View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11473_high_33 (Length: 256)
Name: NF11473_high_33
Description: NF11473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11473_high_33 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 21 - 246
Target Start/End: Original strand, 55210993 - 55211218
Alignment:
| Q |
21 |
gaacgagcctactcctacttctgacaacaaagttcatgttcggaaggtaactttttctgatcctttagaacagaaaaggcttgatgctgcttcattagat |
120 |
Q |
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| T |
55210993 |
gaacgagcctactcctacttctgacaacaaagttcatgttcggaaggtaactttttctgatcctttagaacagaaaaggcttgatgctgcttcattagat |
55211092 |
T |
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| Q |
121 |
gggaataatagaatcctctttccgagtattgagtctgaagatttgagtggtgaaactttgttagagtccaatgttgttcctatgtatgatttgtggtttg |
220 |
Q |
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| T |
55211093 |
gggaataatagaatcctctttccgagttttgagtctgaagatttgagtggtgaaactttgttagagtccaatgttgttcctatgtatgatttgtcgtttg |
55211192 |
T |
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| Q |
221 |
atgctatgcgtatgaatgttcctatg |
246 |
Q |
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|||||||||||||||||||||||||| |
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| T |
55211193 |
atgctatgcgtatgaatgttcctatg |
55211218 |
T |
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