View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11473_low_22 (Length: 333)

Name: NF11473_low_22
Description: NF11473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11473_low_22
NF11473_low_22
[»] chr5 (45 HSPs)
chr5 (136-317)||(23115796-23115977)
chr5 (1-138)||(24362247-24362384)
chr5 (1-137)||(2865166-2865302)
chr5 (1-137)||(18183380-18183516)
chr5 (1-132)||(5819340-5819471)
chr5 (1-132)||(8647441-8647572)
chr5 (1-132)||(19359139-19359270)
chr5 (1-137)||(15372284-15372420)
chr5 (1-132)||(29455153-29455284)
chr5 (1-137)||(14215654-14215790)
chr5 (9-137)||(18182968-18183096)
chr5 (9-137)||(5818927-5819055)
chr5 (1-137)||(8460928-8461064)
chr5 (1-137)||(15708969-15709104)
chr5 (9-137)||(19359555-19359683)
chr5 (1-137)||(164602-164738)
chr5 (1-129)||(24361843-24361971)
chr5 (18-137)||(8647866-8647985)
chr5 (1-129)||(24325218-24325346)
chr5 (9-132)||(2864757-2864880)
chr5 (9-132)||(8461350-8461473)
chr5 (9-132)||(14215244-14215367)
chr5 (1-137)||(14463932-14464067)
chr5 (9-132)||(164194-164316)
chr5 (9-132)||(29454743-29454866)
chr5 (20-137)||(24331557-24331676)
chr5 (9-132)||(7349436-7349559)
chr5 (1-132)||(16018592-16018721)
chr5 (15-132)||(4222147-4222264)
chr5 (9-137)||(16019006-16019134)
chr5 (9-132)||(7348562-7348685)
chr5 (9-132)||(25000508-25000631)
chr5 (22-132)||(15371874-15371983)
chr5 (1-113)||(25000112-25000224)
chr5 (9-132)||(15709388-15709510)
chr5 (1-134)||(6019181-6019314)
chr5 (1-132)||(24331971-24332106)
chr5 (16-132)||(4623151-4623267)
chr5 (1-132)||(4219666-4219796)
chr5 (7-122)||(4624642-4624757)
chr5 (17-132)||(6018317-6018431)
chr5 (1-82)||(13814139-13814224)
chr5 (9-53)||(14462686-14462730)
chr5 (60-137)||(15029780-15029857)
chr5 (9-137)||(20266335-20266463)
[»] chr7 (28 HSPs)
chr7 (1-137)||(19830418-19830554)
chr7 (1-132)||(19590528-19590659)
chr7 (1-132)||(37786770-37786901)
chr7 (3-137)||(35289314-35289448)
chr7 (1-138)||(34534202-34534339)
chr7 (1-136)||(4641439-4641574)
chr7 (1-136)||(29100262-29100397)
chr7 (1-137)||(2659251-2659387)
chr7 (9-137)||(19590944-19591072)
chr7 (1-132)||(32005025-32005156)
chr7 (1-132)||(38858646-38858777)
chr7 (9-137)||(38859060-38859188)
chr7 (1-129)||(23953140-23953268)
chr7 (9-122)||(29099863-29099976)
chr7 (19-132)||(35288906-35289019)
chr7 (9-137)||(2658837-2658965)
chr7 (1-137)||(4478111-4478247)
chr7 (9-137)||(32004612-32004740)
chr7 (9-137)||(37787186-37787314)
chr7 (18-137)||(23952728-23952848)
chr7 (1-137)||(28583437-28583573)
chr7 (9-137)||(34533789-34533917)
chr7 (1-137)||(38160949-38161085)
chr7 (19-132)||(4641873-4641983)
chr7 (9-132)||(19830839-19830961)
chr7 (1-132)||(28584333-28584464)
chr7 (84-137)||(787281-787334)
chr7 (60-132)||(49064037-49064109)
[»] scaffold0295 (2 HSPs)
scaffold0295 (1-137)||(4791-4927)
scaffold0295 (21-132)||(5222-5333)
[»] chr2 (40 HSPs)
chr2 (1-137)||(11090519-11090655)
chr2 (1-137)||(22374318-22374454)
chr2 (1-137)||(40815756-40815892)
chr2 (1-132)||(28616616-28616747)
chr2 (1-135)||(14432142-14432276)
chr2 (1-137)||(239351-239486)
chr2 (9-137)||(26538498-26538626)
chr2 (1-132)||(26538100-26538231)
chr2 (1-132)||(40027143-40027274)
chr2 (3-137)||(3025464-3025597)
chr2 (9-138)||(22374744-22374873)
chr2 (1-137)||(18451242-18451378)
chr2 (1-132)||(20444752-20444883)
chr2 (1-137)||(1978106-1978242)
chr2 (9-136)||(40027559-40027686)
chr2 (9-132)||(40815348-40815471)
chr2 (1-132)||(43058336-43058467)
chr2 (1-132)||(35781074-35781205)
chr2 (20-137)||(11090950-11091067)
chr2 (9-132)||(18450833-18450956)
chr2 (10-137)||(20440451-20440578)
chr2 (9-137)||(1978528-1978656)
chr2 (9-137)||(7446765-7446893)
chr2 (1-133)||(8425771-8425903)
chr2 (9-132)||(28617033-28617156)
chr2 (18-137)||(28847123-28847242)
chr2 (1-132)||(35779711-35779842)
chr2 (9-137)||(43058752-43058879)
chr2 (9-128)||(239771-239890)
chr2 (1-132)||(7446345-7446475)
chr2 (9-133)||(8425357-8425480)
chr2 (1-132)||(8972240-8972371)
chr2 (1-132)||(15551502-15551633)
chr2 (9-132)||(3025882-3026003)
chr2 (9-132)||(14432560-14432683)
chr2 (9-132)||(15552473-15552595)
chr2 (1-136)||(3824120-3824255)
chr2 (61-133)||(3822923-3822995)
chr2 (84-132)||(4355758-4355806)
chr2 (84-132)||(42192738-42192786)
[»] chr1 (42 HSPs)
chr1 (1-146)||(18984108-18984253)
chr1 (1-132)||(50970689-50970820)
chr1 (1-132)||(5540229-5540360)
chr1 (1-132)||(29306956-29307087)
chr1 (1-132)||(29869623-29869754)
chr1 (1-132)||(33144330-33144461)
chr1 (1-137)||(9018971-9019107)
chr1 (1-136)||(5962989-5963124)
chr1 (1-136)||(15173095-15173230)
chr1 (1-132)||(15646606-15646737)
chr1 (1-132)||(17433219-17433350)
chr1 (1-132)||(21856454-21856585)
chr1 (9-132)||(17433634-17433757)
chr1 (18-132)||(8678544-8678658)
chr1 (9-132)||(5539819-5539942)
chr1 (1-132)||(8678953-8679083)
chr1 (9-132)||(18984538-18984661)
chr1 (9-132)||(29307361-29307484)
chr1 (9-132)||(29870038-29870161)
chr1 (1-132)||(39154022-39154153)
chr1 (18-137)||(50970276-50970395)
chr1 (1-137)||(26859471-26859606)
chr1 (9-132)||(4636390-4636513)
chr1 (18-137)||(15646190-15646309)
chr1 (9-132)||(39154439-39154562)
chr1 (18-132)||(26859062-26859176)
chr1 (9-127)||(33143925-33144043)
chr1 (9-137)||(15173513-15173640)
chr1 (20-132)||(21856045-21856157)
chr1 (9-137)||(9019382-9019510)
chr1 (9-132)||(52268293-52268416)
chr1 (9-132)||(5962581-5962704)
chr1 (19-132)||(52269177-52269290)
chr1 (49-137)||(2733416-2733504)
chr1 (4-75)||(4636033-4636103)
chr1 (60-132)||(47826967-47827039)
chr1 (35-127)||(47827033-47827125)
chr1 (9-132)||(17112285-17112407)
chr1 (54-132)||(50419725-50419803)
chr1 (84-133)||(17641864-17641913)
chr1 (9-137)||(44802591-44802719)
chr1 (84-132)||(50304442-50304490)
[»] chr8 (33 HSPs)
chr8 (1-137)||(19176701-19176837)
chr8 (1-136)||(33328157-33328292)
chr8 (1-137)||(11656453-11656589)
chr8 (1-137)||(41681132-41681267)
chr8 (1-137)||(31133218-31133354)
chr8 (1-132)||(9930068-9930199)
chr8 (9-132)||(13225058-13225181)
chr8 (1-137)||(12571861-12571998)
chr8 (1-131)||(13224645-13224774)
chr8 (3-132)||(9178049-9178177)
chr8 (9-137)||(19176288-19176416)
chr8 (1-137)||(44831656-44831792)
chr8 (18-132)||(9928912-9929026)
chr8 (9-135)||(12572270-12572396)
chr8 (18-132)||(41681562-41681676)
chr8 (9-137)||(34540967-34541095)
chr8 (9-132)||(11656876-11656999)
chr8 (9-132)||(31133639-31133762)
chr8 (9-132)||(44831250-44831373)
chr8 (9-137)||(33742920-33743047)
chr8 (9-132)||(33328559-33328682)
chr8 (1-137)||(10918124-10918260)
chr8 (27-138)||(11336959-11337070)
chr8 (9-138)||(4629794-4629923)
chr8 (1-134)||(4630203-4630330)
chr8 (1-82)||(33743330-33743411)
chr8 (8-124)||(8073970-8074085)
chr8 (1-56)||(43958264-43958319)
chr8 (185-222)||(24569625-24569662)
chr8 (102-137)||(9177665-9177700)
chr8 (85-136)||(28877385-28877436)
chr8 (95-132)||(10919691-10919728)
chr8 (85-137)||(35427308-35427360)
[»] chr6 (36 HSPs)
chr6 (1-137)||(2319670-2319806)
chr6 (1-137)||(20741098-20741234)
chr6 (1-132)||(10900341-10900472)
chr6 (1-137)||(18257135-18257271)
chr6 (1-132)||(11276993-11277124)
chr6 (1-132)||(15828052-15828183)
chr6 (1-132)||(31470727-31470858)
chr6 (1-134)||(2322629-2322762)
chr6 (9-137)||(12935155-12935283)
chr6 (1-137)||(12935568-12935704)
chr6 (1-132)||(1149843-1149974)
chr6 (9-133)||(10899941-10900065)
chr6 (9-137)||(11445406-11445534)
chr6 (9-137)||(22219772-22219900)
chr6 (9-137)||(23075547-23075675)
chr6 (1-132)||(18505330-18505461)
chr6 (3-137)||(11444985-11445119)
chr6 (9-134)||(18504920-18505045)
chr6 (1-137)||(28472635-28472770)
chr6 (1-137)||(29859824-29859959)
chr6 (18-132)||(18257565-18257679)
chr6 (4-132)||(4811375-4811503)
chr6 (9-132)||(31470318-31470441)
chr6 (9-132)||(20741520-20741646)
chr6 (1-136)||(3835137-3835272)
chr6 (9-132)||(29033437-29033560)
chr6 (9-132)||(15827641-15827766)
chr6 (38-132)||(23074002-23074096)
chr6 (9-132)||(4811675-4811798)
chr6 (9-132)||(29035056-29035179)
chr6 (49-137)||(1149463-1149551)
chr6 (1-137)||(18296143-18296278)
chr6 (9-132)||(11276593-11276716)
chr6 (79-132)||(22534214-22534267)
chr6 (1-33)||(23074090-23074122)
chr6 (9-137)||(35163182-35163309)
[»] chr3 (56 HSPs)
chr3 (1-137)||(5136978-5137114)
chr3 (1-137)||(31779063-31779199)
chr3 (1-135)||(41046700-41046834)
chr3 (2-137)||(20840558-20840693)
chr3 (1-132)||(39555988-39556119)
chr3 (1-137)||(24300967-24301103)
chr3 (1-129)||(48452995-48453123)
chr3 (1-132)||(23644465-23644596)
chr3 (1-132)||(43973444-43973575)
chr3 (1-131)||(22425224-22425354)
chr3 (1-132)||(25853638-25853769)
chr3 (1-132)||(37726932-37727063)
chr3 (9-137)||(4275783-4275911)
chr3 (9-137)||(17464489-17464617)
chr3 (1-137)||(26837767-26837902)
chr3 (1-132)||(32535370-32535505)
chr3 (9-137)||(43973859-43973987)
chr3 (9-132)||(20840980-20841103)
chr3 (9-132)||(27393664-27393787)
chr3 (9-132)||(30098182-30098305)
chr3 (9-136)||(32534958-32535085)
chr3 (9-132)||(37727349-37727472)
chr3 (1-135)||(25612388-25612522)
chr3 (14-132)||(29801359-29801477)
chr3 (9-132)||(25853237-25853360)
chr3 (1-132)||(27393988-27394119)
chr3 (9-132)||(39555581-39555704)
chr3 (1-132)||(17464902-17465034)
chr3 (9-137)||(29801835-29801963)
chr3 (6-137)||(30104480-30104610)
chr3 (9-132)||(31778656-31778779)
chr3 (1-137)||(26274978-26275113)
chr3 (9-132)||(23644884-23645007)
chr3 (9-136)||(26274566-26274693)
chr3 (20-137)||(5137411-5137528)
chr3 (9-137)||(22424812-22424940)
chr3 (9-137)||(26837358-26837486)
chr3 (1-132)||(23228419-23228549)
chr3 (9-132)||(50116828-50116951)
chr3 (9-137)||(51474753-51474881)
chr3 (1-132)||(32697112-32697242)
chr3 (9-136)||(24300556-24300682)
chr3 (9-136)||(41047118-41047243)
chr3 (1-137)||(37220555-37220691)
chr3 (21-132)||(51473431-51473542)
chr3 (7-132)||(25420558-25420683)
chr3 (9-137)||(45965936-45966064)
chr3 (49-137)||(37222030-37222118)
chr3 (7-116)||(18010162-18010271)
chr3 (8-129)||(25419150-25419273)
chr3 (8-134)||(32695704-32695830)
chr3 (1-72)||(23227319-23227390)
chr3 (54-137)||(49407794-49407877)
chr3 (84-133)||(22370598-22370647)
chr3 (84-137)||(40838650-40838703)
chr3 (84-137)||(52375826-52375879)
[»] chr4 (60 HSPs)
chr4 (1-132)||(46193816-46193947)
chr4 (1-137)||(25447647-25447783)
chr4 (1-132)||(11153558-11153689)
chr4 (1-132)||(15523645-15523776)
chr4 (1-132)||(33109687-33109818)
chr4 (3-138)||(54995481-54995615)
chr4 (1-137)||(12234327-12234463)
chr4 (1-132)||(23494446-23494577)
chr4 (19-137)||(23494872-23494990)
chr4 (1-137)||(25937668-25937804)
chr4 (4-132)||(38962233-38962361)
chr4 (1-132)||(4219560-4219691)
chr4 (9-132)||(25447250-25447373)
chr4 (9-132)||(45082843-45082966)
chr4 (9-136)||(48526600-48526727)
chr4 (9-137)||(15523233-15523361)
chr4 (1-137)||(22434589-22434723)
chr4 (9-137)||(54995067-54995195)
chr4 (9-132)||(12234748-12234871)
chr4 (9-136)||(18751598-18751725)
chr4 (9-132)||(22434182-22434305)
chr4 (9-132)||(46193408-46193531)
chr4 (9-137)||(4219978-4220106)
chr4 (9-137)||(20470930-20471058)
chr4 (1-137)||(45082430-45082564)
chr4 (21-132)||(18763951-18764062)
chr4 (1-132)||(48526199-48526329)
chr4 (4-137)||(51020795-51020928)
chr4 (9-137)||(33109883-33110011)
chr4 (1-136)||(2118707-2118841)
chr4 (1-132)||(22170348-22170478)
chr4 (9-132)||(25938090-25938213)
chr4 (9-132)||(2118296-2118419)
chr4 (9-132)||(11153149-11153272)
chr4 (9-137)||(51021215-51021342)
chr4 (1-137)||(48713757-48713893)
chr4 (1-132)||(20958272-20958401)
chr4 (1-117)||(43243692-43243807)
chr4 (1-136)||(16690935-16691070)
chr4 (1-132)||(44892559-44892690)
chr4 (7-117)||(43281208-43281317)
chr4 (1-137)||(48293592-48293728)
chr4 (18-132)||(35363028-35363143)
chr4 (7-132)||(48294959-48295085)
chr4 (3-128)||(20957196-20957321)
chr4 (1-137)||(48708293-48708429)
chr4 (9-118)||(12503453-12503562)
chr4 (7-132)||(44890520-44890645)
chr4 (9-132)||(10258306-10258429)
chr4 (1-67)||(12503847-12503913)
chr4 (65-132)||(16318251-16318318)
chr4 (1-132)||(16691483-16691613)
chr4 (7-77)||(43242328-43242398)
chr4 (1-74)||(44220788-44220861)
chr4 (27-132)||(55189531-55189636)
chr4 (42-137)||(229159-229254)
chr4 (8-129)||(30597939-30598059)
chr4 (79-136)||(229649-229706)
chr4 (84-132)||(44219378-44219426)
chr4 (84-132)||(55677453-55677501)
[»] scaffold0273 (2 HSPs)
scaffold0273 (1-138)||(4618-4755)
scaffold0273 (9-96)||(4242-4329)
[»] scaffold0951 (2 HSPs)
scaffold0951 (1-137)||(1665-1801)
scaffold0951 (9-137)||(2086-2214)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-137)||(134084-134220)
[»] scaffold1223 (2 HSPs)
scaffold1223 (1-132)||(756-886)
scaffold1223 (9-132)||(1160-1283)
[»] scaffold0432 (2 HSPs)
scaffold0432 (1-132)||(10284-10414)
scaffold0432 (28-133)||(9934-10039)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-132)||(64305-64436)
scaffold0007 (20-136)||(64735-64851)
[»] scaffold0417 (2 HSPs)
scaffold0417 (1-116)||(10640-10755)
scaffold0417 (9-132)||(11042-11165)
[»] scaffold0176 (2 HSPs)
scaffold0176 (1-129)||(18841-18968)
scaffold0176 (38-132)||(19069-19163)
[»] scaffold0113 (1 HSPs)
scaffold0113 (9-131)||(28662-28784)
[»] scaffold0027 (2 HSPs)
scaffold0027 (1-137)||(42570-42705)
scaffold0027 (9-136)||(42168-42295)
[»] scaffold1585 (1 HSPs)
scaffold1585 (1-132)||(570-701)
[»] scaffold0057 (2 HSPs)
scaffold0057 (9-134)||(61877-62002)
scaffold0057 (61-137)||(61026-61102)
[»] scaffold0076 (1 HSPs)
scaffold0076 (32-135)||(8451-8554)
[»] scaffold0157 (2 HSPs)
scaffold0157 (9-118)||(16915-17024)
scaffold0157 (1-67)||(16564-16630)
[»] scaffold1696 (1 HSPs)
scaffold1696 (19-131)||(454-565)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-80)||(7699-7778)


Alignment Details
Target: chr5 (Bit Score: 158; Significance: 5e-84; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 136 - 317
Target Start/End: Original strand, 23115796 - 23115977
Alignment:
Q  136 tacctataatgtcttaactgaacataaaaacaatgggttgcaaacgatttggtcaacttttccaaacgttgcattataaactttattgtatatatgtccc 235  Q
    |||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  23115796 tacctataatgtcttaactgaacatagaaacaacgggttgcaaatgatttggtcaacttttccaaacattgcattataaattttattgtatatatgtccc 23115895  T
Q  236 tttagtaagatatcatatcttgaaaatccccaaaaataaaactctcaatttataccatacttatatatttgagaaatgtttt 317  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23115896 cttagtaagatatcatatcttgaaaatccccaaaaataaaactctcaatttataccatacttatatatttgagaaatgtttt 23115977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 24362247 - 24362384
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  24362247 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttattctgttttaaaagggcaggaccagtttcgtgagta 24362346  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacctac 138  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  24362347 ggccaaaatacgaggaccaaaagtgtaattaagcctac 24362384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 2865166 - 2865302
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2865166 tggagaataaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 2865265  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  2865266 ggccaaaacacgaggaccaaaagtgtaattaagccta 2865302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 18183380 - 18183516
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18183380 tggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 18183479  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  18183480 ggccaaaacacgaggaccaaaagtgtaattaagccta 18183516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 5819340 - 5819471
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  5819340 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 5819439  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  5819440 ggccaaaacacgaggaccaaaagtgtaattaa 5819471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 8647572 - 8647441
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  8647572 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaacggcaggaccagtttcgtgagta 8647473  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  8647472 ggccaaaacacgaggaccaaaagtgtaattaa 8647441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 19359270 - 19359139
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  19359270 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagta 19359171  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||||| |||||||||||||||||||||    
T  19359170 ggccaaaacaagaggaccaaaagtgtaattaa 19359139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 15372284 - 15372420
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||| |||||||||||  |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15372284 tggaaaataaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 15372383  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||||||||    
T  15372384 ggccaaaacacgaggaccaaaagtgtaattaaaccta 15372420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 29455153 - 29455284
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  29455153 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagta 29455252  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    | ||||||||||||||||||| ||||||||||    
T  29455253 gaccaaaacacgaggaccaaaggtgtaattaa 29455284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 14215654 - 14215790
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  14215654 tggagaataaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagta 14215753  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    || ||||||||||||||||||| ||||||||| ||||    
T  14215754 ggtcaaaacacgaggaccaaaattgtaattaagccta 14215790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 18183096 - 18182968
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18183096 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 18182997  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||| |||||||||||||||||||||||    
T  18182996 cacgatgaccaaaagtgtaattaaaccta 18182968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 5819055 - 5818927
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5819055 aaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaa 5818956  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||    
T  5818955 cacgaggaccaaaagtgtaattaaaccta 5818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 8461064 - 8460928
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  8461064 tggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 8460965  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||| |||| ||||||||||| |||||| ||||    
T  8460964 ggccaaaatacgatgaccaaaagtggaattaagccta 8460928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 15709104 - 15708969
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  15709104 tggagaataaaatggggg-taggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcataaccagtttcgtgagta 15709006  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  15709005 ggccaaaacactaggaccaaaagtgtaattaagccta 15708969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 19359555 - 19359683
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19359555 aaaataggaggtaggacgaaaaatccaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaa 19359654  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  19359655 cacgaggaccaaaagtgtaattaagccta 19359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 164602 - 164738
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  164602 tggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttagtgagtt 164701  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||| ||||| ||||| | ||||||| ||||    
T  164702 ggccaaaacatgaggatcaaaattataattaagccta 164738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 24361971 - 24361843
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| || |||||||||| |||    
T  24361971 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggta 24361872  T
Q  101 ggccaaaacacgaggaccaaaagtgtaat 129  Q
    |||||||||| | ||||||||||||||||    
T  24361871 ggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 8647866 - 8647985
Alignment:
Q  18 ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggac 117  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  8647866 ggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggac 8647965  T
Q  118 caaaagtgtaattaaaccta 137  Q
    ||||||||||||||| ||||    
T  8647966 caaaagtgtaattaagccta 8647985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 24325346 - 24325218
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||| || |||||||||| |||    
T  24325346 tggagaataaaatggggggtaggacgaaaaatgcgacaaaaatgatacttgaaggaccattttgttctgttttacaagggcatgatcagtttcgtgggta 24325247  T
Q  101 ggccaaaacacgaggaccaaaagtgtaat 129  Q
    |||||||||| | ||||||||||||||||    
T  24325246 ggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 2864880 - 2864757
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| || || |||||||||||||||||||    
T  2864880 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcatgatcaatttcgtgagtaggccaaaa 2864781  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||| ||||||||||||||||||||    
T  2864780 cacaaggaccaaaagtgtaattaa 2864757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 8461350 - 8461473
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||    
T  8461350 aaaataggaggtatgacgaaaaatgcagcaaaaatgataattgaaggaccgttttgttctgttttaaaagagcaggaacagtttcgtgagtaggccaaaa 8461449  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  8461450 cacgaggaccaaaagtgtaattaa 8461473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 14215367 - 14215244
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| |  |||||||||||||||| |||||||    
T  14215367 aaaataggaggtaggacgaaaaatgcaacaaaaatgataactgaaggacctttttgttctgttttaaaagggtataaccagtttcgtgagtaagccaaaa 14215268  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  14215267 cacgaggaccaaaagtgtaattaa 14215244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 14463932 - 14464067
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||| |||| ||||||||||||||||| |||||||||| |||||||| ||||||||||| |||||||||| ||| |  |||||||||||||    
T  14463932 tggagaataaaattgggg-taggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttctattttaaaaggacaaaattagtttcgtgagta 14464030  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  14464031 ggccaaaacacgaggactaaaagtgtaattaagccta 14464067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 164316 - 164194
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||| ||||| ||||| |||||||||||| |||| |||||||||| ||||||||||||||||||| |||||    
T  164316 aaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaatgaccgttttgttttgttataaaagggcaggaccagtttcgtgagtaggtcaaaa 164218  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  164217 cacgaggaccaaaagtgtaattaa 164194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 29454866 - 29454743
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  29454866 aaaataggaggtaggacgaaaaatgcagcaaaaatgataattcaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtaggccaaaa 29454767  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||| | ||||||||||| ||||||    
T  29454766 cacaatgaccaaaagtgaaattaa 29454743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 24331676 - 24331557
Alignment:
Q  20 taggacgaaaaatgcaacaaaaat--gatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggac 117  Q
    ||||| |||||||||||||||||   |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  24331676 taggatgaaaaatgcaacaaaaaatagataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggac 24331577  T
Q  118 caaaagtgtaattaaaccta 137  Q
    ||||||||||||||| ||||    
T  24331576 caaaagtgtaattaagccta 24331557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 7349436 - 7349559
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    |||||||||||||||| ||||| ||||||||||||||||  |||||||  |||||||| ||||||||||| ||| ||||| |||||||||||| ||||||    
T  7349436 aaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaatttcgtgagtagaccaaaa 7349535  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  7349536 cacgaggaccaaaagtgtaattaa 7349559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 16018721 - 16018592
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||| ||||||| ||||||||| |||||| ||| |||||||||||||||||||| ||||||||||||| || || |||||||| ||    
T  16018721 tggagaataaaatggggg-taggacggaaaatgcaataaaaat-ataattgaaggaccgttttgttctattttaaaagggcatgatcaatttcgtgaata 16018624  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||| ||||||||||||||||||    
T  16018623 ggccaaaacacgaagaccaaaagtgtaattaa 16018592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 4222147 - 4222264
Alignment:
Q  15 gggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgag 114  Q
    |||||||||||||||||||||| ||||||||||  |||| |||  ||||||||||||||||||||||| ||||| ||||||||| || ||||||||||||    
T  4222147 gggggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgag 4222246  T
Q  115 gaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||    
T  4222247 gaccaaaagtgtaattaa 4222264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 16019006 - 16019134
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||||||||||||| |||||||||||||| |||||| ||| |||| |||| ||||||||| ||| ||||| ||||||||||| |||||||    
T  16019006 aaaataggaggtaggacgaaaaatacaacaaaaatgataattgaagaaccattttattctattttaaaagagcaggaccaatttcgtgagtatgccaaaa 16019105  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    || ||||||||||||||||||||||||||    
T  16019106 catgaggaccaaaagtgtaattaaaccta 16019134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 7348685 - 7348562
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    |||||||||||||||||||||| ||||||||||||||||   ||||||  |||||||||||||||||||||||| ||||| |||||||||||| | ||||    
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    || ||||||||||| |||||||||    
T  7348585 catgaggaccaaaaatgtaattaa 7348562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 25000508 - 25000631
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||| |||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||  || ||||| |||||||||||||||||||    
T  25000508 aaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgttttaaaagaacatgaccaatttcgtgagtaggccaaaa 25000607  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    || || ||||||||||||||||||    
T  25000608 catgaagaccaaaagtgtaattaa 25000631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 15371983 - 15371874
Alignment:
Q  22 ggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaa 121  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||  ||||||||||| |||||| ||||||| ||||    
T  15371983 ggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaaa 15371885  T
Q  122 agtgtaattaa 132  Q
    |||||||||||    
T  15371884 agtgtaattaa 15371874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 25000224 - 25000112
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||| || ||||||| |||| ||||||||||| |||||| |||||  ||||||||||    
T  25000224 tggagaataaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggaccattttattctgttttaacagggcatgaccaaattcgtgagta 25000125  T
Q  101 ggccaaaacacga 113  Q
    |||||||||||||    
T  25000124 ggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 15709388 - 15709510
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||||||||||||||||||| ||||||||  | |||||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||    
T  15709388 aaaataggaggtaggacgaaaaatgcaacagaaatgataactaaaggaccgttttgttctgtttt-aaagggcatgactagtttcatgagtaggccaaaa 15709486  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||| | ||||||||||||||||||    
T  15709487 cacaatgaccaaaagtgtaattaa 15709510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 6019181 - 6019314
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaa-atgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagt 99  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||||||| || || ||| |||||||||||||||||||| |||||| |||||||||||||    
T  6019181 tggaggataaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgtgagt 6019280  T
Q  100 aggccaaaacacgaggaccaaaagtgtaattaaac 134  Q
    | ||||||||| || |||||||| |||||| ||||    
T  6019281 a-gccaaaacatgatgaccaaaaatgtaatcaaac 6019314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 24331971 - 24332106
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaa-tgcaacaaaaa-tgatacttgaaggaccgttttgttctgtttt-aaaagggcaagaccagtttcgtga 97  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||| |||| |||| || |||||||||||    
T  24331971 tggagaatagaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcaggaccgttttgttctgttttaaaaaaggcaggatcagtttcgtga 24332070  T
Q  98 gtaggccaaaacacgaggacc-aaaagtgtaattaa 132  Q
    ||| ||||||||| || |||| ||||||||||||||    
T  24332071 gtatgccaaaacatgatgaccaaaaagtgtaattaa 24332106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 4623267 - 4623151
Alignment:
Q  16 ggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgagg 115  Q
    ||||||||||| ||||||| | |||||||||| |||||||||  |||||||||||||||||  |||| ||||| ||||||||||| | |||||||||| |    
T  4623267 ggggtaggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcgtgagtaagtcaaaacacgatg 4623168  T
Q  116 accaaaagtgtaattaa 132  Q
    |||||||||||||||||    
T  4623167 accaaaagtgtaattaa 4623151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 4219796 - 4219666
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||  | ||||||   ||||||||||||||||| |||| ||||| ||| || | ||    
T  4219796 tggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgtaaata 4219698  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    | |||||||||||||| |||||||||||||||    
T  4219697 gcccaaaacacgaggatcaaaagtgtaattaa 4219666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 4624642 - 4624757
Alignment:
Q  7 ataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaa 106  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||| ||  |||||||| |||||||||  | || ||||| |||||||||||||  ||    
T  4624642 ataaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgtgagtaggttaa 4624741  T
Q  107 aacacgaggaccaaaa 122  Q
    ||||||||||| ||||    
T  4624742 aacacgaggacgaaaa 4624757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 6018431 - 6018317
Alignment:
Q  17 gggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgagga 116  Q
    ||||||||| |||| |||||||||||||||| |||||| |   |||||||||||||||||||| || ||||||||||||||||||  ||||||||||| |    
T  6018431 gggtaggactaaaactgcaacaaaaatgataattgaag-ataattttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaaaacacgagaa 6018333  T
Q  117 ccaaaagtgtaattaa 132  Q
    |||||| |||||||||    
T  6018332 ccaaaaatgtaattaa 6018317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13814139 - 13814224
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttga-----aggaccgttttgttctgttttaaaagggca 82  Q
    ||||| ||||||||||| |||||||||||| |||||||||||||||| ||||     | ||| ||||||||||| ||||||||||||    
T  13814139 tggaggataaaatgggg-gtaggacgaaaagtgcaacaaaaatgataattgaaagacatgacagttttgttctgatttaaaagggca 13814224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 14462730 - 14462686
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaa 53  Q
    ||||| || |||||||||||||||||||||||||||||| |||||    
T  14462730 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaa 14462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 15029780 - 15029857
Alignment:
Q  60 ttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||  ||| |||| || ||||||| |||||||||| || |||||   ||||||||||||||||||||| ||||    
T  15029780 ttttgttcgatttaaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaagccta 15029857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 20266335 - 20266463
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| ||||||||||| |||| | ||||||  |||||| || | ||||  ||||||||  ||| |||  | || ||||| |||||| ||  || |||||    
T  20266335 aaaatagggggtaggactaaaactacaacaaccatgatagtttagggacgattttgttcgatttgaaagagacatgaccattttcgtaagctggtcaaaa 20266434  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
     |||||||||||||||| |||||||||||    
T  20266435 tacgaggaccaaaagtgcaattaaaccta 20266463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 4e-69; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 19830554 - 19830418
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19830554 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 19830455  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||||||||    
T  19830454 ggccaaaacacgaggaccaaaagtgtaattaaaccta 19830418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 19590659 - 19590528
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19590659 tggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 19590560  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  19590559 ggccaaaacacgaggaccaaaagtgtaattaa 19590528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 37786901 - 37786770
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||| ||||    
T  37786901 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccagtttcgtaagta 37786802  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  37786801 ggccaaaacacgaggaccaaaagtgtaattaa 37786770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 35289314 - 35289448
Alignment:
Q  3 gagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtagg 102  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35289314 gagaataaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagg 35289413  T
Q  103 ccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||| ||||||||||||||| ||||    
T  35289414 ccaaaacacgaggatcaaaagtgtaattaagccta 35289448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 34534202 - 34534339
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  34534202 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaatgggcaggatcagtttcgtgagta 34534301  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacctac 138  Q
    |||||||||||||| ||||||||| ||||||| |||||    
T  34534302 ggccaaaacacgagaaccaaaagtataattaagcctac 34534339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 4641574 - 4641439
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||| ||||| ||| |||||||||||||||||    
T  4641574 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttatgtttcaaaagagcaggaccagtttcgtgagta 4641475  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacct 136  Q
     |||||||||||||||||||||||||||||||||||    
T  4641474 agccaaaacacgaggaccaaaagtgtaattaaacct 4641439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 29100262 - 29100397
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||| |||||||    
T  29100262 tggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccaattttgtgagta 29100361  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacct 136  Q
    | ||||||||||||||||||||||||||||||||||    
T  29100362 gaccaaaacacgaggaccaaaagtgtaattaaacct 29100397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 2659251 - 2659387
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||| ||    
T  2659251 tggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaagaccagtttcatgaata 2659350  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||| |||||||||||| ||||||||| ||||    
T  2659351 ggccaaaacgcgaggaccaaaattgtaattaagccta 2659387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 19590944 - 19591072
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19590944 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaa 19591043  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||| ||||||||||||||||| ||||    
T  19591044 cacgagtaccaaaagtgtaattaagccta 19591072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 32005025 - 32005156
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  32005025 tggagaataaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctattttaaaagggcatgaccagtttcgtgagta 32005124  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
     ||||||||| |||||||||||||||||||||    
T  32005125 tgccaaaacatgaggaccaaaagtgtaattaa 32005156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 38858777 - 38858646
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| |||||||||||||||||    
T  38858777 tggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagta 38858678  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
     ||||||||||||||||||||||||| |||||    
T  38858677 tgccaaaacacgaggaccaaaagtgttattaa 38858646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 38859060 - 38859188
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  38859060 aaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 38859159  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  38859160 cacgaggaccaaaagtgtaattaagccta 38859188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 23953140 - 23953268
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  23953140 tggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttgaaagggcgggaccagtttcgtgagta 23953239  T
Q  101 ggccaaaacacgaggaccaaaagtgtaat 129  Q
    |  ||||||||||||||||||| ||||||    
T  23953240 gatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 29099976 - 29099863
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  29099976 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaa 29099877  T
Q  109 cacgaggaccaaaa 122  Q
    ||||||||||||||    
T  29099876 cacgaggaccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 35289019 - 35288906
Alignment:
Q  19 gtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacc 118  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  35289019 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgacc 35288920  T
Q  119 aaaagtgtaattaa 132  Q
    ||||||||||||||    
T  35288919 aaaagtgtaattaa 35288906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 2658965 - 2658837
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||| ||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  2658965 aaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaa 2658866  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||| |||||||||||||| ||||    
T  2658865 cacgaggacaaaaagtgtaattaagccta 2658837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 4478111 - 4478247
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||| ||| || ||||||||||||||||||||||||| |||||||||  | || |||||||||||||||||| |||||||||||||||||    
T  4478111 tggagaataaaatgagggataagacgaaaaatgcaacaaaaatgataattgaaggacaatgttattctgttttaaaagggcaggaccagtttcgtgagta 4478210  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||| |||||||||| |||||||||    
T  4478211 ggccaaaacacgaggatcaaaagtgtacttaaaccta 4478247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 32004740 - 32004612
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| || || |||||||||||||||||||    
T  32004740 aaaataggaggtagggcgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggatcaatttcgtgagtaggccaaaa 32004641  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  32004640 cacgaggaccaaaagtgtaattaagccta 32004612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 37787186 - 37787314
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||| ||| |||||||||||||||||||||||||    
T  37787186 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaa 37787285  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||| ||||||| ||||    
T  37787286 cacgaggaccaaaagtataattaagccta 37787314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 23952848 - 23952728
Alignment:
Q  18 ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta-ggccaaaacacgagga 116  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||| || |||||||||||||    
T  23952848 ggtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgagga 23952749  T
Q  117 ccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||| ||||    
T  23952748 ccaaaagtgtaattaagccta 23952728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 28583573 - 28583437
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||| || |||||||||||||||  |||| | || ||||||    
T  28583573 tggaggataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatgagta 28583474  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  28583473 ggccaaaacacgaggaccaaaagtgtaattaagccta 28583437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 34533917 - 34533789
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||||||| |||||||||||||||||||| ||||| |||| |||| |||||||||||||| ||| |||||||||||||||||||||||||    
T  34533917 aaaataggaggtaggacggaaaatgcaacaaaaatgataattgaatgaccattttattctgttttaaaagagcatgaccagtttcgtgagtaggccaaaa 34533818  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  34533817 cacgaggaccaaaagtgtaattaagccta 34533789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 38161085 - 38160949
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| ||| |||||||||  ||||||||||||||||||||||| ||  | |||||||||||    
T  38161085 tggaggataaaatggggagtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattattttcgtgagta 38160986  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  38160985 ggccaaaacccgaggaccaaaagtgtaattaagccta 38160949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 4641873 - 4641983
Alignment:
Q  19 gtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacc 118  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||   |||||||||||||||||||||||||    
T  4641873 gtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggacaggaccagt---gtgagtaggccaaaacacgaggacc 4641969  T
Q  119 aaaagtgtaattaa 132  Q
    ||||||||||||||    
T  4641970 aaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 19830839 - 19830961
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||| ||||||||||||||||||||| |||||| ||||||||||| |||||||||||| || ||||||||| |||||||||||||||    
T  19830839 aaaataggaggtaggac-aaaaatgcaacaaaaatgataattgaagtaccgttttgttatgttttaaaaggacaggaccagttttgtgagtaggccaaaa 19830937  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  19830938 cacgaggaccaaaagtgtaattaa 19830961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 28584333 - 28584464
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||||| |||||||||  |||||||||||||||||||| || ||||| |||||||| ||    
T  28584333 tggaggataaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttcgtgaata 28584432  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||| ||||||||| ||||||||||||||    
T  28584433 ggccaaagcacgaggacgaaaagtgtaattaa 28584464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 787281 - 787334
Alignment:
Q  84 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||| |||||||||| || ||||| ||||| ||||||||||||||||||||||    
T  787281 gaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaaaccta 787334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 49064109 - 49064037
Alignment:
Q  60 ttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||| ||| |||  ||||| |||| |||||||||  || ||||| |||||||||||||||||||||||    
T  49064109 ttttgttctatttgaaagaggcaataccattttcgtgagctggtcaaaatacgaggaccaaaagtgtaattaa 49064037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 4927 - 4791
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4927 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagta 4828  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  4827 ggccaaaacacgaggaccaaaagtgtaattaagccta 4791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 5222 - 5333
Alignment:
Q  21 aggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaa 120  Q
    ||||||||||||||||||||||||||| |||||  |||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  5222 aggacgaaaaatgcaacaaaaatgataattgaattaccgttttattctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaa 5321  T
Q  121 aagtgtaattaa 132  Q
    ||||||||||||    
T  5322 aagtgtaattaa 5333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 11090655 - 11090519
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  11090655 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagta 11090556  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||||||||    
T  11090555 ggccaaaacacgaggaccaaaagtgtaattaaaccta 11090519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 22374454 - 22374318
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22374454 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagta 22374355  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  22374354 ggccaaaacacgaggaccaaaagtgtaattaagccta 22374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 40815756 - 40815892
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  40815756 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggccgttttgttctgttttaaaagggcattaccagtttcgtgagta 40815855  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||||||||    
T  40815856 ggccaaaacacgaggaccaaaagtgtaattaaaccta 40815892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 28616747 - 28616616
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28616747 tggataataaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 28616648  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  28616647 ggccaaaacacgaggaccaaaagtgtaattaa 28616616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 14432276 - 14432142
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||| ||||||    
T  14432276 tggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgttttgttatattttaaaagggcaagaccagtttcatgagta 14432177  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacc 135  Q
    |||||||||||||||||||||||||||||||||||    
T  14432176 ggccaaaacacgaggaccaaaagtgtaattaaacc 14432142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 239486 - 239351
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  239486 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaa-ggcaggaccagtttcgtgagta 239388  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  239387 ggccaaaacacgatgaccaaaagtgtaattaagccta 239351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 26538498 - 26538626
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  26538498 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaagagggcaggaccagtttcgtgagtaggccaaaa 26538597  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  26538598 cacgaggaccaaaagtgtaattaagccta 26538626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 26538231 - 26538100
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  26538231 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgctttgttctgttttaaaagggcagaaccagtttcgtgagta 26538132  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
     |||||||||||||||||||||||||||||||    
T  26538131 agccaaaacacgaggaccaaaagtgtaattaa 26538100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 40027274 - 40027143
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40027274 tggagaataaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagta 40027175  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||| ||||||||||||||||||    
T  40027174 ggccaaaacacgatgaccaaaagtgtaattaa 40027143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 3025597 - 3025464
Alignment:
Q  3 gagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtagg 102  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  3025597 gagaataaaatggggg-taggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtagg 3025499  T
Q  103 ccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||| |||||| |||||||    
T  3025498 ccaaaacacgaggaccaaaaatgtaatcaaaccta 3025464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 22374744 - 22374873
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22374744 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccaatttcgtgagtaggccaaaa 22374843  T
Q  109 cacgaggaccaaaagtgtaattaaacctac 138  Q
    |||||||||||||||||||||||| |||||    
T  22374844 cacgaggaccaaaagtgtaattaagcctac 22374873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 18451242 - 18451378
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||| |||||||||||| ||||    
T  18451242 tggagaataaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggactattttgttctgttttaaaagggcaggaccagtttcgtaagta 18451341  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  18451342 ggccaaaacacgaggaccaaaagtgtaattaagccta 18451378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 20444883 - 20444752
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  20444883 tggaggataaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtt 20444784  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  20444783 ggccaaaacacgaggaccaaaagtgtaattaa 20444752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 1978242 - 1978106
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1978242 tggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 1978143  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||||| |||||||||| ||||||||| ||||    
T  1978142 ggccaaaacacaaggaccaaaaatgtaattaagccta 1978106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 40027559 - 40027686
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  40027559 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 40027658  T
Q  109 cacgaggaccaaaagtgtaattaaacct 136  Q
    ||||||||||||||||||||||||||||    
T  40027659 cacgaggaccaaaagtgtaattaaacct 40027686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 40815471 - 40815348
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40815471 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttatgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 40815372  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  40815371 cacgaggaccaaaagtgtaattaa 40815348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 43058467 - 43058336
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||| ||||||     
T  43058467 tggagaataaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccagtttagtgagtt 43058368  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||||| |||||||||||||||    
T  43058367 ggccaaaacacgaggatcaaaagtgtaattaa 43058336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 35781074 - 35781205
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||| ||||| |||||||||||    
T  35781074 tggaggataaaatgggggttaggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttcgtgagta 35781173  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||||| |||||||||||||||    
T  35781174 ggccaaaacacgaggatcaaaagtgtaattaa 35781205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 11090950 - 11091067
Alignment:
Q  20 taggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacca 119  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11090950 taggacgaaaaatacaacaataatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggacca 11091049  T
Q  120 aaagtgtaattaaaccta 137  Q
    ||||||||||||| ||||    
T  11091050 aaagtgtaattaagccta 11091067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 18450956 - 18450833
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  18450956 aaaataggaggtaggactaaaaatgcaaaaaaaatgataattgaaggaccgttttgttctgttttaaaagggctggaccagtttcgtgagtaggccaaaa 18450857  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  18450856 cacgaggaccaaaagtgtaattaa 18450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 20440451 - 20440578
Alignment:
Q  10 aaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaac 109  Q
    ||||||||| ||||||||||| ||||||||||||||||  |||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  20440451 aaatgggggataggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgagttggccaaaac 20440550  T
Q  110 acgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||||||||||||||||| ||||    
T  20440551 acgaggaccaaaagtgtaattaagccta 20440578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 1978528 - 1978656
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  1978528 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 1978627  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    ||| |||||||||||||||||||| ||||    
T  1978628 cacaaggaccaaaagtgtaattaagccta 1978656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 7446765 - 7446893
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||    
T  7446765 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaaggcaaaa 7446864  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||| ||||| ||||||||| ||||    
T  7446865 cacgaggatcaaaaatgtaattaagccta 7446893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 8425771 - 8425903
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| ||||| |||||||||||    
T  8425771 tggagaataaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgttctattttaaaagggcaggaccaatttcgtgagta 8425870  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaa 133  Q
    | ||||||||| || ||||||||||||||||||    
T  8425871 gaccaaaacacaagaaccaaaagtgtaattaaa 8425903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 28617033 - 28617156
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  28617033 aaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaa 28617132  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  28617133 cacgaggaccaaaagtgtaattaa 28617156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 28847123 - 28847242
Alignment:
Q  18 ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggac 117  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  28847123 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggac 28847222  T
Q  118 caaaagtgtaattaaaccta 137  Q
    ||||| ||||||||| ||||    
T  28847223 caaaaatgtaattaagccta 28847242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 35779842 - 35779711
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||  |||||||||||||||||| |||| ||||| |||||||||||    
T  35779842 tggaggataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttcgtgagta 35779743  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
     | |||||||||||||||||||||||||||||    
T  35779742 tgtcaaaacacgaggaccaaaagtgtaattaa 35779711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 43058752 - 43058879
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  43058752 aaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccattttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaa 43058850  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||| ||||||||||||||| ||||    
T  43058851 cacgaggatcaaaagtgtaattaagccta 43058879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 239771 - 239890
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||| ||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  239771 aaaataggaggtatgacgaaaaacgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 239870  T
Q  109 cacgaggaccaaaagtgtaa 128  Q
    ||||||||||||||||||||    
T  239871 cacgaggaccaaaagtgtaa 239890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 7446475 - 7446345
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||| || |||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||||| |||| ||||||    
T  7446475 tggagaataaaatggggg-tatgacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccaatttcatgagta 7446377  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    | |||||||||||||| |||||||||||||||    
T  7446376 gaccaaaacacgaggatcaaaagtgtaattaa 7446345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 133
Target Start/End: Complemental strand, 8425480 - 8425357
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  8425480 aaaataggaggtaggacgaaaaatgcaacacaaatgataattgaag-accgttttgttctgttttaaaaaggtaagaccaatttcgtgagtaggccaaaa 8425382  T
Q  109 cacgaggaccaaaagtgtaattaaa 133  Q
    ||| |||||||||||||||||||||    
T  8425381 cacaaggaccaaaagtgtaattaaa 8425357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 8972371 - 8972240
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| ||||||| |||||||| |||||||||||||||||||||||| ||||| |||  |||||||||||||| |||||||| ||||| ||||||||| |    
T  8972371 tggaggataaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttcgtgagca 8972272  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
     |||||||||||||||||||||||||||||||    
T  8972271 tgccaaaacacgaggaccaaaagtgtaattaa 8972240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 15551633 - 15551502
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||  ||||||||  ||||||| |||||||||| |||| ||||| |||||||||||    
T  15551633 tggaggataaaatggagggttggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccattttcgtgagta 15551534  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
      ||||||||||||||||||||||||||||||    
T  15551533 aaccaaaacacgaggaccaaaagtgtaattaa 15551502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 3025882 - 3026003
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||  |||| ||||||||||| |||||||    
T  3025882 aaaataggaggtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-tgttttaaaagggcagaaccaatttcgtgagtaagccaaaa 3025980  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||| |||||||||    
T  3025981 cacgaggaccaaaa-tgtaattaa 3026003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 14432560 - 14432683
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||||| |||||||||||||||||| ||| |||||| ||| |||| ||||||||||||| |||| |||||||||| ||||||||||||||    
T  14432560 aaaataggaggtaggatgaaaaatgcaacaaaaataataattgaagaaccattttattctgttttaaaatggcatgaccagtttcatgagtaggccaaaa 14432659  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||| |||||||||    
T  14432660 cacgaggaccaaaaatgtaattaa 14432683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 15552473 - 15552595
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||| |||  ||||||||||||||||||||||  || || |||||||||||||||||||    
T  15552473 aaaatggagggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcgtgagtaggccaaaa 15552571  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||  | ||||||||||||||||||    
T  15552572 cattatgaccaaaagtgtaattaa 15552595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 3824120 - 3824255
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| |||||||||||| ||| || |||| ||||| ||| ||||||    | | || |||||||||  ||| ||||||||| ||||| ||||||||||     
T  3824120 tggaggataaaatgggggttagaactaaaattgcaaaaaacatgatagcatatgaactgttttgttcgatttaaaaagggcatgaccaatttcgtgagtt 3824219  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacct 136  Q
    ||  ||||  ||| |||||||||| |||||||||||    
T  3824220 ggttaaaatgcgatgaccaaaagtataattaaacct 3824255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 3822995 - 3822923
Alignment:
Q  61 tttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaa 133  Q
    ||||||| |||| ||||||||| || || |||| ||||| ||  ||||  |||||||||||||||||||||||    
T  3822995 tttgttcggtttaaaaagggcaggatcaatttcatgagttggttaaaatgcgaggaccaaaagtgtaattaaa 3822923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 4355806 - 4355758
Alignment:
Q  84 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||| ||||||||||||| |||||  | ||||||||||||||||||||    
T  4355806 gaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaa 4355758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 42192738 - 42192786
Alignment:
Q  84 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||| |||||||||| || |||||  ||||||||||||||||||||||    
T  42192738 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 42192786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 18984253 - 18984108
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18984253 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 18984154  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacctacctataatg 146  Q
    | |||||||||||||||||||||||||||||| |||| || |||||    
T  18984153 gaccaaaacacgaggaccaaaagtgtaattaagcctatctttaatg 18984108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 50970689 - 50970820
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  50970689 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtaagta 50970788  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  50970789 ggccaaaacacgaggaccaaaagtgtaattaa 50970820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 5540229 - 5540360
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  5540229 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttcttctgttttaaaaggacaggaccagtttcgtgagta 5540328  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  5540329 ggccaaaacacgaggaccaaaagtgtaattaa 5540360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 29307087 - 29306956
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  29307087 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggacatgaccagtttcgtgagta 29306988  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||||| |||||||||||||||    
T  29306987 ggccaaaacacgaggatcaaaagtgtaattaa 29306956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 29869754 - 29869623
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29869754 tggagaataaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 29869655  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
     |||||||||||||||||||||||||||||||    
T  29869654 tgccaaaacacgaggaccaaaagtgtaattaa 29869623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 33144330 - 33144461
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  33144330 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtccattttgttctgttttaaaagggcaggaccagtttcgtgagta 33144429  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  33144430 ggccaaaacacgaggaccaaaagtgtaattaa 33144461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 9019107 - 9018971
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||  ||||||||||| ||||    
T  9019107 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgaccgttttgttctgttttaaaagggcagaaccagtttcgttagta 9019008  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  9019007 ggccaaaacacgaggaccaaaagtgtaattaagccta 9018971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 5962989 - 5963124
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||| || ||||||||||||||    
T  5962989 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagactgttttgttctattttaaaagggcatgatcagtttcgtgagta 5963088  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacct 136  Q
    ||||||||||||||||||||||||||||||||||||    
T  5963089 ggccaaaacacgaggaccaaaagtgtaattaaacct 5963124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 15173230 - 15173095
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||||||||| ||| |||||||||||||    
T  15173230 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttcaattttaaaagggcaggactagtttcgtgagta 15173131  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacct 136  Q
    ||||||||||||||||||||||||||||||||||||    
T  15173130 ggccaaaacacgaggaccaaaagtgtaattaaacct 15173095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 15646606 - 15646737
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | || ||||||||||||||    
T  15646606 tggagaataaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggatcagtttcgtgagta 15646705  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  15646706 ggccaaaacacgaggaccaaaagtgtaattaa 15646737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 17433350 - 17433219
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||| ||||||    
T  17433350 tggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcatggtcagtttcatgagta 17433251  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||||| |||||||||||||||||||||    
T  17433250 ggccaaaacatgaggaccaaaagtgtaattaa 17433219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 21856454 - 21856585
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| ||||||    
T  21856454 tggagaataaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggaccgttttgttctgttttaaaaaggcaggatcagtttcatgagta 21856553  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  21856554 ggccaaaacacgaggaccaaaagtgtaattaa 21856585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 17433634 - 17433757
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  17433634 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccagaa 17433733  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  17433734 cacgaggaccaaaagtgtaattaa 17433757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 8678658 - 8678544
Alignment:
Q  18 ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggac 117  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8678658 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggac 8678559  T
Q  118 caaaagtgtaattaa 132  Q
    |||||||||||||||    
T  8678558 caaaagtgtaattaa 8678544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 5539942 - 5539819
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  5539942 aaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 5539843  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  5539842 cacgaggaccaaaagtgtaattaa 5539819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 8678953 - 8679083
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||| |||||||| ||||||||    
T  8678953 tggagaataaaatggagg-taggacgaaaaatgcaacaaaaatgataattgaatgacctttttgttctgttttaaaagggcaggaccagttccgtgagta 8679051  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  8679052 ggccaaaacacgaggaccaaaagtgtaattaa 8679083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 18984538 - 18984661
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  18984538 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 18984637  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||| ||||||||||||||||||||    
T  18984638 cacaaggaccaaaagtgtaattaa 18984661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 29307361 - 29307484
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  29307361 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaa 29307460  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||| ||||||    
T  29307461 cacgaggaccaaaagtgcaattaa 29307484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 29870038 - 29870161
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  29870038 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcatgagtaggccaaaa 29870137  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  29870138 cacgaggaccaaaagtgtaattaa 29870161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 39154153 - 39154022
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  39154153 tggagaatagaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagta 39154054  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
     ||||||||| || ||||||||||||||||||    
T  39154053 tgccaaaacatgatgaccaaaagtgtaattaa 39154022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 50970395 - 50970276
Alignment:
Q  18 ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggac 117  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  50970395 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggac 50970296  T
Q  118 caaaagtgtaattaaaccta 137  Q
    ||||||||||||||| ||||    
T  50970295 caaaagtgtaattaagccta 50970276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 26859471 - 26859606
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||  |||||||||||||    
T  26859471 tggagaataaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtattgttctgttttaaaagggcaggattagtttcgtgagta 26859569  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    | |||||||||||||| ||||||||||||||| ||||    
T  26859570 gcccaaaacacgaggatcaaaagtgtaattaagccta 26859606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 4636390 - 4636513
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  4636390 aaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaa 4636489  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  4636490 cacgaggaccaaaagtgtaattaa 4636513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 15646309 - 15646190
Alignment:
Q  18 ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggac 117  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15646309 ggtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggac 15646210  T
Q  118 caaaagtgtaattaaaccta 137  Q
    ||||||| ||||||| ||||    
T  15646209 caaaagtataattaagccta 15646190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 39154439 - 39154562
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  39154439 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaa 39154538  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  39154539 cacgaggaccaaaagtgtaattaa 39154562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 26859176 - 26859062
Alignment:
Q  18 ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggac 117  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||| |||||    
T  26859176 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggac 26859077  T
Q  118 caaaagtgtaattaa 132  Q
    |||||||||||||||    
T  26859076 caaaagtgtaattaa 26859062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 33144043 - 33143925
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33144043 aaaataggaggtaggacgaaatatgcaaaaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaa 33143944  T
Q  109 cacgaggaccaaaagtgta 127  Q
    |||||||||||||||||||    
T  33143943 cacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 15173513 - 15173640
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  15173513 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaa-ggcaggaccagttttgtgagtaggccaaaa 15173611  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  15173612 cacgaggaccaaaagtgtaattaagccta 15173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 21856157 - 21856045
Alignment:
Q  20 taggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacca 119  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  21856157 taggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggacca 21856058  T
Q  120 aaagtgtaattaa 132  Q
    |||||||||||||    
T  21856057 aaagtgtaattaa 21856045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 9019382 - 9019510
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||  |||||||| ||||||||| |||||    
T  9019382 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaa 9019481  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  9019482 cacgaggaccaaaagtgtaattaagccta 9019510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 52268416 - 52268293
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    |||||||||||||||||||||| ||||||||||||||||  |||| ||| |||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  52268416 aaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 52268317  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
     |||||||||||||||||||||||    
T  52268316 tacgaggaccaaaagtgtaattaa 52268293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 5962704 - 5962581
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||  |||||||||||||| ||| ||| ||    
T  5962704 aaaataggaggtagaacgaaaaatgcaacaaaaatgatagttgaaagaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccataa 5962605  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||| |||||||||    
T  5962604 cacgaggaccaaaaatgtaattaa 5962581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 52269177 - 52269290
Alignment:
Q  19 gtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacc 118  Q
    |||||||||||| ||||||||||||||||  |||| |||  |||||||||||||||||||||||  |||  |||| |||||| | |||||||||||||||    
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  119 aaaagtgtaattaa 132  Q
    ||||||||||||||    
T  52269277 aaaagtgtaattaa 52269290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 2733416 - 2733504
Alignment:
Q  49 ttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||| |||||||||||| ||||||| ||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagccta 2733504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 4636103 - 4636033
Alignment:
Q  4 agaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaa 75  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4636103 agaataaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggaccg-tttgttctgttttaa 4636033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 47827039 - 47826967
Alignment:
Q  60 ttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||| | ||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 47826967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 47827033 - 47827125
Alignment:
Q  35 aacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 127  Q
    ||||||||||||| || ||||||  ||||||||||||||||||||||| ||||| ||||||||||||||||||||| |  || ||||||||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgta 47827125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 17112407 - 17112285
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||||||||||||||||| |||||||||| |||||||||  |||| |||| ||||||||||||   |||| |||| |||||||  |||||    
T  17112407 aaaataggaggtaggacgaaaaatgcaataaaaatgataattgaaggactattttattctattttaaaagggc-ctaccaatttcatgagtagatcaaaa 17112309  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    || ||| |||||||||||||||||    
T  17112308 catgagaaccaaaagtgtaattaa 17112285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 50419725 - 50419803
Alignment:
Q  54 ggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||  |||||||| |||| ||||| |||||||||| || | |||  ||| ||||||||||| ||||||    
T  50419725 ggaccgttttgttcaattttaaaaaggcaggaccaatttcgtgagttggtctaaatgcgatgaccaaaagtgcaattaa 50419803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 17641864 - 17641913
Alignment:
Q  84 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaa 133  Q
    ||||| |||||||||| || |||||  |||||||||||||||||||||||    
T  17641864 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 17641913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 44802591 - 44802719
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||| || |||| ||||| ||| |||||| || | ||||  |||||||| |||| |||  |||| ||||| |||||||||  || |||||    
T  44802591 aaaataggaggtagaactaaaactgcaaaaaacatgatagtttagggacgattttgttccgtttgaaagaggcatgaccactttcgtgagctggtcaaaa 44802690  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
      | |||||||||||||||||||| ||||    
T  44802691 tgcaaggaccaaaagtgtaattaagccta 44802719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 50304490 - 50304442
Alignment:
Q  84 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||| |||||||||| || |||||  ||||||||||||||||||||||    
T  50304490 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 50304442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 6e-62; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 19176701 - 19176837
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  19176701 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagttacgtgagta 19176800  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  19176801 ggccaaaacacgaggaccaaaagtgtaattaagccta 19176837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 33328292 - 33328157
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  33328292 tggagaataaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagta 33328193  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacct 136  Q
    ||||||||||||||||||||||||||||||||||||    
T  33328192 ggccaaaacacgaggaccaaaagtgtaattaaacct 33328157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 11656589 - 11656453
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  11656589 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgttcagttttaaaagggcatgaccagtttcgtgagta 11656490  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  11656489 ggccaaaacacgaggaccaaaagtgtaattaagccta 11656453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 41681267 - 41681132
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41681267 tggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 41681169  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  41681168 ggccaaaacacgaggaccaaaagtgtaattaagccta 41681132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 31133354 - 31133218
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||||||||    
T  31133354 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggactgttttgttttgttttaaaagggcgggaccagtttcgtgagta 31133255  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    || ||||||||||||||||||||||||||||| ||||    
T  31133254 gggcaaaacacgaggaccaaaagtgtaattaagccta 31133218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 9930068 - 9930199
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  9930068 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagta 9930167  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||| |||||||||||||||||||||||    
T  9930168 ggccaaaatacgaggaccaaaagtgtaattaa 9930199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 13225058 - 13225181
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13225058 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 13225157  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  13225158 cacgaggaccaaaagtgtaattaa 13225181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 12571998 - 12571861
Alignment:
Q  1 tggagaataaaatggggggt-aggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagt 99  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |  |||||||||||||||    
T  12571998 tggagaataaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggtagaaccagtttcgtgagt 12571899  T
Q  100 aggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  12571898 aggccaaaacacgaggaccaaaagtgtaattaagccta 12571861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13224774 - 13224645
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  13224774 tggagaataaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggattgttttgttctgttttaaaagggc-agaccagtttcgtgagta 13224676  T
Q  101 ggccaaaacacgaggaccaaaagtgtaatta 131  Q
    ||||||||||||| |||||||||||||||||    
T  13224675 ggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 9178049 - 9178177
Alignment:
Q  3 gagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtagg 102  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  9178049 gagaataaaatggggg-taagatgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaagagggcatgatcagtttcgtgagtagg 9178147  T
Q  103 ccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||    
T  9178148 ccaaaacacgaggaccaaaagtgtaattaa 9178177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 19176416 - 19176288
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  19176416 aaaataggaggtcggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaa 19176317  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  19176316 cacgaggaccaaaagtgtaattaagccta 19176288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 44831656 - 44831792
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||| |||||||||||||||||    
T  44831656 tggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataaccgttttgttctgttttaaaagagcaggaccagtttcgtgagta 44831755  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
     ||||||||||||||||||||||||| ||||| ||||    
T  44831756 tgccaaaacacgaggaccaaaagtgttattaagccta 44831792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 9929026 - 9928912
Alignment:
Q  18 ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggac 117  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  9929026 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggac 9928927  T
Q  118 caaaagtgtaattaa 132  Q
    |||||||||||||||    
T  9928926 caaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 12572270 - 12572396
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||||    
T  12572270 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagagcatgactagtttcgtgagtagaccaaaa 12572369  T
Q  109 cacgaggaccaaaagtgtaattaaacc 135  Q
    |||||||||||||||||||||||||||    
T  12572370 cacgaggaccaaaagtgtaattaaacc 12572396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 41681562 - 41681676
Alignment:
Q  18 ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggac 117  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||    
T  41681562 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggac 41681661  T
Q  118 caaaagtgtaattaa 132  Q
    |||||||||||||||    
T  41681662 caaaagtgtaattaa 41681676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 34540967 - 34541095
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  34540967 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaa 34541066  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  34541067 cacgaggaccaaaagtgtaattaagccta 34541095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 11656876 - 11656999
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |  |||||||||||||||||||||||||    
T  11656876 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggccgggaccagtttcgtgagtaggccaaaa 11656975  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  11656976 cacgaggaccaaaagtgtaattaa 11656999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 31133639 - 31133762
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  31133639 aaaataggaggtatgacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaa 31133738  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  31133739 cacgaggaccaaaagtgtaattaa 31133762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 44831373 - 44831250
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  44831373 aaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 44831274  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    || |||||||||||||||||||||    
T  44831273 catgaggaccaaaagtgtaattaa 44831250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 33743047 - 33742920
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  33743047 aaaataggaggtaggacgaaaaatgcatcaaaaatgataattgaaagaccgttt-gttctgttttaaaagggcaagaccagtttcgtgagtaggtcaaaa 33742949  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  33742948 cacgaggaccaaaagtgtaattaagccta 33742920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 33328559 - 33328682
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||| ||||    
T  33328559 aaaatgggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagagcatgactagtttcgtgagtaggctaaaa 33328658  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||||| |||||||    
T  33328659 cacgaggaccaaaagtctaattaa 33328682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 10918260 - 10918124
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| ||||||||||||||| || |||||||||||||||||||||| |||||||||  ||||| ||||||||||   |||||||||| |||||||||||    
T  10918260 tggaggataaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtgagta 10918161  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |  |||||||||||||| |||| ||||||||||||||    
T  10918160 gatcaaaacacgaggacaaaaaatgtaattaaaccta 10918124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 11336959 - 11337070
Alignment:
Q  27 aaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgt 126  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||  ||||| ||||||||||| |||||||||||| ||||||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  127 aattaaacctac 138  Q
    |||||| |||||    
T  11337059 aattaagcctac 11337070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 4629923 - 4629794
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||| |||||||||||||| |||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||||||| || |||||||    
T  4629923 aaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagggcaggaccagtttcgtgaatatgccaaaa 4629824  T
Q  109 cacgaggaccaaaagtgtaattaaacctac 138  Q
    |||||| |  ||||||| |||||| |||||    
T  4629823 cacgagaattaaaagtgcaattaagcctac 4629794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 4630203 - 4630330
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||      |||||||||||| | |||||||||||||  ||| ||||| |||||||||||    
T  4630203 tggagaataaaatggggggtaggatgaaaaatgcaacaataat------tgaaggaccgttgtattctgttttaaaaatgcaggaccaatttcgtgagta 4630296  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaac 134  Q
    | ||||||||||| || |||||||||||||||||    
T  4630297 gcccaaaacacgatgatcaaaagtgtaattaaac 4630330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 33743330 - 33743411
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggca 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||| ||||    
T  33743330 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgttttgttctgttttaaaaaggca 33743411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 8073970 - 8074085
Alignment:
Q  8 taaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaa 107  Q
    ||||||||||| |  |||| |||||||||||||| ||||| ||||||||   |||||||||||||||||||| || || || |||||||| |||||||||    
T  8073970 taaaatgggggttttgacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttcgtgaataggccaaa 8074068  T
Q  108 acacgaggaccaaaagt 124  Q
    |||||||||||||||||    
T  8074069 acacgaggaccaaaagt 8074085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 43958319 - 43958264
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaagga 56  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||    
T  43958319 tggagaataaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaagga 43958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 24569625 - 24569662
Alignment:
Q  185 tggtcaacttttccaaacgttgcattataaactttatt 222  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24569625 tggtcaacttttccaaacgttgcattataaactttatt 24569662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 9177700 - 9177665
Alignment:
Q  102 gccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||||||||||||||||||||||||| ||||    
T  9177700 gccaaaacacgaggaccaaaagtgtaattaagccta 9177665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 28877385 - 28877436
Alignment:
Q  85 accagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacct 136  Q
    |||| |||||||||| || |||||  ||||||||||||||||||||||||||    
T  28877385 accattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaacct 28877436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 10919691 - 10919728
Alignment:
Q  95 tgagtaggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  10919691 tgagtaggtcaaaacacgaggaccaaaagtataattaa 10919728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 35427308 - 35427360
Alignment:
Q  85 accagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||| |||||||||| || |||||  |||||||||||||||||||||| ||||    
T  35427308 accattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagccta 35427360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 6e-62; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 2319806 - 2319670
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2319806 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagta 2319707  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  2319706 ggccaaaacacgaggaccaaaaatgtaattaagccta 2319670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 20741234 - 20741098
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  20741234 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagta 20741135  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  20741134 ggccaaaacacgaggaccaaaagtgtaattaagccta 20741098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 10900341 - 10900472
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10900341 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagta 10900440  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||| |||||||||||||||||||||||    
T  10900441 ggccaaaatacgaggaccaaaagtgtaattaa 10900472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 18257271 - 18257135
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18257271 tggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 18257172  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
     ||||||||||||||||||||||||||||||| ||||    
T  18257171 tgccaaaacacgaggaccaaaagtgtaattaagccta 18257135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 11276993 - 11277124
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  11276993 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 11277092  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
     |||||||||||||||||||||||||||||||    
T  11277093 agccaaaacacgaggaccaaaagtgtaattaa 11277124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 15828052 - 15828183
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||||||||||    
T  15828052 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagggtatgaccagtttcgtgagta 15828151  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  15828152 ggccaaaacacgaggaccaaaagtgtaattaa 15828183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 31470727 - 31470858
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  31470727 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcagaaccagtttcgtgagta 31470826  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||| ||||||| ||||||||||||||||||||    
T  31470827 ggctaaaacacaaggaccaaaagtgtaattaa 31470858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 2322629 - 2322762
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  2322629 tggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaagactagtttcgtgagta 2322728  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaac 134  Q
    | ||||||||||| ||||||||||||||||||||    
T  2322729 gaccaaaacacgaagaccaaaagtgtaattaaac 2322762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 12935283 - 12935155
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12935283 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaa 12935184  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  12935183 cacgaggaccaaaagtgtaattaagccta 12935155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 12935568 - 12935704
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| || |||| |||||||||||||||||    
T  12935568 tggagaataaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgttttgttctgttttataaaggcaggaccagtttcgtgagta 12935667  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
     ||||||||||||||||||||||||||||||| ||||    
T  12935668 cgccaaaacacgaggaccaaaagtgtaattaagccta 12935704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 1149843 - 1149974
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||| |||||||||| ||||||    
T  1149843 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgttctattttaaaagggcatgaccagtttcatgagta 1149942  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||| ||||||||||||||||||||||||||||    
T  1149943 ggctaaaacacgaggaccaaaagtgtaattaa 1149974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 133
Target Start/End: Complemental strand, 10900065 - 10899941
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10900065 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaa 10899966  T
Q  109 cacgaggaccaaaagtgtaattaaa 133  Q
    ||||| |||||||||||||||||||    
T  10899965 cacgatgaccaaaagtgtaattaaa 10899941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 11445406 - 11445534
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  11445406 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaa 11445505  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  11445506 cacgaggaccaaaagtgtaattaagccta 11445534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 22219772 - 22219900
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22219772 aaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaa 22219871  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  22219872 cacgaggaccaaaagtgtaattaagccta 22219900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 23075547 - 23075675
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23075547 aaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaa 23075646  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  23075647 cacgaggaccaaaagtgtaattaagccta 23075675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 18505330 - 18505461
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| || ||||||||||||||    
T  18505330 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttatgttttaaaagggcaggatcagtttcgtgagta 18505429  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    | |||||||||||||||||||||| |||||||    
T  18505430 gaccaaaacacgaggaccaaaagtataattaa 18505461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 11445119 - 11444985
Alignment:
Q  3 gagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtagg 102  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||| ||||| |||||| ||||||||||||    
T  11445119 gagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttattctgttttaaaggggcaggaccagcttcgtgagtagg 11445020  T
Q  103 ccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||| ||||    
T  11445019 ccaaaacacgaggaccaaaagtgtaattaagccta 11444985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 18505045 - 18504920
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  18505045 aaaataggaggtaggacgaaaaatgaaacaaaaatgataattgaagaaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaa 18504946  T
Q  109 cacgaggaccaaaagtgtaattaaac 134  Q
    ||||||||||||||||||||||||||    
T  18504945 cacgaggaccaaaagtgtaattaaac 18504920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 28472770 - 28472635
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||| |||| ||||| ||||||||||     
T  28472770 tggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgttttaaaatggcaggaccactttcgtgagtt 28472672  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  28472671 ggccaaaacacgaggaccaaaagtgtaattaagccta 28472635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 29859959 - 29859824
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||| |||| ||||| ||||||||||     
T  29859959 tggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgttttaaaatggcaggaccactttcgtgagtt 29859861  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  29859860 ggccaaaacacgaggaccaaaagtgtaattaagccta 29859824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 18257565 - 18257679
Alignment:
Q  18 ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggac 117  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  18257565 ggtaggacgaaaaatgtaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggac 18257664  T
Q  118 caaaagtgtaattaa 132  Q
    ||||||| |||||||    
T  18257665 caaaagtataattaa 18257679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 4811503 - 4811375
Alignment:
Q  4 agaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggc 103  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||||| |    
T  4811503 agaataaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctattttaaaagggcatgaccagtttcgtgagtagac 4811404  T
Q  104 caaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||| ||  |||||||||||||||||||    
T  4811403 caaaatactgggaccaaaagtgtaattaa 4811375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 31470441 - 31470318
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||| ||| ||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  31470441 aaaataggaggtaggacgaaaaatgcaacaaaaataataattgaatgactgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaa 31470342  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    |||||||| |||||||||||||||    
T  31470341 cacgaggatcaaaagtgtaattaa 31470318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 20741520 - 20741646
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaa---tgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggcca 105  Q
    ||||| || ||||||||||||||||||| |||||   ||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  20741520 aaaataggaggtaggacgaaaaatgcaaaaaaaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggcca 20741619  T
Q  106 aaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||| |||||||||||    
T  20741620 aaacacgaggaccaagagtgtaattaa 20741646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 3835137 - 3835272
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||| || ||||||  |||||||||||||||||  |||| ||||| |||||||||||    
T  3835137 tggaggataaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgagta 3835236  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacct 136  Q
    || ||||||||  |||||||||||||||||||||||    
T  3835237 ggtcaaaacacatggaccaaaagtgtaattaaacct 3835272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 29033560 - 29033437
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    |||||||||||||||| ||||  ||||||||||||||||  |||||||| |||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  29033560 aaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 29033461  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
     |||||||||||||||||||||||    
T  29033460 tacgaggaccaaaagtgtaattaa 29033437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 15827766 - 15827641
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgt--tttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaa 106  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||  |||||| |||||||||||| ||  |||||||||||||||| |||||    
T  15827766 aaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccgtaatttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaa 15827667  T
Q  107 aacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||    
T  15827666 aacacgaggaccaaaagtgtaattaa 15827641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 38 - 132
Target Start/End: Complemental strand, 23074096 - 23074002
Alignment:
Q  38 aaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23074096 aaaaatgataattgaaggaccgttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 23074002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 4811675 - 4811798
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||  ||| || ||||||| ||||||||||||||    
T  4811675 aaaataggaggtatgatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaa 4811774  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    |||||||| ||||||| |||||||    
T  4811775 cacgaggatcaaaagtataattaa 4811798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 29035056 - 29035179
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||||| |||| ||||||||||||||||||||||||||  | ||||||  |||||||||||||||||||||||  |||| |||||||||||||| ||||    
T  29035056 aaaatggagggtgggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaatttcgtgagtaggctaaaa 29035155  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||| ||||||||||||||    
T  29035156 cacgaggacgaaaagtgtaattaa 29035179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 49 - 137
Target Start/End: Complemental strand, 1149551 - 1149463
Alignment:
Q  49 ttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  1149551 ttgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 1149463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 18296278 - 18296143
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||| | || ||| |||||||    
T  18296278 tggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaattttgtgagta 18296180  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
     | |||||||||||||| |||| | ||||||| ||||    
T  18296179 agtcaaaacacgaggactaaaattataattaagccta 18296143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 11276716 - 11276593
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||| ||||||||||| | |||||||||| ||||||||||||||||||||| | || ||||||| ||||||| ||||||    
T  11276716 aaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggaccattttgttctgttttaaaagggtaggatcagtttcatgagtagaccaaaa 11276617  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    |||| |||| ||| ||||||||||    
T  11276616 cacgcggactaaacgtgtaattaa 11276593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 22534214 - 22534267
Alignment:
Q  79 ggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||| ||||| |||||||||| || ||||| |||||||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaa 22534267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23074122 - 23074090
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatg 33  Q
    |||||||||||||||||||||||||||||||||    
T  23074122 tggagaataaaatggggggtaggacgaaaaatg 23074090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 35163309 - 35163182
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||| |||| ||||| ||| |||||| || | |||| |||||||||  ||| |||  | |||||||| ||| |||||  || |||||    
T  35163309 aaaataggaggtaggactaaaactgcaaaaaacatgatagttta-ggacggttttgttcgatttgaaagagacaagaccatttttgtgagctggtcaaaa 35163211  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
      ||||||| |||||||||||||||||||    
T  35163210 tgcgaggactaaaagtgtaattaaaccta 35163182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 6e-62; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 5137114 - 5136978
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||     
T  5137114 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtt 5137015  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||||||||    
T  5137014 ggccaaaacacgaggaccaaaagtgtaattaaaccta 5136978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 31779063 - 31779199
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31779063 tggagaataaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 31779162  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  31779163 ggccaaaacacgaggaccaaaagtgtaattaagccta 31779199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 41046834 - 41046700
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | ||    
T  41046834 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtaatta 41046735  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacc 135  Q
    |||||||||||||||||||||||||||||||||||    
T  41046734 ggccaaaacacgaggaccaaaagtgtaattaaacc 41046700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 20840693 - 20840558
Alignment:
Q  2 ggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtag 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  20840693 ggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaaaggcaggaccagtttcgtgagtag 20840594  T
Q  102 gccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||||||||||||||||||||||||| ||||    
T  20840593 gccaaaacacgaggaccaaaagtgtaattaagccta 20840558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 39555988 - 39556119
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  39555988 tggagaataaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagta 39556087  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  39556088 ggccaaaacacgaggaccaaaagtgtaattaa 39556119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 24300967 - 24301103
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||| ||||| |||||||||||    
T  24300967 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggaccgttttgttttgttttaaaatggcaggaccaatttcgtgagta 24301066  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  24301067 ggccaaaacacgaggaccaaaagtgtaattaagccta 24301103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 48453123 - 48452995
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  48453123 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgtgagta 48453024  T
Q  101 ggccaaaacacgaggaccaaaagtgtaat 129  Q
    ||||||||||||| |||||||||||||||    
T  48453023 ggccaaaacacgatgaccaaaagtgtaat 48452995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 23644596 - 23644465
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| ||||| |||||||||||    
T  23644596 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaatggcaggaccaatttcgtgagta 23644497  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||| |||||||||||||||||||||||    
T  23644496 ggccaaaatacgaggaccaaaagtgtaattaa 23644465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 43973575 - 43973444
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  | || |||||||||||    
T  43973575 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcataatcattttcgtgagta 43973476  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    || |||||||||||||||||||||||||||||    
T  43973475 ggacaaaacacgaggaccaaaagtgtaattaa 43973444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 22425224 - 22425354
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||| |||||| ||||||||||    
T  22425224 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtaccgttttgttctgttttacaagggcatgaccagattcgtgagta 22425323  T
Q  101 ggccaaaacacgaggaccaaaagtgtaatta 131  Q
    |||| ||||||||||||||||||||||||||    
T  22425324 ggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 25853638 - 25853769
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| | ||||||||||||||||||||    
T  25853638 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaatgacaagaccagtttcgtgagta 25853737  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |  ||||||||||||| |||||||||||||||    
T  25853738 gagcaaaacacgaggatcaaaagtgtaattaa 25853769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 37727063 - 37726932
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||  ||||||||||| || |    
T  37727063 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcagaaccagtttcgtaagca 37726964  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    | ||||||||||||||||||||||||||||||    
T  37726963 gaccaaaacacgaggaccaaaagtgtaattaa 37726932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 4275783 - 4275911
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  4275783 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagagcatgaccagtttcgtgagtaggccaaaa 4275882  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  4275883 cacgaggaccaaaagtgtaattaagccta 4275911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 17464617 - 17464489
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||    
T  17464617 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgcgaataggccaaaa 17464518  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  17464517 cacgaggaccaaaagtgtaattaagccta 17464489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 26837767 - 26837902
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||  ||||||||||| ||||    
T  26837767 tggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgaccgttttgttctatttt-aaagggcagaaccagtttcgtaagta 26837865  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  26837866 ggccaaaacacgaggaccaaaagtgtaattaagccta 26837902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 32535370 - 32535505
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaat-----gatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgt 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||     |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  32535370 tggagaataaaatggggg-taggacgaaaaatgcaacaaaaatttaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgt 32535468  T
Q  96 gagtaggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||||||||||||||||||||||||||    
T  32535469 gagtaggccaaaacacgaggaccaaaagtgtaattaa 32535505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 43973859 - 43973987
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  43973859 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcagaaccagtttcgtgagtaggccaaaa 43973958  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  43973959 cacgaggaccaaaagtgtaattaagccta 43973987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 20840980 - 20841103
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  20840980 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaa 20841079  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    |||||| |||||||||||||||||    
T  20841080 cacgagcaccaaaagtgtaattaa 20841103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 27393787 - 27393664
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| |||||    
T  27393787 aaaatagggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagttttgtgagtaggtcaaaa 27393688  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  27393687 cacgaggaccaaaagtgtaattaa 27393664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 30098182 - 30098305
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||    
T  30098182 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaa 30098281  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  30098282 cacgaggaccaaaagtgtaattaa 30098305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 32535085 - 32534958
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||| ||||||||||| |||||||    
T  32535085 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaa 32534986  T
Q  109 cacgaggaccaaaagtgtaattaaacct 136  Q
    ||||||||||||||||||||||||||||    
T  32534985 cacgaggaccaaaagtgtaattaaacct 32534958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 37727349 - 37727472
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  37727349 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaa 37727448  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    || |||||||||||||||||||||    
T  37727449 catgaggaccaaaagtgtaattaa 37727472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25612388 - 25612522
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| || || ||| |||||||||| ||||||||||||| ||||| |||||||||||    
T  25612388 tggaggataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttcgtgagta 25612487  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacc 135  Q
    || ||||||||||||||||||||||||||||||||    
T  25612488 ggtcaaaacacgaggaccaaaagtgtaattaaacc 25612522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 29801477 - 29801359
Alignment:
Q  14 ggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacga 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  29801477 ggggggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacga 29801378  T
Q  114 ggaccaaaagtgtaattaa 132  Q
     ||||||||||||||||||    
T  29801377 tgaccaaaagtgtaattaa 29801359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 25853360 - 25853237
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  25853360 aaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcatgaccaatttcgtgagtaggccaaaa 25853261  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  25853260 cacgaggaccaaaagtgtaattaa 25853237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 27393988 - 27394119
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||| |||||||||| | |||||||||||||||||||| |||||||| |||||||||||||||||||| |||| ||||  |||||||||||    
T  27393988 tggagaataaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatcgttttgttctgttttaaaaaggcaggacctatttcgtgagta 27394087  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  27394088 ggccaaaacacgaggaccaaaagtgtaattaa 27394119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 39555704 - 39555581
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||    
T  39555704 aaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaa 39555605  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  39555604 cacgaggaccaaaagtgtaattaa 39555581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 17464902 - 17465034
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaa-atgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagt 99  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||  ||||||||||| || ||    
T  17464902 tggagaataaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggtcagaccagtttcatgcgt 17465001  T
Q  100 aggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||| |||||||||    
T  17465002 aggccaaaacacgaggaccaaaaatgtaattaa 17465034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 29801835 - 29801963
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29801835 aaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaa 29801934  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
     ||||||| ||||||||||||||| ||||    
T  29801935 tacgaggatcaaaagtgtaattaagccta 29801963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 30104610 - 30104480
Alignment:
Q  6 aataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggcca 105  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || ||||||||||||||| ||||| ||||||||||||| ||    
T  30104610 aataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttctattttgttttaaaagggcaggaccaatttcgtgagtaggtca 30104512  T
Q  106 aaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||||||||||||||||||||| ||||    
T  30104511 aaacacgaggaccaaaagtgtaattaagccta 30104480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 31778779 - 31778656
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  31778779 aaaataggaggtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtagaccaaaa 31778680  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  31778679 cacgaggaccaaaagtgtaattaa 31778656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 26274978 - 26275113
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||||||||||| | |||||||||||||||||    
T  26274978 tggagaataaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggaccgttttattctgttttaaaagggtaggaccagtttcgtgagta 26275076  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    || |||||||| ||| |||||| | ||||||||||||    
T  26275077 ggtcaaaacacaagggccaaaattataattaaaccta 26275113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 23644884 - 23645007
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| |||||||||||||||||||    
T  23644884 aaaataggaggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggtaggaccaatttcgtgagtaggccaaaa 23644983  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||||| |||||||    
T  23644984 cacgaggaccaaaagtataattaa 23645007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 26274693 - 26274566
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  26274693 aaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagtccaaaa 26274594  T
Q  109 cacgaggaccaaaagtgtaattaaacct 136  Q
     || |||| ||||| |||||||||||||    
T  26274593 tacaaggatcaaaaatgtaattaaacct 26274566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 5137411 - 5137528
Alignment:
Q  20 taggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacca 119  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  5137411 taggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctattttaaaagggcagaaccagtttcatgagtaggccaaaacacgaggacca 5137510  T
Q  120 aaagtgtaattaaaccta 137  Q
    ||||||||||||| ||||    
T  5137511 aaagtgtaattaagccta 5137528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 22424940 - 22424812
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||  |||    
T  22424940 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggacagaaccagtttcgtaagtaggcttaaa 22424841  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||| ||||||||||||||||| ||||    
T  22424840 cacgagaaccaaaagtgtaattaagccta 22424812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 26837486 - 26837358
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||| ||| |||| |||||||||| ||||| |||||||||||||||||||    
T  26837486 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttcgttatgttataaaagggcaggaccaatttcgtgagtaggccaaaa 26837387  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
     || |||||||||| ||||||||||||||    
T  26837386 tacaaggaccaaaaatgtaattaaaccta 26837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 23228419 - 23228549
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||| |||||||||  |||||||| |||||||||||||| || || |||||||||||    
T  23228419 tggaggataaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgtgagta 23228517  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||| |||||||||||||||||||    
T  23228518 ggccaaaacacggggaccaaaagtgtaattaa 23228549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 50116828 - 50116951
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    |||||||||||||||||||||| ||||||||||||||||  |||| |||||||||||||| ||| ||||||||| ||||| ||||||||||| | |||||    
T  50116828 aaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaatttcgtgagtaagtcaaaa 50116927  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    |||||||| |||||||||||||||    
T  50116928 cacgaggatcaaaagtgtaattaa 50116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 51474753 - 51474881
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| |||||||||||||||||||||||||||||||||  | ||||||  ||||||| ||||||||||||||| ||||| ||||||||||| |||||||    
T  51474753 aaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaatttcgtgagtatgccaaaa 51474852  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||| | ||||||||||||||||| ||||    
T  51474853 cacgggaaccaaaagtgtaattaagccta 51474881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 32697112 - 32697242
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||  ||| | |||||||||||    
T  32697112 tggaggataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcgtgagta 32697210  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||| |||||||||||||||||| | |||||||    
T  32697211 ggctaaaacacgaggaccaaaaatataattaa 32697242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 24300682 - 24300556
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||| ||||||||| |||||||||||||||| |||||| |||||||| ||||||||||||||| || |||||||||||||| || |||||||    
T  24300682 aaaataggaggtgggacgaaaattgcaacaaaaatgataattgaagaaccgttttattctgttttaaaaggacaggaccagtttcgtgaataagccaaaa 24300583  T
Q  109 cacgaggaccaaaagtgtaattaaacct 136  Q
    ||||| |||||||| |||||||||||||    
T  24300582 cacga-gaccaaaaatgtaattaaacct 24300556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 41047118 - 41047243
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||| ||  ||||||||||||||||||||||||    
T  41047118 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga-cgttttattctgttttaaaaggacagaaccagtttcgtgagtaggccaaaa 41047216  T
Q  109 cacgaggaccaaaagtgtaattaaacct 136  Q
    || || || | |||||||||||||||||    
T  41047217 catgaaga-cgaaagtgtaattaaacct 41047243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 37220691 - 37220555
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||||  ||||||||  |||| |||||||||||||| ||| || |  | | |||||||    
T  37220691 tggaggataaaatggagggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatattgtgagta 37220592  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  37220591 ggccaaaatacgaggaccaaaagtgtaattaagccta 37220555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 51473542 - 51473431
Alignment:
Q  21 aggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaa 120  Q
    ||||| |||| ||||||||||||||||   |||||||  ||||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaa 51473443  T
Q  121 aagtgtaattaa 132  Q
    ||||||||||||    
T  51473442 aagtgtaattaa 51473431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 25420558 - 25420683
Alignment:
Q  7 ataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaa 106  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||||||||  |||| |||| ||||||||||||  || || ||||||||||||| |||    
T  25420558 ataaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaatttcgtgagtaggtcaa 25420657  T
Q  107 aacacgaggaccaaaagtgtaattaa 132  Q
    || |||| || |||||||||||||||    
T  25420658 aatacgatgatcaaaagtgtaattaa 25420683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 45966064 - 45965936
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    |||||||||| ||| ||||||||||||||| |||||||| | |||||||  ||||||| ||||||||||| ||| ||  |  |||||||||| |||||||    
T  45966064 aaaatgggggttagaacgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtgagtatgccaaaa 45965965  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  45965964 cacgaggaccaaaagtgtaattaagccta 45965936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 37222030 - 37222118
Alignment:
Q  49 ttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||  ||||||||||||||||||| |||| ||||| ||| ||||||||| ||||||||||||||||||||||||||||| ||||    
T  37222030 ttgaaggatggttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagccta 37222118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 18010162 - 18010271
Alignment:
Q  7 ataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaa 106  Q
    ||||||||| ||| ||||||||||||||||||||||||||| |||||  ||  ||||||||||||||||||||||   |||| |||||||||||| | ||    
T  18010162 ataaaatggagggcaggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtagacgaa 18010261  T
Q  107 aacacgagga 116  Q
    |||| |||||    
T  18010262 aacaggagga 18010271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 25419273 - 25419150
Alignment:
Q  8 taaaatggggggtaggacgaaaaatgcaacaaaaa-tgatacttgaa-ggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggcca 105  Q
    |||||||||||  ||||| |||| ||||| ||||| ||||| ||||| |||| ||||||||||||||||||||||||  || | ||||||||||| || |    
T  25419273 taaaatgggggtaaggactaaaactgcaaaaaaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatttcgtgagtaagcta 25419174  T
Q  106 aaacacgaggaccaaaagtgtaat 129  Q
    |||||||| |||||||||| ||||    
T  25419173 aaacacgaagaccaaaagtataat 25419150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 32695830 - 32695704
Alignment:
Q  8 taaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaa 107  Q
    ||||||| |||  ||||| |||| |||||||||||| ||| | | |||||  |||||||||||||||||| | ||  | || |||||| |||||||||||    
T  32695830 taaaatgagggtaaggactaaaattgcaacaaaaataataatcgtaggacaattttgttctgttttaaaaagacataatcaatttcgtaagtaggccaaa 32695731  T
Q  108 acacgaggaccaaaagtgtaattaaac 134  Q
    | | ||||||||||| |||||||||||    
T  32695730 atatgaggaccaaaaatgtaattaaac 32695704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23227390 - 23227319
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttt 72  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||| | ||| |||||   ||||||||||||    
T  23227390 tggaggataaaatggggagaaggacgaaaaatgcaacaaaaatgaaaattggaggacaaatttgttctgttt 23227319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 49407877 - 49407794
Alignment:
Q  54 ggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||| |||||||||| ||| |||  |||| ||||| |||||||||  || |||||  |||||||||||||||||||||| ||||    
T  49407877 ggacggttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagccta 49407794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 22370647 - 22370598
Alignment:
Q  84 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaa 133  Q
    ||||| |||||||||| || |||||  |||||||||||||||||||||||    
T  22370647 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 22370598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 40838703 - 40838650
Alignment:
Q  84 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||| |||||||||| || |||||  |||||| ||||||||||||||||||||    
T  40838703 gaccattttcgtgagttggtcaaaatgcgaggatcaaaagtgtaattaaaccta 40838650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 52375826 - 52375879
Alignment:
Q  84 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||| |||||||||| || |||||  |||||||||||||||||||||| ||||    
T  52375826 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagccta 52375879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 6e-59; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 46193816 - 46193947
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  46193816 tggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagta 46193915  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  46193916 ggccaaaacacgaggaccaaaagtgtaattaa 46193947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 25447647 - 25447783
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  25447647 tggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 25447746  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  25447747 ggccaaaacacgaagaccaaaagtgtaattaagccta 25447783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 11153558 - 11153689
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||| |||||||||||||||||    
T  11153558 tggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaacgttttgttctgttttaaaatggcaggaccagtttcgtgagta 11153657  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  11153658 ggccaaaacacgaggaccaaaagtgtaattaa 11153689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 15523645 - 15523776
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  15523645 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttttgttttaaaagggcaggaccagtttcgtgagta 15523744  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    | ||||||||||| ||||||||||||||||||    
T  15523745 gcccaaaacacgatgaccaaaagtgtaattaa 15523776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 33109818 - 33109687
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  33109818 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagagcaggaccagtttcgtgagta 33109719  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
     ||||||||||||||||||||| |||||||||    
T  33109718 tgccaaaacacgaggaccaaaaatgtaattaa 33109687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 54995481 - 54995615
Alignment:
Q  3 gagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtagg 102  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||    
T  54995481 gagaataaaatgggggttaggacgaaaaatgcaacaaaa-tgatacttgaaggaccgttttgttctattttaaaagggcatgatcagtttcgtgagtagg 54995579  T
Q  103 ccaaaacacgaggaccaaaagtgtaattaaacctac 138  Q
    ||||||||||||||||||||||||||||||||||||    
T  54995580 ccaaaacacgaggaccaaaagtgtaattaaacctac 54995615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 12234463 - 12234327
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||| ||    
T  12234463 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaata 12234364  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
     ||||||||| ||||||||||||||||||||| ||||    
T  12234363 agccaaaacaagaggaccaaaagtgtaattaagccta 12234327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 23494577 - 23494446
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  23494577 tggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgctttgttctgttttaaaagggcaggactagtttcgtgagta 23494478  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||||||||||| |||||||||    
T  23494477 ggccaaaacacgaggaccaaaaatgtaattaa 23494446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 23494872 - 23494990
Alignment:
Q  19 gtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacc 118  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23494872 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 23494971  T
Q  119 aaaagtgtaattaaaccta 137  Q
    |||||||||||||| ||||    
T  23494972 aaaagtgtaattaagccta 23494990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 25937804 - 25937668
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25937804 tggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 25937705  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||| |||||||||||||||||| ||||||||| ||||    
T  25937704 ggctaaaacacgaggaccaaaaatgtaattaagccta 25937668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 38962233 - 38962361
Alignment:
Q  4 agaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||| ||| |    
T  38962233 agaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagac 38962332  T
Q  104 caaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||| |||||||||    
T  38962333 caaaacacgaggaccaaaaatgtaattaa 38962361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 4219691 - 4219560
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||| |||| |||||||||||||||||    
T  4219691 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttttattttaaaatggcaggaccagtttcgtgagta 4219592  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||||||||||| |||||||||    
T  4219591 ggccaaaacacgaggaccaaaaatgtaattaa 4219560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 25447373 - 25447250
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  25447373 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaa 25447274  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  25447273 cacgaggaccaaaagtgtaattaa 25447250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 45082843 - 45082966
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  45082843 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgtgagtaagccaaaa 45082942  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  45082943 cacgaggaccaaaagtgtaattaa 45082966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 48526600 - 48526727
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48526600 aaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtagaccaaaa 48526699  T
Q  109 cacgaggaccaaaagtgtaattaaacct 136  Q
    |||||||||||||||| |||||||||||    
T  48526700 cacgaggaccaaaagtataattaaacct 48526727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 15523361 - 15523233
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15523361 aaaataggaggtaggacgaaaaatgcaaaaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaa 15523262  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  15523261 cacgaggaccaaaagtgtaattaagccta 15523233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 22434589 - 22434723
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||| |||| |||||||||||||||||    
T  22434589 tggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttt-aaaatggcaggaccagtttcgtgagta 22434686  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||| ||||||||||||||    
T  22434687 ggccaaaacacgaggaccaaaaatgtaattaaaccta 22434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 54995195 - 54995067
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||| |    
T  54995195 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggactagtttcgtgagtaggccaata 54995096  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||    
T  54995095 cacgaggaccaaaagtgtaattaaaccta 54995067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 12234748 - 12234871
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  12234748 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaa 12234847  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||||| |||||||    
T  12234848 cacgaggaccaaaagtataattaa 12234871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 18751725 - 18751598
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  18751725 aaaataggaggtgggacgaaaaatgcaacaaaaatgatatttgaaggaccgttttgttctgttttaaaagggcatgaccagttttatgagtaggccaaaa 18751626  T
Q  109 cacgaggaccaaaagtgtaattaaacct 136  Q
    ||||||||||||||||||||||||||||    
T  18751625 cacgaggaccaaaagtgtaattaaacct 18751598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 22434305 - 22434182
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  22434305 aaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaa 22434206  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  22434205 cacgaggaccaaaagtgtaattaa 22434182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 46193531 - 46193408
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  46193531 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacctttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 46193432  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  46193431 cacgaggaccaaaagtgtaattaa 46193408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 4219978 - 4220106
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| ||| || ||||||||||||||||||||||    
T  4219978 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgttttaaaagagcaggatcagtttcgtgagtaggccaaaa 4220077  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||    
T  4220078 cacgaggaccaaaagtgtaattaaaccta 4220106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 20470930 - 20471058
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  20470930 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggaatgaccagtttcgtaagtaggccaaaa 20471029  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  20471030 cacgaggaccaaaagtgtaattaagccta 20471058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 45082564 - 45082430
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  45082564 tggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctattttaaaagggcaaaaccag-ttcgtgagta 45082467  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    | ||||||||||| ||||||||| |||||||||||||    
T  45082466 gaccaaaacacgatgaccaaaagcgtaattaaaccta 45082430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 18763951 - 18764062
Alignment:
Q  21 aggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaa 120  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  121 aagtgtaattaa 132  Q
    ||||||||||||    
T  18764051 aagtgtaattaa 18764062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 48526329 - 48526199
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||   |||||||| ||||||    
T  48526329 tggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcagagccagtttcatgagta 48526231  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    || ||||||||||| |||||||||||||||||    
T  48526230 ggtcaaaacacgagaaccaaaagtgtaattaa 48526199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 51020928 - 51020795
Alignment:
Q  4 agaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggc 103  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| |||| |  ||    
T  51020928 agaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgttttaaaagggcaggaccagtttagtgaattagc 51020829  T
Q  104 caaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||||||| ||||| ||||||||||||||| ||||    
T  51020828 caaaacatgaggatcaaaagtgtaattaagccta 51020795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 33109883 - 33110011
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||| ||||||||| |||||||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    || ||||||||||||||||||||| ||||    
T  33109983 catgaggaccaaaagtgtaattaagccta 33110011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 2118707 - 2118841
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||  | |||||||||| |||| |    
T  2118707 tggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttatgttttaaaaggataggaccagtttcatgagca 2118805  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacct 136  Q
    ||||||||||||| ||||||||||||||||||||||    
T  2118806 ggccaaaacacgaagaccaaaagtgtaattaaacct 2118841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 22170348 - 22170478
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||| |||| || || |||||| ||||    
T  22170348 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttgttttaaaaaggcagga-caatttcgtcagta 22170446  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    || |||||||||||||||||||||||||||||    
T  22170447 ggtcaaaacacgaggaccaaaagtgtaattaa 22170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 25938090 - 25938213
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  25938090 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 25938189  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||| ||||||||||||||||||||    
T  25938190 cacaaggaccaaaagtgtaattaa 25938213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 2118419 - 2118296
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||  ||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  2118419 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggactattttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 2118320  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||| ||||||||||||||||||||    
T  2118319 cacaaggaccaaaagtgtaattaa 2118296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 11153272 - 11153149
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||| ||| |||||||||||||||    
T  11153272 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctattttaaaagggcatgaccaattttgtgagtaggccaaaa 11153173  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||||| |||||||    
T  11153172 cacgaggaccaaaagtataattaa 11153149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 51021215 - 51021342
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||| ||||| || ||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  51021215 aaaataggaggtaggacgaaaaatgcaacaaaa-tgataattaaaggaccgttttgttgtgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 51021313  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||| ||||||||||||||| ||||    
T  51021314 cacgaggatcaaaagtgtaattaagccta 51021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 48713757 - 48713893
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| ||||| |||| ||||||    
T  48713757 tggaggataaaatggaggggaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccattttcatgagta 48713856  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    ||| |||||||||| |  |||||||||||||||||||    
T  48713857 ggctaaaacacgagaattaaaagtgtaattaaaccta 48713893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 20958272 - 20958401
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||||| |||||||||   |||||||||||||||||||||| ||||| |||||||||||    
T  20958272 tggaggataaaatggggg-taggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccattttcgtgagta 20958369  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||| |||||||| ||||||||||||||    
T  20958370 ggccaaaatacgaggactaaaagtgtaattaa 20958401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 43243692 - 43243807
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| ||||| |||||||||||    
T  43243692 tggaggataaaatgggg-gtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttcgtgagta 43243790  T
Q  101 ggccaaaacacgaggac 117  Q
    |||||||||||||||||    
T  43243791 ggccaaaacacgaggac 43243807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 16691070 - 16690935
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||   ||||||| |||||||||  |||| ||||| |||||||||||    
T  16691070 tggaggataaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgagta 16690971  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacct 136  Q
    |  |||||||| |||||||||| |||||||||||||    
T  16690970 gatcaaaacacaaggaccaaaaatgtaattaaacct 16690935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 44892559 - 44892690
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| ||||||||| ||||||||||||||||||||||||||  ||| ||||| ||| ||||||||||||||||||| ||||  |||| |||||||||||    
T  44892559 tggaggataaaatggagggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttcgtgagta 44892658  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    || ||||||||||||||||||| | |||||||    
T  44892659 ggtcaaaacacgaggaccaaaaatataattaa 44892690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 43281208 - 43281317
Alignment:
Q  7 ataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaa 106  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||| ||  |||||||||||||||||| |||| ||||| |||||||||||||||||    
T  43281208 ataaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtgagtaggccaa 43281306  T
Q  107 aacacgaggac 117  Q
    |||||||||||    
T  43281307 aacacgaggac 43281317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 48293728 - 48293592
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||| ||| |||| |||||||||||||||||||||| |||||| ||  ||||||| |||||||||  | || || || |||||||||||    
T  48293728 tggagaataaaatggagggcaggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttcgtgagta 48293629  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
     ||||||||||||||||||||||||||||||| ||||    
T  48293628 agccaaaacacgaggaccaaaagtgtaattaagccta 48293592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 35363028 - 35363143
Alignment:
Q  18 ggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttt-aaaagggcaagaccagtttcgtgagtaggccaaaacacgagga 116  Q
    ||||| |||||||||||||||||||||||| ||||| |||||||||||| | |||| ||||| |||  ||||||||||||||||||||||||||||||||    
T  35363028 ggtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgagga 35363127  T
Q  117 ccaaaagtgtaattaa 132  Q
     |||||||||||||||    
T  35363128 tcaaaagtgtaattaa 35363143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 48294959 - 48295085
Alignment:
Q  7 ataaaatggggggtaggacg-aaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggcca 105  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| |||  ||||||| |||||||||  |||||||||| ||||||||||||  ||    
T  48294959 ataaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaatttcgtgagtagatca 48295058  T
Q  106 aaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||| |||||||| |||||||||    
T  48295059 aaacacgatgaccaaaaatgtaattaa 48295085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 20957321 - 20957196
Alignment:
Q  3 gagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtagg 102  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||| |||||||||  ||||||| ||||||||||| | | ||||| ||||||||||| |    
T  20957321 gagaataaaatggggagtatgacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtgagtaag 20957222  T
Q  103 ccaaaacacgaggaccaaaagtgtaa 128  Q
    ||||||| |||||||||||| |||||    
T  20957221 ccaaaactcgaggaccaaaaatgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 48708429 - 48708293
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| |||||||| | |||||||  | ||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| || || |||||||  ||    
T  48708429 tggaggataaaatgagtggtaggattataaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggtta 48708330  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||  ||||||||||||||||||| ||||    
T  48708329 ggccaaaacacatggaccaaaagtgtaattaagccta 48708293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 12503562 - 12503453
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||| |||  || |||||||||||||| | |||||    
T  12503562 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaa 12503463  T
Q  109 cacgaggacc 118  Q
    ||||||||||    
T  12503462 cacgaggacc 12503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 44890645 - 44890520
Alignment:
Q  7 ataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaa 106  Q
    ||||||||||||||| || |||||||||||||||||  ||| || |||||   ||||||||||||||||||||||| ||||| |||||||| |||| |||    
T  44890645 ataaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttcgtgaataggtcaa 44890546  T
Q  107 aacacgaggaccaaaagtgtaattaa 132  Q
    ||||| |||||||||| |||||||||    
T  44890545 aacacaaggaccaaaattgtaattaa 44890520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 10258306 - 10258429
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| ||||||| ||| |||| |||||||||||||||| |||||  ||  ||||  ||||||||||||||||| ||||| |||| ||||||||||| ||    
T  10258306 aaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccacaa 10258405  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  10258406 cacgaggaccaaaagtgtaattaa 10258429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12503847 - 12503913
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttc 67  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12503847 tggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttc 12503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 16318251 - 16318318
Alignment:
Q  65 ttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 16318318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 16691483 - 16691613
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| |||||||||| |||| ||||||||||||||||||||| ||| || ||||||  ||||||| || ||||||  |||| ||||| |||||||||||    
T  16691483 tggaggataaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttatg-tttaaagaggcaggaccattttcgtgagta 16691581  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    || ||||||||  ||| |||||||||||||||    
T  16691582 ggtcaaaacacagggatcaaaagtgtaattaa 16691613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 43242398 - 43242328
Alignment:
Q  7 ataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaa 77  Q
    ||||||| || ||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  43242398 ataaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44220788 - 44220861
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgtttta 74  Q
    ||||| |||||||  ||||||| |||||||||| |||||||||||||  ||||||||  |||||||||||||||    
T  44220788 tggaggataaaattaggggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgttctgtttta 44220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 55189636 - 55189531
Alignment:
Q  27 aaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgt 126  Q
    ||||||| | ||||||||||| ||||| |||  ||||||||| |||||||||||||  |||| |||  ||| |||| ||||||||||||| ||||| | |    
T  55189636 aaaaatgtagcaaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatat 55189537  T
Q  127 aattaa 132  Q
    ||||||    
T  55189536 aattaa 55189531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 229254 - 229159
Alignment:
Q  42 atgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||| || ||||||  ||||||||  ||| |||  |||||||||| ||||| |||  || ||||| ||||||||||||||||||||||||||||    
T  229254 atgatagtttaaggacgattttgttcaatttgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaaaccta 229159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 30597939 - 30598059
Alignment:
Q  8 taaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaaga-ccagtttcgtgagtaggccaa 106  Q
    |||||| |||| |||||| |||| |||||||||||| ||| || | ||||  |||||||| | |||||||| |  ||| ||| || ||||||| || |||    
T  30597939 taaaataggggttaggaccaaaagtgcaacaaaaat-ataatttagggacgattttgttc-gatttaaaagagacagaaccaattccgtgagttggtcaa 30598036  T
Q  107 aacacgaggaccaaaagtgtaat 129  Q
    |||||||||||||||||||||||    
T  30598037 aacacgaggaccaaaagtgtaat 30598059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 229649 - 229706
Alignment:
Q  79 ggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacct 136  Q
    |||||||||| |||||||||  || |||||  ||| ||||||||||||||||||||||    
T  229649 ggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaaacct 229706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 44219426 - 44219378
Alignment:
Q  84 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||| |||||||||| ||  |||| |||||||||||||||||||||||    
T  44219426 gaccaatttcgtgagttggttaaaatacgaggaccaaaagtgtaattaa 44219378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 55677453 - 55677501
Alignment:
Q  84 gaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||| |||||||||| || ||||| || ||||||||||||||||||||    
T  55677453 gaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaa 55677501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 114; Significance: 9e-58; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 4618 - 4755
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4618 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagta 4717  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaacctac 138  Q
     |||||||||||| |||||||||||||||||| |||||    
T  4718 tgccaaaacacgaagaccaaaagtgtaattaagcctac 4755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 4329 - 4242
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtg 96  Q
    ||||| || ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  4329 aaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 1801 - 1665
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||| |||||||||||||||||    
T  1801 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacattttgttctgttttaaaagggcaggaccagtttcgtgagta 1702  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  1701 ggccaaaacaggaggaccaaaagtgtaattaagccta 1665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 2086 - 2214
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  2086 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaa 2185  T
Q  109 cacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||| ||||    
T  2186 cacgaggaccaaaagtgtaattaagccta 2214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 134084 - 134220
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||| ||||||||||| ||| |||||||||||||    
T  134084 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatcgttttgttctgtattaaaagggcatgactagtttcgtgagta 134183  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||||||||||||||||||||||||||| ||||    
T  134184 ggccaaaacacgaggaccaaaagtgtaattaagccta 134220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 886 - 756
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  886 tggagaataaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtatcgtgagta 788  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||| ||||||||||||||||||    
T  787 ggccaaaacacgaagaccaaaagtgtaattaa 756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 1160 - 1283
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  1160 aaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaa 1259  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||| ||||||||||||||    
T  1260 cacgaggactaaaagtgtaattaa 1283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 10284 - 10414
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  10284 tggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggaaacaccagtttcgtgagta 10382  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    | ||||||||||||||||||||||||||||||    
T  10383 gaccaaaacacgaggaccaaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 10039 - 9934
Alignment:
Q  28 aaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 127  Q
    |||||| ||||||| ||||| |||||||||| ||||||||| | |||||||||||||| ||||||||||| ||||| |||||||||||||||||| ||||    
T  10039 aaaatgtaacaaaattgataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgta 9940  T
Q  128 attaaa 133  Q
    ||||||    
T  9939 attaaa 9934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 104; Significance: 8e-52; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 64436 - 64305
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || || ||||||||||||||    
T  64436 tggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaggtcaggatcagtttcgtgagta 64337  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
     | |||||||||||||||||||||||||||||    
T  64336 tgtcaaaacacgaggaccaaaagtgtaattaa 64305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 64735 - 64851
Alignment:
Q  20 taggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacca 119  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  64735 taggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacca 64834  T
Q  120 aaagtgtaattaaacct 136  Q
    |||||||||||||||||    
T  64835 aaagtgtaattaaacct 64851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10755 - 10640
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  10755 tggagaataaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagtttcatgagta 10656  T
Q  101 ggccaaaacacgagga 116  Q
    ||||||||||||||||    
T  10655 ggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 11042 - 11165
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||    
T  11042 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaa 11141  T
Q  109 cacgaggaccaaaagtgtaattaa 132  Q
    ||||||||||||||||||||||||    
T  11142 cacgaggaccaaaagtgtaattaa 11165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 18968 - 18841
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  18968 tggagaataaaatggggg-taggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgttatgttttaaaagggcaagaccagtttcgtgagta 18870  T
Q  101 ggccaaaacacgaggaccaaaagtgtaat 129  Q
    ||||||||||  |||||||||||||||||    
T  18869 ggccaaaacagaaggaccaaaagtgtaat 18841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 38 - 132
Target Start/End: Original strand, 19069 - 19163
Alignment:
Q  38 aaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 19163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 28662 - 28784
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  28662 aaaatggggggaaggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaa 28761  T
Q  109 cacgaggaccaaaagtgtaatta 131  Q
    ||||| |||||||||||||||||    
T  28762 cacgatgaccaaaagtgtaatta 28784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 42570 - 42705
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||  | ||||||| ||||||    
T  42570 tggagaataaaatgggg-gtaggacgaaaaatgaaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcagaatcagtttcctgagta 42668  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    | ||||||||||||| |||||||| ||||||| ||||    
T  42669 gaccaaaacacgaggnccaaaagtataattaagccta 42705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 42295 - 42168
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||| ||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||| || ||||||||||| ||| ||||||    
T  42295 aaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaatggcaggatcagtttcgtgattagaccaaaa 42196  T
Q  109 cacgaggaccaaaagtgtaattaaacct 136  Q
    |||||| || ||||||||||||||||||    
T  42195 cacgagaactaaaagtgtaattaaacct 42168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 701 - 570
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagta 100  Q
    ||||| || ||||||| |||  |||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||| || || |||||||||||    
T  701 tggaggatcaaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcattttcgtgagta 602  T
Q  101 ggccaaaacacgaggaccaaaagtgtaattaa 132  Q
    |||||||||||||||| |||||||||||||||    
T  601 ggccaaaacacgaggatcaaaagtgtaattaa 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 61877 - 62002
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||| ||   ||||||||| ||||||||||| | ||||| |||||||||||| ||||||    
T  61877 aaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttcgtgagtagaccaaaa 61976  T
Q  109 cacgaggaccaaaagtgtaattaaac 134  Q
    |||||||| |||||||||||||||||    
T  61977 cacgaggatcaaaagtgtaattaaac 62002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 61102 - 61026
Alignment:
Q  61 tttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 137  Q
    |||||||| |||||||| |||| || || ||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagccta 61026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 8451 - 8554
Alignment:
Q  32 tgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaatta 131  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||||| | |||||||||||| ||||| |||||||| || |||||||||||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaatta 8550  T
Q  132 aacc 135  Q
    ||||    
T  8551 aacc 8554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 16915 - 17024
Alignment:
Q  9 aaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaa 108  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||| |||  || |||||||||||||| | |||||    
T  16915 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcgggatcagtttcgtgagtaagtcaaaa 17014  T
Q  109 cacgaggacc 118  Q
    ||||||||||    
T  17015 cacgaggacc 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16630 - 16564
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttc 67  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16630 tggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttc 16564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 565 - 454
Alignment:
Q  19 gtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggacc 118  Q
    ||||||||||||||||||||||||||||| |||||||||  || |||| |||||||||||  || ||||| |||||||||||||||||||||||| ||||    
T  565 gtaggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttcgtgagtaggccaaaacacgaagacc 466  T
Q  119 aaaagtgtaatta 131  Q
    |||| ||||||||    
T  465 aaaa-tgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7699 - 7778
Alignment:
Q  1 tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaaggg 80  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||||||    
T  7699 tggaggataaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaaggg 7778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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