgcctaatttgaggagtgtgtatgcttcatag 31511909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 36878548 - 36878588
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatagctt 113  Q
    |||||||||||||||| ||||||||  ||||||||||||||    
T  36878548 gggacacgcctaatcccaggagtgtccgtgcttcatagctt 36878588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 12895257 - 12895213
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    |||||||||||||||||||||||||||||||  ||||||||||||    
T  12895257 gacatcgggacacgcctaatccgaggagtgttcgtgcttcatagc 12895213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 16184913 - 16184950
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  16184913 gggacacgcctaatccgaggagtgtttgtgcttcatag 16184950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 5225650 - 5225542
Alignment:
Q  2 aatgacataattcaatgtaatcatatgtgtcggtctcatgagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatgt 101  Q
    ||||||||||||||||| ||| |||||||||||| || ||  ||||| |||| |||||  |||  |||  ||||||||||||||||   ||||| | |||    
T  5225650 aatgacataattcaatgcaataatatgtgtcggtgtcgtgttggtgtcggacacgatacatatcggaccccgggacacgcctaatctatggagtatctgt 5225551  T
Q  102 gcttcatag 110  Q
    |||||||||    
T  5225550 gcttcatag 5225542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 11596340 - 11596297
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||||| |||||||||  |||||||||||    
T  11596340 gacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 14126099 - 14126064
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcata 109  Q
    ||||||||||||||||| ||||||||||||||||||    
T  14126099 ggacacgcctaatccgaagagtgtatgtgcttcata 14126064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 17425383 - 17425348
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcata 109  Q
    |||||||||||||||||||||||| |||||||||||    
T  17425383 ggacacgcctaatccgaggagtgtctgtgcttcata 17425348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 18513279 - 18513248
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtc 32  Q
    ||||||||||||||||||||||||||||||||    
T  18513279 aaatgacataattcaatgtaatcatatgtgtc 18513248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 23292969 - 23292926
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||| ||||||||||||||||||||||||||  |||||||||||    
T  23292969 gacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 110
Target Start/End: Complemental strand, 5775342 - 5775304
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  5775342 cgggacacgcctaatccgaggagtgtccgtgcttcatag 5775304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 12708218 - 12708264
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatagctt 113  Q
    |||||||| ||||||||||||||||||| ||  ||||||||||||||    
T  12708218 gacatcggaacacgcctaatccgaggagcgtccgtgcttcatagctt 12708264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 15724517 - 15724483
Alignment:
Q  76 acacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||| ||||||||||||||    
T  15724517 acacgcctaatccgaggagtttatgtgcttcatag 15724483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 40224536 - 40224502
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggt 35  Q
    ||||||||||||| |||||||||||||||||||||    
T  40224536 aaatgacataatttaatgtaatcatatgtgtcggt 40224502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 56049897 - 56049931
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggt 35  Q
    |||||||||| ||||||||||||||||||||||||    
T  56049897 aaatgacatagttcaatgtaatcatatgtgtcggt 56049931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 715582 - 715545
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||||||||  |||||||||||    
T  715582 gggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 752908 - 752871
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||||||||  |||||||||||    
T  752908 gggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 14465332 - 14465299
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcgg 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  14465332 aaatgacataattcaatttaatcatatgtgtcgg 14465299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 18576021 - 18575984
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcata 109  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  18576021 cgggacacgcctaattcgatgagtgtatgtgcttcata 18575984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 29205550 - 29205587
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||||||||  |||||||||||    
T  29205550 gggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11110224 - 11110256
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcg 33  Q
    |||||||||||||| ||||||||||||||||||    
T  11110224 aaatgacataattcgatgtaatcatatgtgtcg 11110256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 40784028 - 40784072
Alignment:
Q  66 tgacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||| |||||||| |||||||||||||||||  |||||||||||    
T  40784028 tgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 40784072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 110
Target Start/End: Original strand, 25566911 - 25566949
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  25566911 cgggacacgcctaatccgaggagtgtctgtgcttcatag 25566949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 112
Target Start/End: Complemental strand, 36450730 - 36450692
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatagct 112  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  36450730 ggacacgcctaatccgaggagtgtctgtgcttcatagct 36450692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 29447148 - 29447040
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggtctcatgagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatg 100  Q
    |||| ||||||||||||||||  | | |||||||| |||||  ||||| |||| ||| | || | ||||| | ||||||||||||||| ||||||||  |    
T  29447148 aaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccg 29447049  T
Q  101 tgcttcata 109  Q
    |||||||||    
T  29447048 tgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31548331 - 31548291
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggtctcatg 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  31548331 aaatgacataattcaatgtaatcacatgtgtcggtgtcatg 31548291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 8343043 - 8343086
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||    
T  8343043 gacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 8343403 - 8343446
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||    
T  8343403 gacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 111
Target Start/End: Original strand, 11833935 - 11833970
Alignment:
Q  76 acacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    |||||||||||||||||||||| |||||||||||||    
T  11833935 acacgcctaatccgaggagtgtctgtgcttcatagc 11833970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 13436953 - 13436910
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||| ||||||||||||||||| |||||||| ||||||||||||    
T  13436953 gacaccgggacacgcctaatccaaggagtgtctgtgcttcatag 13436910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 15816167 - 15816056
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggtctcatgagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatg 100  Q
    |||| |||||||| | |||||| ||| |||||||| || ||  ||||| |||| ||| | | ||  |||| |||||||||||||||||||| |||||  |    
T  15816167 aaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccg 15816068  T
Q  101 tgcttcatagct 112  Q
    ||||||||||||    
T  15816067 tgcttcatagct 15816056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 22651997 - 22652108
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggtctcatgagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatg 100  Q
    |||| |||||||||||| |||| | | |||||||| || ||  ||||| |||| ||| | || |  |||| ||||||||| ||||||||||||||||  |    
T  22651997 aaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccg 22652096  T
Q  101 tgcttcatagct 112  Q
    ||||||||||||    
T  22652097 tgcttcatagct 22652108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 111
Target Start/End: Original strand, 24858097 - 24858136
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  24858097 cgggacacgcctaatcagaggagtgtttgtgcttcatagc 24858136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 110
Target Start/End: Complemental strand, 16641947 - 16641909
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  16641947 cgggacacacctaatccgaggagtgtctgtgcttcatag 16641909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 109
Target Start/End: Original strand, 22493566 - 22493596
Alignment:
Q  79 cgcctaatccgaggagtgtatgtgcttcata 109  Q
    |||||||||||||||||||||||||||||||    
T  22493566 cgcctaatccgaggagtgtatgtgcttcata 22493596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 109
Target Start/End: Complemental strand, 5138811 - 5138774
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcata 109  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  5138811 cgggacacgcctaatcagaggagtatatgtgcttcata 5138774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 7616804 - 7616768
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  7616804 ggacacgcctaatcccaggagtatatgtgcttcatag 7616768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 11791617 - 11791660
Alignment:
Q  66 tgacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  11791617 tgacatcgggacacacctgatccgaggagtgt-tgtgcttcatag 11791660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 18964274 - 18964310
Alignment:
Q  75 gacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  18964274 gacacgccttatccgaggagtgtctgtgcttcatagc 18964310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 31514938 - 31514974
Alignment:
Q  75 gacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    |||||||||||||||||||||||  ||||||||||||    
T  31514938 gacacgcctaatccgaggagtgtccgtgcttcatagc 31514974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 39820509 - 39820549
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcatagct 112  Q
    |||||||||||||||||||| |||||  |||||||||||||    
T  39820509 cgggacacgcctaatccgagaagtgtccgtgcttcatagct 39820549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 11596463 - 11596398
Alignment:
Q  44 ggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||| ||||| |||| ||||| | |||||||||||||||||||||| | ||||||||||||    
T  11596463 ggtgttggacacgatatgtatctgaca-ctggacacgcctaatccgaggagtatttgtgcttcatag 11596398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 35017120 - 35017162
Alignment:
Q  68 acatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||||||||||||||  |||||||||||    
T  35017120 acatcgggacacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 15086554 - 15086606
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatagcttctgaga 119  Q
    |||||||| |||||||||||||||||||||| | |||||||||| || |||||    
T  15086554 gacatcggaacacgcctaatccgaggagtgtctttgcttcataggttatgaga 15086606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 17123128 - 17123172
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcatagcttctg 116  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||    
T  17123128 cgggacacgcctaatccgaggagtgtccgtgcttcatagtttctg 17123172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 13287389 - 13287354
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcata 109  Q
    |||||||||||||| |||||||||||||||||||||    
T  13287389 ggacacgcctaatctgaggagtgtatgtgcttcata 13287354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 38464356 - 38464313
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||    
T  38464356 gacaccgggacacacctaatccgaggagtgtctgtgcttcatag 38464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 14818341 - 14818307
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggt 35  Q
    ||||||||||||||||||||| |||||||||||||    
T  14818341 aaatgacataattcaatgtaaacatatgtgtcggt 14818307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 110
Target Start/End: Original strand, 14873603 - 14873641
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  14873603 cgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 18592094 - 18592200
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggtctcatgagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatg 100  Q
    |||| ||||||||||||||||| ||||||| |||| || ||  ||||| |||| | | | || | ||||||||||||||| ||||| ||| ||||||  |    
T  18592094 aaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgtctgacatcgggacacggctaattcgatgagtgtccg 18592193  T
Q  101 tgcttca 107  Q
    |||||||    
T  18592194 tgcttca 18592200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 111
Target Start/End: Complemental strand, 21576722 - 21576684
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  21576722 gggacacgcctaatccgaggagtgtccgtgcttcatagc 21576684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 35252292 - 35252258
Alignment:
Q  76 acacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||| ||||||||||||||    
T  35252292 acacgcctaatccgaggagtatatgtgcttcatag 35252258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 2436995 - 2437032
Alignment:
Q  75 gacacgcctaatccgaggagtgtatgtgcttcatagct 112  Q
    |||||||||||||||||||||||  |||||||||||||    
T  2436995 gacacgcctaatccgaggagtgttcgtgcttcatagct 2437032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 15884062 - 15884099
Alignment:
Q  76 acacgcctaatccgaggagtgtatgtgcttcatagctt 113  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  15884062 acacgcctaatccgaggagtgtctgtgtttcatagctt 15884099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 26312822 - 26312883
Alignment:
Q  44 ggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatgtgctt 105  Q
    ||||| |||| ||||| || | ||||| | |||||| |||||||||||||||||||||||||    
T  26312822 ggtgtcggacacgatacgtgtctgacaccaggacacacctaatccgaggagtgtatgtgctt 26312883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 39698562 - 39698671
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggtctcatgagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatg 100  Q
    |||| |||||||||| |||||| | | ||||| || || ||  ||||| |||| ||| | ||||  |||| || |||||||||||||||||||||||  |    
T  39698562 aaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccg 39698661  T
Q  101 tgcttcatag 110  Q
    ||||||||||    
T  39698662 tgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 6471876 - 6471840
Alignment:
Q  76 acacgcctaatccgaggagtgtatgtgcttcatagct 112  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  6471876 acacgcctaatccgaggggtgaatgtgcttcatagct 6471840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 7677792 - 7677836
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    |||| ||||||||||||||||||||||| ||  ||||||||||||    
T  7677792 gacaccgggacacgcctaatccgaggagagtcggtgcttcatagc 7677836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10009847 - 10009879
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  10009847 aaatgacataattcaatgtaatcacatgtgtcg 10009879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 10298633 - 10298669
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||||||||  |||||||||||    
T  10298633 ggacacgcctaatccgaggagtgtccgtgcttcatag 10298669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 16864112 - 16864148
Alignment:
Q  76 acacgcctaatccgaggagtgtatgtgcttcatagct 112  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  16864112 acacgcctaatccgagaagtatatgtgcttcatagct 16864148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 19579793 - 19579829
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcat 108  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  19579793 cgggacacgcctaatccgaggagtgtacgtgtttcat 19579829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 21191034 - 21190998
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcat 108  Q
    ||||||||||||||||||||||||||  |||||||||    
T  21191034 cgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 22423800 - 22423764
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||||||||  |||||||||||    
T  22423800 ggacacgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 27932318 - 27932354
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  27932318 ggacacgcctaattcgaggagtgtttgtgcttcatag 27932354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 32444789 - 32444821
Alignment:
Q  3 atgacataattcaatgtaatcatatgtgtcggt 35  Q
    |||||||||||||||||||||| ||||||||||    
T  32444789 atgacataattcaatgtaatcaaatgtgtcggt 32444821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 11252054 - 11252095
Alignment:
Q  69 catcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||| |||||||||||||||||||||| ||||||||||||    
T  11252054 catcggaacacgcctaatccgaggagtgtctgtgcttcatag 11252095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 20503540 - 20503584
Alignment:
Q  66 tgacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||    
T  20503540 tgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 4990948 - 4990909
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatagctt 113  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  4990948 ggacacgcctaatccgaggagtgtccgtgcttcatagctt 4990909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 11610585 - 11610628
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||||| |||||||||  |||||||||||    
T  11610585 gacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 34185095 - 34185052
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||| ||||||||||||||||||||||||||  |||||||||||    
T  34185095 gacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 40052388 - 40052431
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||| ||||||||||||||||||||||||||  |||||||||||    
T  40052388 gacaccgggacacgcctaatccgaggagtgttcgtgcttcatag 40052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 20691340 - 20691374
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggt 35  Q
    ||||||||||||||| |||||||||||||||||||    
T  20691340 aaatgacataattcagtgtaatcatatgtgtcggt 20691374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 23272000 - 23271937
Alignment:
Q  44 ggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatgtgcttcata 109  Q
    |||||||||| ||||| |||| |||||||   |||||||||||  |||||||||||||||||||||    
T  23272000 ggtgttggacacgatacgtatctgacatca--acacgcctaatttgaggagtgtatgtgcttcata 23271937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 110
Target Start/End: Complemental strand, 27277818 - 27277780
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  27277818 cgggacatgtctaatccgaggagtgtatgtgcttcatag 27277780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 27513700 - 27513666
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggt 35  Q
    ||||||||| |||||||||||||||||||||||||    
T  27513700 aaatgacattattcaatgtaatcatatgtgtcggt 27513666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 40150609 - 40150575
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggt 35  Q
    |||||| ||||||||||||||||||||||||||||    
T  40150609 aaatgatataattcaatgtaatcatatgtgtcggt 40150575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 14979223 - 14979268
Alignment:
Q  65 ttgacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||| |||||||||||||| |||||||||||  |||||||||||    
T  14979223 ttgacaccgggacacgcctaacccgaggagtgtccgtgcttcatag 14979268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 21211376 - 21211413
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  21211376 gggacactcctaatccgaggagtgtttgtgcttcatag 21211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 46191332 - 46191283
Alignment:
Q  61 gtatttgacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||| ||||| |||||||||||||||||||| ||| | ||||||||||||    
T  46191332 gtatctgacaccgggacacgcctaatccgagaagtatttgtgcttcatag 46191283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 55401159 - 55401196
Alignment:
Q  75 gacacgcctaatccgaggagtgtatgtgcttcatagct 112  Q
    |||||||||||||||||||||||  |||||||||||||    
T  55401159 gacacgcctaatccgaggagtgtccgtgcttcatagct 55401196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 8903516 - 8903556
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcatagct 112  Q
    |||||||| |||||||||||||||||  |||||||||||||    
T  8903516 cgggacacacctaatccgaggagtgttcgtgcttcatagct 8903556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12704695 - 12704663
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcg 33  Q
    |||||||||||||||||||||||||| ||||||    
T  12704695 aaatgacataattcaatgtaatcataggtgtcg 12704663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 25775590 - 25775630
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatagcttc 114  Q
    ||||||||||||||||||||||||  ||||||||| |||||    
T  25775590 ggacacgcctaatccgaggagtgttcgtgcttcattgcttc 25775630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 27505327 - 27505371
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    |||| ||||||| ||||||||||||||||||  ||||||||||||    
T  27505327 gacaccgggacatgcctaatccgaggagtgtccgtgcttcatagc 27505371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 28812609 - 28812645
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  28812609 ggacacgcctaatccgaggagtgtctgtgcctcatag 28812645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 3209482 - 3209518
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||||||| ||||||||||||    
T  3209482 ggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 26178664 - 26178620
Alignment:
Q  64 tttgacatcgggacacgcctaatccgaggagtgtatgtgcttcat 108  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||    
T  26178664 tttgacaccgggacacgcctaatcggaggagtgtctgtgcttcat 26178620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 26553821 - 26553869
Alignment:
Q  66 tgacatcgggacacgcctaatccgaggagtgtatgtgcttcatagcttc 114  Q
    ||||||| | ||||||||||| |||||||||||||||||||||| ||||    
T  26553821 tgacatcagaacacgcctaattcgaggagtgtatgtgcttcataacttc 26553869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 8714067 - 8714110
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||| |||||||||||||| | ||||||||||    
T  8714067 gacatcgggacacgcccaatccgaggagtgtctttgcttcatag 8714110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 9024214 - 9024183
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtc 32  Q
    ||||||||||||||||||||||||||||||||    
T  9024214 aaatgacataattcaatgtaatcatatgtgtc 9024183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 109
Target Start/End: Complemental strand, 17341657 - 17341622
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcata 109  Q
    |||||||||||||||||||||||| |||||||||||    
T  17341657 ggacacgcctaatccgaggagtgtttgtgcttcata 17341622  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 111
Target Start/End: Complemental strand, 32839609 - 32839570
Alignment:
Q  72 cgggacacgcctaatccgaggagtgtatgtgcttcatagc 111  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  32839609 cgggacacgcctaatccgagaagtgtctgtgcttcatagc 32839570  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 9027243 - 9027289
Alignment:
Q  67 gacatcgggacacgcctaatccgaggagtgtatgtgcttcatagctt 113  Q
    |||| ||||||||| ||||||| |||||||| |||||||||||||||    
T  9027243 gacaccgggacacggctaatccaaggagtgtttgtgcttcatagctt 9027289  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 10158005 - 10158039
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggt 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  10158005 aaatgacataattcaatgtaatcacatgtgtcggt 10158039  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 31563771 - 31563729
Alignment:
Q  68 acatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||| ||||||||||||| | ||||||||||||||||||||    
T  31563771 acatcgagacacgcctaatctgcggagtgtatgtgcttcatag 31563729  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 32980979 - 32981013
Alignment:
Q  1 aaatgacataattcaatgtaatcatatgtgtcggt 35  Q
    ||||||||||||||||| |||||||||||||||||    
T  32980979 aaatgacataattcaatataatcatatgtgtcggt 32981013  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 17327627 - 17327590
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||||||||  |||||||||||    
T  17327627 gggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 4878025 - 4878061
Alignment:
Q  74 ggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||||||||||||||||  |||||||||||    
T  4878025 ggacacgcctaatccgaggagtgtccgtgcttcatag 4878061  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 7723233 - 7723197
Alignment:
Q  76 acacgcctaatccgaggagtgtatgtgcttcatagct 112  Q
    ||||||||||||||||||||||  |||||||||||||    
T  7723233 acacgcctaatccgaggagtgtccgtgcttcatagct 7723197  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 23130441 - 23130405
Alignment:
Q  70 atcgggacacgcctaatccgaggagtgtatgtgcttc 106  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  23130441 atcgggacatgcctaatctgaggagtgtatgtgcttc 23130405  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 34595209 - 34595253
Alignment:
Q  66 tgacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||| |||||||| |||||||||||||||||  |||||||||||    
T  34595209 tgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

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Target: scaffold0512 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 114
Target Start/End: Complemental strand, 5011 - 4972
Alignment:
Q  75 gacacgcctaatccgaggagtgtatgtgcttcatagcttc 114  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  5011 gacatgcctaatccgaggagtgtctgtgcttcatagcttc 4972  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 240052 - 239953
Alignment:
Q  8 ataattcaatgtaatcatatgtgtcggtctcatgagggtgttggactcgataagtatttgacatcgggacacgcctaatccgaggagtgtatgtgcttca 107  Q
    |||||||||||||||||||||||||||| |||| |   ||| ||||  |||| ||||  || | ||||||||||||||||| ||||  | ||||||||||    
T  240052 ataattcaatgtaatcatatgtgtcggtgtcatca---tgtcggacatgatacgtatcagataacgggacacgcctaatccaagga--gcatgtgcttca 239958  T

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Target: scaffold0793 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 4858 - 4821
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||||||||  |||||||||||    
T  4858 gggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

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Target: scaffold0475 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 3390 - 3427
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    |||||||||||||||||||||||||  |||||||||||    
T  3390 gggacacgcctaatccgaggagtgtccgtgcttcatag 3427  T

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Target: scaffold0227 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 15053 - 15090
Alignment:
Q  73 gggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  15053 gggacacgccttatccgaggagtgtttgtgcttcatag 15090  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 236958 - 236914
Alignment:
Q  66 tgacatcgggacacgcctaatccgaggagtgtatgtgcttcatag 110  Q
    ||||| |||||||| ||||||| ||||||||| ||||||||||||    
T  236958 tgacaccgggacacacctaatctgaggagtgtctgtgcttcatag 236914  T

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